Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45703.t1 | KEH30418.1 | 94.6 | 354 | 19 | 0 | 1 | 354 | 1 | 354 | 1.70E-192 | 681.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45703.t1 | Q9LN62 | 68.4 | 358 | 106 | 3 | 1 | 352 | 71 | 427 | 3.9e-137 | 489.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45703.t1 | A0A072UN11 | 94.6 | 354 | 19 | 0 | 1 | 354 | 1 | 354 | 1.2e-192 | 681.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056683 | MS.gene45703 | 0.979309 | 1.09E-147 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45703.t1 | MTR_4g069390 | 94.633 | 354 | 19 | 0 | 1 | 354 | 1 | 354 | 0.0 | 701 |
| MS.gene45703.t1 | MTR_4g069420 | 89.076 | 357 | 34 | 1 | 3 | 354 | 73 | 429 | 0.0 | 659 |
| MS.gene45703.t1 | MTR_4g069350 | 88.418 | 354 | 39 | 1 | 1 | 354 | 80 | 431 | 0.0 | 642 |
| MS.gene45703.t1 | MTR_4g069300 | 83.193 | 357 | 55 | 1 | 1 | 352 | 80 | 436 | 0.0 | 615 |
| MS.gene45703.t1 | MTR_4g069260 | 80.392 | 357 | 64 | 2 | 1 | 352 | 80 | 435 | 0.0 | 598 |
| MS.gene45703.t1 | MTR_4g069430 | 87.611 | 339 | 42 | 0 | 15 | 353 | 83 | 421 | 0.0 | 595 |
| MS.gene45703.t1 | MTR_1g022025 | 72.543 | 346 | 90 | 1 | 12 | 352 | 82 | 427 | 0.0 | 530 |
| MS.gene45703.t1 | MTR_8g069400 | 29.557 | 203 | 119 | 8 | 71 | 267 | 1378 | 1562 | 1.40e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45703.t1 | AT1G19360 | 68.436 | 358 | 106 | 3 | 1 | 352 | 71 | 427 | 4.72e-180 | 506 |
| MS.gene45703.t1 | AT1G19360 | 68.436 | 358 | 106 | 3 | 1 | 352 | 71 | 427 | 4.72e-180 | 506 |
| MS.gene45703.t1 | AT1G75110 | 67.227 | 357 | 111 | 3 | 1 | 352 | 72 | 427 | 2.69e-179 | 504 |
| MS.gene45703.t1 | AT1G75120 | 65.909 | 352 | 112 | 3 | 1 | 352 | 59 | 402 | 1.84e-170 | 481 |
| MS.gene45703.t1 | AT1G70630 | 28.230 | 209 | 122 | 7 | 71 | 271 | 230 | 418 | 3.90e-14 | 73.9 |
| MS.gene45703.t1 | AT1G70630 | 28.230 | 209 | 122 | 7 | 71 | 271 | 446 | 634 | 4.93e-14 | 73.9 |
| MS.gene45703.t1 | AT1G70630 | 28.230 | 209 | 122 | 7 | 71 | 271 | 398 | 586 | 5.36e-14 | 73.6 |
| MS.gene45703.t1 | AT1G70630 | 28.230 | 209 | 122 | 7 | 71 | 271 | 261 | 449 | 5.47e-14 | 73.6 |
| MS.gene45703.t1 | AT1G70630 | 28.230 | 209 | 122 | 7 | 71 | 271 | 261 | 449 | 5.47e-14 | 73.6 |
| MS.gene45703.t1 | AT1G70630 | 28.230 | 209 | 122 | 7 | 71 | 271 | 477 | 665 | 5.60e-14 | 73.6 |
| MS.gene45703.t1 | AT1G70630 | 28.230 | 209 | 122 | 7 | 71 | 271 | 467 | 655 | 5.87e-14 | 73.6 |
Find 75 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGGTCTCTTTGGTAAAA+TGG | 0.133685 | 4.4:-38219789 | None:intergenic |
| CATCCCTTCAATTGAGCTTT+TGG | 0.214785 | 4.4:+38220124 | MS.gene45703:CDS |
| ATTGTTGAATATTATGTTAA+TGG | 0.251603 | 4.4:+38220395 | MS.gene45703:CDS |
| TAAGGCAACAACTAGATAAT+TGG | 0.263932 | 4.4:-38219727 | None:intergenic |
| CATAATAACATGACAGCTTA+TGG | 0.285401 | 4.4:+38219999 | MS.gene45703:CDS |
| CCTCTTTAATTGATGCAATA+TGG | 0.293872 | 4.4:-38219506 | None:intergenic |
| AACCAATATCCGGGTCTCTT+TGG | 0.310972 | 4.4:-38219797 | None:intergenic |
| TACCAAAGAGACCCGGATAT+TGG | 0.327747 | 4.4:+38219795 | MS.gene45703:CDS |
| CTTTGCAATCTCATCATCTA+AGG | 0.332611 | 4.4:-38219745 | None:intergenic |
| TTGTTGAATATTATGTTAAT+GGG | 0.345028 | 4.4:+38220396 | MS.gene45703:CDS |
| TCATGCTGCTAAAAGAACTA+TGG | 0.353213 | 4.4:+38220244 | MS.gene45703:CDS |
| TCTAATAAATTTGCCAATCT+CGG | 0.356388 | 4.4:-38219603 | None:intergenic |
| TATACCAACTCTCTTGATAT+TGG | 0.362843 | 4.4:-38219703 | None:intergenic |
| TAATTCAAGTGAATAATTAC+CGG | 0.395451 | 4.4:-38220341 | None:intergenic |
| CTAATAAATTTGCCAATCTC+GGG | 0.411225 | 4.4:-38219602 | None:intergenic |
| TGAATTCTTGAACCCGAGAT+TGG | 0.422149 | 4.4:+38219590 | MS.gene45703:CDS |
| CCGGGTCTCTTTGGTAAAAT+GGG | 0.423186 | 4.4:-38219788 | None:intergenic |
| AATTCATCAGGAGCAACATT+AGG | 0.424750 | 4.4:-38219573 | None:intergenic |
| TGATCATCTATACCGTGATT+CGG | 0.426234 | 4.4:+38219953 | MS.gene45703:CDS |
| GGGAAATGACGGAAAGGCTT+CGG | 0.439869 | 4.4:+38219463 | MS.gene45703:CDS |
| CATGTTAAAATCAGAATTTG+TGG | 0.440337 | 4.4:+38219398 | None:intergenic |
| ACAGTGTCAAAACCAATATC+CGG | 0.445951 | 4.4:-38219807 | None:intergenic |
| AGGATATTTGTTTACAATTG+TGG | 0.453481 | 4.4:+38220080 | MS.gene45703:CDS |
| CTCGGGTTCAAGAATTCATC+AGG | 0.455431 | 4.4:-38219585 | None:intergenic |
| CGAGGTGTACCATTGGGAAA+AGG | 0.456748 | 4.4:-38220437 | None:intergenic |
| CTCTTTCATCCATCACATCC+TGG | 0.487595 | 4.4:+38220209 | MS.gene45703:CDS |
| TAATCTCAGTAAATTGAAAC+CGG | 0.490101 | 4.4:+38220322 | MS.gene45703:CDS |
| AGCTCAATTGAAGGGATGGT+TGG | 0.490489 | 4.4:-38220119 | None:intergenic |
| CCTTCACATTTGAGTTTGCA+AGG | 0.492258 | 4.4:-38219659 | None:intergenic |
| TGAAGGAAATGCTCGAGGTC+TGG | 0.494327 | 4.4:+38219676 | MS.gene45703:CDS |
| GTCTTCGAAGACCCTGGGAT+GGG | 0.503992 | 4.4:+38220032 | MS.gene45703:CDS |
| TCACGGTATAGATGATCAAA+AGG | 0.505121 | 4.4:-38219948 | None:intergenic |
| AGGCTTCGGCTTGCAGAGCA+AGG | 0.512498 | 4.4:+38219477 | MS.gene45703:CDS |
| CGGTCCAAAAGCTCAATTGA+AGG | 0.514640 | 4.4:-38220128 | None:intergenic |
| CCACTAGACCAACCCATCCC+AGG | 0.518389 | 4.4:-38220044 | None:intergenic |
| CCATATTGCATCAATTAAAG+AGG | 0.518667 | 4.4:+38219506 | MS.gene45703:CDS |
| ATTACCACCGTGATAAGCTT+CGG | 0.519971 | 4.4:+38220360 | MS.gene45703:CDS |
| AACGATGTCTTCGAAGACCC+TGG | 0.520201 | 4.4:+38220026 | MS.gene45703:CDS |
| CCATCACATCCTGGTTATGA+CGG | 0.520532 | 4.4:+38220218 | MS.gene45703:CDS |
| CCTGGGATGGGTTGGTCTAG+TGG | 0.521581 | 4.4:+38220044 | MS.gene45703:CDS |
| GTTATTATGACCATCGCTCA+TGG | 0.530943 | 4.4:-38219985 | None:intergenic |
| GGTTATCGAGGTGTACCATT+GGG | 0.536774 | 4.4:-38220443 | None:intergenic |
| ATTGTAAACAAATATCCTCC+TGG | 0.543398 | 4.4:-38220075 | None:intergenic |
| ATCAGGAGCAACATTAGGAC+TGG | 0.543690 | 4.4:-38219568 | None:intergenic |
| TCGAAGACCCTGGGATGGGT+TGG | 0.544120 | 4.4:+38220036 | MS.gene45703:CDS |
| CAAAAGCTCAATTGAAGGGA+TGG | 0.548256 | 4.4:-38220123 | None:intergenic |
| GCATGAAGCCCGTCATAACC+AGG | 0.559070 | 4.4:-38220227 | None:intergenic |
| TCATTCGCCGAAGCTTATCA+CGG | 0.559537 | 4.4:-38220367 | None:intergenic |
| CATCACATCCTGGTTATGAC+GGG | 0.559997 | 4.4:+38220219 | MS.gene45703:CDS |
| GAAAAGGTTTGAGAGCGTCT+TGG | 0.567598 | 4.4:-38220421 | None:intergenic |
| AAAACAGTTGAGGGAAATGA+CGG | 0.571564 | 4.4:+38219452 | MS.gene45703:CDS |
| CTTCACATTTGAGTTTGCAA+GGG | 0.571821 | 4.4:-38219658 | None:intergenic |
| TCGAAAGTCGTGCTGCCACA+CGG | 0.575082 | 4.4:-38220148 | None:intergenic |
| CACTAGACCAACCCATCCCA+GGG | 0.582249 | 4.4:-38220043 | None:intergenic |
| CCTTGCAAACTCAAATGTGA+AGG | 0.591600 | 4.4:+38219659 | MS.gene45703:CDS |
| CAGTGTCAAAACCAATATCC+GGG | 0.592081 | 4.4:-38219806 | None:intergenic |
| ATTGCCTTGACAGTACCAAA+AGG | 0.592822 | 4.4:-38219540 | None:intergenic |
| TTCACCAATATCAAGAGAGT+TGG | 0.596908 | 4.4:+38219699 | MS.gene45703:CDS |
| AGGTTATCGAGGTGTACCAT+TGG | 0.601144 | 4.4:-38220444 | None:intergenic |
| TGTCTTCGAAGACCCTGGGA+TGG | 0.601932 | 4.4:+38220031 | MS.gene45703:CDS |
| ACGATGTCTTCGAAGACCCT+GGG | 0.602485 | 4.4:+38220027 | MS.gene45703:CDS |
| CCGTCATAACCAGGATGTGA+TGG | 0.606127 | 4.4:-38220218 | None:intergenic |
| GTTCCTCGTTGAAAACGACT+TGG | 0.612096 | 4.4:-38220187 | None:intergenic |
| TGTGGCAGCACGACTTTCGA+AGG | 0.620454 | 4.4:+38220151 | MS.gene45703:CDS |
| GGTCCAAAAGCTCAATTGAA+GGG | 0.628652 | 4.4:-38220127 | None:intergenic |
| GATGTTGAGTCCATGAGCGA+TGG | 0.629878 | 4.4:+38219975 | MS.gene45703:CDS |
| TGGACTCAACATCCGAATCA+CGG | 0.631798 | 4.4:-38219965 | None:intergenic |
| GGCTTCGGCTTGCAGAGCAA+GGG | 0.638726 | 4.4:+38219478 | MS.gene45703:CDS |
| AGTTGAGGGAAATGACGGAA+AGG | 0.639933 | 4.4:+38219457 | MS.gene45703:CDS |
| TAGAATACGAAATTTAAGCG+TGG | 0.644770 | 4.4:-38219859 | None:intergenic |
| AAATGTGAAGGAAATGCTCG+AGG | 0.650279 | 4.4:+38219671 | MS.gene45703:CDS |
| GAGATTAGCATCATTCCTCA+CGG | 0.654966 | 4.4:-38220306 | None:intergenic |
| GAAAATCGCAGTTAAACGAG+AGG | 0.662166 | 4.4:+38219626 | MS.gene45703:CDS |
| ACACAGAAACAAGGTTATCG+AGG | 0.668454 | 4.4:-38220455 | None:intergenic |
| TTCGCCGAAGCTTATCACGG+TGG | 0.734041 | 4.4:-38220364 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTGAATATTATGTTAA+TGG | + | chr4.4:38220395-38220414 | MS.gene45703:CDS | 15.0% |
| !! | TTGTTGAATATTATGTTAAT+GGG | + | chr4.4:38220396-38220415 | MS.gene45703:CDS | 15.0% |
| !! | TAATTCAAGTGAATAATTAC+CGG | - | chr4.4:38220344-38220363 | None:intergenic | 20.0% |
| ! | AGGATATTTGTTTACAATTG+TGG | + | chr4.4:38220080-38220099 | MS.gene45703:CDS | 25.0% |
| ! | TAATCTCAGTAAATTGAAAC+CGG | + | chr4.4:38220322-38220341 | MS.gene45703:CDS | 25.0% |
| ! | TCTAATAAATTTGCCAATCT+CGG | - | chr4.4:38219606-38219625 | None:intergenic | 25.0% |
| ACTGTTGGAAAAATTGCAAA+CGG | + | chr4.4:38219825-38219844 | MS.gene45703:CDS | 30.0% | |
| AGAGCTAAAAAAACAGTTGA+GGG | + | chr4.4:38219443-38219462 | MS.gene45703:CDS | 30.0% | |
| ATTGTAAACAAATATCCTCC+TGG | - | chr4.4:38220078-38220097 | None:intergenic | 30.0% | |
| CATAATAACATGACAGCTTA+TGG | + | chr4.4:38219999-38220018 | MS.gene45703:CDS | 30.0% | |
| CCATATTGCATCAATTAAAG+AGG | + | chr4.4:38219506-38219525 | MS.gene45703:CDS | 30.0% | |
| CCTCTTTAATTGATGCAATA+TGG | - | chr4.4:38219509-38219528 | None:intergenic | 30.0% | |
| CTAATAAATTTGCCAATCTC+GGG | - | chr4.4:38219605-38219624 | None:intergenic | 30.0% | |
| TAAGGCAACAACTAGATAAT+TGG | - | chr4.4:38219730-38219749 | None:intergenic | 30.0% | |
| TAGAATACGAAATTTAAGCG+TGG | - | chr4.4:38219862-38219881 | None:intergenic | 30.0% | |
| TATACCAACTCTCTTGATAT+TGG | - | chr4.4:38219706-38219725 | None:intergenic | 30.0% | |
| TCAATTAAAGAGGAAAAAGC+TGG | + | chr4.4:38219516-38219535 | MS.gene45703:CDS | 30.0% | |
| ! | CTAAGAGAATTTTTGCAGTT+GGG | + | chr4.4:38219879-38219898 | MS.gene45703:CDS | 30.0% |
| ! | TCTAAGAGAATTTTTGCAGT+TGG | + | chr4.4:38219878-38219897 | MS.gene45703:CDS | 30.0% |
| AAAACAGTTGAGGGAAATGA+CGG | + | chr4.4:38219452-38219471 | MS.gene45703:CDS | 35.0% | |
| AATTCATCAGGAGCAACATT+AGG | - | chr4.4:38219576-38219595 | None:intergenic | 35.0% | |
| ACAGTGTCAAAACCAATATC+CGG | - | chr4.4:38219810-38219829 | None:intergenic | 35.0% | |
| CAGAGCTAAAAAAACAGTTG+AGG | + | chr4.4:38219442-38219461 | MS.gene45703:CDS | 35.0% | |
| CTTTGCAATCTCATCATCTA+AGG | - | chr4.4:38219748-38219767 | None:intergenic | 35.0% | |
| TCACGGTATAGATGATCAAA+AGG | - | chr4.4:38219951-38219970 | None:intergenic | 35.0% | |
| TCATGCTGCTAAAAGAACTA+TGG | + | chr4.4:38220244-38220263 | MS.gene45703:CDS | 35.0% | |
| TGATCATCTATACCGTGATT+CGG | + | chr4.4:38219953-38219972 | MS.gene45703:CDS | 35.0% | |
| TTCACCAATATCAAGAGAGT+TGG | + | chr4.4:38219699-38219718 | MS.gene45703:CDS | 35.0% | |
| ! | ACTTTCGAAGGAAAAAGCAT+GGG | + | chr4.4:38220163-38220182 | MS.gene45703:CDS | 35.0% |
| ! | CTTCACATTTGAGTTTGCAA+GGG | - | chr4.4:38219661-38219680 | None:intergenic | 35.0% |
| !!! | GATATTGGTTTTGACACTGT+TGG | + | chr4.4:38219810-38219829 | MS.gene45703:CDS | 35.0% |
| AAATGTGAAGGAAATGCTCG+AGG | + | chr4.4:38219671-38219690 | MS.gene45703:CDS | 40.0% | |
| ATTACCACCGTGATAAGCTT+CGG | + | chr4.4:38220360-38220379 | MS.gene45703:CDS | 40.0% | |
| ATTGCCTTGACAGTACCAAA+AGG | - | chr4.4:38219543-38219562 | None:intergenic | 40.0% | |
| CAAAAGCTCAATTGAAGGGA+TGG | - | chr4.4:38220126-38220145 | None:intergenic | 40.0% | |
| CAGTGTCAAAACCAATATCC+GGG | - | chr4.4:38219809-38219828 | None:intergenic | 40.0% | |
| CCTTGCAAACTCAAATGTGA+AGG | + | chr4.4:38219659-38219678 | MS.gene45703:CDS | 40.0% | |
| GAAAATCGCAGTTAAACGAG+AGG | + | chr4.4:38219626-38219645 | MS.gene45703:CDS | 40.0% | |
| GACTTTCGAAGGAAAAAGCA+TGG | + | chr4.4:38220162-38220181 | MS.gene45703:CDS | 40.0% | |
| GAGATTAGCATCATTCCTCA+CGG | - | chr4.4:38220309-38220328 | None:intergenic | 40.0% | |
| GGTCCAAAAGCTCAATTGAA+GGG | - | chr4.4:38220130-38220149 | None:intergenic | 40.0% | |
| GTTATTATGACCATCGCTCA+TGG | - | chr4.4:38219988-38220007 | None:intergenic | 40.0% | |
| TGAATTCTTGAACCCGAGAT+TGG | + | chr4.4:38219590-38219609 | MS.gene45703:CDS | 40.0% | |
| ! | CATCCCTTCAATTGAGCTTT+TGG | + | chr4.4:38220124-38220143 | MS.gene45703:CDS | 40.0% |
| ! | CCTTCACATTTGAGTTTGCA+AGG | - | chr4.4:38219662-38219681 | None:intergenic | 40.0% |
| AACCAATATCCGGGTCTCTT+TGG | - | chr4.4:38219800-38219819 | None:intergenic | 45.0% | |
| AGCTCAATTGAAGGGATGGT+TGG | - | chr4.4:38220122-38220141 | None:intergenic | 45.0% | |
| ATCAGGAGCAACATTAGGAC+TGG | - | chr4.4:38219571-38219590 | None:intergenic | 45.0% | |
| CATCACATCCTGGTTATGAC+GGG | + | chr4.4:38220219-38220238 | MS.gene45703:CDS | 45.0% | |
| CCATCACATCCTGGTTATGA+CGG | + | chr4.4:38220218-38220237 | MS.gene45703:CDS | 45.0% | |
| CCGGGTCTCTTTGGTAAAAT+GGG | - | chr4.4:38219791-38219810 | None:intergenic | 45.0% | |
| CGGTCCAAAAGCTCAATTGA+AGG | - | chr4.4:38220131-38220150 | None:intergenic | 45.0% | |
| CTCGGGTTCAAGAATTCATC+AGG | - | chr4.4:38219588-38219607 | None:intergenic | 45.0% | |
| CTCTTTCATCCATCACATCC+TGG | + | chr4.4:38220209-38220228 | MS.gene45703:CDS | 45.0% | |
| GTTCCTCGTTGAAAACGACT+TGG | - | chr4.4:38220190-38220209 | None:intergenic | 45.0% | |
| TACCAAAGAGACCCGGATAT+TGG | + | chr4.4:38219795-38219814 | MS.gene45703:CDS | 45.0% | |
| TCATTCGCCGAAGCTTATCA+CGG | - | chr4.4:38220370-38220389 | None:intergenic | 45.0% | |
| TCCGGGTCTCTTTGGTAAAA+TGG | - | chr4.4:38219792-38219811 | None:intergenic | 45.0% | |
| TGGAAAAATTGCAAACGGCG+CGG | + | chr4.4:38219830-38219849 | MS.gene45703:CDS | 45.0% | |
| TGGACTCAACATCCGAATCA+CGG | - | chr4.4:38219968-38219987 | None:intergenic | 45.0% | |
| ! | AATTGAGCTTTTGGACCGTG+TGG | + | chr4.4:38220133-38220152 | MS.gene45703:CDS | 45.0% |
| ! | AGTTGAGGGAAATGACGGAA+AGG | + | chr4.4:38219457-38219476 | MS.gene45703:CDS | 45.0% |
| ! | CCCATTTTACCAAAGAGACC+CGG | + | chr4.4:38219788-38219807 | MS.gene45703:CDS | 45.0% |
| ! | GAGGAAAAAGCTGGACCTTT+TGG | + | chr4.4:38219525-38219544 | MS.gene45703:CDS | 45.0% |
| ! | GCTCTCAAACCTTTTCCCAA+TGG | + | chr4.4:38220428-38220447 | MS.gene45703:CDS | 45.0% |
| ! | TGGACCTTTTGGTACTGTCA+AGG | + | chr4.4:38219536-38219555 | MS.gene45703:CDS | 45.0% |
| !! | GAAAAGGTTTGAGAGCGTCT+TGG | - | chr4.4:38220424-38220443 | None:intergenic | 45.0% |
| !! | GAGTTCTTTTCAAGACCGTG+AGG | + | chr4.4:38220291-38220310 | MS.gene45703:CDS | 45.0% |
| AACGATGTCTTCGAAGACCC+TGG | + | chr4.4:38220026-38220045 | MS.gene45703:CDS | 50.0% | |
| ACGATGTCTTCGAAGACCCT+GGG | + | chr4.4:38220027-38220046 | MS.gene45703:CDS | 50.0% | |
| CCGTCATAACCAGGATGTGA+TGG | - | chr4.4:38220221-38220240 | None:intergenic | 50.0% | |
| CGAGGTGTACCATTGGGAAA+AGG | - | chr4.4:38220440-38220459 | None:intergenic | 50.0% | |
| GATGTTGAGTCCATGAGCGA+TGG | + | chr4.4:38219975-38219994 | MS.gene45703:CDS | 50.0% | |
| TGAAGGAAATGCTCGAGGTC+TGG | + | chr4.4:38219676-38219695 | MS.gene45703:CDS | 50.0% | |
| ! | CTAGTGGCGTTTTTACCAGG+AGG | + | chr4.4:38220060-38220079 | MS.gene45703:CDS | 50.0% |
| ! | GGGAAATGACGGAAAGGCTT+CGG | + | chr4.4:38219463-38219482 | MS.gene45703:CDS | 50.0% |
| ! | GGTCTAGTGGCGTTTTTACC+AGG | + | chr4.4:38220057-38220076 | MS.gene45703:CDS | 50.0% |
| !! | GGACCAAGTCGTTTTCAACG+AGG | + | chr4.4:38220184-38220203 | MS.gene45703:CDS | 50.0% |
| CACTAGACCAACCCATCCCA+GGG | - | chr4.4:38220046-38220065 | None:intergenic | 55.0% | |
| GCATGAAGCCCGTCATAACC+AGG | - | chr4.4:38220230-38220249 | None:intergenic | 55.0% | |
| GTCTTCGAAGACCCTGGGAT+GGG | + | chr4.4:38220032-38220051 | MS.gene45703:CDS | 55.0% | |
| TCGAAAGTCGTGCTGCCACA+CGG | - | chr4.4:38220151-38220170 | None:intergenic | 55.0% | |
| TGTCTTCGAAGACCCTGGGA+TGG | + | chr4.4:38220031-38220050 | MS.gene45703:CDS | 55.0% | |
| TGTGGCAGCACGACTTTCGA+AGG | + | chr4.4:38220151-38220170 | MS.gene45703:CDS | 55.0% | |
| TTCGCCGAAGCTTATCACGG+TGG | - | chr4.4:38220367-38220386 | None:intergenic | 55.0% | |
| CCACTAGACCAACCCATCCC+AGG | - | chr4.4:38220047-38220066 | None:intergenic | 60.0% | |
| TCGAAGACCCTGGGATGGGT+TGG | + | chr4.4:38220036-38220055 | MS.gene45703:CDS | 60.0% | |
| ! | AGGCTTCGGCTTGCAGAGCA+AGG | + | chr4.4:38219477-38219496 | MS.gene45703:CDS | 60.0% |
| ! | GGCTTCGGCTTGCAGAGCAA+GGG | + | chr4.4:38219478-38219497 | MS.gene45703:CDS | 60.0% |
| !! | CCTGGGATGGGTTGGTCTAG+TGG | + | chr4.4:38220044-38220063 | MS.gene45703:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 38219399 | 38220463 | 38219399 | ID=MS.gene45703 |
| chr4.4 | mRNA | 38219399 | 38220463 | 38219399 | ID=MS.gene45703.t1;Parent=MS.gene45703 |
| chr4.4 | exon | 38219399 | 38220463 | 38219399 | ID=MS.gene45703.t1.exon1;Parent=MS.gene45703.t1 |
| chr4.4 | CDS | 38219399 | 38220463 | 38219399 | ID=cds.MS.gene45703.t1;Parent=MS.gene45703.t1 |
| Gene Sequence |
| Protein sequence |
