Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46078.t1 | XP_013449008.1 | 95.8 | 448 | 16 | 1 | 1 | 445 | 1 | 448 | 3.10E-223 | 784.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46078.t1 | B9DFK5 | 64.7 | 447 | 141 | 5 | 1 | 445 | 1 | 432 | 1.0e-134 | 481.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46078.t1 | A0A072UB17 | 95.8 | 448 | 16 | 1 | 1 | 445 | 1 | 448 | 2.2e-223 | 784.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055174 | MS.gene46078 | 0.913666 | 4.72E-84 | -1.69E-46 |
| MS.gene060165 | MS.gene46078 | 0.806031 | 1.00E-49 | -1.69E-46 |
| MS.gene060619 | MS.gene46078 | 0.805084 | 1.58E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46078.t1 | MTR_7g064130 | 95.982 | 448 | 15 | 1 | 1 | 445 | 1 | 448 | 0.0 | 868 |
| MS.gene46078.t1 | MTR_2g084605 | 74.476 | 286 | 73 | 0 | 160 | 445 | 107 | 392 | 2.98e-162 | 463 |
| MS.gene46078.t1 | MTR_7g064190 | 96.875 | 64 | 2 | 0 | 382 | 445 | 16 | 79 | 3.93e-37 | 130 |
| MS.gene46078.t1 | MTR_0013s0150 | 31.023 | 303 | 184 | 9 | 150 | 445 | 93 | 377 | 1.32e-35 | 135 |
| MS.gene46078.t1 | MTR_4g077000 | 30.841 | 321 | 191 | 9 | 132 | 445 | 92 | 388 | 3.48e-33 | 129 |
| MS.gene46078.t1 | MTR_3g033620 | 30.584 | 291 | 181 | 8 | 161 | 445 | 112 | 387 | 1.17e-29 | 119 |
| MS.gene46078.t1 | MTR_7g074090 | 33.621 | 232 | 128 | 8 | 220 | 445 | 96 | 307 | 2.79e-27 | 111 |
| MS.gene46078.t1 | MTR_7g074090 | 33.621 | 232 | 128 | 8 | 220 | 445 | 96 | 307 | 1.25e-26 | 110 |
| MS.gene46078.t1 | MTR_7g074090 | 33.621 | 232 | 128 | 8 | 220 | 445 | 114 | 325 | 1.52e-26 | 110 |
| MS.gene46078.t1 | MTR_7g074070 | 34.061 | 229 | 131 | 8 | 220 | 445 | 107 | 318 | 4.76e-25 | 105 |
| MS.gene46078.t1 | MTR_3g071970 | 26.882 | 279 | 194 | 5 | 174 | 445 | 441 | 716 | 1.85e-24 | 107 |
| MS.gene46078.t1 | MTR_2g081000 | 30.137 | 219 | 137 | 5 | 222 | 438 | 241 | 445 | 2.34e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46078.t1 | AT2G37860 | 60.706 | 453 | 149 | 6 | 1 | 445 | 1 | 432 | 1.21e-173 | 493 |
| MS.gene46078.t1 | AT2G37860 | 60.706 | 453 | 149 | 6 | 1 | 445 | 1 | 432 | 1.21e-173 | 493 |
| MS.gene46078.t1 | AT5G22790 | 74.662 | 296 | 74 | 1 | 151 | 445 | 138 | 433 | 2.40e-168 | 480 |
| MS.gene46078.t1 | AT2G37860 | 56.522 | 368 | 131 | 6 | 1 | 360 | 1 | 347 | 6.29e-118 | 348 |
| MS.gene46078.t1 | AT2G37860 | 56.522 | 368 | 131 | 6 | 1 | 360 | 1 | 347 | 6.29e-118 | 348 |
| MS.gene46078.t1 | AT5G12470 | 29.373 | 303 | 193 | 7 | 149 | 445 | 96 | 383 | 1.03e-33 | 130 |
| MS.gene46078.t1 | AT3G08640 | 34.008 | 247 | 141 | 8 | 203 | 445 | 94 | 322 | 1.12e-31 | 124 |
| MS.gene46078.t1 | AT3G08630 | 34.061 | 229 | 133 | 6 | 220 | 445 | 106 | 319 | 6.31e-31 | 122 |
| MS.gene46078.t1 | AT3G56140 | 31.667 | 240 | 143 | 6 | 219 | 445 | 258 | 489 | 2.86e-25 | 108 |
| MS.gene46078.t1 | AT3G56140 | 31.667 | 240 | 143 | 6 | 219 | 445 | 477 | 708 | 4.41e-25 | 108 |
| MS.gene46078.t1 | AT3G56140 | 31.667 | 240 | 143 | 6 | 219 | 445 | 477 | 708 | 4.41e-25 | 108 |
| MS.gene46078.t1 | AT2G40400 | 29.371 | 286 | 178 | 8 | 174 | 445 | 424 | 699 | 1.78e-24 | 107 |
| MS.gene46078.t1 | AT2G40400 | 29.371 | 286 | 178 | 8 | 174 | 445 | 424 | 699 | 1.78e-24 | 107 |
| MS.gene46078.t1 | AT5G24690 | 30.415 | 217 | 139 | 3 | 222 | 438 | 240 | 444 | 9.88e-21 | 95.1 |
| MS.gene46078.t1 | AT2G40400 | 29.237 | 236 | 144 | 7 | 174 | 395 | 424 | 650 | 1.90e-17 | 85.5 |
Find 117 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCTTCTTCTTAGATATT+TGG | 0.155876 | 7.2:+41984342 | MS.gene46078:CDS |
| CGGGTTGTTCATCGAATTTC+GGG | 0.170013 | 7.2:+41983768 | MS.gene46078:CDS |
| GGGAAAGGAACAGAAAATTT+TGG | 0.206843 | 7.2:+41984063 | MS.gene46078:CDS |
| TTTGAAGAGTGCTGCTCTTT+GGG | 0.218226 | 7.2:+41986688 | MS.gene46078:CDS |
| TGGAAAACCATCAATATCTA+AGG | 0.254898 | 7.2:+41984929 | MS.gene46078:CDS |
| AAAAGAGAGGCAAAGACTTT+TGG | 0.264746 | 7.2:+41984817 | MS.gene46078:CDS |
| GCGGGTTGTTCATCGAATTT+CGG | 0.269265 | 7.2:+41983767 | MS.gene46078:CDS |
| GGATTTGGATGTGGTATTAT+AGG | 0.277977 | 7.2:+41985390 | MS.gene46078:CDS |
| TCTTAGATATTTGGATTTAG+AGG | 0.309246 | 7.2:+41984351 | MS.gene46078:CDS |
| TTCATGCAGGTGTGTTCCTT+GGG | 0.342400 | 7.2:+41987632 | MS.gene46078:intron |
| TGTCGGGAAAGATGCTGTTT+TGG | 0.348622 | 7.2:+41983808 | MS.gene46078:CDS |
| ATTCATGCAGGTGTGTTCCT+TGG | 0.367749 | 7.2:+41987631 | MS.gene46078:intron |
| TTGGCACCTTATGCTCGAAT+TGG | 0.371610 | 7.2:+41984909 | MS.gene46078:CDS |
| ATGTATGCAGGTGTTGGATT+TGG | 0.374444 | 7.2:+41985375 | MS.gene46078:CDS |
| CACTTGTTCACACAAATTGA+TGG | 0.376439 | 7.2:-41983908 | None:intergenic |
| TGTAAGTACGATAGAATTAT+CGG | 0.396315 | 7.2:+41984018 | MS.gene46078:CDS |
| AGGAACCCCTTAGATATTGA+TGG | 0.398264 | 7.2:-41984936 | None:intergenic |
| GGAGATGGTGGCGGTGGCGG+TGG | 0.402455 | 7.2:+41984181 | MS.gene46078:CDS |
| TATGTTGCAGATCTTCTTGT+TGG | 0.403747 | 7.2:+41984855 | MS.gene46078:CDS |
| ATCTAAGAAGAAGCAACTTC+GGG | 0.404666 | 7.2:-41984336 | None:intergenic |
| ATCATCATTTCCAACACTCT+TGG | 0.405442 | 7.2:-41984101 | None:intergenic |
| GATAATGGTGTTGTGTTTGA+TGG | 0.408754 | 7.2:+41984121 | MS.gene46078:CDS |
| AGCTTTGGAAGTGGCGGAGC+AGG | 0.413212 | 7.2:+41984160 | MS.gene46078:CDS |
| GCAGGAGATGGTGGCGGTGG+CGG | 0.417695 | 7.2:+41984178 | MS.gene46078:CDS |
| CTTATGCAGCTTTACCTAGC+AGG | 0.418534 | 7.2:+41984976 | MS.gene46078:CDS |
| AGGTGATAGTGTTGTGGGAA+AGG | 0.433431 | 7.2:+41984048 | MS.gene46078:CDS |
| GACGGTTGTTAATGTTGCTT+TGG | 0.439449 | 7.2:+41984878 | MS.gene46078:CDS |
| GTGGCATGCAGTTTGTTGAC+TGG | 0.441374 | 7.2:+41987788 | MS.gene46078:CDS |
| TGTTGCTTTGGTTGGAATGT+TGG | 0.454554 | 7.2:+41984890 | MS.gene46078:CDS |
| GTTGTTAATGTTGCTTTGGT+TGG | 0.456847 | 7.2:+41984882 | MS.gene46078:CDS |
| AGTGGTGGTAATGGAAGCTT+TGG | 0.457520 | 7.2:+41984145 | MS.gene46078:CDS |
| ACTGTGAAAGCGAGAGCAAC+TGG | 0.461185 | 7.2:-41987736 | None:intergenic |
| CATGCCACCATAAACATTGT+TGG | 0.468817 | 7.2:-41987773 | None:intergenic |
| AGCATCGCCAATGGCAAAGC+AGG | 0.473131 | 7.2:+41987708 | MS.gene46078:CDS |
| GCAGGTGTTGGATTTGGATG+TGG | 0.479236 | 7.2:+41985381 | MS.gene46078:CDS |
| TATCTAAGAAGAAGCAACTT+CGG | 0.479521 | 7.2:-41984337 | None:intergenic |
| TCAATATCTAAGGGGTTCCT+TGG | 0.479546 | 7.2:+41984939 | MS.gene46078:CDS |
| TGATCATGTTTGCAATGCCT+TGG | 0.481394 | 7.2:-41985413 | None:intergenic |
| TGCAGTTTGTTGACTGGGCT+AGG | 0.482177 | 7.2:+41987794 | MS.gene46078:CDS |
| CATCAATGGACTGGAACGTT+TGG | 0.482709 | 7.2:+41987681 | MS.gene46078:CDS |
| GGTGGAACCTGCTTTGCCAT+TGG | 0.486100 | 7.2:-41987715 | None:intergenic |
| GGTGTTGTGTTTGATGGTAG+TGG | 0.488998 | 7.2:+41984127 | MS.gene46078:CDS |
| ACTTGGAACATACTTCTTCA+AGG | 0.489407 | 7.2:+41985259 | MS.gene46078:CDS |
| CTCTTCAAAAGAGGTGGTAC+AGG | 0.498159 | 7.2:-41986674 | None:intergenic |
| GCAGCCTCCAACATATCAAA+AGG | 0.499434 | 7.2:-41984298 | None:intergenic |
| GGAGCAGGAGATGGTGGCGG+TGG | 0.505614 | 7.2:+41984175 | MS.gene46078:CDS |
| TATGCTTCGCAATCGAATGC+TGG | 0.506531 | 7.2:+41984527 | MS.gene46078:CDS |
| ACGCGATACCAGGTCATCAA+TGG | 0.507241 | 7.2:+41987667 | MS.gene46078:CDS |
| GGTATAATGTATGCAGGTGT+TGG | 0.513052 | 7.2:+41985369 | MS.gene46078:CDS |
| GTTGCTCTCGCTTTCACAGT+TGG | 0.513774 | 7.2:+41987739 | MS.gene46078:CDS |
| TTGAAGAGTGCTGCTCTTTG+GGG | 0.513979 | 7.2:+41986689 | MS.gene46078:CDS |
| GGAAAACCATCAATATCTAA+GGG | 0.515563 | 7.2:+41984930 | MS.gene46078:CDS |
| TGGCATGCAGTTTGTTGACT+GGG | 0.519280 | 7.2:+41987789 | MS.gene46078:CDS |
| ATGTTGCAGATCTTCTTGTT+GGG | 0.519882 | 7.2:+41984856 | MS.gene46078:CDS |
| TTTGATGGTAGTGGTGGTAA+TGG | 0.523492 | 7.2:+41984136 | MS.gene46078:CDS |
| TTGCTCGAGTTGTAAGTGTC+GGG | 0.526472 | 7.2:+41983792 | MS.gene46078:CDS |
| TACGATAGAATTATCGGAAG+GGG | 0.527105 | 7.2:+41984024 | MS.gene46078:CDS |
| ATCTTCAAACACGCGATACC+AGG | 0.527301 | 7.2:+41987657 | MS.gene46078:CDS |
| GATCTCATGGCAAATCCTAA+AGG | 0.535500 | 7.2:-41984498 | None:intergenic |
| TGATGAGGTATTGAGAGAGA+CGG | 0.536208 | 7.2:+41984255 | MS.gene46078:CDS |
| TTCCAGGGTATAATGTATGC+AGG | 0.540927 | 7.2:+41985363 | MS.gene46078:intron |
| CCTCCAACATATCAAAAGGA+AGG | 0.542894 | 7.2:-41984294 | None:intergenic |
| AGTGTTGGAAATGATGATAA+TGG | 0.543927 | 7.2:+41984106 | MS.gene46078:CDS |
| GTTGGAGGCTGCTAAGACTG+TGG | 0.546763 | 7.2:+41984309 | MS.gene46078:CDS |
| AATTCTATCGTACTTACAGC+AGG | 0.548443 | 7.2:-41984013 | None:intergenic |
| GGAAGTGGCGGAGCAGGAGA+TGG | 0.548685 | 7.2:+41984166 | MS.gene46078:CDS |
| TGTGTGAACAAGTGTGGTGG+TGG | 0.552254 | 7.2:+41983917 | MS.gene46078:CDS |
| GGATGTGGTATTATAGGCCA+AGG | 0.552476 | 7.2:+41985396 | MS.gene46078:CDS |
| CATGTGCATGTCGCAGCCGC+CGG | 0.556713 | 7.2:+41983979 | MS.gene46078:CDS |
| AGTGGCGGAGCAGGAGATGG+TGG | 0.556920 | 7.2:+41984169 | MS.gene46078:CDS |
| TGCAGATCTTCTTGTTGGGA+CGG | 0.558342 | 7.2:+41984860 | MS.gene46078:CDS |
| GGCGGAGCAGGAGATGGTGG+CGG | 0.560865 | 7.2:+41984172 | MS.gene46078:CDS |
| GTATTTGAAGCTGAAAGGCC+AGG | 0.561879 | 7.2:+41985212 | MS.gene46078:CDS |
| GTTGCTCGAGTTGTAAGTGT+CGG | 0.562587 | 7.2:+41983791 | MS.gene46078:CDS |
| GTTGACTGGGCTAGGTGGAG+TGG | 0.562706 | 7.2:+41987802 | MS.gene46078:CDS |
| ACAGCAGGCTGTGAATCAGC+CGG | 0.563170 | 7.2:-41983998 | None:intergenic |
| GATGATGACGACAAAGAAGA+GGG | 0.567243 | 7.2:+41984208 | MS.gene46078:CDS |
| ATACCAGGTCATCAATGGAC+TGG | 0.578972 | 7.2:+41987672 | MS.gene46078:CDS |
| CGGCGGCTGCGACATGCACA+TGG | 0.579440 | 7.2:-41983978 | None:intergenic |
| AAGCATAGAACATGATCTCA+TGG | 0.582119 | 7.2:-41984511 | None:intergenic |
| TGCACAGAAAATCTACATCC+TGG | 0.582715 | 7.2:-41985230 | None:intergenic |
| GCAGTGTATTTGAAGCTGAA+AGG | 0.583183 | 7.2:+41985207 | MS.gene46078:intron |
| TCATGCAGGTGTGTTCCTTG+GGG | 0.584698 | 7.2:+41987633 | MS.gene46078:intron |
| GGTAATGGAAGCTTTGGAAG+TGG | 0.586739 | 7.2:+41984151 | MS.gene46078:CDS |
| GAGTCGGATTCCAAGAGTGT+TGG | 0.595342 | 7.2:+41984091 | MS.gene46078:CDS |
| AGAGCAGCACTCTTCAAAAG+AGG | 0.596155 | 7.2:-41986683 | None:intergenic |
| TTTGCCAACAATGTTTATGG+TGG | 0.603143 | 7.2:+41987769 | MS.gene46078:CDS |
| GTTCCAGTCCATTGATGACC+TGG | 0.603834 | 7.2:-41987675 | None:intergenic |
| CTCCAACATATCAAAAGGAA+GGG | 0.605068 | 7.2:-41984293 | None:intergenic |
| GTTGCTGAATATCAAAAGAG+AGG | 0.607008 | 7.2:+41984804 | MS.gene46078:CDS |
| TGATGATGACGACAAAGAAG+AGG | 0.620740 | 7.2:+41984207 | MS.gene46078:CDS |
| AGTACGATAGAATTATCGGA+AGG | 0.623310 | 7.2:+41984022 | MS.gene46078:CDS |
| GCCAATGCTAAAATATGATG+AGG | 0.623927 | 7.2:+41984240 | MS.gene46078:CDS |
| ATGACGAGTAGTAACCTGCT+AGG | 0.624592 | 7.2:-41984990 | None:intergenic |
| TTGGAGGCTGCTAAGACTGT+GGG | 0.625642 | 7.2:+41984310 | MS.gene46078:CDS |
| AAGCTTTCTGCATATTACCA+AGG | 0.634437 | 7.2:-41984956 | None:intergenic |
| GTTGTGTTTGATGGTAGTGG+TGG | 0.634972 | 7.2:+41984130 | MS.gene46078:CDS |
| TTTGGTAGAAGCATCGCCAA+TGG | 0.639236 | 7.2:+41987699 | MS.gene46078:CDS |
| AATGGAAGCTTTGGAAGTGG+CGG | 0.641690 | 7.2:+41984154 | MS.gene46078:CDS |
| GTACGATAGAATTATCGGAA+GGG | 0.641710 | 7.2:+41984023 | MS.gene46078:CDS |
| GCAGGCTGTGAATCAGCCGG+CGG | 0.654169 | 7.2:-41983995 | None:intergenic |
| CAGGAACATAAAGACATCAG+AGG | 0.657150 | 7.2:+41986643 | MS.gene46078:intron |
| GCAGCACTCTTCAAAAGAGG+TGG | 0.662234 | 7.2:-41986680 | None:intergenic |
| GTGAAAGCGAGAGCAACTGG+TGG | 0.667024 | 7.2:-41987733 | None:intergenic |
| TGATGACGACAAAGAAGAGG+GGG | 0.669601 | 7.2:+41984210 | MS.gene46078:CDS |
| TTGAGAGAGACGGAGGCACG+TGG | 0.670085 | 7.2:+41984265 | MS.gene46078:CDS |
| GAAAACCATCAATATCTAAG+GGG | 0.676382 | 7.2:+41984931 | MS.gene46078:CDS |
| ACGATAGAATTATCGGAAGG+GGG | 0.677053 | 7.2:+41984025 | MS.gene46078:CDS |
| TCAATTTGTGTGAACAAGTG+TGG | 0.686833 | 7.2:+41983911 | MS.gene46078:CDS |
| GGGTTGTTCATCGAATTTCG+GGG | 0.689689 | 7.2:+41983769 | MS.gene46078:CDS |
| ATGATGACGACAAAGAAGAG+GGG | 0.692507 | 7.2:+41984209 | MS.gene46078:CDS |
| AGTTTGTTGACTGGGCTAGG+TGG | 0.701181 | 7.2:+41987797 | MS.gene46078:CDS |
| GCGTGTTTGAAGATACCCCA+AGG | 0.708255 | 7.2:-41987648 | None:intergenic |
| TGAGGTATTGAGAGAGACGG+AGG | 0.711529 | 7.2:+41984258 | MS.gene46078:CDS |
| GAGTGCAATGTTGTTGAACG+AGG | 0.722491 | 7.2:+41983877 | MS.gene46078:CDS |
| ACATGATCATGACTGCAAAG+CGG | 0.730268 | 7.2:+41985427 | MS.gene46078:CDS |
| ATTTGTGTGAACAAGTGTGG+TGG | 0.736345 | 7.2:+41983914 | MS.gene46078:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATCAG+CGG | - | chr7.2:41985745-41985764 | None:intergenic | 10.0% |
| !! | TTATACAAACATAAAAATTA+AGG | - | chr7.2:41984613-41984632 | None:intergenic | 10.0% |
| !! | AATAACTGAGTAAAAATAAA+TGG | - | chr7.2:41986786-41986805 | None:intergenic | 15.0% |
| !! | ATATCATGAGTTAAATAAAT+CGG | - | chr7.2:41984753-41984772 | None:intergenic | 15.0% |
| !! | TAAATTGTATAACAATACAA+TGG | + | chr7.2:41986883-41986902 | MS.gene46078:intron | 15.0% |
| !!! | ATTAATCACTCTAAAAAATA+AGG | - | chr7.2:41986602-41986621 | None:intergenic | 15.0% |
| !!! | TATGTTTGTATAATTTTCAA+TGG | + | chr7.2:41984620-41984639 | MS.gene46078:intron | 15.0% |
| !!! | TTTATTTTTACTCAGTTATT+AGG | + | chr7.2:41986786-41986805 | MS.gene46078:intron | 15.0% |
| !! | CTATACAAAAACAATAAACA+AGG | + | chr7.2:41985885-41985904 | MS.gene46078:intron | 20.0% |
| !!! | TTATTTTCTCAAATTATCAC+TGG | + | chr7.2:41987341-41987360 | MS.gene46078:intron | 20.0% |
| ! | AAAGTCATAAATCAACTGTA+AGG | - | chr7.2:41987147-41987166 | None:intergenic | 25.0% |
| ! | AAATATTGACACCAAAAACA+AGG | - | chr7.2:41985029-41985048 | None:intergenic | 25.0% |
| ! | AAGTCATAAATCAACTGTAA+GGG | - | chr7.2:41987146-41987165 | None:intergenic | 25.0% |
| ! | AATTGACACTTATATCAATC+AGG | - | chr7.2:41985842-41985861 | None:intergenic | 25.0% |
| ! | ATTATGACTATCAACAAACA+AGG | - | chr7.2:41986851-41986870 | None:intergenic | 25.0% |
| ! | CTAAAGACAAAAAAGCAATT+AGG | - | chr7.2:41985143-41985162 | None:intergenic | 25.0% |
| ! | TAAACAAGGAATGTTTGAAT+TGG | + | chr7.2:41985899-41985918 | MS.gene46078:intron | 25.0% |
| ! | TCTTAGATATTTGGATTTAG+AGG | + | chr7.2:41984351-41984370 | MS.gene46078:CDS | 25.0% |
| ! | TGACTTCATTATATGAACTA+AGG | + | chr7.2:41986173-41986192 | MS.gene46078:intron | 25.0% |
| ! | TGAGTGCAAGATTATTTATT+TGG | + | chr7.2:41985285-41985304 | MS.gene46078:intron | 25.0% |
| ! | TGTAAGTACGATAGAATTAT+CGG | + | chr7.2:41984018-41984037 | MS.gene46078:CDS | 25.0% |
| ! | TTATGACTATCAACAAACAA+GGG | - | chr7.2:41986850-41986869 | None:intergenic | 25.0% |
| ! | TTATGATATTCTCAATTGCA+GGG | + | chr7.2:41984465-41984484 | MS.gene46078:intron | 25.0% |
| ! | TTTATGATATTCTCAATTGC+AGG | + | chr7.2:41984464-41984483 | MS.gene46078:intron | 25.0% |
| !! | ATAAATGTAATTGAAAGTGC+TGG | - | chr7.2:41987315-41987334 | None:intergenic | 25.0% |
| !! | ATAGAGCTTTATATGAAAAG+TGG | - | chr7.2:41985869-41985888 | None:intergenic | 25.0% |
| !! | TAGAGCTTTATATGAAAAGT+GGG | - | chr7.2:41985868-41985887 | None:intergenic | 25.0% |
| !! | TCTATTCTAAAGATACAACT+TGG | + | chr7.2:41987175-41987194 | MS.gene46078:intron | 25.0% |
| !!! | AAACATGTCAGTTTTTTGTT+TGG | + | chr7.2:41986265-41986284 | MS.gene46078:intron | 25.0% |
| !!! | TATATACTGAGAAGTATTCA+AGG | + | chr7.2:41985801-41985820 | MS.gene46078:intron | 25.0% |
| AATGGACATTTCTATTTCCA+GGG | + | chr7.2:41985348-41985367 | MS.gene46078:intron | 30.0% | |
| ATTATATTAGAAGATCCGCA+TGG | - | chr7.2:41985715-41985734 | None:intergenic | 30.0% | |
| CAATGAGTGTTTCATTTGAA+TGG | + | chr7.2:41985330-41985349 | MS.gene46078:intron | 30.0% | |
| CATATAATGAAGTCACACTT+TGG | - | chr7.2:41986168-41986187 | None:intergenic | 30.0% | |
| CTAACAAGTTATGTGCAATA+TGG | + | chr7.2:41987481-41987500 | MS.gene46078:intron | 30.0% | |
| CTGATTGTCAGATATATGAT+TGG | - | chr7.2:41985545-41985564 | None:intergenic | 30.0% | |
| GAAAACCATCAATATCTAAG+GGG | + | chr7.2:41984931-41984950 | MS.gene46078:CDS | 30.0% | |
| GGAAAACCATCAATATCTAA+GGG | + | chr7.2:41984930-41984949 | MS.gene46078:CDS | 30.0% | |
| GTCAGATATATGATTGGAAA+GGG | - | chr7.2:41985539-41985558 | None:intergenic | 30.0% | |
| GTGTTCAATAAAATCAGTTC+TGG | - | chr7.2:41987005-41987024 | None:intergenic | 30.0% | |
| GTTGCTTCTTCTTAGATATT+TGG | + | chr7.2:41984342-41984361 | MS.gene46078:CDS | 30.0% | |
| TACTCGTCATGACATTAAAA+GGG | + | chr7.2:41985003-41985022 | MS.gene46078:intron | 30.0% | |
| TATCTAAGAAGAAGCAACTT+CGG | - | chr7.2:41984340-41984359 | None:intergenic | 30.0% | |
| TCTAATACTCACTCTCTTAT+TGG | + | chr7.2:41985582-41985601 | MS.gene46078:intron | 30.0% | |
| TGCAAACTATGTAATGACAA+CGG | - | chr7.2:41985469-41985488 | None:intergenic | 30.0% | |
| TGGAAAACCATCAATATCTA+AGG | + | chr7.2:41984929-41984948 | MS.gene46078:CDS | 30.0% | |
| TGTCAGATATATGATTGGAA+AGG | - | chr7.2:41985540-41985559 | None:intergenic | 30.0% | |
| TTACAGAACAGTCAAAGAAT+TGG | - | chr7.2:41984666-41984685 | None:intergenic | 30.0% | |
| TTTACCTATGAATTAAGCTG+AGG | + | chr7.2:41986812-41986831 | MS.gene46078:intron | 30.0% | |
| TTTACCTCAGCTTAATTCAT+AGG | - | chr7.2:41986819-41986838 | None:intergenic | 30.0% | |
| ! | AGTGTTGGAAATGATGATAA+TGG | + | chr7.2:41984106-41984125 | MS.gene46078:CDS | 30.0% |
| ! | CCAGCATTTCTTTTCAAAAT+TGG | + | chr7.2:41984555-41984574 | MS.gene46078:CDS | 30.0% |
| ! | GAAAATTTTGGATAGTGAGT+CGG | + | chr7.2:41984075-41984094 | MS.gene46078:CDS | 30.0% |
| ! | GCTTTTTGCTTGACATAAAT+AGG | + | chr7.2:41986195-41986214 | MS.gene46078:intron | 30.0% |
| ! | TCTAAAATGACATGAAAGTC+AGG | + | chr7.2:41985107-41985126 | MS.gene46078:intron | 30.0% |
| !! | CCAATTTTGAAAAGAAATGC+TGG | - | chr7.2:41984558-41984577 | None:intergenic | 30.0% |
| !! | GTTTTAGTAGTTTGAGTTTC+AGG | + | chr7.2:41983855-41983874 | MS.gene46078:CDS | 30.0% |
| !!! | AATAAATGGTTGCTGTTTTC+TGG | - | chr7.2:41986772-41986791 | None:intergenic | 30.0% |
| !!! | ACCTCATCATATTTTAGCAT+TGG | - | chr7.2:41984244-41984263 | None:intergenic | 30.0% |
| !!! | CAGTTTTTTGTTTGGAAACT+CGG | + | chr7.2:41986273-41986292 | MS.gene46078:intron | 30.0% |
| !!! | GACTTTCATGTCATTTTAGA+TGG | - | chr7.2:41985107-41985126 | None:intergenic | 30.0% |
| AACAACAACGTTAAACTCCT+AGG | - | chr7.2:41984446-41984465 | None:intergenic | 35.0% | |
| AACAAGATGGATCATTACCT+AGG | + | chr7.2:41984426-41984445 | MS.gene46078:intron | 35.0% | |
| AAGCATAGAACATGATCTCA+TGG | - | chr7.2:41984514-41984533 | None:intergenic | 35.0% | |
| AAGCTTTCTGCATATTACCA+AGG | - | chr7.2:41984959-41984978 | None:intergenic | 35.0% | |
| AATTCTATCGTACTTACAGC+AGG | - | chr7.2:41984016-41984035 | None:intergenic | 35.0% | |
| ACTGTGTAGTTCAATTAGAG+TGG | + | chr7.2:41987091-41987110 | MS.gene46078:intron | 35.0% | |
| ACTTGGAACATACTTCTTCA+AGG | + | chr7.2:41985259-41985278 | MS.gene46078:CDS | 35.0% | |
| AGATCAAGCATGACAAATCT+TGG | - | chr7.2:41987511-41987530 | None:intergenic | 35.0% | |
| AGTACGATAGAATTATCGGA+AGG | + | chr7.2:41984022-41984041 | MS.gene46078:CDS | 35.0% | |
| AGTATCATTCAGTACGAACA+TGG | - | chr7.2:41986556-41986575 | None:intergenic | 35.0% | |
| ATCATCATTTCCAACACTCT+TGG | - | chr7.2:41984104-41984123 | None:intergenic | 35.0% | |
| ATCTAAGAAGAAGCAACTTC+GGG | - | chr7.2:41984339-41984358 | None:intergenic | 35.0% | |
| ATCTGACAATCAGAAATGCT+AGG | + | chr7.2:41985552-41985571 | MS.gene46078:intron | 35.0% | |
| ATGTTGCAGATCTTCTTGTT+GGG | + | chr7.2:41984856-41984875 | MS.gene46078:CDS | 35.0% | |
| CACTTGTTCACACAAATTGA+TGG | - | chr7.2:41983911-41983930 | None:intergenic | 35.0% | |
| CGGATTACTTAAGATAGAGA+AGG | - | chr7.2:41984733-41984752 | None:intergenic | 35.0% | |
| CTACTCGTCATGACATTAAA+AGG | + | chr7.2:41985002-41985021 | MS.gene46078:intron | 35.0% | |
| CTCCAACATATCAAAAGGAA+GGG | - | chr7.2:41984296-41984315 | None:intergenic | 35.0% | |
| GAATGGACATTTCTATTTCC+AGG | + | chr7.2:41985347-41985366 | MS.gene46078:intron | 35.0% | |
| GACTATTTGAGCTTATCTAC+CGG | + | chr7.2:41985921-41985940 | MS.gene46078:intron | 35.0% | |
| GCCAATGCTAAAATATGATG+AGG | + | chr7.2:41984240-41984259 | MS.gene46078:CDS | 35.0% | |
| GCTTGACATAAATAGGTTCT+AGG | + | chr7.2:41986202-41986221 | MS.gene46078:intron | 35.0% | |
| GGATTTGGATGTGGTATTAT+AGG | + | chr7.2:41985390-41985409 | MS.gene46078:CDS | 35.0% | |
| GTACGATAGAATTATCGGAA+GGG | + | chr7.2:41984023-41984042 | MS.gene46078:CDS | 35.0% | |
| GTGACAACAATTCTTGTGTT+GGG | - | chr7.2:41986397-41986416 | None:intergenic | 35.0% | |
| GTTGCTGAATATCAAAAGAG+AGG | + | chr7.2:41984804-41984823 | MS.gene46078:CDS | 35.0% | |
| TACGATAGAATTATCGGAAG+GGG | + | chr7.2:41984024-41984043 | MS.gene46078:CDS | 35.0% | |
| TATGTTGCAGATCTTCTTGT+TGG | + | chr7.2:41984855-41984874 | MS.gene46078:CDS | 35.0% | |
| TCAATGTGTGTTGAACAGTT+TGG | + | chr7.2:41985610-41985629 | MS.gene46078:intron | 35.0% | |
| TCAATTTGTGTGAACAAGTG+TGG | + | chr7.2:41983911-41983930 | MS.gene46078:CDS | 35.0% | |
| TTTGCCAACAATGTTTATGG+TGG | + | chr7.2:41987769-41987788 | MS.gene46078:CDS | 35.0% | |
| ! | AAAAGAGAGGCAAAGACTTT+TGG | + | chr7.2:41984817-41984836 | MS.gene46078:CDS | 35.0% |
| ! | ACTTTGCTATGGCTTCAATT+GGG | - | chr7.2:41986360-41986379 | None:intergenic | 35.0% |
| ! | CATATTTTCGTAAGCTCTCT+TGG | + | chr7.2:41986021-41986040 | MS.gene46078:intron | 35.0% |
| ! | CGTTTTGCCAACAATGTTTA+TGG | + | chr7.2:41987766-41987785 | MS.gene46078:CDS | 35.0% |
| ! | CTTTTGATATTCAGCAACAG+TGG | - | chr7.2:41984802-41984821 | None:intergenic | 35.0% |
| ! | GCATTTTCCAATAGCATACA+TGG | - | chr7.2:41984392-41984411 | None:intergenic | 35.0% |
| ! | GGGAAAGGAACAGAAAATTT+TGG | + | chr7.2:41984063-41984082 | MS.gene46078:CDS | 35.0% |
| ! | TACCCTTCCTTTTGATATGT+TGG | + | chr7.2:41984291-41984310 | MS.gene46078:CDS | 35.0% |
| ! | TCTAGGAGCAGATTTTAAAC+AGG | + | chr7.2:41986219-41986238 | MS.gene46078:intron | 35.0% |
| !! | GATAATGGTGTTGTGTTTGA+TGG | + | chr7.2:41984121-41984140 | MS.gene46078:CDS | 35.0% |
| !! | GTTGTTAATGTTGCTTTGGT+TGG | + | chr7.2:41984882-41984901 | MS.gene46078:CDS | 35.0% |
| !! | TCTTTTCAAAATTGGCTCAG+AGG | + | chr7.2:41984563-41984582 | MS.gene46078:CDS | 35.0% |
| !!! | CATTAAAAGGGCCTTGTTTT+TGG | + | chr7.2:41985015-41985034 | MS.gene46078:intron | 35.0% |
| AACACACCTGCATGAATGTT+CGG | - | chr7.2:41987628-41987647 | None:intergenic | 40.0% | |
| AAGCACTTGTGAGACTCTTT+GGG | + | chr7.2:41985947-41985966 | MS.gene46078:intron | 40.0% | |
| ACAAAGAAGAGGGGGAATTT+GGG | + | chr7.2:41984218-41984237 | MS.gene46078:CDS | 40.0% | |
| ACAAGAATTGTTGTCACCTG+GGG | + | chr7.2:41986400-41986419 | MS.gene46078:intron | 40.0% | |
| ACACAAGAATTGTTGTCACC+TGG | + | chr7.2:41986398-41986417 | MS.gene46078:intron | 40.0% | |
| ACATGATCATGACTGCAAAG+CGG | + | chr7.2:41985427-41985446 | MS.gene46078:CDS | 40.0% | |
| ACGATAGAATTATCGGAAGG+GGG | + | chr7.2:41984025-41984044 | MS.gene46078:CDS | 40.0% | |
| AGGAACCCCTTAGATATTGA+TGG | - | chr7.2:41984939-41984958 | None:intergenic | 40.0% | |
| AGTGATTAGAGACGGAGAAA+AGG | - | chr7.2:41987236-41987255 | None:intergenic | 40.0% | |
| AGTTCAATTAGAGTGGTGGT+TGG | + | chr7.2:41987098-41987117 | MS.gene46078:intron | 40.0% | |
| ATTTGTGTGAACAAGTGTGG+TGG | + | chr7.2:41983914-41983933 | MS.gene46078:CDS | 40.0% | |
| CAACTTGGTATGTTGTTCTC+TGG | + | chr7.2:41987190-41987209 | MS.gene46078:intron | 40.0% | |
| CACAAGAATTGTTGTCACCT+GGG | + | chr7.2:41986399-41986418 | MS.gene46078:intron | 40.0% | |
| CAGGAACATAAAGACATCAG+AGG | + | chr7.2:41986643-41986662 | MS.gene46078:intron | 40.0% | |
| CATCAGATTGAATGTGTGTC+CGG | + | chr7.2:41987280-41987299 | MS.gene46078:intron | 40.0% | |
| CATGCCACCATAAACATTGT+TGG | - | chr7.2:41987776-41987795 | None:intergenic | 40.0% | |
| CCAATAGGATTAAACCCATG+TGG | - | chr7.2:41985646-41985665 | None:intergenic | 40.0% | |
| CCACATGGGTTTAATCCTAT+TGG | + | chr7.2:41985643-41985662 | MS.gene46078:intron | 40.0% | |
| CCTCCAACATATCAAAAGGA+AGG | - | chr7.2:41984297-41984316 | None:intergenic | 40.0% | |
| CTCTGATGTCTTTATGTTCC+TGG | - | chr7.2:41986645-41986664 | None:intergenic | 40.0% | |
| CTGATGTGCTAGTACTACAT+AGG | - | chr7.2:41987266-41987285 | None:intergenic | 40.0% | |
| GAGATGTCCATGTATGCTAT+TGG | + | chr7.2:41984382-41984401 | MS.gene46078:intron | 40.0% | |
| GATCTCATGGCAAATCCTAA+AGG | - | chr7.2:41984501-41984520 | None:intergenic | 40.0% | |
| GGTATAATGTATGCAGGTGT+TGG | + | chr7.2:41985369-41985388 | MS.gene46078:CDS | 40.0% | |
| GGTGACAACAATTCTTGTGT+TGG | - | chr7.2:41986398-41986417 | None:intergenic | 40.0% | |
| GTGTAGTTCAATTAGAGTGG+TGG | + | chr7.2:41987094-41987113 | MS.gene46078:intron | 40.0% | |
| GTTTAATCCTATTGGAGAGC+AGG | + | chr7.2:41985651-41985670 | MS.gene46078:intron | 40.0% | |
| TAAGCACTTGTGAGACTCTT+TGG | + | chr7.2:41985946-41985965 | MS.gene46078:intron | 40.0% | |
| TCAATATCTAAGGGGTTCCT+TGG | + | chr7.2:41984939-41984958 | MS.gene46078:CDS | 40.0% | |
| TGATCATGTTTGCAATGCCT+TGG | - | chr7.2:41985416-41985435 | None:intergenic | 40.0% | |
| TGCACAGAAAATCTACATCC+TGG | - | chr7.2:41985233-41985252 | None:intergenic | 40.0% | |
| TGCTACTGTGCAAAACAAGA+TGG | + | chr7.2:41984413-41984432 | MS.gene46078:intron | 40.0% | |
| TTCCAGGGTATAATGTATGC+AGG | + | chr7.2:41985363-41985382 | MS.gene46078:intron | 40.0% | |
| TTGGAAATGAGTCTCCACAT+GGG | + | chr7.2:41985629-41985648 | MS.gene46078:intron | 40.0% | |
| TTGGTCAACGCAATTATGAG+AGG | + | chr7.2:41985304-41985323 | MS.gene46078:intron | 40.0% | |
| TTGTTTGGAAACTCGGTATC+TGG | + | chr7.2:41986280-41986299 | MS.gene46078:intron | 40.0% | |
| TTTAACACCTGCTCTCCAAT+AGG | - | chr7.2:41985661-41985680 | None:intergenic | 40.0% | |
| TTTGGAAATGAGTCTCCACA+TGG | + | chr7.2:41985628-41985647 | MS.gene46078:intron | 40.0% | |
| ! | ATGATGACGACAAAGAAGAG+GGG | + | chr7.2:41984209-41984228 | MS.gene46078:CDS | 40.0% |
| ! | CCTTCCTTTTGATATGTTGG+AGG | + | chr7.2:41984294-41984313 | MS.gene46078:CDS | 40.0% |
| ! | CGAAATTTTTAACAACCCCC+CGG | - | chr7.2:41986500-41986519 | None:intergenic | 40.0% |
| ! | CTCAATTGCAGGGATCTTTT+TGG | + | chr7.2:41984475-41984494 | MS.gene46078:intron | 40.0% |
| ! | GAAATTTTTAACAACCCCCC+GGG | - | chr7.2:41986499-41986518 | None:intergenic | 40.0% |
| ! | GACGGTTGTTAATGTTGCTT+TGG | + | chr7.2:41984878-41984897 | MS.gene46078:CDS | 40.0% |
| ! | GACTTTGCTATGGCTTCAAT+TGG | - | chr7.2:41986361-41986380 | None:intergenic | 40.0% |
| ! | GATGATGACGACAAAGAAGA+GGG | + | chr7.2:41984208-41984227 | MS.gene46078:CDS | 40.0% |
| ! | GCAGTGTATTTGAAGCTGAA+AGG | + | chr7.2:41985207-41985226 | MS.gene46078:intron | 40.0% |
| ! | GGTTTTCCAATTCGAGCATA+AGG | - | chr7.2:41984918-41984937 | None:intergenic | 40.0% |
| ! | TGATGATGACGACAAAGAAG+AGG | + | chr7.2:41984207-41984226 | MS.gene46078:CDS | 40.0% |
| !! | AGTCACACTTTGGCTCTATT+TGG | - | chr7.2:41986158-41986177 | None:intergenic | 40.0% |
| !! | ATGTATGCAGGTGTTGGATT+TGG | + | chr7.2:41985375-41985394 | MS.gene46078:CDS | 40.0% |
| !! | GTAATTGAAAGTGCTGGTGT+TGG | - | chr7.2:41987309-41987328 | None:intergenic | 40.0% |
| !! | TGATGAGGTATTGAGAGAGA+CGG | + | chr7.2:41984255-41984274 | MS.gene46078:CDS | 40.0% |
| !! | TGTTGCTTTGGTTGGAATGT+TGG | + | chr7.2:41984890-41984909 | MS.gene46078:CDS | 40.0% |
| !! | TTTGAAGAGTGCTGCTCTTT+GGG | + | chr7.2:41986688-41986707 | MS.gene46078:CDS | 40.0% |
| !! | TTTGATGGTAGTGGTGGTAA+TGG | + | chr7.2:41984136-41984155 | MS.gene46078:CDS | 40.0% |
| !!! | TTTTGAAGAGTGCTGCTCTT+TGG | + | chr7.2:41986687-41986706 | MS.gene46078:CDS | 40.0% |
| ACACACCTGCATGAATGTTC+GGG | - | chr7.2:41987627-41987646 | None:intergenic | 45.0% | |
| ACTGACACATACACAGACAC+TGG | - | chr7.2:41987389-41987408 | None:intergenic | 45.0% | |
| AGAGCAGCACTCTTCAAAAG+AGG | - | chr7.2:41986686-41986705 | None:intergenic | 45.0% | |
| AGCCATAGCAAAGTCCTGTA+TGG | + | chr7.2:41986366-41986385 | MS.gene46078:intron | 45.0% | |
| AGTCTCACAAGTGCTTATGC+CGG | - | chr7.2:41985943-41985962 | None:intergenic | 45.0% | |
| ATACCAGGTCATCAATGGAC+TGG | + | chr7.2:41987672-41987691 | MS.gene46078:CDS | 45.0% | |
| ATAGAATTATCGGAAGGGGG+AGG | + | chr7.2:41984028-41984047 | MS.gene46078:CDS | 45.0% | |
| ATCATGACTGCAAAGCGGTA+TGG | + | chr7.2:41985432-41985451 | MS.gene46078:intron | 45.0% | |
| ATCTTCAAACACGCGATACC+AGG | + | chr7.2:41987657-41987676 | MS.gene46078:CDS | 45.0% | |
| ATGACGAGTAGTAACCTGCT+AGG | - | chr7.2:41984993-41985012 | None:intergenic | 45.0% | |
| ATGGCCAATTGTCAGATGAG+GGG | - | chr7.2:41985696-41985715 | None:intergenic | 45.0% | |
| ATTCATGCAGGTGTGTTCCT+TGG | + | chr7.2:41987631-41987650 | MS.gene46078:intron | 45.0% | |
| CAAGAATTGTTGTCACCTGG+GGG | + | chr7.2:41986401-41986420 | MS.gene46078:intron | 45.0% | |
| CACCTGCATACATTATACCC+TGG | - | chr7.2:41985368-41985387 | None:intergenic | 45.0% | |
| CATGGCCAATTGTCAGATGA+GGG | - | chr7.2:41985697-41985716 | None:intergenic | 45.0% | |
| CGGGTTGTTCATCGAATTTC+GGG | + | chr7.2:41983768-41983787 | MS.gene46078:CDS | 45.0% | |
| CTCTTCAAAAGAGGTGGTAC+AGG | - | chr7.2:41986677-41986696 | None:intergenic | 45.0% | |
| CTGGACACAACACTAACACA+TGG | - | chr7.2:41987370-41987389 | None:intergenic | 45.0% | |
| CTTATGCAGCTTTACCTAGC+AGG | + | chr7.2:41984976-41984995 | MS.gene46078:CDS | 45.0% | |
| GACAAAGAAGAGGGGGAATT+TGG | + | chr7.2:41984217-41984236 | MS.gene46078:CDS | 45.0% | |
| GAGTGCAATGTTGTTGAACG+AGG | + | chr7.2:41983877-41983896 | MS.gene46078:CDS | 45.0% | |
| GCAGCCTCCAACATATCAAA+AGG | - | chr7.2:41984301-41984320 | None:intergenic | 45.0% | |
| GGATGTGGTATTATAGGCCA+AGG | + | chr7.2:41985396-41985415 | MS.gene46078:CDS | 45.0% | |
| GGGTTGTTCATCGAATTTCG+GGG | + | chr7.2:41983769-41983788 | MS.gene46078:CDS | 45.0% | |
| GTCCATACAGGACTTTGCTA+TGG | - | chr7.2:41986371-41986390 | None:intergenic | 45.0% | |
| GTCGTCAGAGTGATTAGAGA+CGG | - | chr7.2:41987244-41987263 | None:intergenic | 45.0% | |
| GTGCTTCGTAGCACAAAACA+AGG | + | chr7.2:41987407-41987426 | MS.gene46078:intron | 45.0% | |
| TAGAGACGGAGAAAAGGAAG+AGG | - | chr7.2:41987230-41987249 | None:intergenic | 45.0% | |
| TATGCTTCGCAATCGAATGC+TGG | + | chr7.2:41984527-41984546 | MS.gene46078:CDS | 45.0% | |
| TCATCTGACAATTGGCCATG+CGG | + | chr7.2:41985697-41985716 | MS.gene46078:intron | 45.0% | |
| TGCAGATCTTCTTGTTGGGA+CGG | + | chr7.2:41984860-41984879 | MS.gene46078:CDS | 45.0% | |
| TGTTCCTGGTAGCAAACAAG+AGG | - | chr7.2:41986631-41986650 | None:intergenic | 45.0% | |
| TGTTTCCCGAACATTCATGC+AGG | + | chr7.2:41987619-41987638 | MS.gene46078:intron | 45.0% | |
| TTCATGCAGGTGTGTTCCTT+GGG | + | chr7.2:41987632-41987651 | MS.gene46078:intron | 45.0% | |
| TTGGCACCTTATGCTCGAAT+TGG | + | chr7.2:41984909-41984928 | MS.gene46078:CDS | 45.0% | |
| ! | AGGTGATAGTGTTGTGGGAA+AGG | + | chr7.2:41984048-41984067 | MS.gene46078:CDS | 45.0% |
| ! | CAATGCAGAGTGTCTGAACA+TGG | - | chr7.2:41985514-41985533 | None:intergenic | 45.0% |
| ! | GATTGGTCCCCAAGATTAGA+CGG | - | chr7.2:41986314-41986333 | None:intergenic | 45.0% |
| ! | GCGGGTTGTTCATCGAATTT+CGG | + | chr7.2:41983767-41983786 | MS.gene46078:CDS | 45.0% |
| ! | GGTGTTGTGTTTGATGGTAG+TGG | + | chr7.2:41984127-41984146 | MS.gene46078:CDS | 45.0% |
| ! | GTATTTGAAGCTGAAAGGCC+AGG | + | chr7.2:41985212-41985231 | MS.gene46078:CDS | 45.0% |
| ! | GTTGCTCGAGTTGTAAGTGT+CGG | + | chr7.2:41983791-41983810 | MS.gene46078:CDS | 45.0% |
| ! | TGATGACGACAAAGAAGAGG+GGG | + | chr7.2:41984210-41984229 | MS.gene46078:CDS | 45.0% |
| ! | TTGCTCGAGTTGTAAGTGTC+GGG | + | chr7.2:41983792-41983811 | MS.gene46078:CDS | 45.0% |
| ! | TTTTCTGTGCAGCAGAGACT+TGG | + | chr7.2:41985242-41985261 | MS.gene46078:CDS | 45.0% |
| !! | AATGGAAGCTTTGGAAGTGG+CGG | + | chr7.2:41984154-41984173 | MS.gene46078:CDS | 45.0% |
| !! | AGACTCTTTGGGAGAGCTTT+TGG | + | chr7.2:41985958-41985977 | MS.gene46078:intron | 45.0% |
| !! | AGTGGTGGTAATGGAAGCTT+TGG | + | chr7.2:41984145-41984164 | MS.gene46078:CDS | 45.0% |
| !! | CAGGGATCTTTTTGGCCTTT+AGG | + | chr7.2:41984483-41984502 | MS.gene46078:intron | 45.0% |
| !! | CATCAATGGACTGGAACGTT+TGG | + | chr7.2:41987681-41987700 | MS.gene46078:CDS | 45.0% |
| !! | GGTAATGGAAGCTTTGGAAG+TGG | + | chr7.2:41984151-41984170 | MS.gene46078:CDS | 45.0% |
| !! | GTTGTGTTTGATGGTAGTGG+TGG | + | chr7.2:41984130-41984149 | MS.gene46078:CDS | 45.0% |
| !! | TGGCATGCAGTTTGTTGACT+GGG | + | chr7.2:41987789-41987808 | MS.gene46078:CDS | 45.0% |
| !! | TGTCGGGAAAGATGCTGTTT+TGG | + | chr7.2:41983808-41983827 | MS.gene46078:CDS | 45.0% |
| !! | TTGAAGAGTGCTGCTCTTTG+GGG | + | chr7.2:41986689-41986708 | MS.gene46078:CDS | 45.0% |
| !! | TTTGGTAGAAGCATCGCCAA+TGG | + | chr7.2:41987699-41987718 | MS.gene46078:CDS | 45.0% |
| !!! | GTCGGGAAAGATGCTGTTTT+GGG | + | chr7.2:41983809-41983828 | MS.gene46078:CDS | 45.0% |
| !!! | TCGGGAAAGATGCTGTTTTG+GGG | + | chr7.2:41983810-41983829 | MS.gene46078:CDS | 45.0% |
| AAACTCGGTATCTGGCCCAA+TGG | + | chr7.2:41986288-41986307 | MS.gene46078:intron | 50.0% | |
| ACGCGATACCAGGTCATCAA+TGG | + | chr7.2:41987667-41987686 | MS.gene46078:CDS | 50.0% | |
| ACTGTGAAAGCGAGAGCAAC+TGG | - | chr7.2:41987739-41987758 | None:intergenic | 50.0% | |
| AGCACCCCTCATCTGACAAT+TGG | + | chr7.2:41985689-41985708 | MS.gene46078:intron | 50.0% | |
| ATCCTACTGTCCAGTAGAGG+AGG | + | chr7.2:41986331-41986350 | MS.gene46078:intron | 50.0% | |
| CCAATCCTACTGTCCAGTAG+AGG | + | chr7.2:41986328-41986347 | MS.gene46078:intron | 50.0% | |
| CCAATGGCCGTCTAATCTTG+GGG | + | chr7.2:41986304-41986323 | MS.gene46078:intron | 50.0% | |
| CCCAAGATTAGACGGCCATT+GGG | - | chr7.2:41986306-41986325 | None:intergenic | 50.0% | |
| CCCAATGGCCGTCTAATCTT+GGG | + | chr7.2:41986303-41986322 | MS.gene46078:intron | 50.0% | |
| CCTCTACTGGACAGTAGGAT+TGG | - | chr7.2:41986331-41986350 | None:intergenic | 50.0% | |
| GCAGCACTCTTCAAAAGAGG+TGG | - | chr7.2:41986683-41986702 | None:intergenic | 50.0% | |
| GCATGGCCAATTGTCAGATG+AGG | - | chr7.2:41985698-41985717 | None:intergenic | 50.0% | |
| GCGTGTTTGAAGATACCCCA+AGG | - | chr7.2:41987651-41987670 | None:intergenic | 50.0% | |
| GTTGCTCTCGCTTTCACAGT+TGG | + | chr7.2:41987739-41987758 | MS.gene46078:CDS | 50.0% | |
| TCATGCAGGTGTGTTCCTTG+GGG | + | chr7.2:41987633-41987652 | MS.gene46078:intron | 50.0% | |
| TCCTACTGTCCAGTAGAGGA+GGG | + | chr7.2:41986332-41986351 | MS.gene46078:intron | 50.0% | |
| TGTGTGAACAAGTGTGGTGG+TGG | + | chr7.2:41983917-41983936 | MS.gene46078:CDS | 50.0% | |
| TTCGAACCTGAGACCTAGAG+AGG | + | chr7.2:41986425-41986444 | MS.gene46078:intron | 50.0% | |
| TTGGAGGCTGCTAAGACTGT+GGG | + | chr7.2:41984310-41984329 | MS.gene46078:CDS | 50.0% | |
| ! | CTCACCTCTTGTTTGCTACC+AGG | + | chr7.2:41986624-41986643 | MS.gene46078:intron | 50.0% |
| ! | GAGTCGGATTCCAAGAGTGT+TGG | + | chr7.2:41984091-41984110 | MS.gene46078:CDS | 50.0% |
| ! | GTTCCAGTCCATTGATGACC+TGG | - | chr7.2:41987678-41987697 | None:intergenic | 50.0% |
| ! | TTTTAACAACCCCCCGGGAT+TGG | - | chr7.2:41986494-41986513 | None:intergenic | 50.0% |
| !! | AAAGTGCTGGTGTTGGACAC+CGG | - | chr7.2:41987302-41987321 | None:intergenic | 50.0% |
| !! | AGTTTGTTGACTGGGCTAGG+TGG | + | chr7.2:41987797-41987816 | MS.gene46078:CDS | 50.0% |
| !! | ATTGTCAGATGAGGGGTGCT+AGG | - | chr7.2:41985689-41985708 | None:intergenic | 50.0% |
| !! | GCAGGTGTTGGATTTGGATG+TGG | + | chr7.2:41985381-41985400 | MS.gene46078:CDS | 50.0% |
| !! | GTGGCATGCAGTTTGTTGAC+TGG | + | chr7.2:41987788-41987807 | MS.gene46078:CDS | 50.0% |
| !! | TGAGGTATTGAGAGAGACGG+AGG | + | chr7.2:41984258-41984277 | MS.gene46078:CDS | 50.0% |
| !! | TGCAGTTTGTTGACTGGGCT+AGG | + | chr7.2:41987794-41987813 | MS.gene46078:CDS | 50.0% |
| !! | TGTGTTGGGCTAGTCCATAC+AGG | - | chr7.2:41986383-41986402 | None:intergenic | 50.0% |
| AATTGGGTCCCCTCCTCTAC+TGG | - | chr7.2:41986344-41986363 | None:intergenic | 55.0% | |
| ACAGCAGGCTGTGAATCAGC+CGG | - | chr7.2:41984001-41984020 | None:intergenic | 55.0% | |
| AGCATCGCCAATGGCAAAGC+AGG | + | chr7.2:41987708-41987727 | MS.gene46078:CDS | 55.0% | |
| CCCCAAGATTAGACGGCCAT+TGG | - | chr7.2:41986307-41986326 | None:intergenic | 55.0% | |
| CCTACTGTCCAGTAGAGGAG+GGG | + | chr7.2:41986333-41986352 | MS.gene46078:intron | 55.0% | |
| CTTCACCAACAGGCCAATCC+CGG | + | chr7.2:41986478-41986497 | MS.gene46078:intron | 55.0% | |
| GCCCAATGGCCGTCTAATCT+TGG | + | chr7.2:41986302-41986321 | MS.gene46078:intron | 55.0% | |
| GGTGGAACCTGCTTTGCCAT+TGG | - | chr7.2:41987718-41987737 | None:intergenic | 55.0% | |
| GTGAAAGCGAGAGCAACTGG+TGG | - | chr7.2:41987736-41987755 | None:intergenic | 55.0% | |
| GTTGGAGGCTGCTAAGACTG+TGG | + | chr7.2:41984309-41984328 | MS.gene46078:CDS | 55.0% | |
| TAGAGAGGAGCAGACTCCCA+GGG | + | chr7.2:41986440-41986459 | MS.gene46078:intron | 55.0% | |
| TCTGCTCCTCTCTAGGTCTC+AGG | - | chr7.2:41986434-41986453 | None:intergenic | 55.0% | |
| TTCACCAACAGGCCAATCCC+GGG | + | chr7.2:41986479-41986498 | MS.gene46078:intron | 55.0% | |
| ! | AGGGGGAGGTGATAGTGTTG+TGG | + | chr7.2:41984042-41984061 | MS.gene46078:CDS | 55.0% |
| ! | GGGGGAGGTGATAGTGTTGT+GGG | + | chr7.2:41984043-41984062 | MS.gene46078:CDS | 55.0% |
| ! | TGGCCTGTTGGTGAAGGCTT+GGG | - | chr7.2:41986474-41986493 | None:intergenic | 55.0% |
| ! | TTGGCCTGTTGGTGAAGGCT+TGG | - | chr7.2:41986475-41986494 | None:intergenic | 55.0% |
| AGGCTTGGGACCTATAGCCC+TGG | - | chr7.2:41986460-41986479 | None:intergenic | 60.0% | |
| CCCCTCCTCTACTGGACAGT+AGG | - | chr7.2:41986336-41986355 | None:intergenic | 60.0% | |
| CTAGAGAGGAGCAGACTCCC+AGG | + | chr7.2:41986439-41986458 | MS.gene46078:intron | 60.0% | |
| CTGGGAGTCTGCTCCTCTCT+AGG | - | chr7.2:41986441-41986460 | None:intergenic | 60.0% | |
| GAGCAGACTCCCAGGGCTAT+AGG | + | chr7.2:41986447-41986466 | MS.gene46078:intron | 60.0% | |
| GGCTTGGGACCTATAGCCCT+GGG | - | chr7.2:41986459-41986478 | None:intergenic | 60.0% | |
| GGTCCCAAGCCTTCACCAAC+AGG | + | chr7.2:41986468-41986487 | MS.gene46078:intron | 60.0% | |
| GTCTCAGGTTCGAATCCCCC+AGG | - | chr7.2:41986419-41986438 | None:intergenic | 60.0% | |
| TCACCAACAGGCCAATCCCG+GGG | + | chr7.2:41986480-41986499 | MS.gene46078:intron | 60.0% | |
| ! | GTTGACTGGGCTAGGTGGAG+TGG | + | chr7.2:41987802-41987821 | MS.gene46078:CDS | 60.0% |
| ! | TTGAGAGAGACGGAGGCACG+TGG | + | chr7.2:41984265-41984284 | MS.gene46078:CDS | 60.0% |
| !! | AGCTTTGGAAGTGGCGGAGC+AGG | + | chr7.2:41984160-41984179 | MS.gene46078:CDS | 60.0% |
| !! | CGGGATTGGCCTGTTGGTGA+AGG | - | chr7.2:41986480-41986499 | None:intergenic | 60.0% |
| ACCAACAGGCCAATCCCGGG+GGG | + | chr7.2:41986482-41986501 | MS.gene46078:intron | 65.0% | |
| CACCAACAGGCCAATCCCGG+GGG | + | chr7.2:41986481-41986500 | MS.gene46078:intron | 65.0% | |
| CATGTGCATGTCGCAGCCGC+CGG | + | chr7.2:41983979-41983998 | MS.gene46078:CDS | 65.0% | |
| GCAGGCTGTGAATCAGCCGG+CGG | - | chr7.2:41983998-41984017 | None:intergenic | 65.0% | |
| ! | AGTGGCGGAGCAGGAGATGG+TGG | + | chr7.2:41984169-41984188 | MS.gene46078:CDS | 65.0% |
| ! | GGAAGTGGCGGAGCAGGAGA+TGG | + | chr7.2:41984166-41984185 | MS.gene46078:CDS | 65.0% |
| CGGCGGCTGCGACATGCACA+TGG | - | chr7.2:41983981-41984000 | None:intergenic | 70.0% | |
| ! | GGCGGAGCAGGAGATGGTGG+CGG | + | chr7.2:41984172-41984191 | MS.gene46078:CDS | 70.0% |
| !! | ACCCCCCGGGATTGGCCTGT+TGG | - | chr7.2:41986486-41986505 | None:intergenic | 70.0% |
| !! | GCAGGAGATGGTGGCGGTGG+CGG | + | chr7.2:41984178-41984197 | MS.gene46078:CDS | 70.0% |
| !! | GGAGCAGGAGATGGTGGCGG+TGG | + | chr7.2:41984175-41984194 | MS.gene46078:CDS | 70.0% |
| !! | GGAGATGGTGGCGGTGGCGG+TGG | + | chr7.2:41984181-41984200 | MS.gene46078:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 41983764 | 41987834 | 41983764 | ID=MS.gene46078 |
| chr7.2 | mRNA | 41983764 | 41987834 | 41983764 | ID=MS.gene46078.t1;Parent=MS.gene46078 |
| chr7.2 | exon | 41983764 | 41984372 | 41983764 | ID=MS.gene46078.t1.exon1;Parent=MS.gene46078.t1 |
| chr7.2 | CDS | 41983764 | 41984372 | 41983764 | ID=cds.MS.gene46078.t1;Parent=MS.gene46078.t1 |
| chr7.2 | exon | 41984486 | 41984584 | 41984486 | ID=MS.gene46078.t1.exon2;Parent=MS.gene46078.t1 |
| chr7.2 | CDS | 41984486 | 41984584 | 41984486 | ID=cds.MS.gene46078.t1;Parent=MS.gene46078.t1 |
| chr7.2 | exon | 41984777 | 41984997 | 41984777 | ID=MS.gene46078.t1.exon3;Parent=MS.gene46078.t1 |
| chr7.2 | CDS | 41984777 | 41984997 | 41984777 | ID=cds.MS.gene46078.t1;Parent=MS.gene46078.t1 |
| chr7.2 | exon | 41985211 | 41985280 | 41985211 | ID=MS.gene46078.t1.exon4;Parent=MS.gene46078.t1 |
| chr7.2 | CDS | 41985211 | 41985280 | 41985211 | ID=cds.MS.gene46078.t1;Parent=MS.gene46078.t1 |
| chr7.2 | exon | 41985369 | 41985448 | 41985369 | ID=MS.gene46078.t1.exon5;Parent=MS.gene46078.t1 |
| chr7.2 | CDS | 41985369 | 41985448 | 41985369 | ID=cds.MS.gene46078.t1;Parent=MS.gene46078.t1 |
| chr7.2 | exon | 41986646 | 41986710 | 41986646 | ID=MS.gene46078.t1.exon6;Parent=MS.gene46078.t1 |
| chr7.2 | CDS | 41986646 | 41986710 | 41986646 | ID=cds.MS.gene46078.t1;Parent=MS.gene46078.t1 |
| chr7.2 | exon | 41987641 | 41987834 | 41987641 | ID=MS.gene46078.t1.exon7;Parent=MS.gene46078.t1 |
| chr7.2 | CDS | 41987641 | 41987834 | 41987641 | ID=cds.MS.gene46078.t1;Parent=MS.gene46078.t1 |
| Gene Sequence |
| Protein sequence |
