AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45979

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45979.t1 AT4G13870 34.416 154 96 4 78 229 128 278 2.23e-21 90.5
MS.gene45979.t1 AT4G13870 34.416 154 96 4 78 229 128 278 3.37e-21 90.1
MS.gene45979.t1 AT3G12410 28.638 213 126 7 38 226 12 222 1.98e-18 81.3
MS.gene45979.t1 AT2G36110 31.148 183 114 5 46 226 26 198 1.81e-16 76.3
MS.gene45979.t1 AT3G12460 26.455 189 111 4 66 226 43 231 2.13e-14 70.5
MS.gene45979.t1 AT3G12470 31.410 156 103 4 73 226 51 204 6.92e-14 68.9
MS.gene45979.t1 AT3G12430 31.206 141 94 3 88 226 91 230 1.11e-13 68.6
MS.gene45979.t1 AT3G12440 30.588 170 110 5 66 228 179 347 6.51e-13 67.4
MS.gene45979.t1 AT3G12420 27.273 165 69 4 42 165 24 178 4.02e-12 63.2

Find 93 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGTGTGGGGTTTGGGTT+GGG 0.160617 7.2:-44379406 None:intergenic
TTGGTGTGGGGTTTGGGTTG+GGG 0.244332 7.2:-44379405 None:intergenic
GTGGGGTTTGGGTTGGGGAT+TGG 0.257402 7.2:-44379400 None:intergenic
GAAGAGGGAAGTGGGGATGG+AGG 0.262914 7.2:-44379707 None:intergenic
GGTTGGTGTGGGGTTTGGGT+TGG 0.282238 7.2:-44379407 None:intergenic
CGAGGATTACGAGGAGTAGA+TGG 0.299164 7.2:+44379938 MS.gene45979:CDS
GGGATAATCCATGGCTTGAT+TGG 0.299611 7.2:+44379959 MS.gene45979:CDS
GATTGGCCGCGTTGGGAGTT+AGG 0.303341 7.2:-44379616 None:intergenic
AAGTGGGGATGGAGGGAGAG+TGG 0.328316 7.2:-44379699 None:intergenic
GGGACCAGGTGAGGAGGGTT+TGG 0.329969 7.2:-44379516 None:intergenic
TCGAGATGGGTGTGTCGTTT+TGG 0.340187 7.2:-44379375 None:intergenic
ACACCGACGAATCTGTTGTT+AGG 0.342221 7.2:-44379745 None:intergenic
AGGAAGGTGAAGAGGGAAGT+GGG 0.344657 7.2:-44379715 None:intergenic
ACATTAGCGGAACGTGTTCT+TGG 0.348714 7.2:+44379895 MS.gene45979:CDS
ATGTCGAGGCCGATGATTGC+GGG 0.358531 7.2:-44379583 None:intergenic
TGGGTTGGATTGGCCGCGTT+GGG 0.360911 7.2:-44379623 None:intergenic
GTAGGTGTTGTGGGTGTCGT+GGG 0.366338 7.2:-44379464 None:intergenic
CCCCTTCTCACGTCGACACC+TGG 0.375028 7.2:+44379536 MS.gene45979:CDS
GGTGAAGAGGGAAGTGGGGA+TGG 0.395784 7.2:-44379710 None:intergenic
CTGGGTTGGATTGGCCGCGT+TGG 0.402456 7.2:-44379624 None:intergenic
GGGAGAGGGATTGGGTTTCG+AGG 0.410114 7.2:-44379561 None:intergenic
CAGAGTTGAAGAGTGGCGGC+TGG 0.416533 7.2:-44379643 None:intergenic
TCGTCGTCTTTATTCTCATC+AGG 0.417576 7.2:+44380032 MS.gene45979:CDS
GAGGAAGGTGAAGAGGGAAG+TGG 0.420070 7.2:-44379716 None:intergenic
GTTAGAGAGGAAGGTGAAGA+GGG 0.423894 7.2:-44379722 None:intergenic
GTTGTTAGGGTTAGAGAGGA+AGG 0.431930 7.2:-44379731 None:intergenic
CATTAGCGGAACGTGTTCTT+GGG 0.435126 7.2:+44379896 MS.gene45979:CDS
GAAGATAAGGCAGCGGTTGT+TGG 0.443797 7.2:-44379668 None:intergenic
TCGATGAGGGTGATGTTGAA+GGG 0.444158 7.2:-44379430 None:intergenic
TGGAGGGAGAGTGGATGAGA+TGG 0.445211 7.2:-44379690 None:intergenic
AAGAGGGAAGTGGGGATGGA+GGG 0.448992 7.2:-44379706 None:intergenic
GTCGATGAGGGTGATGTTGA+AGG 0.449737 7.2:-44379431 None:intergenic
AGTGGATGAGATGGAAGATA+AGG 0.451037 7.2:-44379681 None:intergenic
TTGAAGAGTGGCGGCTGGGT+TGG 0.453694 7.2:-44379638 None:intergenic
GGAAGGTGAAGAGGGAAGTG+GGG 0.462479 7.2:-44379714 None:intergenic
GAGGGTTTGGATGGTGAAGG+TGG 0.465836 7.2:-44379503 None:intergenic
GGTGATGGAGTAGGTGTTGT+GGG 0.466954 7.2:-44379473 None:intergenic
AGTAGGTGTTGTGGGTGTCG+TGG 0.467758 7.2:-44379465 None:intergenic
GGATAATCCATGGCTTGATT+GGG 0.471317 7.2:+44379960 MS.gene45979:CDS
TCCATGGCTTGATTGGGATC+AGG 0.472812 7.2:+44379966 MS.gene45979:CDS
AGCCAGGTGTCGACGTGAGA+AGG 0.472968 7.2:-44379538 None:intergenic
ATCGTGATTTGTTGAGAAGT+GGG 0.475315 7.2:+44379866 MS.gene45979:CDS
GTTGGGGATTGGCATCGAGA+TGG 0.475970 7.2:-44379389 None:intergenic
GAGTGGCGGCTGGGTTGGAT+TGG 0.480987 7.2:-44379633 None:intergenic
TTGGGGATTGGCATCGAGAT+GGG 0.484393 7.2:-44379388 None:intergenic
GGTTAGAGAGGAAGGTGAAG+AGG 0.488884 7.2:-44379723 None:intergenic
CCATCCAAACCCTCCTCACC+TGG 0.499536 7.2:+44379512 MS.gene45979:CDS
GCCAGGTGTCGACGTGAGAA+GGG 0.499887 7.2:-44379537 None:intergenic
CCTTGCTGCTGAGGTGCTTG+AGG 0.505955 7.2:+44379843 MS.gene45979:CDS
TTCTATAAGCTTCTCGATGT+CGG 0.506830 7.2:-44379779 None:intergenic
CACCGACGAATCTGTTGTTA+GGG 0.519688 7.2:-44379744 None:intergenic
GAAGGTGGTGTCGATGGTGA+TGG 0.522246 7.2:-44379488 None:intergenic
CGATGAGGGTGATGTTGAAG+GGG 0.525569 7.2:-44379429 None:intergenic
AACAACAGATTCGTCGGTGT+CGG 0.527768 7.2:+44379748 MS.gene45979:CDS
GGATTGGGTTTCGAGGAGCC+AGG 0.529516 7.2:-44379554 None:intergenic
TAGGTGTTGTGGGTGTCGTG+GGG 0.545739 7.2:-44379463 None:intergenic
GGGGAGGGAGTTGTCGATGA+GGG 0.548427 7.2:-44379443 None:intergenic
GTCGACGTGAGAAGGGGACC+AGG 0.552546 7.2:-44379530 None:intergenic
GAGAAGGGGACCAGGTGAGG+AGG 0.554583 7.2:-44379522 None:intergenic
TCATCGGCCTCGACATCGAA+TGG 0.559761 7.2:+44379590 MS.gene45979:CDS
ATCTGTTGTTAGGGTTAGAG+AGG 0.563682 7.2:-44379735 None:intergenic
TTTACGAAACCTTGCTGCTG+AGG 0.563801 7.2:+44379834 MS.gene45979:CDS
GATGGTGAAGGTGGTGTCGA+TGG 0.566837 7.2:-44379494 None:intergenic
CCAGGTGAGGAGGGTTTGGA+TGG 0.567563 7.2:-44379512 None:intergenic
GAGGATTACGAGGAGTAGAT+GGG 0.571746 7.2:+44379939 MS.gene45979:CDS
GGTGTCGATGGTGATGGAGT+AGG 0.574890 7.2:-44379482 None:intergenic
GGAGTAGATGGGATAATCCA+TGG 0.576923 7.2:+44379950 MS.gene45979:CDS
AGGTGTTGTGGGTGTCGTGG+GGG 0.579595 7.2:-44379462 None:intergenic
TGTCGAGGCCGATGATTGCG+GGG 0.579688 7.2:-44379582 None:intergenic
AACCCTAACAACAGATTCGT+CGG 0.580081 7.2:+44379742 MS.gene45979:CDS
TGGTGATGGAGTAGGTGTTG+TGG 0.580668 7.2:-44379474 None:intergenic
ACCTGATCCCAATCAAGCCA+TGG 0.590317 7.2:-44379967 None:intergenic
AGAAGGGGACCAGGTGAGGA+GGG 0.593387 7.2:-44379521 None:intergenic
CGTGAGAAGGGGACCAGGTG+AGG 0.595883 7.2:-44379525 None:intergenic
GAGGAGGGTTTGGATGGTGA+AGG 0.599653 7.2:-44379506 None:intergenic
GATCGTGATTTGTTGAGAAG+TGG 0.602959 7.2:+44379865 MS.gene45979:CDS
CCAGGTGTCGACGTGAGAAG+GGG 0.603024 7.2:-44379536 None:intergenic
GATGTCGAGGCCGATGATTG+CGG 0.603787 7.2:-44379584 None:intergenic
AGAGTTGAAGAGTGGCGGCT+GGG 0.620008 7.2:-44379642 None:intergenic
TAAATCAACATAATTAGCAA+CGG 0.621587 7.2:-44379815 None:intergenic
GATGAGGGTGATGTTGAAGG+GGG 0.631260 7.2:-44379428 None:intergenic
CCTCAAGCACCTCAGCAGCA+AGG 0.632236 7.2:-44379843 None:intergenic
AAGTGGGATTAAGACATTAG+CGG 0.633283 7.2:+44379882 MS.gene45979:CDS
CTACTCCTCGTAATCCTCGA+CGG 0.639971 7.2:-44379934 None:intergenic
AGAAACCGTCGAGGATTACG+AGG 0.646063 7.2:+44379929 MS.gene45979:CDS
TAGGACGCCATTCGATGTCG+AGG 0.651649 7.2:-44379597 None:intergenic
GTTGGTGCAGAGTTGAAGAG+TGG 0.654868 7.2:-44379650 None:intergenic
TGAGATGGAAGATAAGGCAG+CGG 0.659112 7.2:-44379675 None:intergenic
GTCGAGGCCGATGATTGCGG+GGG 0.672413 7.2:-44379581 None:intergenic
GGTGCAGAGTTGAAGAGTGG+CGG 0.676268 7.2:-44379647 None:intergenic
CAACATAATTAGCAACGGTG+AGG 0.681239 7.2:-44379810 None:intergenic
AGATTGTTGAGAAACCGTCG+AGG 0.740766 7.2:+44379920 MS.gene45979:CDS
TGGCGTCCTAACTCCCAACG+CGG 0.787643 7.2:+44379610 MS.gene45979:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATCAACATAATTAGCAA+CGG - chr7.2:44379818-44379837 None:intergenic 20.0%
AAGTGGGATTAAGACATTAG+CGG + chr7.2:44379882-44379901 MS.gene45979:CDS 35.0%
TTCTATAAGCTTCTCGATGT+CGG - chr7.2:44379782-44379801 None:intergenic 35.0%
!! ATCGTGATTTGTTGAGAAGT+GGG + chr7.2:44379866-44379885 MS.gene45979:CDS 35.0%
AACCCTAACAACAGATTCGT+CGG + chr7.2:44379742-44379761 MS.gene45979:CDS 40.0%
AGTGGATGAGATGGAAGATA+AGG - chr7.2:44379684-44379703 None:intergenic 40.0%
ATCTGTTGTTAGGGTTAGAG+AGG - chr7.2:44379738-44379757 None:intergenic 40.0%
CAACATAATTAGCAACGGTG+AGG - chr7.2:44379813-44379832 None:intergenic 40.0%
GGATAATCCATGGCTTGATT+GGG + chr7.2:44379960-44379979 MS.gene45979:CDS 40.0%
TCGTCGTCTTTATTCTCATC+AGG + chr7.2:44380032-44380051 MS.gene45979:CDS 40.0%
! TTTTGGTCAACGAGGGTAAT+CGG - chr7.2:44379361-44379380 None:intergenic 40.0%
!! GATCGTGATTTGTTGAGAAG+TGG + chr7.2:44379865-44379884 MS.gene45979:CDS 40.0%
AACAACAGATTCGTCGGTGT+CGG + chr7.2:44379748-44379767 MS.gene45979:CDS 45.0%
ACACCGACGAATCTGTTGTT+AGG - chr7.2:44379748-44379767 None:intergenic 45.0%
ACATTAGCGGAACGTGTTCT+TGG + chr7.2:44379895-44379914 MS.gene45979:CDS 45.0%
AGATTGTTGAGAAACCGTCG+AGG + chr7.2:44379920-44379939 MS.gene45979:CDS 45.0%
CACCGACGAATCTGTTGTTA+GGG - chr7.2:44379747-44379766 None:intergenic 45.0%
CATTAGCGGAACGTGTTCTT+GGG + chr7.2:44379896-44379915 MS.gene45979:CDS 45.0%
GAGGATTACGAGGAGTAGAT+GGG + chr7.2:44379939-44379958 MS.gene45979:CDS 45.0%
GGAGTAGATGGGATAATCCA+TGG + chr7.2:44379950-44379969 MS.gene45979:CDS 45.0%
GGGATAATCCATGGCTTGAT+TGG + chr7.2:44379959-44379978 MS.gene45979:CDS 45.0%
GTTAGAGAGGAAGGTGAAGA+GGG - chr7.2:44379725-44379744 None:intergenic 45.0%
GTTGTTAGGGTTAGAGAGGA+AGG - chr7.2:44379734-44379753 None:intergenic 45.0%
TCGATGAGGGTGATGTTGAA+GGG - chr7.2:44379433-44379452 None:intergenic 45.0%
TGAGATGGAAGATAAGGCAG+CGG - chr7.2:44379678-44379697 None:intergenic 45.0%
TTTACGAAACCTTGCTGCTG+AGG + chr7.2:44379834-44379853 MS.gene45979:CDS 45.0%
!!! TGTGTCGTTTTGGTCAACGA+GGG - chr7.2:44379368-44379387 None:intergenic 45.0%
ACCTGATCCCAATCAAGCCA+TGG - chr7.2:44379970-44379989 None:intergenic 50.0%
AGAAACCGTCGAGGATTACG+AGG + chr7.2:44379929-44379948 MS.gene45979:CDS 50.0%
AGGAAGGTGAAGAGGGAAGT+GGG - chr7.2:44379718-44379737 None:intergenic 50.0%
CGAGGATTACGAGGAGTAGA+TGG + chr7.2:44379938-44379957 MS.gene45979:CDS 50.0%
CGATGAGGGTGATGTTGAAG+GGG - chr7.2:44379432-44379451 None:intergenic 50.0%
CTACTCCTCGTAATCCTCGA+CGG - chr7.2:44379937-44379956 None:intergenic 50.0%
GAAGATAAGGCAGCGGTTGT+TGG - chr7.2:44379671-44379690 None:intergenic 50.0%
GATGAGGGTGATGTTGAAGG+GGG - chr7.2:44379431-44379450 None:intergenic 50.0%
GGTTAGAGAGGAAGGTGAAG+AGG - chr7.2:44379726-44379745 None:intergenic 50.0%
GTCGATGAGGGTGATGTTGA+AGG - chr7.2:44379434-44379453 None:intergenic 50.0%
GTTGGTGCAGAGTTGAAGAG+TGG - chr7.2:44379653-44379672 None:intergenic 50.0%
TCCATGGCTTGATTGGGATC+AGG + chr7.2:44379966-44379985 MS.gene45979:CDS 50.0%
! TTGGGGATTGGCATCGAGAT+GGG - chr7.2:44379391-44379410 None:intergenic 50.0%
!! ATGTTGAAGGGGGTTGGTGT+GGG - chr7.2:44379421-44379440 None:intergenic 50.0%
!! GGTGATGGAGTAGGTGTTGT+GGG - chr7.2:44379476-44379495 None:intergenic 50.0%
!! TGGTGATGGAGTAGGTGTTG+TGG - chr7.2:44379477-44379496 None:intergenic 50.0%
!!! GTGTGTCGTTTTGGTCAACG+AGG - chr7.2:44379369-44379388 None:intergenic 50.0%
!!! TCGAGATGGGTGTGTCGTTT+TGG - chr7.2:44379378-44379397 None:intergenic 50.0%
AAGAGGGAAGTGGGGATGGA+GGG - chr7.2:44379709-44379728 None:intergenic 55.0%
AGAGTTGAAGAGTGGCGGCT+GGG - chr7.2:44379645-44379664 None:intergenic 55.0%
AGGGTGATGTTGAAGGGGGT+TGG - chr7.2:44379427-44379446 None:intergenic 55.0%
ATGTCGAGGCCGATGATTGC+GGG - chr7.2:44379586-44379605 None:intergenic 55.0%
GAGGAAGGTGAAGAGGGAAG+TGG - chr7.2:44379719-44379738 None:intergenic 55.0%
GAGGAGGGTTTGGATGGTGA+AGG - chr7.2:44379509-44379528 None:intergenic 55.0%
GAGGGTTTGGATGGTGAAGG+TGG - chr7.2:44379506-44379525 None:intergenic 55.0%
GATGTCGAGGCCGATGATTG+CGG - chr7.2:44379587-44379606 None:intergenic 55.0%
GGAAGGTGAAGAGGGAAGTG+GGG - chr7.2:44379717-44379736 None:intergenic 55.0%
GGTGCAGAGTTGAAGAGTGG+CGG - chr7.2:44379650-44379669 None:intergenic 55.0%
TAGGACGCCATTCGATGTCG+AGG - chr7.2:44379600-44379619 None:intergenic 55.0%
TCATCGGCCTCGACATCGAA+TGG + chr7.2:44379590-44379609 MS.gene45979:CDS 55.0%
TGGAGGGAGAGTGGATGAGA+TGG - chr7.2:44379693-44379712 None:intergenic 55.0%
! AGTAGGTGTTGTGGGTGTCG+TGG - chr7.2:44379468-44379487 None:intergenic 55.0%
! GATGGTGAAGGTGGTGTCGA+TGG - chr7.2:44379497-44379516 None:intergenic 55.0%
! GTAGGTGTTGTGGGTGTCGT+GGG - chr7.2:44379467-44379486 None:intergenic 55.0%
! GTTGGGGATTGGCATCGAGA+TGG - chr7.2:44379392-44379411 None:intergenic 55.0%
! GTTGGTGTGGGGTTTGGGTT+GGG - chr7.2:44379409-44379428 None:intergenic 55.0%
! TAGGTGTTGTGGGTGTCGTG+GGG - chr7.2:44379466-44379485 None:intergenic 55.0%
!! GAAGGTGGTGTCGATGGTGA+TGG - chr7.2:44379491-44379510 None:intergenic 55.0%
!! GATGTTGAAGGGGGTTGGTG+TGG - chr7.2:44379422-44379441 None:intergenic 55.0%
!! GGTGTCGATGGTGATGGAGT+AGG - chr7.2:44379485-44379504 None:intergenic 55.0%
!! TGTTGAAGGGGGTTGGTGTG+GGG - chr7.2:44379420-44379439 None:intergenic 55.0%
!! TTGGTGTGGGGTTTGGGTTG+GGG - chr7.2:44379408-44379427 None:intergenic 55.0%
AAGTGGGGATGGAGGGAGAG+TGG - chr7.2:44379702-44379721 None:intergenic 60.0%
AGAAGGGGACCAGGTGAGGA+GGG - chr7.2:44379524-44379543 None:intergenic 60.0%
CAGAGTTGAAGAGTGGCGGC+TGG - chr7.2:44379646-44379665 None:intergenic 60.0%
CCAGGTGAGGAGGGTTTGGA+TGG - chr7.2:44379515-44379534 None:intergenic 60.0%
CCATCCAAACCCTCCTCACC+TGG + chr7.2:44379512-44379531 MS.gene45979:CDS 60.0%
CCTCAAGCACCTCAGCAGCA+AGG - chr7.2:44379846-44379865 None:intergenic 60.0%
GAAGAGGGAAGTGGGGATGG+AGG - chr7.2:44379710-44379729 None:intergenic 60.0%
GATTGCGGGGGAGAGGGATT+GGG - chr7.2:44379572-44379591 None:intergenic 60.0%
GGATTGGGTTTCGAGGAGCC+AGG - chr7.2:44379557-44379576 None:intergenic 60.0%
GGGAGAGGGATTGGGTTTCG+AGG - chr7.2:44379564-44379583 None:intergenic 60.0%
GGGGAGGGAGTTGTCGATGA+GGG - chr7.2:44379446-44379465 None:intergenic 60.0%
GGTGAAGAGGGAAGTGGGGA+TGG - chr7.2:44379713-44379732 None:intergenic 60.0%
TCCCTCTCCCCCGCAATCAT+CGG + chr7.2:44379574-44379593 MS.gene45979:CDS 60.0%
TGATTGCGGGGGAGAGGGAT+TGG - chr7.2:44379573-44379592 None:intergenic 60.0%
TGGCGTCCTAACTCCCAACG+CGG + chr7.2:44379610-44379629 MS.gene45979:CDS 60.0%
TGTCGAGGCCGATGATTGCG+GGG - chr7.2:44379585-44379604 None:intergenic 60.0%
TTGAAGAGTGGCGGCTGGGT+TGG - chr7.2:44379641-44379660 None:intergenic 60.0%
! AGGTGTTGTGGGTGTCGTGG+GGG - chr7.2:44379465-44379484 None:intergenic 60.0%
! CCTTGCTGCTGAGGTGCTTG+AGG + chr7.2:44379843-44379862 MS.gene45979:CDS 60.0%
! GATTGGCCGCGTTGGGAGTT+AGG - chr7.2:44379619-44379638 None:intergenic 60.0%
! GGTTGGTGTGGGGTTTGGGT+TGG - chr7.2:44379410-44379429 None:intergenic 60.0%
!! AAGGGGGTTGGTGTGGGGTT+TGG - chr7.2:44379415-44379434 None:intergenic 60.0%
!! AGCCAGGTGTCGACGTGAGA+AGG - chr7.2:44379541-44379560 None:intergenic 60.0%
!! AGGGGGTTGGTGTGGGGTTT+GGG - chr7.2:44379414-44379433 None:intergenic 60.0%
!! CCAGGTGTCGACGTGAGAAG+GGG - chr7.2:44379539-44379558 None:intergenic 60.0%
!! GCCAGGTGTCGACGTGAGAA+GGG - chr7.2:44379540-44379559 None:intergenic 60.0%
!! GTGGGGTTTGGGTTGGGGAT+TGG - chr7.2:44379403-44379422 None:intergenic 60.0%
!! TGGGTTGGATTGGCCGCGTT+GGG - chr7.2:44379626-44379645 None:intergenic 60.0%
CCCCTTCTCACGTCGACACC+TGG + chr7.2:44379536-44379555 MS.gene45979:CDS 65.0%
CGTGAGAAGGGGACCAGGTG+AGG - chr7.2:44379528-44379547 None:intergenic 65.0%
GAGAAGGGGACCAGGTGAGG+AGG - chr7.2:44379525-44379544 None:intergenic 65.0%
GCCGATGATTGCGGGGGAGA+GGG - chr7.2:44379578-44379597 None:intergenic 65.0%
GGGACCAGGTGAGGAGGGTT+TGG - chr7.2:44379519-44379538 None:intergenic 65.0%
GGGGGAGGGAGTTGTCGATG+AGG - chr7.2:44379447-44379466 None:intergenic 65.0%
GTCGACGTGAGAAGGGGACC+AGG - chr7.2:44379533-44379552 None:intergenic 65.0%
GTCGAGGCCGATGATTGCGG+GGG - chr7.2:44379584-44379603 None:intergenic 65.0%
! GAGTGGCGGCTGGGTTGGAT+TGG - chr7.2:44379636-44379655 None:intergenic 65.0%
! GTTGTGGGTGTCGTGGGGGA+GGG - chr7.2:44379461-44379480 None:intergenic 65.0%
! TGTTGTGGGTGTCGTGGGGG+AGG - chr7.2:44379462-44379481 None:intergenic 65.0%
!! CTGGGTTGGATTGGCCGCGT+TGG - chr7.2:44379627-44379646 None:intergenic 65.0%
GGCCGATGATTGCGGGGGAG+AGG - chr7.2:44379579-44379598 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 44379355 44380065 44379355 ID=MS.gene45979
chr7.2 mRNA 44379355 44380065 44379355 ID=MS.gene45979.t1;Parent=MS.gene45979
chr7.2 exon 44379355 44380065 44379355 ID=MS.gene45979.t1.exon1;Parent=MS.gene45979.t1
chr7.2 CDS 44379355 44380065 44379355 ID=cds.MS.gene45979.t1;Parent=MS.gene45979.t1
Gene Sequence

>MS.gene45979

ATGCCGATTACCCTCGTTGACCAAAACGACACACCCATCTCGATGCCAATCCCCAACCCAAACCCCACACCAACCCCCTTCAACATCACCCTCATCGACAACTCCCTCCCCCACGACACCCACAACACCTACTCCATCACCATCGACACCACCTTCACCATCCAAACCCTCCTCACCTGGTCCCCTTCTCACGTCGACACCTGGCTCCTCGAAACCCAATCCCTCTCCCCCGCAATCATCGGCCTCGACATCGAATGGCGTCCTAACTCCCAACGCGGCCAATCCAACCCAGCCGCCACTCTTCAACTCTGCACCAACAACCGCTGCCTTATCTTCCATCTCATCCACTCTCCCTCCATCCCCACTTCCCTCTTCACCTTCCTCTCTAACCCTAACAACAGATTCGTCGGTGTCGGAATTGAATCCGACATCGAGAAGCTTATAGAAGATTACAACCTCACCGTTGCTAATTATGTTGATTTACGAAACCTTGCTGCTGAGGTGCTTGAGGATCGTGATTTGTTGAGAAGTGGGATTAAGACATTAGCGGAACGTGTTCTTGGGAAGATTGTTGAGAAACCGTCGAGGATTACGAGGAGTAGATGGGATAATCCATGGCTTGATTGGGATCAGGTTAAGTATGCTACTGTTGATGCTTTTCTTTCGTTTGAGATTGCTCGTCGTCTTTATTCTCATCAGGTTATTGAATGA
Protein sequence

>MS.gene45979.t1

MPITLVDQNDTPISMPIPNPNPTPTPFNITLIDNSLPHDTHNTYSITIDTTFTIQTLLTWSPSHVDTWLLETQSLSPAIIGLDIEWRPNSQRGQSNPAATLQLCTNNRCLIFHLIHSPSIPTSLFTFLSNPNNRFVGVGIESDIEKLIEDYNLTVANYVDLRNLAAEVLEDRDLLRSGIKTLAERVLGKIVEKPSRITRSRWDNPWLDWDQVKYATVDAFLSFEIARRLYSHQVIE