Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05548.t1 | XP_013453094.1 | 78.5 | 339 | 40 | 4 | 1 | 312 | 1 | 333 | 1.20E-118 | 436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05548.t1 | Q9LV52 | 53.4 | 161 | 69 | 2 | 10 | 165 | 16 | 175 | 4.1e-35 | 150.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05548.t1 | A0A072UBW9 | 78.5 | 339 | 40 | 4 | 1 | 312 | 1 | 333 | 8.6e-119 | 436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene05548.t1 | TF | HSF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049580 | MS.gene05548 | 0.802042 | 6.77E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene05548 | 0.826677 | 2.38E-54 | -1.69E-46 |
| MS.gene049873 | MS.gene05548 | 0.813544 | 2.43E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene05548 | 0.807675 | 4.50E-50 | -1.69E-46 |
| MS.gene051678 | MS.gene05548 | 0.810849 | 9.40E-51 | -1.69E-46 |
| MS.gene052358 | MS.gene05548 | -0.823335 | 1.46E-53 | -1.69E-46 |
| MS.gene052458 | MS.gene05548 | 0.892887 | 1.05E-74 | -1.69E-46 |
| MS.gene053006 | MS.gene05548 | 0.804013 | 2.65E-49 | -1.69E-46 |
| MS.gene053188 | MS.gene05548 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene053294 | MS.gene05548 | 0.852726 | 3.82E-61 | -1.69E-46 |
| MS.gene053401 | MS.gene05548 | 0.825537 | 4.44E-54 | -1.69E-46 |
| MS.gene053963 | MS.gene05548 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene053995 | MS.gene05548 | 0.803665 | 3.13E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene055555 | 0.826244 | 3.02E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene055808 | 0.81043 | 1.16E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene056091 | 0.803351 | 3.63E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene057060 | 0.814291 | 1.66E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene057079 | 0.832204 | 1.08E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene057705 | 0.829128 | 6.12E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene05795 | 0.817022 | 4.09E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene058008 | 0.804989 | 1.66E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene059317 | 0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene05954 | 0.818451 | 1.95E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene059935 | 0.805064 | 1.60E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene061296 | 0.856475 | 3.14E-62 | -1.69E-46 |
| MS.gene05548 | MS.gene061900 | 0.856089 | 4.07E-62 | -1.69E-46 |
| MS.gene05548 | MS.gene061918 | -0.837862 | 4.05E-57 | -1.69E-46 |
| MS.gene05548 | MS.gene06304 | 0.818013 | 2.45E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene065793 | 0.809558 | 1.78E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene067428 | 0.822456 | 2.35E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene068135 | 0.822258 | 2.61E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene068565 | 0.825587 | 4.32E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene06883 | 0.810406 | 1.17E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene06984 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene070210 | 0.807105 | 5.95E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene070271 | 0.829047 | 6.40E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene070437 | 0.81175 | 5.99E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene070796 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene071034 | 0.800664 | 1.30E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene071322 | 0.801415 | 9.10E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene071568 | 0.803416 | 3.52E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene071570 | 0.801854 | 7.40E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene071960 | 0.823059 | 1.70E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene071975 | 0.800566 | 1.36E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene07205 | 0.801743 | 7.80E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene072213 | 0.829221 | 5.81E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene072280 | 0.81122 | 7.81E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene072299 | 0.820487 | 6.68E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene073300 | 0.819405 | 1.18E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene073301 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene073637 | 0.803765 | 2.98E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene074603 | 0.817882 | 2.62E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene08108 | 0.812943 | 3.29E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene08361 | 0.805106 | 1.57E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene08554 | 0.82183 | 3.28E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene08649 | 0.806997 | 6.27E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene08862 | 0.800528 | 1.38E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene09850 | 0.866524 | 2.68E-65 | -1.69E-46 |
| MS.gene05548 | MS.gene22195 | 0.804938 | 1.70E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene22974 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene24539 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene24623 | 0.801368 | 9.30E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene24628 | 0.80775 | 4.34E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene24923 | 0.845516 | 3.87E-59 | -1.69E-46 |
| MS.gene05548 | MS.gene25207 | 0.813137 | 2.98E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene25322 | 0.832131 | 1.13E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene25696 | 0.82936 | 5.38E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene25755 | 0.82832 | 9.60E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene26150 | 0.803077 | 4.14E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene26832 | 0.835207 | 1.92E-56 | -1.69E-46 |
| MS.gene05548 | MS.gene26962 | 0.829405 | 5.24E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene27314 | 0.841285 | 5.21E-58 | -1.69E-46 |
| MS.gene05548 | MS.gene29492 | 0.842176 | 3.03E-58 | -1.69E-46 |
| MS.gene05548 | MS.gene29612 | 0.834515 | 2.87E-56 | -1.69E-46 |
| MS.gene05548 | MS.gene29697 | 0.821401 | 4.12E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene31468 | 0.813207 | 2.88E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene31855 | 0.827189 | 1.79E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene31856 | 0.80006 | 1.72E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene32419 | 0.803621 | 3.19E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene32551 | 0.836113 | 1.13E-56 | -1.69E-46 |
| MS.gene05548 | MS.gene32552 | 0.827521 | 1.49E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene32574 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene33131 | 0.8234 | 1.41E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene33377 | 0.819014 | 1.45E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene33651 | 0.810947 | 8.95E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene34232 | 0.803211 | 3.88E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene34233 | 0.804156 | 2.47E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene35069 | 0.819644 | 1.04E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene36046 | 0.827957 | 1.17E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene36472 | 0.859545 | 3.84E-63 | -1.69E-46 |
| MS.gene05548 | MS.gene36496 | 0.810177 | 1.31E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene36625 | 0.830792 | 2.41E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene36740 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene37345 | -0.805954 | 1.04E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene37446 | 0.838733 | 2.41E-57 | -1.69E-46 |
| MS.gene05548 | MS.gene38659 | 0.800457 | 1.43E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene38754 | 0.810537 | 1.10E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene39190 | 0.817737 | 2.82E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene39213 | 0.861973 | 7.04E-64 | -1.69E-46 |
| MS.gene05548 | MS.gene39217 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene40709 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene40711 | 0.81045 | 1.15E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene40908 | 0.871792 | 5.22E-67 | -1.69E-46 |
| MS.gene05548 | MS.gene41606 | 0.822723 | 2.03E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene42057 | 0.812847 | 3.45E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene44077 | 0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene44240 | 0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene44256 | 0.823188 | 1.58E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene45652 | 0.821755 | 3.41E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene45667 | 0.809272 | 2.05E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene46390 | 0.814577 | 1.44E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene46771 | -0.800378 | 1.48E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene47050 | 0.803651 | 3.15E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene47794 | 0.802086 | 6.63E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene47878 | 0.806649 | 7.42E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene48323 | 0.807417 | 5.11E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene48389 | 0.807154 | 5.81E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene49310 | 0.805445 | 1.33E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene50546 | 0.81964 | 1.04E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene51145 | 0.857518 | 1.55E-62 | -1.69E-46 |
| MS.gene05548 | MS.gene52075 | 0.822818 | 1.93E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene52404 | 0.832374 | 9.80E-56 | -1.69E-46 |
| MS.gene05548 | MS.gene52628 | 0.805266 | 1.45E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene55020 | 0.808446 | 3.09E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene55024 | 0.800049 | 1.73E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene56468 | 0.84041 | 8.84E-58 | -1.69E-46 |
| MS.gene05548 | MS.gene56670 | 0.803967 | 2.71E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene56924 | 0.808914 | 2.45E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene57498 | 0.809158 | 2.17E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene57681 | 0.801765 | 7.72E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene59540 | 0.819808 | 9.56E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene59616 | 0.810628 | 1.05E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene59798 | 0.809242 | 2.08E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene60357 | 0.813402 | 2.61E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene60384 | 0.825197 | 5.35E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene61254 | 0.809605 | 1.74E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene61385 | 0.926194 | 6.56E-91 | -1.69E-46 |
| MS.gene05548 | MS.gene64395 | 0.806281 | 8.88E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene64517 | 0.861437 | 1.03E-63 | -1.69E-46 |
| MS.gene05548 | MS.gene64674 | 0.833144 | 6.31E-56 | -1.69E-46 |
| MS.gene05548 | MS.gene65413 | 0.812696 | 3.72E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene65495 | 0.823313 | 1.48E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene65896 | 0.803743 | 3.01E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene65946 | 0.839033 | 2.02E-57 | -1.69E-46 |
| MS.gene05548 | MS.gene66452 | 0.837829 | 4.13E-57 | -1.69E-46 |
| MS.gene05548 | MS.gene66474 | 0.819528 | 1.11E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene66619 | 0.824785 | 6.69E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene67485 | 0.813379 | 2.64E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene68215 | 0.838825 | 2.28E-57 | -1.69E-46 |
| MS.gene05548 | MS.gene68824 | 0.806465 | 8.12E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene69214 | 0.825251 | 5.19E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene69388 | 0.822514 | 2.27E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene69759 | 0.80467 | 1.93E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene70515 | 0.829439 | 5.14E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene70607 | 0.806489 | 8.02E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene70661 | 0.811591 | 6.49E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene71308 | 0.847812 | 9.13E-60 | -1.69E-46 |
| MS.gene05548 | MS.gene72057 | 0.802056 | 6.72E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene73234 | 0.829402 | 5.25E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene73743 | 0.8149 | 1.22E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene73823 | 0.806012 | 1.01E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene74530 | 0.802792 | 4.74E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene74982 | 0.837051 | 6.53E-57 | -1.69E-46 |
| MS.gene05548 | MS.gene74989 | 0.800309 | 1.53E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene75003 | 0.80435 | 2.25E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene75147 | 0.82353 | 1.32E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene76100 | 0.822636 | 2.13E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene77519 | 0.805002 | 1.65E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene77815 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene78354 | 0.835952 | 1.24E-56 | -1.69E-46 |
| MS.gene05548 | MS.gene79792 | 0.809754 | 1.62E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene80177 | 0.805627 | 1.22E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene80668 | 0.819474 | 1.14E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene80741 | 0.804332 | 2.27E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene80795 | 0.833275 | 5.86E-56 | -1.69E-46 |
| MS.gene05548 | MS.gene81406 | 0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene82387 | 0.812565 | 3.98E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene82800 | 0.801897 | 7.25E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene83326 | 0.818368 | 2.03E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene83830 | 0.817287 | 3.57E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene84040 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene86945 | 0.810152 | 1.33E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene88351 | 0.811655 | 6.28E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene90862 | 0.841121 | 5.76E-58 | -1.69E-46 |
| MS.gene05548 | MS.gene90981 | 0.819205 | 1.31E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene91606 | 0.80025 | 1.57E-48 | -1.69E-46 |
| MS.gene05548 | MS.gene91652 | 0.821343 | 4.25E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene92970 | 0.809179 | 2.15E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene93764 | 0.814558 | 1.45E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene94908 | 0.808689 | 2.74E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene95676 | 0.807747 | 4.35E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene95728 | 0.801776 | 7.68E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene96224 | -0.831592 | 1.53E-55 | -1.69E-46 |
| MS.gene05548 | MS.gene96338 | 0.836569 | 8.67E-57 | -1.69E-46 |
| MS.gene05548 | MS.gene96800 | 0.806768 | 7.01E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene96814 | -0.825885 | 3.67E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene97609 | 0.812214 | 4.74E-51 | -1.69E-46 |
| MS.gene05548 | MS.gene99848 | 0.807831 | 4.17E-50 | -1.69E-46 |
| MS.gene05548 | MS.gene99849 | 0.804712 | 1.89E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene99915 | 0.801784 | 7.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05548.t1 | MTR_6g086805 | 80.826 | 339 | 32 | 4 | 1 | 312 | 1 | 333 | 1.75e-171 | 484 |
| MS.gene05548.t1 | MTR_5g029680 | 34.298 | 242 | 117 | 6 | 3 | 207 | 24 | 260 | 3.33e-33 | 131 |
| MS.gene05548.t1 | MTR_3g104550 | 33.333 | 204 | 109 | 2 | 11 | 187 | 46 | 249 | 8.10e-29 | 117 |
| MS.gene05548.t1 | MTR_1g102860 | 30.802 | 237 | 132 | 5 | 11 | 218 | 40 | 273 | 5.88e-28 | 113 |
| MS.gene05548.t1 | MTR_7g095680 | 31.602 | 231 | 123 | 5 | 11 | 208 | 49 | 277 | 1.50e-27 | 113 |
| MS.gene05548.t1 | MTR_4g077970 | 33.019 | 212 | 107 | 5 | 6 | 182 | 7 | 218 | 2.27e-27 | 114 |
| MS.gene05548.t1 | MTR_1g061170 | 33.333 | 198 | 107 | 5 | 9 | 181 | 47 | 244 | 2.60e-26 | 110 |
| MS.gene05548.t1 | MTR_6g043060 | 32.394 | 213 | 108 | 6 | 9 | 189 | 20 | 228 | 1.28e-22 | 98.6 |
| MS.gene05548.t1 | MTR_8g105780 | 35.204 | 196 | 93 | 4 | 9 | 170 | 20 | 215 | 6.28e-22 | 97.1 |
| MS.gene05548.t1 | MTR_8g087540 | 31.034 | 203 | 105 | 5 | 9 | 182 | 10 | 206 | 1.97e-21 | 96.3 |
| MS.gene05548.t1 | MTR_2g100680 | 30.952 | 210 | 116 | 5 | 11 | 191 | 31 | 240 | 1.83e-20 | 94.0 |
| MS.gene05548.t1 | MTR_2g100670 | 30.102 | 196 | 100 | 3 | 10 | 175 | 32 | 220 | 7.86e-20 | 90.1 |
| MS.gene05548.t1 | MTR_1g100777 | 56.522 | 69 | 30 | 0 | 2 | 70 | 9 | 77 | 9.71e-20 | 89.7 |
| MS.gene05548.t1 | MTR_2g100670 | 30.102 | 196 | 100 | 3 | 10 | 175 | 140 | 328 | 1.18e-19 | 90.9 |
| MS.gene05548.t1 | MTR_8g083100 | 31.944 | 216 | 105 | 5 | 12 | 192 | 23 | 231 | 2.69e-19 | 90.5 |
| MS.gene05548.t1 | MTR_5g017470 | 55.882 | 68 | 30 | 0 | 3 | 70 | 1 | 68 | 5.37e-19 | 87.4 |
| MS.gene05548.t1 | MTR_5g010680 | 52.941 | 68 | 32 | 0 | 5 | 72 | 18 | 85 | 7.12e-19 | 88.2 |
| MS.gene05548.t1 | MTR_5g089170 | 57.576 | 66 | 28 | 0 | 5 | 70 | 19 | 84 | 1.11e-18 | 85.9 |
| MS.gene05548.t1 | MTR_2g017890 | 31.892 | 185 | 88 | 3 | 9 | 159 | 13 | 193 | 1.82e-18 | 87.0 |
| MS.gene05548.t1 | MTR_7g091370 | 54.098 | 61 | 28 | 0 | 10 | 70 | 21 | 81 | 2.23e-18 | 84.3 |
| MS.gene05548.t1 | MTR_3g101870 | 58.730 | 63 | 26 | 0 | 8 | 70 | 21 | 83 | 2.69e-18 | 86.7 |
| MS.gene05548.t1 | MTR_1g071360 | 31.351 | 185 | 77 | 4 | 11 | 162 | 29 | 196 | 4.52e-18 | 85.9 |
| MS.gene05548.t1 | MTR_1g071360 | 31.351 | 185 | 77 | 4 | 11 | 162 | 32 | 199 | 5.41e-18 | 85.1 |
| MS.gene05548.t1 | MTR_4g045757 | 50.000 | 68 | 33 | 1 | 7 | 73 | 10 | 77 | 1.24e-16 | 74.7 |
| MS.gene05548.t1 | MTR_0020s0020 | 51.515 | 66 | 32 | 0 | 5 | 70 | 27 | 92 | 1.34e-16 | 81.3 |
| MS.gene05548.t1 | MTR_4g088900 | 49.231 | 65 | 29 | 1 | 10 | 70 | 32 | 96 | 3.34e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05548.t1 | AT3G24520 | 48.113 | 212 | 58 | 4 | 8 | 189 | 14 | 203 | 9.59e-53 | 180 |
| MS.gene05548.t1 | AT4G17750 | 36.327 | 245 | 107 | 6 | 3 | 203 | 44 | 283 | 1.47e-32 | 129 |
| MS.gene05548.t1 | AT1G32330 | 35.023 | 217 | 100 | 4 | 6 | 181 | 32 | 248 | 6.61e-31 | 124 |
| MS.gene05548.t1 | AT1G32330 | 35.023 | 217 | 100 | 4 | 6 | 181 | 32 | 248 | 6.76e-31 | 124 |
| MS.gene05548.t1 | AT3G51910 | 32.692 | 208 | 115 | 5 | 7 | 193 | 25 | 228 | 2.00e-28 | 113 |
| MS.gene05548.t1 | AT2G26150 | 34.146 | 205 | 104 | 4 | 11 | 184 | 44 | 248 | 7.22e-28 | 113 |
| MS.gene05548.t1 | AT2G26150 | 34.146 | 205 | 104 | 4 | 11 | 184 | 44 | 248 | 7.22e-28 | 113 |
| MS.gene05548.t1 | AT3G22830 | 30.677 | 251 | 135 | 7 | 11 | 224 | 61 | 309 | 2.16e-27 | 113 |
| MS.gene05548.t1 | AT3G63350 | 34.197 | 193 | 101 | 5 | 10 | 176 | 27 | 219 | 6.36e-27 | 109 |
| MS.gene05548.t1 | AT5G16820 | 33.491 | 212 | 105 | 5 | 7 | 182 | 23 | 234 | 2.43e-26 | 111 |
| MS.gene05548.t1 | AT5G16820 | 33.491 | 212 | 105 | 5 | 7 | 182 | 23 | 234 | 2.43e-26 | 111 |
| MS.gene05548.t1 | AT3G02990 | 34.615 | 208 | 102 | 4 | 9 | 182 | 21 | 228 | 3.13e-26 | 110 |
| MS.gene05548.t1 | AT5G03720 | 31.579 | 228 | 119 | 6 | 1 | 191 | 45 | 272 | 5.45e-25 | 106 |
| MS.gene05548.t1 | AT5G03720 | 31.579 | 228 | 119 | 6 | 1 | 191 | 45 | 272 | 5.45e-25 | 106 |
| MS.gene05548.t1 | AT1G67970 | 30.729 | 192 | 101 | 5 | 9 | 170 | 17 | 206 | 2.73e-24 | 103 |
| MS.gene05548.t1 | AT5G54070 | 30.270 | 185 | 107 | 4 | 8 | 172 | 68 | 250 | 4.81e-23 | 99.8 |
| MS.gene05548.t1 | AT5G43840 | 31.214 | 173 | 98 | 4 | 10 | 165 | 18 | 186 | 1.55e-19 | 89.0 |
| MS.gene05548.t1 | AT1G46264 | 58.730 | 63 | 26 | 0 | 8 | 70 | 31 | 93 | 1.55e-18 | 87.0 |
| MS.gene05548.t1 | AT4G13980 | 30.256 | 195 | 112 | 4 | 12 | 182 | 24 | 218 | 1.93e-18 | 87.8 |
| MS.gene05548.t1 | AT4G11660 | 54.412 | 68 | 31 | 0 | 5 | 72 | 53 | 120 | 2.51e-18 | 86.7 |
| MS.gene05548.t1 | AT4G18880 | 29.730 | 259 | 144 | 4 | 9 | 232 | 13 | 268 | 6.29e-18 | 85.9 |
| MS.gene05548.t1 | AT5G45710 | 28.472 | 288 | 161 | 8 | 3 | 251 | 1 | 282 | 7.31e-18 | 85.1 |
| MS.gene05548.t1 | AT5G45710 | 28.472 | 288 | 161 | 8 | 3 | 251 | 1 | 282 | 7.31e-18 | 85.1 |
| MS.gene05548.t1 | AT4G36990 | 50.000 | 68 | 34 | 0 | 5 | 72 | 8 | 75 | 7.38e-18 | 84.0 |
| MS.gene05548.t1 | AT2G41690 | 54.839 | 62 | 28 | 0 | 11 | 72 | 40 | 101 | 6.95e-17 | 80.5 |
| MS.gene05548.t1 | AT5G62020 | 51.515 | 66 | 32 | 0 | 5 | 70 | 17 | 82 | 2.19e-16 | 80.1 |
Find 138 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGGAGGGATTTGGATTT+TGG | 0.186974 | 6.2:+85123037 | MS.gene05548:CDS |
| TAGAAGTGATAGTAGTAAAA+AGG | 0.204760 | 6.2:+85121464 | MS.gene05548:CDS |
| AAGAGAGTGAGAGAATTCTA+AGG | 0.267094 | 6.2:-85120327 | None:intergenic |
| TGGCTCCGGTGGGTGGTTGG+TGG | 0.288941 | 6.2:+85121340 | MS.gene05548:CDS |
| GCTCCGGTGGGTGGTTGGTG+GGG | 0.299967 | 6.2:+85121342 | MS.gene05548:CDS |
| GGTCTGGTGGTGGTTTGATT+CGG | 0.318671 | 6.2:-85122868 | None:intergenic |
| GTCTGGTGGTGGTTTGATTC+GGG | 0.321771 | 6.2:-85122867 | None:intergenic |
| AAGAAACATGTTGGTGGTAT+TGG | 0.321921 | 6.2:+85120820 | MS.gene05548:CDS |
| TTGATAAGGTTATCTGTGTT+TGG | 0.326130 | 6.2:-85120266 | None:intergenic |
| ACATCATGAAAGGAGGGATT+TGG | 0.333945 | 6.2:+85123030 | MS.gene05548:CDS |
| AGTTTGGACAGATGGGTTAT+AGG | 0.339452 | 6.2:+85121373 | MS.gene05548:CDS |
| CTCCGGTGGGTGGTTGGTGG+GGG | 0.345456 | 6.2:+85121343 | MS.gene05548:CDS |
| ATTTGTTGAAGAACATAGTT+AGG | 0.347369 | 6.2:+85120797 | MS.gene05548:intron |
| GGGCATGGCGGTGGCAAATT+CGG | 0.364204 | 6.2:+85121206 | MS.gene05548:CDS |
| GAAACCCAAAACGGCGAAAA+GGG | 0.368900 | 6.2:+85122945 | MS.gene05548:CDS |
| TTCTTGCGGCTTTGTGTTTG+TGG | 0.372902 | 6.2:-85122809 | None:intergenic |
| GGTGTGTCGTGGTTGTTCTT+AGG | 0.374378 | 6.2:-85122787 | None:intergenic |
| GTTGTGGTTCGCGGATTTCT+CGG | 0.391341 | 6.2:-85122715 | None:intergenic |
| GTCTATTGAGCTGCACCACT+TGG | 0.403079 | 6.2:-85122978 | None:intergenic |
| ACGATGAAACTGTTGTTAGA+TGG | 0.404226 | 6.2:-85120296 | None:intergenic |
| TTTCATGATGTAGATCTTGA+AGG | 0.404961 | 6.2:-85123018 | None:intergenic |
| GGCTCCGGTGGGTGGTTGGT+GGG | 0.407249 | 6.2:+85121341 | MS.gene05548:CDS |
| CGGCGCCGGCGCCGATGATG+TGG | 0.410102 | 6.2:+85121433 | MS.gene05548:CDS |
| CCACCAGACCGCAACGGACG+GGG | 0.413488 | 6.2:+85122881 | MS.gene05548:CDS |
| ACCACCAGACCGCAACGGAC+GGG | 0.427775 | 6.2:+85122880 | MS.gene05548:CDS |
| GCCGGTGTTGTCTCCGGCGC+CGG | 0.429564 | 6.2:+85121419 | MS.gene05548:CDS |
| CTCGCCTCCAAGTTGTCTCC+TGG | 0.429901 | 6.2:-85122737 | None:intergenic |
| TCCAAGTTGTCTCCTGGTTG+TGG | 0.431193 | 6.2:-85122731 | None:intergenic |
| CATGTTGGTGGTATTGGAAA+TGG | 0.433048 | 6.2:+85120826 | MS.gene05548:CDS |
| GGCTCGGATCTCCACTTTGG+TGG | 0.435110 | 6.2:-85122846 | None:intergenic |
| TCTTGCGGCTTTGTGTTTGT+GGG | 0.443619 | 6.2:-85122808 | None:intergenic |
| TGTCTCCTGGTTGTGGTTCG+CGG | 0.445633 | 6.2:-85122724 | None:intergenic |
| TTCGGTGAAGATGGAGTTTG+AGG | 0.446034 | 6.2:+85121224 | MS.gene05548:CDS |
| TCCACTTTGGTGGGTGGTGT+CGG | 0.453855 | 6.2:-85122836 | None:intergenic |
| AGTATTCTAGACAAAATTTG+AGG | 0.453954 | 6.2:-85121072 | None:intergenic |
| TGTCGGAAATTTCAATGAAA+TGG | 0.454809 | 6.2:+85121491 | MS.gene05548:CDS |
| GTGGTGGTTTGATTCGGGCT+CGG | 0.456111 | 6.2:-85122862 | None:intergenic |
| AGAAACCCAAAACGGCGAAA+AGG | 0.456161 | 6.2:+85122944 | MS.gene05548:CDS |
| GCTCGGATCTCCACTTTGGT+GGG | 0.459906 | 6.2:-85122845 | None:intergenic |
| GTCAACTTCCTCGGAGTCAT+CGG | 0.460070 | 6.2:+85121185 | MS.gene05548:CDS |
| TCTATTGAGCTGCACCACTT+GGG | 0.462504 | 6.2:-85122977 | None:intergenic |
| GGTTGTTCTTAGGTGGTTGA+CGG | 0.462794 | 6.2:-85122777 | None:intergenic |
| TAGATGGGCCCCACTTGATA+AGG | 0.462941 | 6.2:-85120280 | None:intergenic |
| CCACCTCCTGCGGTGGTGCA+CGG | 0.463396 | 6.2:-85121320 | None:intergenic |
| TTCTCTCACCTCTCCGCCTA+CGG | 0.463688 | 6.2:-85122925 | None:intergenic |
| CTTGTGTTCTTAAATGGGAA+TGG | 0.469203 | 6.2:+85120187 | None:intergenic |
| CACCACCAGACCGCAACGGA+CGG | 0.469287 | 6.2:+85122879 | MS.gene05548:CDS |
| ATGTCGTCGTCGCCGGAGCT+TGG | 0.470572 | 6.2:+85121276 | MS.gene05548:CDS |
| CGTCCGTTGCGGTCTGGTGG+TGG | 0.473332 | 6.2:-85122878 | None:intergenic |
| TTTAGAAGAAGATGAAGCTA+TGG | 0.473347 | 6.2:+85120915 | MS.gene05548:CDS |
| TTGTTGTGTTTGAAGAAAAG+AGG | 0.474502 | 6.2:-85120353 | None:intergenic |
| GGAGTCATCGGGCATGGCGG+TGG | 0.474769 | 6.2:+85121197 | MS.gene05548:CDS |
| CACATCATCGGCGCCGGCGC+CGG | 0.474975 | 6.2:-85121432 | None:intergenic |
| CAGGAGGTGGCTCCGGTGGG+TGG | 0.478583 | 6.2:+85121333 | MS.gene05548:CDS |
| ACCGCAGGAGGTGGCTCCGG+TGG | 0.478779 | 6.2:+85121329 | MS.gene05548:CDS |
| GGCGCCGGCGCCGATGATGT+GGG | 0.479475 | 6.2:+85121434 | MS.gene05548:CDS |
| GTTGATATCTCCGGTGGCTA+AGG | 0.482556 | 6.2:+85121140 | MS.gene05548:CDS |
| GGTGGCTAAGGCGGCCGTGA+CGG | 0.483148 | 6.2:+85121152 | MS.gene05548:CDS |
| CCGTGCACCACCGCAGGAGG+TGG | 0.485061 | 6.2:+85121320 | MS.gene05548:CDS |
| ACCACCGCAGGAGGTGGCTC+CGG | 0.485869 | 6.2:+85121326 | MS.gene05548:CDS |
| ACGGATGCCGGTGTTGTCTC+CGG | 0.489094 | 6.2:+85121413 | MS.gene05548:CDS |
| AGGTGGCTCCGGTGGGTGGT+TGG | 0.489246 | 6.2:+85121337 | MS.gene05548:CDS |
| AATTTAGAAGAAGAGCTTCA+AGG | 0.492990 | 6.2:+85120973 | MS.gene05548:CDS |
| TAACATGATGTCGTCGTCGC+CGG | 0.497684 | 6.2:+85121269 | MS.gene05548:CDS |
| GCAGATGGAGTTTGGACAGA+TGG | 0.497763 | 6.2:+85121365 | MS.gene05548:CDS |
| CTATTGAGCTGCACCACTTG+GGG | 0.499613 | 6.2:-85122976 | None:intergenic |
| ACCACAACCAGGAGACAACT+TGG | 0.502700 | 6.2:+85122730 | MS.gene05548:CDS |
| CCGCAGGAGGTGGCTCCGGT+GGG | 0.505617 | 6.2:+85121330 | MS.gene05548:CDS |
| GTTCGCGGATTTCTCGGTGA+TGG | 0.507533 | 6.2:-85122709 | None:intergenic |
| TCAACTTCCTCGGAGTCATC+GGG | 0.508311 | 6.2:+85121186 | MS.gene05548:CDS |
| CGATGAAACTGTTGTTAGAT+GGG | 0.511534 | 6.2:-85120295 | None:intergenic |
| TGACGTCGTTGCCGCCGTCA+CGG | 0.512284 | 6.2:-85121166 | None:intergenic |
| TCGGGCTCGGATCTCCACTT+TGG | 0.515219 | 6.2:-85122849 | None:intergenic |
| AGAAGATGAAGCTATGGTGA+TGG | 0.518088 | 6.2:+85120921 | MS.gene05548:CDS |
| GGCAACGACGTCAACTTCCT+CGG | 0.518118 | 6.2:+85121176 | MS.gene05548:CDS |
| CAGATGGAGTTTGGACAGAT+GGG | 0.518140 | 6.2:+85121366 | MS.gene05548:CDS |
| GAAAAGACCACAACAAATGA+TGG | 0.518696 | 6.2:+85121023 | MS.gene05548:CDS |
| GGCTAAGGCGGCCGTGACGG+CGG | 0.526324 | 6.2:+85121155 | MS.gene05548:CDS |
| GAGGAAGATGAGGTAACGGT+TGG | 0.526402 | 6.2:+85121243 | MS.gene05548:CDS |
| GATGGAGTTTGAGGAAGATG+AGG | 0.529799 | 6.2:+85121233 | MS.gene05548:CDS |
| CGGATCTCCACTTTGGTGGG+TGG | 0.536990 | 6.2:-85122842 | None:intergenic |
| ACCGGAGCCACCTCCTGCGG+TGG | 0.537226 | 6.2:-85121327 | None:intergenic |
| GAAATCCGCGAACCACAACC+AGG | 0.537923 | 6.2:+85122719 | MS.gene05548:CDS |
| TTCCTCGGAGTCATCGGGCA+TGG | 0.539288 | 6.2:+85121191 | MS.gene05548:CDS |
| GAAACGACGGTTGATATCTC+CGG | 0.543586 | 6.2:+85121131 | MS.gene05548:CDS |
| CCCCGTCCGTTGCGGTCTGG+TGG | 0.544317 | 6.2:-85122881 | None:intergenic |
| GGTGGCAAATTCGGTGAAGA+TGG | 0.545610 | 6.2:+85121215 | MS.gene05548:CDS |
| GTCACGGCCGCCTTAGCCAC+CGG | 0.545636 | 6.2:-85121150 | None:intergenic |
| TCAATTTCAAAACCAAGCTC+CGG | 0.549174 | 6.2:-85121288 | None:intergenic |
| TCACCCCACATCATCGGCGC+CGG | 0.555196 | 6.2:-85121438 | None:intergenic |
| CACCAGACCGCAACGGACGG+GGG | 0.555986 | 6.2:+85122882 | MS.gene05548:CDS |
| GATATCTCCGGTGGCTAAGG+CGG | 0.568045 | 6.2:+85121143 | MS.gene05548:CDS |
| TTCAAGATCTACATCATGAA+AGG | 0.568947 | 6.2:+85123020 | MS.gene05548:CDS |
| AAGTGGTGCAGCTCAATAGA+CGG | 0.573747 | 6.2:+85122980 | MS.gene05548:CDS |
| TTGTGAAGTTCCACGGATGC+CGG | 0.574030 | 6.2:+85121401 | MS.gene05548:CDS |
| CTATTCTCACCCCACATCAT+CGG | 0.575525 | 6.2:-85121444 | None:intergenic |
| TTTGCACCGTGCACCACCGC+AGG | 0.578267 | 6.2:+85121314 | MS.gene05548:CDS |
| AGAGAGTGAGAGAATTCTAA+GGG | 0.578397 | 6.2:-85120326 | None:intergenic |
| GGAGACAACACCGGCATCCG+TGG | 0.579394 | 6.2:-85121411 | None:intergenic |
| AAGCAAAACGGTACCGTAGG+CGG | 0.583516 | 6.2:+85122912 | MS.gene05548:CDS |
| GCACCGTGCACCACCGCAGG+AGG | 0.584699 | 6.2:+85121317 | MS.gene05548:CDS |
| AAGATCTACATCATGAAAGG+AGG | 0.592580 | 6.2:+85123023 | MS.gene05548:CDS |
| GGCGTGATTGTGAAGTTCCA+CGG | 0.595018 | 6.2:+85121394 | MS.gene05548:CDS |
| CCCACCGGAGCCACCTCCTG+CGG | 0.595130 | 6.2:-85121330 | None:intergenic |
| GTTTGAGGAAGATGAGGTAA+CGG | 0.595921 | 6.2:+85121239 | MS.gene05548:CDS |
| ACACAGATAACCTTATCAAG+TGG | 0.597268 | 6.2:+85120270 | MS.gene05548:CDS |
| CACAGATAACCTTATCAAGT+GGG | 0.597725 | 6.2:+85120271 | MS.gene05548:CDS |
| GTGTCGTGGTTGTTCTTAGG+TGG | 0.597878 | 6.2:-85122784 | None:intergenic |
| CTGAAGCAAAACGGTACCGT+AGG | 0.598486 | 6.2:+85122909 | MS.gene05548:CDS |
| GCCGGCGCCGGAGACAACAC+CGG | 0.598769 | 6.2:-85121420 | None:intergenic |
| ACCGACACCACCCACCAAAG+TGG | 0.605499 | 6.2:+85122835 | MS.gene05548:CDS |
| TATTGAGCTGCACCACTTGG+GGG | 0.607043 | 6.2:-85122975 | None:intergenic |
| TTGTGTTTGTGGGTGTGTCG+TGG | 0.608248 | 6.2:-85122798 | None:intergenic |
| GCGCCGGCGCCGATGATGTG+GGG | 0.609629 | 6.2:+85121435 | MS.gene05548:CDS |
| AGATCTACATCATGAAAGGA+GGG | 0.611772 | 6.2:+85123024 | MS.gene05548:CDS |
| ACAAACACAAAGCCGCAAGA+AGG | 0.614468 | 6.2:+85122811 | MS.gene05548:CDS |
| GTTAGGAAGAAACATGTTGG+TGG | 0.621782 | 6.2:+85120814 | MS.gene05548:CDS |
| AAACCACCACCAGACCGCAA+CGG | 0.622499 | 6.2:+85122875 | MS.gene05548:CDS |
| TGTTCTTAGGTGGTTGACGG+CGG | 0.622727 | 6.2:-85122774 | None:intergenic |
| CGCCATGCCCGATGACTCCG+AGG | 0.624450 | 6.2:-85121193 | None:intergenic |
| AAATTTCAATGAAATGGCGG+CGG | 0.625567 | 6.2:+85121497 | MS.gene05548:CDS |
| CAGGAGACAACTTGGAGGCG+AGG | 0.627864 | 6.2:+85122738 | MS.gene05548:CDS |
| CATTATGAAGACATACCACA+TGG | 0.631169 | 6.2:+85120235 | MS.gene05548:CDS |
| TGTTTGGTTCATTAACCATG+TGG | 0.639928 | 6.2:-85120250 | None:intergenic |
| ACAACCAGGAGACAACTTGG+AGG | 0.647355 | 6.2:+85122733 | MS.gene05548:CDS |
| CGGAAATTTCAATGAAATGG+CGG | 0.648772 | 6.2:+85121494 | MS.gene05548:CDS |
| GTGGTGTCGGTTCCTTCTTG+CGG | 0.649024 | 6.2:-85122823 | None:intergenic |
| ATAGTTAGGAAGAAACATGT+TGG | 0.649558 | 6.2:+85120811 | MS.gene05548:CDS |
| AAACGGTACCGTAGGCGGAG+AGG | 0.652017 | 6.2:+85122917 | MS.gene05548:CDS |
| GAGGTGAGAGAAACCCAAAA+CGG | 0.665995 | 6.2:+85122936 | MS.gene05548:CDS |
| ATGTAGATCTTGAAGGTGAG+TGG | 0.679197 | 6.2:-85123011 | None:intergenic |
| TTGGAGGCGAGGCAAAACAG+CGG | 0.680051 | 6.2:+85122749 | MS.gene05548:CDS |
| ACGACGGTTGATATCTCCGG+TGG | 0.680566 | 6.2:+85121134 | MS.gene05548:CDS |
| CTCGGAGTCATCGGGCATGG+CGG | 0.681310 | 6.2:+85121194 | MS.gene05548:CDS |
| TGGTATGTCTTCATAATGAA+CGG | 0.681423 | 6.2:-85120230 | None:intergenic |
| TTGTTGATAACAAGAAACGA+CGG | 0.686402 | 6.2:+85121118 | MS.gene05548:CDS |
| ACAGATAACCTTATCAAGTG+GGG | 0.700643 | 6.2:+85120272 | MS.gene05548:CDS |
| TTGGTGGTATTGGAAATGGA+AGG | 0.715173 | 6.2:+85120830 | MS.gene05548:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAGTTTAATTATGTT+GGG | + | chr6.2:85121831-85121850 | MS.gene05548:intron | 10.0% |
| !!! | TTAATCATAAAATTTTATCT+TGG | + | chr6.2:85121590-85121609 | MS.gene05548:intron | 10.0% |
| !! | CAAATAAAGTTTAATTATGT+TGG | + | chr6.2:85121830-85121849 | MS.gene05548:intron | 15.0% |
| !!! | AAAAAATTGATAATTGGATT+AGG | - | chr6.2:85120421-85120440 | None:intergenic | 15.0% |
| !!! | AAACATTTTTTTTTAATCGT+AGG | - | chr6.2:85121889-85121908 | None:intergenic | 15.0% |
| !!! | AAACTCACTTTTTTATTAAT+TGG | + | chr6.2:85120459-85120478 | MS.gene05548:intron | 15.0% |
| !!! | AACATTTTTTTTTAATCGTA+GGG | - | chr6.2:85121888-85121907 | None:intergenic | 15.0% |
| !!! | CAATAATAACTATTTTAATG+AGG | + | chr6.2:85120879-85120898 | MS.gene05548:CDS | 15.0% |
| !!! | TGTACTAAAAAATTGATAAT+TGG | - | chr6.2:85120427-85120446 | None:intergenic | 15.0% |
| !! | AGATAAAACAAAAAGTCAAA+AGG | + | chr6.2:85121715-85121734 | MS.gene05548:intron | 20.0% |
| !! | TTACACAACAAAATATCTAA+TGG | - | chr6.2:85121783-85121802 | None:intergenic | 20.0% |
| !! | TTTGCCTATAAAAAAAAGAT+CGG | - | chr6.2:85121972-85121991 | None:intergenic | 20.0% |
| !!! | AGTAATATTTTTGTCTGAAT+TGG | + | chr6.2:85120605-85120624 | MS.gene05548:intron | 20.0% |
| !!! | GTAATATTTTTGTCTGAATT+GGG | + | chr6.2:85120606-85120625 | MS.gene05548:intron | 20.0% |
| !!! | TTGTGTTTTGTTTTTGTTTA+GGG | + | chr6.2:85120709-85120728 | MS.gene05548:intron | 20.0% |
| !!! | TTTGTGTTTTGTTTTTGTTT+AGG | + | chr6.2:85120708-85120727 | MS.gene05548:intron | 20.0% |
| ! | AGAAGTGATAGTAGTAAAAA+GGG | + | chr6.2:85121465-85121484 | MS.gene05548:CDS | 25.0% |
| ! | AGTATTCTAGACAAAATTTG+AGG | - | chr6.2:85121075-85121094 | None:intergenic | 25.0% |
| ! | TAGAAGTGATAGTAGTAAAA+AGG | + | chr6.2:85121464-85121483 | MS.gene05548:CDS | 25.0% |
| ! | TCCTCTACAAAAATATCTAA+TGG | - | chr6.2:85121756-85121775 | None:intergenic | 25.0% |
| !! | AGTTTAATTATGTTGGGTTT+TGG | + | chr6.2:85121837-85121856 | MS.gene05548:intron | 25.0% |
| !! | ATTTGTTGAAGAACATAGTT+AGG | + | chr6.2:85120797-85120816 | MS.gene05548:intron | 25.0% |
| !! | GTTTAATTATGTTGGGTTTT+GGG | + | chr6.2:85121838-85121857 | MS.gene05548:intron | 25.0% |
| !!! | AAAAAAAGTGTTACAAAGAC+TGG | + | chr6.2:85122012-85122031 | MS.gene05548:intron | 25.0% |
| !!! | AAAAAAGTGAGTTTTTGAAG+TGG | - | chr6.2:85120453-85120472 | None:intergenic | 25.0% |
| !!! | AAAAAAGTGTTACAAAGACT+GGG | + | chr6.2:85122013-85122032 | MS.gene05548:intron | 25.0% |
| !!! | AAAAAGTGAGTTTTTGAAGT+GGG | - | chr6.2:85120452-85120471 | None:intergenic | 25.0% |
| !!! | AACTCCGATCTTTTTTTTAT+AGG | + | chr6.2:85121965-85121984 | MS.gene05548:intron | 25.0% |
| !!! | ACCATTAGATATTTTTGTAG+AGG | + | chr6.2:85121752-85121771 | MS.gene05548:intron | 25.0% |
| !!! | ATGTTTGTTGTTACTAGATT+GGG | - | chr6.2:85122487-85122506 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTGCAAACCAAAT+CGG | - | chr6.2:85120545-85120564 | None:intergenic | 25.0% |
| !!! | TATGTTTGTTGTTACTAGAT+TGG | - | chr6.2:85122488-85122507 | None:intergenic | 25.0% |
| AAGTGATAGTAGTAAAAAGG+GGG | + | chr6.2:85121467-85121486 | MS.gene05548:CDS | 30.0% | |
| AATTTAGAAGAAGAGCTTCA+AGG | + | chr6.2:85120973-85120992 | MS.gene05548:CDS | 30.0% | |
| ATAGTTAGGAAGAAACATGT+TGG | + | chr6.2:85120811-85120830 | MS.gene05548:CDS | 30.0% | |
| GAACAACTAGAGTTTAAGAA+TGG | + | chr6.2:85122216-85122235 | MS.gene05548:intron | 30.0% | |
| GAAGTGATAGTAGTAAAAAG+GGG | + | chr6.2:85121466-85121485 | MS.gene05548:CDS | 30.0% | |
| TCTAACAACGAAAAAGGATA+AGG | - | chr6.2:85121540-85121559 | None:intergenic | 30.0% | |
| TGGTATGTCTTCATAATGAA+CGG | - | chr6.2:85120233-85120252 | None:intergenic | 30.0% | |
| TGTCGGAAATTTCAATGAAA+TGG | + | chr6.2:85121491-85121510 | MS.gene05548:CDS | 30.0% | |
| TTCAAGATCTACATCATGAA+AGG | + | chr6.2:85123020-85123039 | MS.gene05548:CDS | 30.0% | |
| TTCTCGATAATTCGATCAAA+TGG | + | chr6.2:85120491-85120510 | MS.gene05548:intron | 30.0% | |
| TTGATAAGGTTATCTGTGTT+TGG | - | chr6.2:85120269-85120288 | None:intergenic | 30.0% | |
| TTGTTGTGTTTGAAGAAAAG+AGG | - | chr6.2:85120356-85120375 | None:intergenic | 30.0% | |
| TTTAGAAGAAGATGAAGCTA+TGG | + | chr6.2:85120915-85120934 | MS.gene05548:CDS | 30.0% | |
| TTTCATGATGTAGATCTTGA+AGG | - | chr6.2:85123021-85123040 | None:intergenic | 30.0% | |
| ! | AAAAAAGCCATCATTTGTTG+TGG | - | chr6.2:85121033-85121052 | None:intergenic | 30.0% |
| !! | AAAAAGTGTTACAAAGACTG+GGG | + | chr6.2:85122014-85122033 | MS.gene05548:intron | 30.0% |
| !! | AAATTGTGACGGACTAAATT+AGG | - | chr6.2:85120520-85120539 | None:intergenic | 30.0% |
| !! | CAGATATGACATTTTTGAAG+TGG | - | chr6.2:85122458-85122477 | None:intergenic | 30.0% |
| !! | TATCCTTTTTCGTTGTTAGA+AGG | + | chr6.2:85121540-85121559 | MS.gene05548:intron | 30.0% |
| !! | TTGTTGATAACAAGAAACGA+CGG | + | chr6.2:85121118-85121137 | MS.gene05548:CDS | 30.0% |
| !!! | GTCGTGTTTGTTTTTATCAT+TGG | - | chr6.2:85122514-85122533 | None:intergenic | 30.0% |
| AAATTTCAATGAAATGGCGG+CGG | + | chr6.2:85121497-85121516 | MS.gene05548:CDS | 35.0% | |
| AACAACGAAAAAGGATAAGG+TGG | - | chr6.2:85121537-85121556 | None:intergenic | 35.0% | |
| AAGAGAGTGAGAGAATTCTA+AGG | - | chr6.2:85120330-85120349 | None:intergenic | 35.0% | |
| AAGATCTACATCATGAAAGG+AGG | + | chr6.2:85123023-85123042 | MS.gene05548:CDS | 35.0% | |
| ACACAGATAACCTTATCAAG+TGG | + | chr6.2:85120270-85120289 | MS.gene05548:CDS | 35.0% | |
| ACAGATAACCTTATCAAGTG+GGG | + | chr6.2:85120272-85120291 | MS.gene05548:CDS | 35.0% | |
| ACGATGAAACTGTTGTTAGA+TGG | - | chr6.2:85120299-85120318 | None:intergenic | 35.0% | |
| AGAGAGTGAGAGAATTCTAA+GGG | - | chr6.2:85120329-85120348 | None:intergenic | 35.0% | |
| AGATCTACATCATGAAAGGA+GGG | + | chr6.2:85123024-85123043 | MS.gene05548:CDS | 35.0% | |
| AGTGATAGTAGTAAAAAGGG+GGG | + | chr6.2:85121468-85121487 | MS.gene05548:CDS | 35.0% | |
| ATTGTTTCGTAAACCCGAAA+GGG | - | chr6.2:85122435-85122454 | None:intergenic | 35.0% | |
| CACAGATAACCTTATCAAGT+GGG | + | chr6.2:85120271-85120290 | MS.gene05548:CDS | 35.0% | |
| CATTATGAAGACATACCACA+TGG | + | chr6.2:85120235-85120254 | MS.gene05548:CDS | 35.0% | |
| CCAAATCGGAAAAATTGTGA+CGG | - | chr6.2:85120531-85120550 | None:intergenic | 35.0% | |
| CGATGAAACTGTTGTTAGAT+GGG | - | chr6.2:85120298-85120317 | None:intergenic | 35.0% | |
| CGGAAATTTCAATGAAATGG+CGG | + | chr6.2:85121494-85121513 | MS.gene05548:CDS | 35.0% | |
| GAAAAGACCACAACAAATGA+TGG | + | chr6.2:85121023-85121042 | MS.gene05548:CDS | 35.0% | |
| GAATATAGGTGGTTATGTGT+TGG | - | chr6.2:85122680-85122699 | None:intergenic | 35.0% | |
| GATCTCAACATATCTGATGA+AGG | + | chr6.2:85122613-85122632 | MS.gene05548:intron | 35.0% | |
| TAGAGTTTAAGAATGGCGAA+TGG | + | chr6.2:85122223-85122242 | MS.gene05548:intron | 35.0% | |
| TAGATTAGAGTCGATCCATT+TGG | - | chr6.2:85122097-85122116 | None:intergenic | 35.0% | |
| TCAATTTCAAAACCAAGCTC+CGG | - | chr6.2:85121291-85121310 | None:intergenic | 35.0% | |
| TCTTGAGAAAACAGTCCAAA+TGG | + | chr6.2:85122079-85122098 | MS.gene05548:intron | 35.0% | |
| ! | TGTTTAGGGTTTCAGAAAAG+TGG | + | chr6.2:85120723-85120742 | MS.gene05548:intron | 35.0% |
| ! | TGTTTGGTTCATTAACCATG+TGG | - | chr6.2:85120253-85120272 | None:intergenic | 35.0% |
| ! | TTGTTGTTACTAGATTGGGA+GGG | - | chr6.2:85122483-85122502 | None:intergenic | 35.0% |
| !! | AAAAGTGTTACAAAGACTGG+GGG | + | chr6.2:85122015-85122034 | MS.gene05548:intron | 35.0% |
| !! | AAGAAACATGTTGGTGGTAT+TGG | + | chr6.2:85120820-85120839 | MS.gene05548:CDS | 35.0% |
| !! | TTTGTTGTTACTAGATTGGG+AGG | - | chr6.2:85122484-85122503 | None:intergenic | 35.0% |
| AAAAGTGGATCCGGATAGAT+GGG | + | chr6.2:85120738-85120757 | MS.gene05548:intron | 40.0% | |
| ACATCATGAAAGGAGGGATT+TGG | + | chr6.2:85123030-85123049 | MS.gene05548:CDS | 40.0% | |
| AGAAGATGAAGCTATGGTGA+TGG | + | chr6.2:85120921-85120940 | MS.gene05548:CDS | 40.0% | |
| AGAATCACAACAGACCCTTT+CGG | + | chr6.2:85122418-85122437 | MS.gene05548:intron | 40.0% | |
| ATGAAGGAACCAGAAAACAG+AGG | + | chr6.2:85122629-85122648 | MS.gene05548:intron | 40.0% | |
| ATGTAGATCTTGAAGGTGAG+TGG | - | chr6.2:85123014-85123033 | None:intergenic | 40.0% | |
| ATTCCCAGTTGGGTTATTCT+TGG | - | chr6.2:85122056-85122075 | None:intergenic | 40.0% | |
| CCACCTTCTAACAACGAAAA+AGG | - | chr6.2:85121546-85121565 | None:intergenic | 40.0% | |
| CGTCAAAAATCAGACCCTTT+CGG | + | chr6.2:85122366-85122385 | MS.gene05548:intron | 40.0% | |
| CTCAAGATGTATTCCCAGTT+GGG | - | chr6.2:85122066-85122085 | None:intergenic | 40.0% | |
| GATGGGAATTTGCGAATGAA+TGG | + | chr6.2:85120755-85120774 | MS.gene05548:intron | 40.0% | |
| GATGTTGATCAGTGAGCTAT+TGG | - | chr6.2:85122281-85122300 | None:intergenic | 40.0% | |
| GATTGTTTCGTAAACCCGAA+AGG | - | chr6.2:85122436-85122455 | None:intergenic | 40.0% | |
| GCGAATGAATGGTTTCTAAG+AGG | + | chr6.2:85120766-85120785 | MS.gene05548:intron | 40.0% | |
| GTCAAAAATCAGACCCTTTC+GGG | + | chr6.2:85122367-85122386 | MS.gene05548:intron | 40.0% | |
| GTTAGGAAGAAACATGTTGG+TGG | + | chr6.2:85120814-85120833 | MS.gene05548:CDS | 40.0% | |
| GTTTGAGGAAGATGAGGTAA+CGG | + | chr6.2:85121239-85121258 | MS.gene05548:CDS | 40.0% | |
| TCTCAAGATGTATTCCCAGT+TGG | - | chr6.2:85122067-85122086 | None:intergenic | 40.0% | |
| TTCCCAGTTGGGTTATTCTT+GGG | - | chr6.2:85122055-85122074 | None:intergenic | 40.0% | |
| TTCGCAAATTCCCATCTATC+CGG | - | chr6.2:85120751-85120770 | None:intergenic | 40.0% | |
| ! | AAAGTGTTACAAAGACTGGG+GGG | + | chr6.2:85122016-85122035 | MS.gene05548:intron | 40.0% |
| ! | CCGTCACAATTTTTCCGATT+TGG | + | chr6.2:85120528-85120547 | MS.gene05548:intron | 40.0% |
| ! | GAAAGGAGGGATTTGGATTT+TGG | + | chr6.2:85123037-85123056 | MS.gene05548:CDS | 40.0% |
| ! | GGGTCTGATTTTTGACGTAT+TGG | - | chr6.2:85122363-85122382 | None:intergenic | 40.0% |
| ! | TTGGTGGTATTGGAAATGGA+AGG | + | chr6.2:85120830-85120849 | MS.gene05548:CDS | 40.0% |
| !! | ACGCGTTGTTTTGCTTGAAA+GGG | - | chr6.2:85122316-85122335 | None:intergenic | 40.0% |
| !! | ACTTGGATTTGTTACCGTGT+TGG | - | chr6.2:85122257-85122276 | None:intergenic | 40.0% |
| !! | AGTTTGGACAGATGGGTTAT+AGG | + | chr6.2:85121373-85121392 | MS.gene05548:CDS | 40.0% |
| !! | CATGTTGGTGGTATTGGAAA+TGG | + | chr6.2:85120826-85120845 | MS.gene05548:CDS | 40.0% |
| !! | CCTTTTTCGTTGTTAGAAGG+TGG | + | chr6.2:85121543-85121562 | MS.gene05548:intron | 40.0% |
| !! | TACGCGTTGTTTTGCTTGAA+AGG | - | chr6.2:85122317-85122336 | None:intergenic | 40.0% |
| !! | TGTGATTCTAAAACCCCGAA+GGG | - | chr6.2:85122407-85122426 | None:intergenic | 40.0% |
| !! | TTGTGATTCTAAAACCCCGA+AGG | - | chr6.2:85122408-85122427 | None:intergenic | 40.0% |
| !!! | AGAAGGTGGCTTTTAGCTTT+TGG | + | chr6.2:85121557-85121576 | MS.gene05548:intron | 40.0% |
| AAGTGGTGCAGCTCAATAGA+CGG | + | chr6.2:85122980-85122999 | MS.gene05548:CDS | 45.0% | |
| ACAAACACAAAGCCGCAAGA+AGG | + | chr6.2:85122811-85122830 | MS.gene05548:CDS | 45.0% | |
| ACGCGTAAGAACTTAGATCG+AGG | + | chr6.2:85122330-85122349 | MS.gene05548:intron | 45.0% | |
| AGAAACCCAAAACGGCGAAA+AGG | + | chr6.2:85122944-85122963 | MS.gene05548:CDS | 45.0% | |
| AGTTGGGTTATTCTTGGGTC+AGG | - | chr6.2:85122050-85122069 | None:intergenic | 45.0% | |
| ATCAGTGAGCTATTGGCACT+TGG | - | chr6.2:85122274-85122293 | None:intergenic | 45.0% | |
| CAGATGGAGTTTGGACAGAT+GGG | + | chr6.2:85121366-85121385 | MS.gene05548:CDS | 45.0% | |
| CGCGTAAGAACTTAGATCGA+GGG | + | chr6.2:85122331-85122350 | MS.gene05548:intron | 45.0% | |
| CTATTCTCACCCCACATCAT+CGG | - | chr6.2:85121447-85121466 | None:intergenic | 45.0% | |
| CTTGATTTCGCACTCGTATG+CGG | - | chr6.2:85122162-85122181 | None:intergenic | 45.0% | |
| GAAAAGTGGATCCGGATAGA+TGG | + | chr6.2:85120737-85120756 | MS.gene05548:intron | 45.0% | |
| GAAACCCAAAACGGCGAAAA+GGG | + | chr6.2:85122945-85122964 | MS.gene05548:CDS | 45.0% | |
| GAATCACAACAGACCCTTTC+GGG | + | chr6.2:85122419-85122438 | MS.gene05548:intron | 45.0% | |
| GACCCAAGAATAACCCAACT+GGG | + | chr6.2:85122050-85122069 | MS.gene05548:intron | 45.0% | |
| GAGGTGAGAGAAACCCAAAA+CGG | + | chr6.2:85122936-85122955 | MS.gene05548:CDS | 45.0% | |
| GATGGAGTTTGAGGAAGATG+AGG | + | chr6.2:85121233-85121252 | MS.gene05548:CDS | 45.0% | |
| GGGTTTCAGAAAAGTGGATC+CGG | + | chr6.2:85120729-85120748 | MS.gene05548:intron | 45.0% | |
| GGTTGTTCTTAGGTGGTTGA+CGG | - | chr6.2:85122780-85122799 | None:intergenic | 45.0% | |
| GTTAAACGAACCAGACCCTT+CGG | + | chr6.2:85122389-85122408 | MS.gene05548:intron | 45.0% | |
| GTTGAGATCTGCAGATTCTC+TGG | - | chr6.2:85122602-85122621 | None:intergenic | 45.0% | |
| TCTATTGAGCTGCACCACTT+GGG | - | chr6.2:85122980-85122999 | None:intergenic | 45.0% | |
| TGACCCAAGAATAACCCAAC+TGG | + | chr6.2:85122049-85122068 | MS.gene05548:intron | 45.0% | |
| TTAAACGAACCAGACCCTTC+GGG | + | chr6.2:85122390-85122409 | MS.gene05548:intron | 45.0% | |
| TTCGGTGAAGATGGAGTTTG+AGG | + | chr6.2:85121224-85121243 | MS.gene05548:CDS | 45.0% | |
| TTGATTTCGCACTCGTATGC+GGG | - | chr6.2:85122161-85122180 | None:intergenic | 45.0% | |
| ! | AGTAGTAAAAAGGGGGGTGT+CGG | + | chr6.2:85121474-85121493 | MS.gene05548:CDS | 45.0% |
| ! | CTGGTTCGTTTAACCCGAAA+GGG | - | chr6.2:85122383-85122402 | None:intergenic | 45.0% |
| ! | GAAACGACGGTTGATATCTC+CGG | + | chr6.2:85121131-85121150 | MS.gene05548:CDS | 45.0% |
| ! | TCTGGTTCGTTTAACCCGAA+AGG | - | chr6.2:85122384-85122403 | None:intergenic | 45.0% |
| ! | TCTTGCGGCTTTGTGTTTGT+GGG | - | chr6.2:85122811-85122830 | None:intergenic | 45.0% |
| ! | TTCTTGCGGCTTTGTGTTTG+TGG | - | chr6.2:85122812-85122831 | None:intergenic | 45.0% |
| !! | GAGGGATTTGGATTTTGGCA+GGG | + | chr6.2:85123042-85123061 | MS.gene05548:CDS | 45.0% |
| !! | TGGATTTGTTACCGTGTTGG+CGG | - | chr6.2:85122254-85122273 | None:intergenic | 45.0% |
| !! | TGGATTTTGGCAGGGAAAGT+CGG | + | chr6.2:85123050-85123069 | MS.gene05548:CDS | 45.0% |
| !!! | GTTGGGTTTTGGGTTCATCA+AGG | + | chr6.2:85121848-85121867 | MS.gene05548:intron | 45.0% |
| AAGCAAAACGGTACCGTAGG+CGG | + | chr6.2:85122912-85122931 | MS.gene05548:CDS | 50.0% | |
| ACAACCAGGAGACAACTTGG+AGG | + | chr6.2:85122733-85122752 | MS.gene05548:CDS | 50.0% | |
| ACCACAACCAGGAGACAACT+TGG | + | chr6.2:85122730-85122749 | MS.gene05548:CDS | 50.0% | |
| CAGAAAACAGAGGCTGTGCA+AGG | + | chr6.2:85122639-85122658 | MS.gene05548:intron | 50.0% | |
| CTATTGAGCTGCACCACTTG+GGG | - | chr6.2:85122979-85122998 | None:intergenic | 50.0% | |
| CTGAAGCAAAACGGTACCGT+AGG | + | chr6.2:85122909-85122928 | MS.gene05548:CDS | 50.0% | |
| GCAGATGGAGTTTGGACAGA+TGG | + | chr6.2:85121365-85121384 | MS.gene05548:CDS | 50.0% | |
| GGCGTGATTGTGAAGTTCCA+CGG | + | chr6.2:85121394-85121413 | MS.gene05548:CDS | 50.0% | |
| GGTGTGTCGTGGTTGTTCTT+AGG | - | chr6.2:85122790-85122809 | None:intergenic | 50.0% | |
| GTCAACTTCCTCGGAGTCAT+CGG | + | chr6.2:85121185-85121204 | MS.gene05548:CDS | 50.0% | |
| GTCTATTGAGCTGCACCACT+TGG | - | chr6.2:85122981-85123000 | None:intergenic | 50.0% | |
| GTGTCGTGGTTGTTCTTAGG+TGG | - | chr6.2:85122787-85122806 | None:intergenic | 50.0% | |
| GTTGATATCTCCGGTGGCTA+AGG | + | chr6.2:85121140-85121159 | MS.gene05548:CDS | 50.0% | |
| GTTGTGGTTCGCGGATTTCT+CGG | - | chr6.2:85122718-85122737 | None:intergenic | 50.0% | |
| TAAACGAACCAGACCCTTCG+GGG | + | chr6.2:85122391-85122410 | MS.gene05548:intron | 50.0% | |
| TAACATGATGTCGTCGTCGC+CGG | + | chr6.2:85121269-85121288 | MS.gene05548:CDS | 50.0% | |
| TAGATGGGCCCCACTTGATA+AGG | - | chr6.2:85120283-85120302 | None:intergenic | 50.0% | |
| TATTGAGCTGCACCACTTGG+GGG | - | chr6.2:85122978-85122997 | None:intergenic | 50.0% | |
| TCAACTTCCTCGGAGTCATC+GGG | + | chr6.2:85121186-85121205 | MS.gene05548:CDS | 50.0% | |
| TCCAAGTTGTCTCCTGGTTG+TGG | - | chr6.2:85122734-85122753 | None:intergenic | 50.0% | |
| TGGGTAGCGAGAAAATTGCG+AGG | + | chr6.2:85120625-85120644 | MS.gene05548:intron | 50.0% | |
| TGTTCTTAGGTGGTTGACGG+CGG | - | chr6.2:85122777-85122796 | None:intergenic | 50.0% | |
| TTGTGAAGTTCCACGGATGC+CGG | + | chr6.2:85121401-85121420 | MS.gene05548:CDS | 50.0% | |
| TTGTGTTTGTGGGTGTGTCG+TGG | - | chr6.2:85122801-85122820 | None:intergenic | 50.0% | |
| ! | CTTGCACAGCCTCTGTTTTC+TGG | - | chr6.2:85122641-85122660 | None:intergenic | 50.0% |
| ! | GAGGAAGATGAGGTAACGGT+TGG | + | chr6.2:85121243-85121262 | MS.gene05548:CDS | 50.0% |
| ! | GGGGGAGATCTGAAGCAAAA+CGG | + | chr6.2:85122900-85122919 | MS.gene05548:CDS | 50.0% |
| ! | GGTGGCAAATTCGGTGAAGA+TGG | + | chr6.2:85121215-85121234 | MS.gene05548:CDS | 50.0% |
| !! | GATGGAGCGTCGCTGAATAT+AGG | - | chr6.2:85122694-85122713 | None:intergenic | 50.0% |
| !! | GGAGGGATTTGGATTTTGGC+AGG | + | chr6.2:85123041-85123060 | MS.gene05548:CDS | 50.0% |
| !! | GGTCTGGTGGTGGTTTGATT+CGG | - | chr6.2:85122871-85122890 | None:intergenic | 50.0% |
| !! | GTCTGGTGGTGGTTTGATTC+GGG | - | chr6.2:85122870-85122889 | None:intergenic | 50.0% |
| !! | TCGTCCCTTTTCGCCGTTTT+GGG | - | chr6.2:85122952-85122971 | None:intergenic | 50.0% |
| !! | TTCTAAAACCCCGAAGGGTC+TGG | - | chr6.2:85122402-85122421 | None:intergenic | 50.0% |
| AAACCACCACCAGACCGCAA+CGG | + | chr6.2:85122875-85122894 | MS.gene05548:CDS | 55.0% | |
| AACAGAGGCTGTGCAAGGTG+AGG | + | chr6.2:85122644-85122663 | MS.gene05548:intron | 55.0% | |
| GAAATCCGCGAACCACAACC+AGG | + | chr6.2:85122719-85122738 | MS.gene05548:CDS | 55.0% | |
| GAATGGATCGACCGCCAACA+CGG | + | chr6.2:85122240-85122259 | MS.gene05548:intron | 55.0% | |
| GATATCTCCGGTGGCTAAGG+CGG | + | chr6.2:85121143-85121162 | MS.gene05548:CDS | 55.0% | |
| GCTCGGATCTCCACTTTGGT+GGG | - | chr6.2:85122848-85122867 | None:intergenic | 55.0% | |
| GGCAACGACGTCAACTTCCT+CGG | + | chr6.2:85121176-85121195 | MS.gene05548:CDS | 55.0% | |
| GTTCGCGGATTTCTCGGTGA+TGG | - | chr6.2:85122712-85122731 | None:intergenic | 55.0% | |
| TACCACCGCGTAGATGCTCT+TGG | - | chr6.2:85122567-85122586 | None:intergenic | 55.0% | |
| TGTCTCCTGGTTGTGGTTCG+CGG | - | chr6.2:85122727-85122746 | None:intergenic | 55.0% | |
| TTCTCTCACCTCTCCGCCTA+CGG | - | chr6.2:85122928-85122947 | None:intergenic | 55.0% | |
| TTGGAGGCGAGGCAAAACAG+CGG | + | chr6.2:85122749-85122768 | MS.gene05548:CDS | 55.0% | |
| ! | ACGACGGTTGATATCTCCGG+TGG | + | chr6.2:85121134-85121153 | MS.gene05548:CDS | 55.0% |
| ! | GTCGTCCCTTTTCGCCGTTT+TGG | - | chr6.2:85122953-85122972 | None:intergenic | 55.0% |
| ! | TCCACTTTGGTGGGTGGTGT+CGG | - | chr6.2:85122839-85122858 | None:intergenic | 55.0% |
| !! | AGCCTCCAAGAGCATCTACG+CGG | + | chr6.2:85122559-85122578 | MS.gene05548:intron | 55.0% |
| !! | GGAGCGTCGCTGAATATAGG+TGG | - | chr6.2:85122691-85122710 | None:intergenic | 55.0% |
| !! | GTGGTGGTTTGATTCGGGCT+CGG | - | chr6.2:85122865-85122884 | None:intergenic | 55.0% |
| !! | GTGGTGTCGGTTCCTTCTTG+CGG | - | chr6.2:85122826-85122845 | None:intergenic | 55.0% |
| AAACGGTACCGTAGGCGGAG+AGG | + | chr6.2:85122917-85122936 | MS.gene05548:CDS | 60.0% | |
| ACCGACACCACCCACCAAAG+TGG | + | chr6.2:85122835-85122854 | MS.gene05548:CDS | 60.0% | |
| CACCGCGTAGATGCTCTTGG+AGG | - | chr6.2:85122564-85122583 | None:intergenic | 60.0% | |
| CACTCGTATGCGGGTTCGCT+GGG | - | chr6.2:85122152-85122171 | None:intergenic | 60.0% | |
| CAGGAGACAACTTGGAGGCG+AGG | + | chr6.2:85122738-85122757 | MS.gene05548:CDS | 60.0% | |
| CGGATCTCCACTTTGGTGGG+TGG | - | chr6.2:85122845-85122864 | None:intergenic | 60.0% | |
| CTCGCCTCCAAGTTGTCTCC+TGG | - | chr6.2:85122740-85122759 | None:intergenic | 60.0% | |
| GGCTCGGATCTCCACTTTGG+TGG | - | chr6.2:85122849-85122868 | None:intergenic | 60.0% | |
| GGGCATGGCGGTGGCAAATT+CGG | + | chr6.2:85121206-85121225 | MS.gene05548:CDS | 60.0% | |
| TCGGGCTCGGATCTCCACTT+TGG | - | chr6.2:85122852-85122871 | None:intergenic | 60.0% | |
| TGGTGGGGGCAGATGGAGTT+TGG | + | chr6.2:85121357-85121376 | MS.gene05548:CDS | 60.0% | |
| TTCCTCGGAGTCATCGGGCA+TGG | + | chr6.2:85121191-85121210 | MS.gene05548:CDS | 60.0% | |
| !! | ACGGATGCCGGTGTTGTCTC+CGG | + | chr6.2:85121413-85121432 | MS.gene05548:CDS | 60.0% |
| !! | CTCCAAGAGCATCTACGCGG+TGG | + | chr6.2:85122562-85122581 | MS.gene05548:intron | 60.0% |
| AAGGGACGACAGCCCCCAAG+TGG | + | chr6.2:85122963-85122982 | MS.gene05548:CDS | 65.0% | |
| ACCACCAGACCGCAACGGAC+GGG | + | chr6.2:85122880-85122899 | MS.gene05548:CDS | 65.0% | |
| ATGTCGTCGTCGCCGGAGCT+TGG | + | chr6.2:85121276-85121295 | MS.gene05548:CDS | 65.0% | |
| CACCACCAGACCGCAACGGA+CGG | + | chr6.2:85122879-85122898 | MS.gene05548:CDS | 65.0% | |
| CAGATCTCCCCCGTCCGTTG+CGG | - | chr6.2:85122892-85122911 | None:intergenic | 65.0% | |
| CTCGGAGTCATCGGGCATGG+CGG | + | chr6.2:85121194-85121213 | MS.gene05548:CDS | 65.0% | |
| GCACTCGTATGCGGGTTCGC+TGG | - | chr6.2:85122153-85122172 | None:intergenic | 65.0% | |
| GGAGACAACACCGGCATCCG+TGG | - | chr6.2:85121414-85121433 | None:intergenic | 65.0% | |
| TCACCCCACATCATCGGCGC+CGG | - | chr6.2:85121441-85121460 | None:intergenic | 65.0% | |
| TGACGTCGTTGCCGCCGTCA+CGG | - | chr6.2:85121169-85121188 | None:intergenic | 65.0% | |
| TTTGCACCGTGCACCACCGC+AGG | + | chr6.2:85121314-85121333 | MS.gene05548:CDS | 65.0% | |
| ACCACCGCAGGAGGTGGCTC+CGG | + | chr6.2:85121326-85121345 | MS.gene05548:CDS | 70.0% | |
| AGGTGGCTCCGGTGGGTGGT+TGG | + | chr6.2:85121337-85121356 | MS.gene05548:CDS | 70.0% | |
| CACCAGACCGCAACGGACGG+GGG | + | chr6.2:85122882-85122901 | MS.gene05548:CDS | 70.0% | |
| CCACCAGACCGCAACGGACG+GGG | + | chr6.2:85122881-85122900 | MS.gene05548:CDS | 70.0% | |
| CCACCTCCTGCGGTGGTGCA+CGG | - | chr6.2:85121323-85121342 | None:intergenic | 70.0% | |
| CGCCATGCCCGATGACTCCG+AGG | - | chr6.2:85121196-85121215 | None:intergenic | 70.0% | |
| CGTCCGTTGCGGTCTGGTGG+TGG | - | chr6.2:85122881-85122900 | None:intergenic | 70.0% | |
| GGAGTCATCGGGCATGGCGG+TGG | + | chr6.2:85121197-85121216 | MS.gene05548:CDS | 70.0% | |
| GGCTCCGGTGGGTGGTTGGT+GGG | + | chr6.2:85121341-85121360 | MS.gene05548:CDS | 70.0% | |
| GGTGGCTAAGGCGGCCGTGA+CGG | + | chr6.2:85121152-85121171 | MS.gene05548:CDS | 70.0% | |
| GTCACGGCCGCCTTAGCCAC+CGG | - | chr6.2:85121153-85121172 | None:intergenic | 70.0% | |
| TGCCCCCACCAACCACCCAC+CGG | - | chr6.2:85121348-85121367 | None:intergenic | 70.0% | |
| TGGCTCCGGTGGGTGGTTGG+TGG | + | chr6.2:85121340-85121359 | MS.gene05548:CDS | 70.0% | |
| ! | GCTCCGGTGGGTGGTTGGTG+GGG | + | chr6.2:85121342-85121361 | MS.gene05548:CDS | 70.0% |
| !! | CTCCGGTGGGTGGTTGGTGG+GGG | + | chr6.2:85121343-85121362 | MS.gene05548:CDS | 70.0% |
| !! | GGGTGGTTGGTGGGGGCAGA+TGG | + | chr6.2:85121350-85121369 | MS.gene05548:CDS | 70.0% |
| ACCGCAGGAGGTGGCTCCGG+TGG | + | chr6.2:85121329-85121348 | MS.gene05548:CDS | 75.0% | |
| ACCGGAGCCACCTCCTGCGG+TGG | - | chr6.2:85121330-85121349 | None:intergenic | 75.0% | |
| CAGGAGGTGGCTCCGGTGGG+TGG | + | chr6.2:85121333-85121352 | MS.gene05548:CDS | 75.0% | |
| CCCACCGGAGCCACCTCCTG+CGG | - | chr6.2:85121333-85121352 | None:intergenic | 75.0% | |
| CCCCGTCCGTTGCGGTCTGG+TGG | - | chr6.2:85122884-85122903 | None:intergenic | 75.0% | |
| CCGCAGGAGGTGGCTCCGGT+GGG | + | chr6.2:85121330-85121349 | MS.gene05548:CDS | 75.0% | |
| CCGTGCACCACCGCAGGAGG+TGG | + | chr6.2:85121320-85121339 | MS.gene05548:CDS | 75.0% | |
| CTCCCCCGTCCGTTGCGGTC+TGG | - | chr6.2:85122887-85122906 | None:intergenic | 75.0% | |
| GCACCGTGCACCACCGCAGG+AGG | + | chr6.2:85121317-85121336 | MS.gene05548:CDS | 75.0% | |
| GGCTAAGGCGGCCGTGACGG+CGG | + | chr6.2:85121155-85121174 | MS.gene05548:CDS | 75.0% | |
| ! | GCCGGCGCCGGAGACAACAC+CGG | - | chr6.2:85121423-85121442 | None:intergenic | 75.0% |
| !! | CACATCATCGGCGCCGGCGC+CGG | - | chr6.2:85121435-85121454 | None:intergenic | 75.0% |
| !! | GCCGGTGTTGTCTCCGGCGC+CGG | + | chr6.2:85121419-85121438 | MS.gene05548:CDS | 75.0% |
| !! | GCGCCGGCGCCGATGATGTG+GGG | + | chr6.2:85121435-85121454 | MS.gene05548:CDS | 75.0% |
| !! | GGCGCCGGCGCCGATGATGT+GGG | + | chr6.2:85121434-85121453 | MS.gene05548:CDS | 75.0% |
| !!! | CGGCGCCGGCGCCGATGATG+TGG | + | chr6.2:85121433-85121452 | MS.gene05548:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 85120200 | 85123105 | 85120200 | ID=MS.gene05548 |
| chr6.2 | mRNA | 85120200 | 85123105 | 85120200 | ID=MS.gene05548.t1;Parent=MS.gene05548 |
| chr6.2 | exon | 85120200 | 85120409 | 85120200 | ID=MS.gene05548.t1.exon1;Parent=MS.gene05548.t1 |
| chr6.2 | CDS | 85120200 | 85120409 | 85120200 | ID=cds.MS.gene05548.t1;Parent=MS.gene05548.t1 |
| chr6.2 | exon | 85120808 | 85121525 | 85120808 | ID=MS.gene05548.t1.exon2;Parent=MS.gene05548.t1 |
| chr6.2 | CDS | 85120808 | 85121525 | 85120808 | ID=cds.MS.gene05548.t1;Parent=MS.gene05548.t1 |
| chr6.2 | exon | 85122702 | 85123105 | 85122702 | ID=MS.gene05548.t1.exon3;Parent=MS.gene05548.t1 |
| chr6.2 | CDS | 85122702 | 85123105 | 85122702 | ID=cds.MS.gene05548.t1;Parent=MS.gene05548.t1 |
| Gene Sequence |
| Protein sequence |
