Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45667.t1 | XP_003606916.1 | 98.9 | 91 | 1 | 0 | 1 | 91 | 1 | 91 | 2.30E-42 | 182.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45667.t1 | P49310 | 83.5 | 91 | 15 | 0 | 1 | 91 | 1 | 91 | 2.9e-38 | 159.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45667.t1 | G7JG73 | 98.9 | 91 | 1 | 0 | 1 | 91 | 1 | 91 | 1.6e-42 | 182.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05548 | MS.gene45667 | 0.809272 | 2.05E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45667.t1 | MTR_4g070140 | 97.895 | 190 | 3 | 1 | 1 | 189 | 1 | 190 | 1.08e-109 | 311 |
MS.gene45667.t1 | MTR_4g070190 | 88.372 | 86 | 10 | 0 | 1 | 86 | 1 | 86 | 4.36e-52 | 164 |
MS.gene45667.t1 | MTR_4g070080 | 83.168 | 101 | 17 | 0 | 4 | 104 | 2 | 102 | 1.22e-47 | 152 |
MS.gene45667.t1 | MTR_4g070080 | 83.673 | 98 | 16 | 0 | 4 | 101 | 2 | 99 | 1.40e-46 | 150 |
MS.gene45667.t1 | MTR_3g025880 | 47.059 | 85 | 45 | 0 | 3 | 87 | 39 | 123 | 8.33e-23 | 94.7 |
MS.gene45667.t1 | MTR_3g075500 | 51.852 | 81 | 39 | 0 | 8 | 88 | 206 | 286 | 9.18e-23 | 92.8 |
MS.gene45667.t1 | MTR_3g075500 | 39.506 | 81 | 49 | 0 | 9 | 89 | 110 | 190 | 3.15e-11 | 61.2 |
MS.gene45667.t1 | MTR_4g109540 | 47.500 | 80 | 42 | 0 | 9 | 88 | 43 | 122 | 2.96e-22 | 90.9 |
MS.gene45667.t1 | MTR_7g013730 | 44.578 | 83 | 46 | 0 | 9 | 91 | 41 | 123 | 8.51e-22 | 89.4 |
MS.gene45667.t1 | MTR_4g109540 | 48.052 | 77 | 40 | 0 | 12 | 88 | 54 | 130 | 1.09e-20 | 87.0 |
MS.gene45667.t1 | MTR_3g084040 | 50.633 | 79 | 38 | 1 | 9 | 87 | 37 | 114 | 1.56e-20 | 83.6 |
MS.gene45667.t1 | MTR_4g104470 | 50.617 | 81 | 40 | 0 | 8 | 88 | 216 | 296 | 2.11e-20 | 86.7 |
MS.gene45667.t1 | MTR_4g104470 | 40.964 | 83 | 49 | 0 | 8 | 90 | 122 | 204 | 4.90e-14 | 68.9 |
MS.gene45667.t1 | MTR_7g013740 | 43.750 | 80 | 45 | 0 | 9 | 88 | 41 | 120 | 5.80e-19 | 79.3 |
MS.gene45667.t1 | MTR_3g075500 | 55.385 | 65 | 29 | 0 | 8 | 72 | 206 | 270 | 1.59e-18 | 80.9 |
MS.gene45667.t1 | MTR_3g075500 | 39.506 | 81 | 49 | 0 | 9 | 89 | 110 | 190 | 3.31e-11 | 60.8 |
MS.gene45667.t1 | MTR_1g064230 | 50.575 | 87 | 43 | 0 | 2 | 88 | 190 | 276 | 3.16e-18 | 80.5 |
MS.gene45667.t1 | MTR_1g064230 | 36.283 | 113 | 71 | 1 | 9 | 120 | 85 | 197 | 5.10e-11 | 60.5 |
MS.gene45667.t1 | MTR_3g080130 | 40.244 | 82 | 49 | 0 | 9 | 90 | 37 | 118 | 3.26e-18 | 77.0 |
MS.gene45667.t1 | MTR_3g014000 | 40.909 | 110 | 46 | 4 | 1 | 103 | 31 | 128 | 2.55e-17 | 75.1 |
MS.gene45667.t1 | MTR_7g105260 | 40.741 | 81 | 48 | 0 | 6 | 86 | 30 | 110 | 5.01e-17 | 74.3 |
MS.gene45667.t1 | MTR_3g116130 | 46.053 | 76 | 40 | 1 | 9 | 84 | 30 | 104 | 2.66e-16 | 75.1 |
MS.gene45667.t1 | MTR_4g035310 | 41.000 | 100 | 52 | 4 | 5 | 99 | 12 | 109 | 2.91e-16 | 75.1 |
MS.gene45667.t1 | MTR_4g035310 | 41.000 | 100 | 52 | 4 | 5 | 99 | 12 | 109 | 3.72e-16 | 74.7 |
MS.gene45667.t1 | MTR_1g045510 | 41.463 | 82 | 48 | 0 | 4 | 85 | 200 | 281 | 1.55e-15 | 73.2 |
MS.gene45667.t1 | MTR_3g055990 | 37.975 | 79 | 47 | 1 | 9 | 87 | 7 | 83 | 1.97e-15 | 73.9 |
MS.gene45667.t1 | MTR_3g055990 | 31.126 | 151 | 87 | 4 | 9 | 144 | 107 | 255 | 7.75e-11 | 60.5 |
MS.gene45667.t1 | MTR_3g055990 | 37.975 | 79 | 47 | 1 | 9 | 87 | 7 | 83 | 2.07e-15 | 73.9 |
MS.gene45667.t1 | MTR_3g055990 | 31.126 | 151 | 87 | 4 | 9 | 144 | 107 | 255 | 8.23e-11 | 60.5 |
MS.gene45667.t1 | MTR_3g116130 | 46.053 | 76 | 40 | 1 | 9 | 84 | 30 | 104 | 2.13e-15 | 73.6 |
MS.gene45667.t1 | MTR_3g084040 | 47.297 | 74 | 34 | 2 | 1 | 74 | 33 | 101 | 2.38e-15 | 68.9 |
MS.gene45667.t1 | MTR_3g092490 | 30.769 | 169 | 92 | 4 | 9 | 153 | 27 | 194 | 2.46e-15 | 72.0 |
MS.gene45667.t1 | MTR_5g097580 | 37.975 | 79 | 47 | 1 | 9 | 87 | 7 | 83 | 2.53e-15 | 73.6 |
MS.gene45667.t1 | MTR_5g097580 | 32.258 | 93 | 62 | 1 | 9 | 101 | 107 | 198 | 4.47e-11 | 61.2 |
MS.gene45667.t1 | MTR_5g097580 | 37.975 | 79 | 47 | 1 | 9 | 87 | 7 | 83 | 2.61e-15 | 73.6 |
MS.gene45667.t1 | MTR_5g097580 | 32.258 | 93 | 62 | 1 | 9 | 101 | 107 | 198 | 4.10e-11 | 61.2 |
MS.gene45667.t1 | MTR_7g117495 | 46.053 | 76 | 40 | 1 | 9 | 84 | 19 | 93 | 4.65e-15 | 71.2 |
MS.gene45667.t1 | MTR_7g117495 | 46.053 | 76 | 40 | 1 | 9 | 84 | 19 | 93 | 6.47e-15 | 70.9 |
MS.gene45667.t1 | MTR_3g092490 | 28.485 | 165 | 98 | 3 | 9 | 170 | 27 | 174 | 1.07e-14 | 70.5 |
MS.gene45667.t1 | MTR_2g096560 | 39.024 | 82 | 50 | 0 | 9 | 90 | 8 | 89 | 1.10e-14 | 66.6 |
MS.gene45667.t1 | MTR_2g026180 | 39.241 | 79 | 46 | 1 | 9 | 87 | 5 | 81 | 1.18e-14 | 71.6 |
MS.gene45667.t1 | MTR_2g026180 | 33.607 | 122 | 71 | 3 | 9 | 120 | 107 | 228 | 3.43e-11 | 61.6 |
MS.gene45667.t1 | MTR_5g064120 | 44.737 | 76 | 41 | 1 | 9 | 84 | 17 | 91 | 1.23e-14 | 70.5 |
MS.gene45667.t1 | MTR_3g092490 | 45.000 | 80 | 43 | 1 | 9 | 88 | 27 | 105 | 1.59e-14 | 68.6 |
MS.gene45667.t1 | MTR_8g024520 | 44.737 | 76 | 41 | 1 | 9 | 84 | 26 | 100 | 2.12e-14 | 70.1 |
MS.gene45667.t1 | MTR_8g024520 | 44.737 | 76 | 41 | 1 | 9 | 84 | 26 | 100 | 2.16e-14 | 70.1 |
MS.gene45667.t1 | MTR_1g073690 | 35.443 | 79 | 49 | 1 | 9 | 87 | 7 | 83 | 2.17e-14 | 70.9 |
MS.gene45667.t1 | MTR_1g073690 | 33.117 | 154 | 89 | 5 | 9 | 151 | 113 | 263 | 6.87e-12 | 63.5 |
MS.gene45667.t1 | MTR_4g117350 | 37.500 | 96 | 57 | 1 | 1 | 96 | 67 | 159 | 5.57e-14 | 66.6 |
MS.gene45667.t1 | MTR_6g004810 | 38.095 | 84 | 50 | 1 | 9 | 92 | 46 | 127 | 1.17e-13 | 68.6 |
MS.gene45667.t1 | MTR_3g082650 | 36.585 | 82 | 50 | 1 | 9 | 90 | 19 | 98 | 2.36e-13 | 67.4 |
MS.gene45667.t1 | MTR_3g082650 | 33.333 | 138 | 85 | 2 | 9 | 146 | 107 | 237 | 2.71e-13 | 67.4 |
MS.gene45667.t1 | MTR_7g099940 | 37.931 | 87 | 54 | 0 | 1 | 87 | 28 | 114 | 4.07e-13 | 63.9 |
MS.gene45667.t1 | MTR_5g023060 | 32.386 | 176 | 98 | 6 | 10 | 170 | 133 | 302 | 1.18e-12 | 65.1 |
MS.gene45667.t1 | MTR_6g477870 | 38.750 | 80 | 49 | 0 | 9 | 88 | 96 | 175 | 1.37e-12 | 63.5 |
MS.gene45667.t1 | MTR_4g081520 | 38.298 | 94 | 52 | 2 | 11 | 101 | 54 | 144 | 2.30e-12 | 62.0 |
MS.gene45667.t1 | MTR_5g017280 | 41.250 | 80 | 43 | 2 | 9 | 87 | 5 | 81 | 3.13e-12 | 64.3 |
MS.gene45667.t1 | MTR_5g017280 | 41.250 | 80 | 43 | 2 | 9 | 87 | 5 | 81 | 3.13e-12 | 64.3 |
MS.gene45667.t1 | MTR_4g117350 | 40.278 | 72 | 40 | 1 | 1 | 72 | 67 | 135 | 6.87e-12 | 60.5 |
MS.gene45667.t1 | MTR_4g036415 | 44.444 | 72 | 40 | 0 | 10 | 81 | 453 | 524 | 1.05e-11 | 63.2 |
MS.gene45667.t1 | MTR_4g063560 | 39.726 | 73 | 44 | 0 | 9 | 81 | 34 | 106 | 1.23e-11 | 59.3 |
MS.gene45667.t1 | MTR_1g092860 | 35.870 | 92 | 56 | 1 | 9 | 97 | 193 | 284 | 1.34e-11 | 62.0 |
MS.gene45667.t1 | MTR_3g065190 | 39.175 | 97 | 58 | 1 | 3 | 98 | 107 | 203 | 2.29e-11 | 62.0 |
MS.gene45667.t1 | MTR_2g026180 | 33.607 | 122 | 71 | 3 | 9 | 120 | 37 | 158 | 2.35e-11 | 62.0 |
MS.gene45667.t1 | MTR_3g103420 | 29.851 | 134 | 88 | 2 | 9 | 137 | 118 | 250 | 2.70e-11 | 61.6 |
MS.gene45667.t1 | MTR_4g113150 | 39.837 | 123 | 65 | 6 | 10 | 126 | 9 | 128 | 3.90e-11 | 61.2 |
MS.gene45667.t1 | MTR_5g044970 | 36.957 | 92 | 58 | 0 | 10 | 101 | 12 | 103 | 4.15e-11 | 59.3 |
MS.gene45667.t1 | MTR_4g113150 | 39.837 | 123 | 65 | 6 | 10 | 126 | 9 | 128 | 4.73e-11 | 61.2 |
MS.gene45667.t1 | MTR_3g029580 | 38.356 | 73 | 45 | 0 | 9 | 81 | 33 | 105 | 8.66e-11 | 57.8 |
MS.gene45667.t1 | MTR_8g463890 | 35.955 | 89 | 55 | 2 | 9 | 97 | 74 | 160 | 9.32e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45667.t1 | AT4G39260 | 77.778 | 90 | 20 | 0 | 4 | 93 | 2 | 91 | 4.88e-48 | 152 |
MS.gene45667.t1 | AT2G21660 | 78.824 | 85 | 18 | 0 | 1 | 85 | 1 | 85 | 3.73e-45 | 147 |
MS.gene45667.t1 | AT2G21660 | 78.824 | 85 | 18 | 0 | 1 | 85 | 1 | 85 | 6.23e-45 | 147 |
MS.gene45667.t1 | AT4G39260 | 75.610 | 82 | 20 | 0 | 4 | 85 | 2 | 83 | 2.48e-42 | 140 |
MS.gene45667.t1 | AT4G39260 | 62.016 | 129 | 27 | 1 | 4 | 132 | 2 | 108 | 6.11e-36 | 122 |
MS.gene45667.t1 | AT4G39260 | 76.119 | 67 | 16 | 0 | 4 | 70 | 2 | 68 | 3.71e-34 | 117 |
MS.gene45667.t1 | AT3G26420 | 54.167 | 96 | 43 | 1 | 3 | 98 | 2 | 96 | 3.52e-31 | 114 |
MS.gene45667.t1 | AT4G13850 | 54.217 | 83 | 38 | 0 | 9 | 91 | 36 | 118 | 3.72e-25 | 95.9 |
MS.gene45667.t1 | AT3G23830 | 52.475 | 101 | 43 | 1 | 9 | 109 | 36 | 131 | 7.31e-24 | 92.0 |
MS.gene45667.t1 | AT3G23830 | 52.475 | 101 | 43 | 1 | 9 | 109 | 36 | 131 | 7.31e-24 | 92.0 |
MS.gene45667.t1 | AT5G04280 | 47.475 | 99 | 47 | 1 | 9 | 102 | 8 | 106 | 8.91e-24 | 95.9 |
MS.gene45667.t1 | AT4G13850 | 56.566 | 99 | 43 | 0 | 9 | 107 | 36 | 134 | 1.42e-23 | 91.3 |
MS.gene45667.t1 | AT4G13850 | 57.426 | 101 | 43 | 0 | 9 | 109 | 36 | 136 | 2.74e-23 | 90.9 |
MS.gene45667.t1 | AT4G13850 | 56.383 | 94 | 40 | 1 | 9 | 101 | 36 | 129 | 3.85e-23 | 89.7 |
MS.gene45667.t1 | AT5G61030 | 49.367 | 79 | 40 | 0 | 9 | 87 | 41 | 119 | 1.91e-22 | 92.4 |
MS.gene45667.t1 | AT5G61030 | 49.367 | 79 | 40 | 0 | 9 | 87 | 41 | 119 | 1.91e-22 | 92.4 |
MS.gene45667.t1 | AT2G21690 | 50.000 | 90 | 40 | 1 | 3 | 87 | 2 | 91 | 2.56e-21 | 84.7 |
MS.gene45667.t1 | AT4G24770 | 47.561 | 82 | 43 | 0 | 8 | 89 | 244 | 325 | 1.54e-20 | 87.4 |
MS.gene45667.t1 | AT4G24770 | 45.783 | 83 | 45 | 0 | 7 | 89 | 149 | 231 | 8.76e-16 | 74.3 |
MS.gene45667.t1 | AT4G24770 | 47.561 | 82 | 43 | 0 | 8 | 89 | 244 | 325 | 1.54e-20 | 87.4 |
MS.gene45667.t1 | AT4G24770 | 45.783 | 83 | 45 | 0 | 7 | 89 | 149 | 231 | 8.76e-16 | 74.3 |
MS.gene45667.t1 | AT5G06210 | 44.318 | 88 | 49 | 0 | 6 | 93 | 32 | 119 | 1.80e-20 | 83.6 |
MS.gene45667.t1 | AT5G50250 | 48.193 | 83 | 43 | 0 | 5 | 87 | 204 | 286 | 1.05e-19 | 84.7 |
MS.gene45667.t1 | AT5G50250 | 44.578 | 83 | 46 | 0 | 7 | 89 | 112 | 194 | 1.89e-15 | 72.8 |
MS.gene45667.t1 | AT3G53460 | 45.783 | 83 | 45 | 0 | 9 | 91 | 258 | 340 | 1.83e-19 | 84.7 |
MS.gene45667.t1 | AT3G53460 | 45.783 | 83 | 45 | 0 | 9 | 91 | 258 | 340 | 1.83e-19 | 84.7 |
MS.gene45667.t1 | AT3G53460 | 45.783 | 83 | 45 | 0 | 9 | 91 | 258 | 340 | 1.83e-19 | 84.7 |
MS.gene45667.t1 | AT2G37220 | 45.679 | 81 | 44 | 0 | 9 | 89 | 205 | 285 | 2.54e-19 | 83.6 |
MS.gene45667.t1 | AT3G53460 | 45.783 | 83 | 45 | 0 | 9 | 91 | 279 | 361 | 2.59e-19 | 84.3 |
MS.gene45667.t1 | AT1G60650 | 42.169 | 83 | 48 | 0 | 5 | 87 | 9 | 91 | 3.74e-19 | 83.2 |
MS.gene45667.t1 | AT1G60650 | 42.169 | 83 | 48 | 0 | 5 | 87 | 9 | 91 | 3.74e-19 | 83.2 |
MS.gene45667.t1 | AT1G74230 | 52.688 | 93 | 39 | 2 | 1 | 93 | 31 | 118 | 4.99e-19 | 82.8 |
MS.gene45667.t1 | AT3G07810 | 41.772 | 79 | 44 | 1 | 9 | 87 | 7 | 83 | 2.40e-17 | 79.3 |
MS.gene45667.t1 | AT3G07810 | 32.847 | 137 | 73 | 4 | 9 | 130 | 109 | 241 | 1.66e-11 | 62.4 |
MS.gene45667.t1 | AT3G07810 | 41.772 | 79 | 44 | 1 | 9 | 87 | 7 | 83 | 2.48e-17 | 79.3 |
MS.gene45667.t1 | AT3G07810 | 32.847 | 137 | 73 | 4 | 9 | 130 | 109 | 241 | 1.63e-11 | 62.4 |
MS.gene45667.t1 | AT1G76460 | 48.684 | 76 | 38 | 1 | 9 | 84 | 25 | 99 | 4.94e-17 | 77.4 |
MS.gene45667.t1 | AT1G22330 | 44.118 | 102 | 51 | 3 | 9 | 105 | 18 | 118 | 9.04e-17 | 76.6 |
MS.gene45667.t1 | AT1G18630 | 46.154 | 78 | 42 | 0 | 9 | 86 | 37 | 114 | 1.37e-16 | 73.6 |
MS.gene45667.t1 | AT5G47320 | 46.753 | 77 | 41 | 0 | 9 | 85 | 32 | 108 | 1.99e-16 | 74.3 |
MS.gene45667.t1 | AT4G26650 | 34.286 | 105 | 67 | 1 | 9 | 113 | 13 | 115 | 2.04e-16 | 76.6 |
MS.gene45667.t1 | AT4G26650 | 34.286 | 105 | 67 | 1 | 9 | 113 | 16 | 118 | 2.09e-16 | 76.6 |
MS.gene45667.t1 | AT4G14300 | 40.506 | 79 | 45 | 1 | 9 | 87 | 7 | 83 | 2.95e-16 | 76.3 |
MS.gene45667.t1 | AT4G14300 | 40.506 | 79 | 45 | 1 | 9 | 87 | 7 | 83 | 2.95e-16 | 76.3 |
MS.gene45667.t1 | AT1G20880 | 46.053 | 76 | 40 | 1 | 9 | 84 | 25 | 99 | 5.92e-16 | 74.3 |
MS.gene45667.t1 | AT1G20880 | 46.053 | 76 | 40 | 1 | 9 | 84 | 25 | 99 | 5.92e-16 | 74.3 |
MS.gene45667.t1 | AT1G20880 | 46.053 | 76 | 40 | 1 | 9 | 84 | 25 | 99 | 5.92e-16 | 74.3 |
MS.gene45667.t1 | AT3G46020 | 42.857 | 77 | 44 | 0 | 9 | 85 | 8 | 84 | 1.70e-15 | 69.3 |
MS.gene45667.t1 | AT1G22910 | 40.404 | 99 | 54 | 3 | 5 | 99 | 9 | 106 | 1.95e-15 | 72.4 |
MS.gene45667.t1 | AT2G33410 | 39.241 | 79 | 46 | 1 | 9 | 87 | 7 | 83 | 2.38e-15 | 73.6 |
MS.gene45667.t1 | AT2G33410 | 34.177 | 79 | 51 | 1 | 9 | 87 | 111 | 188 | 9.37e-11 | 60.1 |
MS.gene45667.t1 | AT2G46780 | 46.053 | 76 | 40 | 1 | 9 | 84 | 23 | 97 | 2.55e-15 | 73.2 |
MS.gene45667.t1 | AT2G46780 | 46.053 | 76 | 40 | 1 | 9 | 84 | 23 | 97 | 2.55e-15 | 73.2 |
MS.gene45667.t1 | AT1G22910 | 40.404 | 99 | 54 | 3 | 5 | 99 | 9 | 106 | 2.67e-15 | 72.0 |
MS.gene45667.t1 | AT3G13224 | 38.462 | 91 | 50 | 2 | 6 | 92 | 4 | 92 | 3.83e-15 | 72.8 |
MS.gene45667.t1 | AT3G13224 | 32.955 | 88 | 58 | 1 | 3 | 89 | 94 | 181 | 8.89e-12 | 63.2 |
MS.gene45667.t1 | AT3G13224 | 39.286 | 84 | 49 | 1 | 9 | 92 | 20 | 101 | 4.42e-15 | 72.4 |
MS.gene45667.t1 | AT3G13224 | 32.955 | 88 | 58 | 1 | 3 | 89 | 103 | 190 | 2.71e-12 | 64.7 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 5.45e-15 | 72.4 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 5.45e-15 | 72.4 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 5.45e-15 | 72.4 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 5.45e-15 | 72.4 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 5.45e-15 | 72.4 |
MS.gene45667.t1 | AT1G33470 | 43.421 | 76 | 42 | 1 | 9 | 84 | 8 | 82 | 6.02e-15 | 70.9 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 6.78e-15 | 72.4 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 6.78e-15 | 72.4 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 6.78e-15 | 72.4 |
MS.gene45667.t1 | AT5G55550 | 33.981 | 103 | 66 | 1 | 9 | 111 | 7 | 107 | 6.78e-15 | 72.4 |
MS.gene45667.t1 | AT1G33470 | 43.421 | 76 | 42 | 1 | 9 | 84 | 8 | 82 | 6.87e-15 | 70.9 |
MS.gene45667.t1 | AT1G33470 | 43.421 | 76 | 42 | 1 | 9 | 84 | 8 | 82 | 7.32e-15 | 70.9 |
MS.gene45667.t1 | AT1G17640 | 42.500 | 80 | 44 | 1 | 9 | 88 | 67 | 144 | 1.18e-14 | 71.2 |
MS.gene45667.t1 | AT1G17640 | 42.500 | 80 | 44 | 1 | 9 | 88 | 67 | 144 | 1.18e-14 | 71.2 |
MS.gene45667.t1 | AT1G17640 | 42.500 | 80 | 44 | 1 | 9 | 88 | 67 | 144 | 1.18e-14 | 71.2 |
MS.gene45667.t1 | AT3G08000 | 43.678 | 87 | 43 | 2 | 9 | 92 | 42 | 125 | 1.64e-14 | 67.8 |
MS.gene45667.t1 | AT1G22910 | 40.404 | 99 | 54 | 3 | 5 | 99 | 9 | 106 | 1.88e-14 | 70.9 |
MS.gene45667.t1 | AT2G37510 | 45.946 | 74 | 40 | 0 | 9 | 82 | 35 | 108 | 2.29e-14 | 67.4 |
MS.gene45667.t1 | AT5G59865 | 44.304 | 79 | 44 | 0 | 11 | 89 | 29 | 107 | 3.94e-14 | 65.9 |
MS.gene45667.t1 | AT1G78260 | 43.210 | 81 | 44 | 2 | 5 | 84 | 13 | 92 | 5.21e-14 | 68.9 |
MS.gene45667.t1 | AT3G54770 | 43.421 | 76 | 42 | 1 | 9 | 84 | 18 | 92 | 6.25e-14 | 68.6 |
MS.gene45667.t1 | AT3G54770 | 43.421 | 76 | 42 | 1 | 9 | 84 | 18 | 92 | 7.88e-14 | 68.2 |
MS.gene45667.t1 | AT1G78260 | 43.421 | 76 | 42 | 1 | 9 | 84 | 18 | 92 | 8.98e-14 | 68.2 |
MS.gene45667.t1 | AT5G19960 | 35.897 | 117 | 66 | 2 | 10 | 126 | 9 | 116 | 2.40e-13 | 67.4 |
MS.gene45667.t1 | AT5G53720 | 42.683 | 82 | 46 | 1 | 3 | 84 | 4 | 84 | 2.63e-13 | 63.5 |
MS.gene45667.t1 | AT5G40490 | 38.542 | 96 | 57 | 1 | 9 | 104 | 43 | 136 | 4.52e-13 | 67.0 |
MS.gene45667.t1 | AT1G60000 | 40.244 | 82 | 49 | 0 | 4 | 85 | 173 | 254 | 4.71e-13 | 65.9 |
MS.gene45667.t1 | AT5G55550 | 40.278 | 72 | 41 | 1 | 9 | 80 | 7 | 76 | 5.18e-13 | 67.0 |
MS.gene45667.t1 | AT2G27330 | 29.670 | 91 | 63 | 1 | 11 | 100 | 24 | 114 | 6.01e-13 | 62.8 |
MS.gene45667.t1 | AT3G13224 | 39.286 | 84 | 49 | 1 | 9 | 92 | 20 | 101 | 6.13e-13 | 65.5 |
MS.gene45667.t1 | AT5G55550 | 40.278 | 72 | 41 | 1 | 9 | 80 | 7 | 76 | 6.62e-13 | 66.6 |
MS.gene45667.t1 | AT3G14100 | 42.308 | 78 | 45 | 0 | 7 | 84 | 143 | 220 | 7.20e-13 | 66.2 |
MS.gene45667.t1 | AT2G14160 | 39.286 | 84 | 32 | 2 | 1 | 66 | 1 | 83 | 8.22e-13 | 61.6 |
MS.gene45667.t1 | AT5G47620 | 36.709 | 79 | 48 | 1 | 9 | 87 | 7 | 83 | 8.51e-13 | 66.2 |
MS.gene45667.t1 | AT5G47620 | 36.709 | 79 | 48 | 1 | 9 | 87 | 7 | 83 | 8.51e-13 | 66.2 |
MS.gene45667.t1 | AT5G47620 | 36.709 | 79 | 48 | 1 | 9 | 87 | 7 | 83 | 8.51e-13 | 66.2 |
MS.gene45667.t1 | AT4G13860 | 40.541 | 74 | 44 | 0 | 9 | 82 | 4 | 77 | 1.51e-12 | 61.2 |
MS.gene45667.t1 | AT1G01080 | 41.772 | 79 | 41 | 2 | 7 | 83 | 211 | 286 | 2.12e-12 | 64.7 |
MS.gene45667.t1 | AT1G01080 | 41.772 | 79 | 41 | 2 | 7 | 83 | 212 | 287 | 2.13e-12 | 64.7 |
MS.gene45667.t1 | AT1G54080 | 42.308 | 78 | 45 | 0 | 7 | 84 | 147 | 224 | 3.41e-12 | 64.3 |
MS.gene45667.t1 | AT3G06970 | 27.660 | 141 | 95 | 3 | 9 | 148 | 13 | 147 | 6.14e-12 | 63.5 |
MS.gene45667.t1 | AT5G53680 | 46.377 | 69 | 36 | 1 | 9 | 77 | 14 | 81 | 6.19e-12 | 61.6 |
MS.gene45667.t1 | AT5G51300 | 30.345 | 145 | 91 | 3 | 7 | 150 | 479 | 614 | 8.61e-12 | 63.5 |
MS.gene45667.t1 | AT5G51300 | 30.345 | 145 | 91 | 3 | 7 | 150 | 479 | 614 | 8.61e-12 | 63.5 |
MS.gene45667.t1 | AT5G51300 | 30.345 | 145 | 91 | 3 | 7 | 150 | 479 | 614 | 8.61e-12 | 63.5 |
MS.gene45667.t1 | AT5G04280 | 47.059 | 68 | 31 | 1 | 40 | 102 | 1 | 68 | 1.16e-11 | 62.4 |
MS.gene45667.t1 | AT5G04280 | 47.059 | 68 | 31 | 1 | 40 | 102 | 1 | 68 | 1.16e-11 | 62.4 |
MS.gene45667.t1 | AT5G04280 | 47.059 | 68 | 31 | 1 | 40 | 102 | 1 | 68 | 1.16e-11 | 62.4 |
MS.gene45667.t1 | AT5G04280 | 47.059 | 68 | 31 | 1 | 40 | 102 | 1 | 68 | 1.16e-11 | 62.4 |
MS.gene45667.t1 | AT5G47620 | 37.500 | 72 | 43 | 1 | 9 | 80 | 7 | 76 | 1.20e-11 | 62.8 |
MS.gene45667.t1 | AT4G27000 | 43.243 | 74 | 41 | 1 | 7 | 79 | 172 | 245 | 2.13e-11 | 62.0 |
MS.gene45667.t1 | AT4G36960 | 36.782 | 87 | 53 | 1 | 6 | 90 | 1 | 87 | 4.17e-11 | 61.2 |
MS.gene45667.t1 | AT4G36960 | 36.782 | 87 | 53 | 1 | 6 | 90 | 1 | 87 | 4.17e-11 | 61.2 |
MS.gene45667.t1 | AT3G20930 | 35.000 | 80 | 52 | 0 | 9 | 88 | 283 | 362 | 5.20e-11 | 60.8 |
MS.gene45667.t1 | AT2G22090 | 38.043 | 92 | 54 | 3 | 5 | 95 | 100 | 189 | 8.56e-11 | 60.1 |
MS.gene45667.t1 | AT2G22090 | 38.043 | 92 | 54 | 3 | 5 | 95 | 100 | 189 | 9.15e-11 | 60.1 |
Find 92 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGGAAGATCAAGAGGTTT+TGG | 0.244628 | 4.4:-37772103 | MS.gene45667:CDS |
GGTGGAGGTGGTGGTGGTTA+TGG | 0.247285 | 4.4:-37771812 | MS.gene45667:CDS |
GGTGGCGGCGGTGGTGGATA+TGG | 0.307147 | 4.4:-37771953 | MS.gene45667:CDS |
GGTGGTGGCGGTTATGGTGG+AGG | 0.307721 | 4.4:-37771851 | MS.gene45667:CDS |
TATGGTGGCGGCGGTGGTTA+TGG | 0.314627 | 4.4:-37771935 | MS.gene45667:CDS |
GGAGGTGGTGGTGGTTATGG+TGG | 0.314652 | 4.4:-37771809 | MS.gene45667:CDS |
AGTGGTGGTGGTGGCGGTTA+TGG | 0.324812 | 4.4:-37771857 | MS.gene45667:CDS |
GTTATCAATGATCGTGAAAC+TGG | 0.330573 | 4.4:-37772121 | MS.gene45667:CDS |
GGTCGAGGTGGCGGCGGTGG+TGG | 0.344552 | 4.4:-37771959 | MS.gene45667:CDS |
GGAGGTGGTGACCGTGGTTA+TGG | 0.350450 | 4.4:-37771758 | MS.gene45667:CDS |
GGAGGTCGAGGTGGCGGCGG+TGG | 0.351610 | 4.4:-37771962 | MS.gene45667:CDS |
GCTTCGTCGGTGGTCTTGCT+TGG | 0.353153 | 4.4:-37772453 | MS.gene45667:CDS |
GTGCTGATAGCGGTGGAAAC+TGG | 0.354817 | 4.4:-37771697 | MS.gene45667:CDS |
GAGCAAGCCTTCTCTAAGTT+TGG | 0.374142 | 4.4:-37772409 | MS.gene45667:CDS |
GTGGTGGCGGTTATGGTGGA+GGG | 0.383697 | 4.4:-37771850 | MS.gene45667:CDS |
CGTGGATATGGTGGAGGTGG+TGG | 0.384415 | 4.4:-37771821 | MS.gene45667:CDS |
CTTCGTCGGTGGTCTTGCTT+GGG | 0.385202 | 4.4:-37772452 | MS.gene45667:CDS |
GGTGGTTATGGCGGAGGTGG+TGG | 0.401287 | 4.4:-37771923 | MS.gene45667:CDS |
GGTGGTAGAGACCGTGGATA+TGG | 0.401669 | 4.4:-37771785 | MS.gene45667:CDS |
GGTGGTGGTGGTTATGGTGG+AGG | 0.410493 | 4.4:-37771806 | MS.gene45667:CDS |
GGCGGAGGTGGTGGTGGCTA+TGG | 0.415407 | 4.4:-37771914 | MS.gene45667:CDS |
GGTGGTGGTGGCTATGGAGG+TGG | 0.416082 | 4.4:-37771908 | MS.gene45667:CDS |
CGTGGTTATGGTGGTGGAGG+TGG | 0.419917 | 4.4:-37771746 | MS.gene45667:CDS |
GGAGGAGGTCGAGGTGGCGG+CGG | 0.426267 | 4.4:-37771965 | MS.gene45667:CDS |
GGTGGATATGGTGGCGGCGG+TGG | 0.432939 | 4.4:-37771941 | MS.gene45667:CDS |
GGCGGTGGTTATGGCGGAGG+TGG | 0.433064 | 4.4:-37771926 | MS.gene45667:CDS |
GGAGGTGGTGGTGGCTATGG+AGG | 0.438729 | 4.4:-37771911 | MS.gene45667:CDS |
GGATATGGTGGAGGTGGTGG+TGG | 0.439317 | 4.4:-37771818 | MS.gene45667:CDS |
GGCCACCGATAGCCAAGCTC+TGG | 0.439871 | 4.4:-37772431 | MS.gene45667:CDS |
GGTTATGGCGGAGGTGGTGG+TGG | 0.443104 | 4.4:-37771920 | MS.gene45667:CDS |
GGTAGTGGTGGAGGAGGTCG+AGG | 0.455825 | 4.4:-37771974 | MS.gene45667:CDS |
GGCGGCGGTGGTGGATATGG+TGG | 0.462700 | 4.4:-37771950 | MS.gene45667:CDS |
GGTGGTGGTGGCGGTTATGG+TGG | 0.463200 | 4.4:-37771854 | MS.gene45667:CDS |
TGGTGGCGGTTATGGTGGAG+GGG | 0.468047 | 4.4:-37771849 | MS.gene45667:CDS |
GGTGGCGGTTATGGTGGAGG+GGG | 0.468567 | 4.4:-37771848 | MS.gene45667:CDS |
GGTGGAGGAGGTCGAGGTGG+CGG | 0.471160 | 4.4:-37771968 | MS.gene45667:CDS |
GGTTATGGTGGTGGAGGTGG+CGG | 0.475016 | 4.4:-37771743 | MS.gene45667:CDS |
AGAAGGCTTGCTCCAGAGCT+TGG | 0.478074 | 4.4:+37772419 | None:intergenic |
GGTGATCGTGGATATGGTGG+AGG | 0.478917 | 4.4:-37771827 | MS.gene45667:CDS |
CGTGGATATGGTGGTGGAGG+TGG | 0.479477 | 4.4:-37771773 | MS.gene45667:CDS |
GGCGGCGGTGGTTATGGCGG+AGG | 0.479896 | 4.4:-37771929 | MS.gene45667:CDS |
AGCAGAAGTGGTGGTGGTGG+CGG | 0.484704 | 4.4:-37771863 | MS.gene45667:CDS |
GGCGGTGGTGGATATGGTGG+CGG | 0.485442 | 4.4:-37771947 | MS.gene45667:CDS |
GAAGCTCAGTCCCGTGGTAG+TGG | 0.495918 | 4.4:-37771989 | MS.gene45667:CDS |
GGTGGTGGTTATGGTGGAGG+TGG | 0.498780 | 4.4:-37771803 | MS.gene45667:CDS |
CAAGACCACCGACGAAGCAC+CGG | 0.514431 | 4.4:+37772458 | None:intergenic |
CAGTCCCGTGGTAGTGGTGG+AGG | 0.515463 | 4.4:-37771983 | MS.gene45667:CDS |
GATCGCTACTCTCGCGGTGG+TGG | 0.518871 | 4.4:-37771719 | MS.gene45667:CDS |
GATCGTGGATATGGTGGAGG+TGG | 0.521221 | 4.4:-37771824 | MS.gene45667:CDS |
TCCCGTGGTAGTGGTGGAGG+AGG | 0.528218 | 4.4:-37771980 | MS.gene45667:CDS |
GGAGGTGGTGGTCGACGTGA+TGG | 0.531938 | 4.4:-37771893 | MS.gene45667:CDS |
GGTGACCGTGGTTATGGTGG+TGG | 0.532821 | 4.4:-37771752 | MS.gene45667:CDS |
TACAGCAGAAGTGGTGGTGG+TGG | 0.534700 | 4.4:-37771866 | MS.gene45667:CDS |
ACCTCCTCCACCACTACCAC+GGG | 0.543580 | 4.4:+37771979 | None:intergenic |
GACCGTGGTTATGGTGGTGG+AGG | 0.549033 | 4.4:-37771749 | MS.gene45667:CDS |
AATTGAAGAGATGAACGGTC+AGG | 0.551398 | 4.4:-37772041 | MS.gene45667:CDS |
GACCGTGGATATGGTGGTGG+AGG | 0.551656 | 4.4:-37771776 | MS.gene45667:CDS |
TGGTGAAATCACTGATTCCA+AGG | 0.553599 | 4.4:-37772389 | MS.gene45667:intron |
GGTGGTGGATATGGTGGCGG+CGG | 0.554336 | 4.4:-37771944 | MS.gene45667:CDS |
GGTGGCGGCGGTGGTTATGG+CGG | 0.555099 | 4.4:-37771932 | MS.gene45667:CDS |
GGTGGTGGCTATGGAGGTGG+TGG | 0.555533 | 4.4:-37771905 | MS.gene45667:CDS |
TTGCTCCAGAGCTTGGCTAT+CGG | 0.556107 | 4.4:+37772426 | None:intergenic |
AGAGACCGTGGATATGGTGG+TGG | 0.557634 | 4.4:-37771779 | MS.gene45667:CDS |
CGTGAAACTGGAAGATCAAG+AGG | 0.562850 | 4.4:-37772109 | MS.gene45667:CDS |
GCTCAGTCCCGTGGTAGTGG+TGG | 0.563419 | 4.4:-37771986 | MS.gene45667:CDS |
GGTGGTGGTCGACGTGATGG+TGG | 0.565795 | 4.4:-37771890 | MS.gene45667:CDS |
CGCGGTGGTGGTGCTGATAG+CGG | 0.567365 | 4.4:-37771707 | MS.gene45667:CDS |
GGCGGTGATCGCTACTCTCG+CGG | 0.570761 | 4.4:-37771725 | MS.gene45667:CDS |
CTCCAGAGCTTGGCTATCGG+TGG | 0.571940 | 4.4:+37772429 | None:intergenic |
GGTGGTGACCGTGGTTATGG+TGG | 0.575688 | 4.4:-37771755 | MS.gene45667:CDS |
GATTTCACCAAACTTAGAGA+AGG | 0.575852 | 4.4:+37772402 | None:intergenic |
GACCTCCTCCACCACTACCA+CGG | 0.582027 | 4.4:+37771978 | None:intergenic |
GGATACAGCAGAAGTGGTGG+TGG | 0.583391 | 4.4:-37771869 | MS.gene45667:CDS |
GTTGAGTACCGGTGCTTCGT+CGG | 0.588309 | 4.4:-37772466 | MS.gene45667:CDS |
AGTGGTGGAGGAGGTCGAGG+TGG | 0.601853 | 4.4:-37771971 | MS.gene45667:CDS |
CTGATAGCGGTGGAAACTGG+AGG | 0.605217 | 4.4:-37771694 | MS.gene45667:CDS |
ATGAACGGTCAGGATATTGA+CGG | 0.611489 | 4.4:-37772031 | MS.gene45667:CDS |
GAGTACCGGTGCTTCGTCGG+TGG | 0.614835 | 4.4:-37772463 | MS.gene45667:CDS |
ACGGTCAGGATATTGACGGC+AGG | 0.621480 | 4.4:-37772027 | MS.gene45667:CDS |
GTTCTTCTGATGTTGAGTAC+CGG | 0.622558 | 4.4:-37772477 | MS.gene45667:CDS |
GGTGGTGGAGGTGGTGACCG+TGG | 0.625086 | 4.4:-37771764 | MS.gene45667:CDS |
CACCTCCACCACCATATCCA+CGG | 0.628164 | 4.4:+37771774 | None:intergenic |
GGTAGAGACCGTGGATATGG+TGG | 0.628309 | 4.4:-37771782 | MS.gene45667:CDS |
TGATAGCGGTGGAAACTGGA+GGG | 0.650756 | 4.4:-37771693 | MS.gene45667:CDS |
GTGAATGAAGCTCAGTCCCG+TGG | 0.655571 | 4.4:-37771995 | MS.gene45667:CDS |
GGTGGAGGTGGTAGAGACCG+TGG | 0.658126 | 4.4:-37771791 | MS.gene45667:CDS |
GATGCAATTGAAGAGATGAA+CGG | 0.671848 | 4.4:-37772046 | MS.gene45667:CDS |
GATGGTGGATACAGCAGAAG+TGG | 0.672149 | 4.4:-37771875 | MS.gene45667:CDS |
CACCTCCACCACCATAACCA+CGG | 0.677931 | 4.4:+37771747 | None:intergenic |
GGTGATCGCTACTCTCGCGG+TGG | 0.687217 | 4.4:-37771722 | MS.gene45667:CDS |
GGTGGATACAGCAGAAGTGG+TGG | 0.687566 | 4.4:-37771872 | MS.gene45667:CDS |
GGTGGTGGTGCTGATAGCGG+TGG | 0.706620 | 4.4:-37771704 | MS.gene45667:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TGTGAATTTTCTTAGATCTG+AGG | - | chr4.4:37772011-37772030 | MS.gene45667:CDS | 30.0% |
!!! | ATCTGAGGTTATTTTTGTTC+AGG | - | chr4.4:37772026-37772045 | MS.gene45667:CDS | 30.0% |
ACCAAAAGAAGAAGATCGAT+CGG | - | chr4.4:37771951-37771970 | MS.gene45667:CDS | 35.0% | |
ATGAAGATGAACGTACCTAT+TGG | + | chr4.4:37771925-37771944 | None:intergenic | 35.0% | |
GATGCAATTGAAGAGATGAA+CGG | - | chr4.4:37772123-37772142 | MS.gene45667:CDS | 35.0% | |
GATTTCACCAAACTTAGAGA+AGG | + | chr4.4:37771770-37771789 | None:intergenic | 35.0% | |
GTTATCAATGATCGTGAAAC+TGG | - | chr4.4:37772048-37772067 | MS.gene45667:CDS | 35.0% | |
! | AAGATCGATCGGTTTCTATT+CGG | - | chr4.4:37771962-37771981 | MS.gene45667:CDS | 35.0% |
! | CTTTTGTTACTCACACCAAT+AGG | - | chr4.4:37771907-37771926 | MS.gene45667:CDS | 35.0% |
AATTGAAGAGATGAACGGTC+AGG | - | chr4.4:37772128-37772147 | MS.gene45667:intron | 40.0% | |
ATGAACGGTCAGGATATTGA+CGG | - | chr4.4:37772138-37772157 | MS.gene45667:intron | 40.0% | |
GTTCTTCTGATGTTGAGTAC+CGG | - | chr4.4:37771692-37771711 | MS.gene45667:CDS | 40.0% | |
! | ACCGATCGATCTTCTTCTTT+TGG | + | chr4.4:37771955-37771974 | None:intergenic | 40.0% |
! | ACTGGAAGATCAAGAGGTTT+TGG | - | chr4.4:37772066-37772085 | MS.gene45667:CDS | 40.0% |
!! | GATCGGTTTCTATTCGGTTT+TGG | - | chr4.4:37771968-37771987 | MS.gene45667:CDS | 40.0% |
!! | TGGTGAAATCACTGATTCCA+AGG | - | chr4.4:37771780-37771799 | MS.gene45667:CDS | 40.0% |
AATCCGAATCAGAATCCGCA+CGG | + | chr4.4:37771807-37771826 | None:intergenic | 45.0% | |
CGTGAAACTGGAAGATCAAG+AGG | - | chr4.4:37772060-37772079 | MS.gene45667:CDS | 45.0% | |
GAGCAAGCCTTCTCTAAGTT+TGG | - | chr4.4:37771760-37771779 | MS.gene45667:CDS | 45.0% | |
TTGCTCCAGAGCTTGGCTAT+CGG | + | chr4.4:37771746-37771765 | None:intergenic | 50.0% | |
!! | GATGGTGGATACAGCAGAAG+TGG | - | chr4.4:37772294-37772313 | MS.gene45667:intron | 50.0% |
!! | TGATAGCGGTGGAAACTGGA+GGG | - | chr4.4:37772476-37772495 | MS.gene45667:CDS | 50.0% |
ACGGTCAGGATATTGACGGC+AGG | - | chr4.4:37772142-37772161 | MS.gene45667:intron | 55.0% | |
AGAGACCGTGGATATGGTGG+TGG | - | chr4.4:37772390-37772409 | MS.gene45667:CDS | 55.0% | |
ATCAGAATCCGCACGGACCT+TGG | + | chr4.4:37771800-37771819 | None:intergenic | 55.0% | |
CACCTCCACCACCATAACCA+CGG | + | chr4.4:37772425-37772444 | None:intergenic | 55.0% | |
CACCTCCACCACCATATCCA+CGG | + | chr4.4:37772398-37772417 | None:intergenic | 55.0% | |
GGATACAGCAGAAGTGGTGG+TGG | - | chr4.4:37772300-37772319 | MS.gene45667:intron | 55.0% | |
GGTAGAGACCGTGGATATGG+TGG | - | chr4.4:37772387-37772406 | MS.gene45667:intron | 55.0% | |
GGTCCGTGCGGATTCTGATT+CGG | - | chr4.4:37771801-37771820 | MS.gene45667:CDS | 55.0% | |
GGTGATCGTGGATATGGTGG+AGG | - | chr4.4:37772342-37772361 | MS.gene45667:intron | 55.0% | |
GGTGGATACAGCAGAAGTGG+TGG | - | chr4.4:37772297-37772316 | MS.gene45667:intron | 55.0% | |
GGTGGTAGAGACCGTGGATA+TGG | - | chr4.4:37772384-37772403 | MS.gene45667:intron | 55.0% | |
GTGAATGAAGCTCAGTCCCG+TGG | - | chr4.4:37772174-37772193 | MS.gene45667:intron | 55.0% | |
! | AGAAGGCTTGCTCCAGAGCT+TGG | + | chr4.4:37771753-37771772 | None:intergenic | 55.0% |
! | CTTCGTCGGTGGTCTTGCTT+GGG | - | chr4.4:37771717-37771736 | MS.gene45667:CDS | 55.0% |
! | GATCGTGGATATGGTGGAGG+TGG | - | chr4.4:37772345-37772364 | MS.gene45667:intron | 55.0% |
!! | CACTGATTCCAAGGTCCGTG+CGG | - | chr4.4:37771789-37771808 | MS.gene45667:CDS | 55.0% |
!! | CTGATAGCGGTGGAAACTGG+AGG | - | chr4.4:37772475-37772494 | MS.gene45667:CDS | 55.0% |
!! | GTGCTGATAGCGGTGGAAAC+TGG | - | chr4.4:37772472-37772491 | MS.gene45667:CDS | 55.0% |
!! | GTTGAGTACCGGTGCTTCGT+CGG | - | chr4.4:37771703-37771722 | MS.gene45667:CDS | 55.0% |
!! | TACAGCAGAAGTGGTGGTGG+TGG | - | chr4.4:37772303-37772322 | MS.gene45667:intron | 55.0% |
ACCTCCTCCACCACTACCAC+GGG | + | chr4.4:37772193-37772212 | None:intergenic | 60.0% | |
CAAGACCACCGACGAAGCAC+CGG | + | chr4.4:37771714-37771733 | None:intergenic | 60.0% | |
CTCCAGAGCTTGGCTATCGG+TGG | + | chr4.4:37771743-37771762 | None:intergenic | 60.0% | |
GAAGCTCAGTCCCGTGGTAG+TGG | - | chr4.4:37772180-37772199 | MS.gene45667:intron | 60.0% | |
GACCTCCTCCACCACTACCA+CGG | + | chr4.4:37772194-37772213 | None:intergenic | 60.0% | |
GGAGGGGGTGATCGTGGATA+TGG | - | chr4.4:37772336-37772355 | MS.gene45667:intron | 60.0% | |
GGAGGTGGTGACCGTGGTTA+TGG | - | chr4.4:37772411-37772430 | MS.gene45667:CDS | 60.0% | |
GGGGGTGATCGTGGATATGG+TGG | - | chr4.4:37772339-37772358 | MS.gene45667:intron | 60.0% | |
GGTGACCGTGGTTATGGTGG+TGG | - | chr4.4:37772417-37772436 | MS.gene45667:CDS | 60.0% | |
GGTGGTGACCGTGGTTATGG+TGG | - | chr4.4:37772414-37772433 | MS.gene45667:CDS | 60.0% | |
! | CGTGGATATGGTGGAGGTGG+TGG | - | chr4.4:37772348-37772367 | MS.gene45667:intron | 60.0% |
! | GCTTCGTCGGTGGTCTTGCT+TGG | - | chr4.4:37771716-37771735 | MS.gene45667:CDS | 60.0% |
! | GGATATGGTGGAGGTGGTGG+TGG | - | chr4.4:37772351-37772370 | MS.gene45667:intron | 60.0% |
! | GGTGGTGGTTATGGTGGAGG+TGG | - | chr4.4:37772366-37772385 | MS.gene45667:intron | 60.0% |
! | TATGGTGGAGGGGGTGATCG+TGG | - | chr4.4:37772330-37772349 | MS.gene45667:intron | 60.0% |
!! | AGCAGAAGTGGTGGTGGTGG+CGG | - | chr4.4:37772306-37772325 | MS.gene45667:intron | 60.0% |
!! | AGTGGTGGTGGTGGCGGTTA+TGG | - | chr4.4:37772312-37772331 | MS.gene45667:intron | 60.0% |
!! | CGTGGATATGGTGGTGGAGG+TGG | - | chr4.4:37772396-37772415 | MS.gene45667:CDS | 60.0% |
!! | CGTGGTTATGGTGGTGGAGG+TGG | - | chr4.4:37772423-37772442 | MS.gene45667:CDS | 60.0% |
!! | GACCGTGGATATGGTGGTGG+AGG | - | chr4.4:37772393-37772412 | MS.gene45667:CDS | 60.0% |
!! | GACCGTGGTTATGGTGGTGG+AGG | - | chr4.4:37772420-37772439 | MS.gene45667:CDS | 60.0% |
!! | GGAGGTGGTGGTGGTTATGG+TGG | - | chr4.4:37772360-37772379 | MS.gene45667:intron | 60.0% |
!! | GGTGGAGGTGGTGGTGGTTA+TGG | - | chr4.4:37772357-37772376 | MS.gene45667:intron | 60.0% |
!! | GGTGGTGGTGGTTATGGTGG+AGG | - | chr4.4:37772363-37772382 | MS.gene45667:intron | 60.0% |
!! | GGTTATGGTGGTGGAGGTGG+CGG | - | chr4.4:37772426-37772445 | MS.gene45667:CDS | 60.0% |
!! | GTGGTGGCGGTTATGGTGGA+GGG | - | chr4.4:37772319-37772338 | MS.gene45667:intron | 60.0% |
!! | TATGGTGGCGGCGGTGGTTA+TGG | - | chr4.4:37772234-37772253 | MS.gene45667:intron | 60.0% |
!! | TGGTGGCGGTTATGGTGGAG+GGG | - | chr4.4:37772320-37772339 | MS.gene45667:intron | 60.0% |
GATCGCTACTCTCGCGGTGG+TGG | - | chr4.4:37772450-37772469 | MS.gene45667:CDS | 65.0% | |
GGCCACCGATAGCCAAGCTC+TGG | - | chr4.4:37771738-37771757 | MS.gene45667:CDS | 65.0% | |
GGCGGTGATCGCTACTCTCG+CGG | - | chr4.4:37772444-37772463 | MS.gene45667:CDS | 65.0% | |
GGTGATCGCTACTCTCGCGG+TGG | - | chr4.4:37772447-37772466 | MS.gene45667:CDS | 65.0% | |
GGTGGAGGTGGTAGAGACCG+TGG | - | chr4.4:37772378-37772397 | MS.gene45667:intron | 65.0% | |
! | AGTGGTGGAGGAGGTCGAGG+TGG | - | chr4.4:37772198-37772217 | MS.gene45667:intron | 65.0% |
! | GGAGGTGGTGGTCGACGTGA+TGG | - | chr4.4:37772276-37772295 | MS.gene45667:intron | 65.0% |
! | GGTAGTGGTGGAGGAGGTCG+AGG | - | chr4.4:37772195-37772214 | MS.gene45667:intron | 65.0% |
! | GGTGGCGGTTATGGTGGAGG+GGG | - | chr4.4:37772321-37772340 | MS.gene45667:intron | 65.0% |
! | GGTGGTGGCTATGGAGGTGG+TGG | - | chr4.4:37772264-37772283 | MS.gene45667:intron | 65.0% |
! | GGTGGTGGTCGACGTGATGG+TGG | - | chr4.4:37772279-37772298 | MS.gene45667:intron | 65.0% |
! | GGTGGTTATGGCGGAGGTGG+TGG | - | chr4.4:37772246-37772265 | MS.gene45667:intron | 65.0% |
! | GGTTATGGCGGAGGTGGTGG+TGG | - | chr4.4:37772249-37772268 | MS.gene45667:intron | 65.0% |
!! | CAGTCCCGTGGTAGTGGTGG+AGG | - | chr4.4:37772186-37772205 | MS.gene45667:intron | 65.0% |
!! | CGCGGTGGTGGTGCTGATAG+CGG | - | chr4.4:37772462-37772481 | MS.gene45667:CDS | 65.0% |
!! | GAGTACCGGTGCTTCGTCGG+TGG | - | chr4.4:37771706-37771725 | MS.gene45667:CDS | 65.0% |
!! | GCTCAGTCCCGTGGTAGTGG+TGG | - | chr4.4:37772183-37772202 | MS.gene45667:intron | 65.0% |
!! | GGAGGTGGTGGTGGCTATGG+AGG | - | chr4.4:37772258-37772277 | MS.gene45667:intron | 65.0% |
!! | GGCGGTGGTGGATATGGTGG+CGG | - | chr4.4:37772222-37772241 | MS.gene45667:intron | 65.0% |
!! | GGTGGTGGATATGGTGGCGG+CGG | - | chr4.4:37772225-37772244 | MS.gene45667:intron | 65.0% |
!! | GGTGGTGGCGGTTATGGTGG+AGG | - | chr4.4:37772318-37772337 | MS.gene45667:intron | 65.0% |
!! | GGTGGTGGTGCTGATAGCGG+TGG | - | chr4.4:37772465-37772484 | MS.gene45667:CDS | 65.0% |
!! | GGTGGTGGTGGCGGTTATGG+TGG | - | chr4.4:37772315-37772334 | MS.gene45667:intron | 65.0% |
!! | GGTGGTGGTGGCTATGGAGG+TGG | - | chr4.4:37772261-37772280 | MS.gene45667:intron | 65.0% |
!! | TCCCGTGGTAGTGGTGGAGG+AGG | - | chr4.4:37772189-37772208 | MS.gene45667:intron | 65.0% |
GGTGGAGGAGGTCGAGGTGG+CGG | - | chr4.4:37772201-37772220 | MS.gene45667:intron | 70.0% | |
! | GGCGGTGGTTATGGCGGAGG+TGG | - | chr4.4:37772243-37772262 | MS.gene45667:intron | 70.0% |
! | GGTGGCGGCGGTGGTTATGG+CGG | - | chr4.4:37772237-37772256 | MS.gene45667:intron | 70.0% |
!! | GGCGGAGGTGGTGGTGGCTA+TGG | - | chr4.4:37772255-37772274 | MS.gene45667:intron | 70.0% |
!! | GGCGGCGGTGGTGGATATGG+TGG | - | chr4.4:37772219-37772238 | MS.gene45667:intron | 70.0% |
!! | GGTGGATATGGTGGCGGCGG+TGG | - | chr4.4:37772228-37772247 | MS.gene45667:intron | 70.0% |
!! | GGTGGCGGCGGTGGTGGATA+TGG | - | chr4.4:37772216-37772235 | MS.gene45667:intron | 70.0% |
!! | GGTGGTGGAGGTGGTGACCG+TGG | - | chr4.4:37772405-37772424 | MS.gene45667:CDS | 70.0% |
GGCGGCGGTGGTTATGGCGG+AGG | - | chr4.4:37772240-37772259 | MS.gene45667:intron | 75.0% | |
! | GGAGGAGGTCGAGGTGGCGG+CGG | - | chr4.4:37772204-37772223 | MS.gene45667:intron | 75.0% |
!! | GGAGGTCGAGGTGGCGGCGG+TGG | - | chr4.4:37772207-37772226 | MS.gene45667:intron | 80.0% |
!! | GGTCGAGGTGGCGGCGGTGG+TGG | - | chr4.4:37772210-37772229 | MS.gene45667:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 37771688 | 37772503 | 37771688 | ID=MS.gene45667 |
chr4.4 | mRNA | 37771688 | 37772503 | 37771688 | ID=MS.gene45667.t1;Parent=MS.gene45667 |
chr4.4 | exon | 37772390 | 37772503 | 37772390 | ID=MS.gene45667.t1.exon1;Parent=MS.gene45667.t1 |
chr4.4 | CDS | 37772390 | 37772503 | 37772390 | ID=cds.MS.gene45667.t1;Parent=MS.gene45667.t1 |
chr4.4 | exon | 37771688 | 37772143 | 37771688 | ID=MS.gene45667.t1.exon2;Parent=MS.gene45667.t1 |
chr4.4 | CDS | 37771688 | 37772143 | 37771688 | ID=cds.MS.gene45667.t1;Parent=MS.gene45667.t1 |
Gene Sequence |
Protein sequence |