Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46399.t1 | KEH31609.1 | 98.4 | 553 | 9 | 0 | 1 | 553 | 1 | 553 | 4.6e-310 | 1073.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46399.t1 | Q9SQZ0 | 51.2 | 551 | 243 | 6 | 6 | 537 | 40 | 583 | 4.8e-150 | 532.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46399.t1 | A0A072UP38 | 98.4 | 553 | 9 | 0 | 1 | 553 | 1 | 553 | 3.3e-310 | 1073.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052129 | MS.gene46399 | 0.828155 | 1.05E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene46399 | 0.81545 | 9.19E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46399.t1 | MTR_4g099270 | 98.195 | 554 | 10 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1113 |
| MS.gene46399.t1 | MTR_4g099270 | 97.964 | 442 | 9 | 0 | 113 | 554 | 1 | 442 | 0.0 | 887 |
| MS.gene46399.t1 | MTR_4g099270 | 98.615 | 361 | 5 | 0 | 1 | 361 | 22 | 382 | 0.0 | 728 |
| MS.gene46399.t1 | MTR_4g099270 | 98.258 | 287 | 5 | 0 | 1 | 287 | 22 | 308 | 0.0 | 582 |
| MS.gene46399.t1 | MTR_1g111740 | 50.449 | 557 | 253 | 6 | 6 | 552 | 34 | 577 | 0.0 | 550 |
| MS.gene46399.t1 | MTR_1g030660 | 42.669 | 532 | 285 | 6 | 8 | 530 | 53 | 573 | 9.96e-142 | 422 |
| MS.gene46399.t1 | MTR_2g035430 | 41.399 | 529 | 297 | 5 | 10 | 534 | 60 | 579 | 7.65e-141 | 420 |
| MS.gene46399.t1 | MTR_8g089320 | 40.824 | 534 | 301 | 6 | 1 | 529 | 51 | 574 | 9.03e-133 | 400 |
| MS.gene46399.t1 | MTR_8g089360 | 39.746 | 551 | 305 | 8 | 10 | 550 | 48 | 581 | 2.48e-132 | 398 |
| MS.gene46399.t1 | MTR_8g089360 | 39.746 | 551 | 305 | 8 | 10 | 550 | 65 | 598 | 3.30e-132 | 398 |
| MS.gene46399.t1 | MTR_8g461380 | 36.641 | 524 | 319 | 4 | 6 | 526 | 63 | 576 | 3.38e-110 | 341 |
| MS.gene46399.t1 | MTR_8g089340 | 39.220 | 436 | 249 | 6 | 100 | 529 | 2 | 427 | 3.06e-87 | 277 |
| MS.gene46399.t1 | MTR_7g086510 | 37.745 | 408 | 251 | 1 | 9 | 413 | 25 | 432 | 2.98e-73 | 246 |
| MS.gene46399.t1 | MTR_7g086610 | 35.222 | 406 | 260 | 1 | 5 | 407 | 15 | 420 | 3.51e-72 | 242 |
| MS.gene46399.t1 | MTR_6g027680 | 33.661 | 407 | 258 | 4 | 12 | 413 | 36 | 435 | 3.60e-68 | 231 |
| MS.gene46399.t1 | MTR_6g027630 | 33.415 | 407 | 259 | 4 | 12 | 413 | 33 | 432 | 7.65e-67 | 227 |
| MS.gene46399.t1 | MTR_6g027660 | 34.091 | 396 | 252 | 4 | 12 | 401 | 34 | 426 | 1.99e-66 | 227 |
| MS.gene46399.t1 | MTR_6g027630 | 33.415 | 407 | 259 | 4 | 12 | 413 | 33 | 432 | 2.21e-66 | 227 |
| MS.gene46399.t1 | MTR_6g027650 | 31.618 | 408 | 265 | 5 | 9 | 410 | 23 | 422 | 3.79e-64 | 221 |
| MS.gene46399.t1 | MTR_7g007850 | 31.589 | 535 | 337 | 15 | 6 | 526 | 35 | 554 | 5.28e-64 | 219 |
| MS.gene46399.t1 | MTR_7g007850 | 30.605 | 562 | 337 | 17 | 6 | 526 | 35 | 584 | 4.87e-62 | 214 |
| MS.gene46399.t1 | MTR_7g007850 | 36.049 | 405 | 238 | 13 | 6 | 400 | 35 | 428 | 2.10e-59 | 205 |
| MS.gene46399.t1 | MTR_7g007850 | 36.049 | 405 | 238 | 13 | 6 | 400 | 35 | 428 | 3.24e-59 | 206 |
| MS.gene46399.t1 | MTR_6g027630 | 33.051 | 354 | 225 | 4 | 65 | 413 | 1 | 347 | 2.93e-53 | 189 |
| MS.gene46399.t1 | MTR_6g034535 | 33.761 | 234 | 138 | 4 | 315 | 537 | 89 | 316 | 6.00e-31 | 123 |
| MS.gene46399.t1 | MTR_8g089342 | 48.315 | 89 | 46 | 0 | 1 | 89 | 52 | 140 | 2.25e-23 | 96.7 |
| MS.gene46399.t1 | MTR_6g027670 | 32.164 | 171 | 111 | 1 | 243 | 413 | 1 | 166 | 1.02e-21 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46399.t1 | AT5G04770 | 52.886 | 537 | 235 | 6 | 6 | 531 | 41 | 570 | 0.0 | 554 |
| MS.gene46399.t1 | AT3G10600 | 51.277 | 548 | 241 | 6 | 9 | 537 | 43 | 583 | 0.0 | 533 |
| MS.gene46399.t1 | AT4G21120 | 42.802 | 521 | 286 | 4 | 9 | 526 | 57 | 568 | 1.10e-152 | 450 |
| MS.gene46399.t1 | AT3G10600 | 49.324 | 444 | 199 | 6 | 113 | 537 | 1 | 437 | 1.53e-144 | 424 |
| MS.gene46399.t1 | AT5G04770 | 51.163 | 430 | 192 | 6 | 113 | 531 | 1 | 423 | 2.63e-141 | 416 |
| MS.gene46399.t1 | AT5G04770 | 55.108 | 372 | 159 | 3 | 6 | 370 | 41 | 411 | 5.64e-140 | 411 |
| MS.gene46399.t1 | AT2G34960 | 38.806 | 536 | 307 | 7 | 8 | 539 | 50 | 568 | 8.40e-128 | 386 |
| MS.gene46399.t1 | AT1G17120 | 40.344 | 523 | 287 | 6 | 10 | 523 | 69 | 575 | 1.40e-118 | 363 |
| MS.gene46399.t1 | AT4G21120 | 40.749 | 427 | 241 | 4 | 103 | 526 | 1 | 418 | 1.22e-110 | 337 |
| MS.gene46399.t1 | AT3G03720 | 36.224 | 392 | 245 | 3 | 14 | 401 | 16 | 406 | 1.02e-74 | 248 |
| MS.gene46399.t1 | AT5G36940 | 35.606 | 396 | 252 | 1 | 21 | 413 | 28 | 423 | 5.09e-70 | 236 |
| MS.gene46399.t1 | AT1G58030 | 34.430 | 395 | 256 | 1 | 16 | 407 | 34 | 428 | 5.46e-70 | 237 |
| MS.gene46399.t1 | AT1G05940 | 31.227 | 538 | 334 | 9 | 7 | 525 | 33 | 553 | 1.85e-65 | 223 |
| MS.gene46399.t1 | AT1G05940 | 35.000 | 400 | 248 | 5 | 7 | 399 | 33 | 427 | 1.41e-61 | 211 |
| MS.gene46399.t1 | AT1G05940 | 35.000 | 400 | 248 | 5 | 7 | 399 | 33 | 427 | 2.73e-61 | 211 |
| MS.gene46399.t1 | AT1G05940 | 28.475 | 446 | 285 | 7 | 98 | 525 | 6 | 435 | 1.61e-40 | 152 |
Find 137 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTCACTTGGTTGAATTCT+TGG | 0.073222 | 8.4:-23721686 | None:intergenic |
| AGCCGAGGAGATTGAGAATT+TGG | 0.146226 | 8.4:+23725474 | MS.gene46399:CDS |
| GGAGAATTCTTGGGATATTT+TGG | 0.185427 | 8.4:+23722176 | MS.gene46399:intron |
| TCACTCTTTGCTTGTGTCAT+AGG | 0.192722 | 8.4:+23722378 | MS.gene46399:CDS |
| AAGTTGGTTACACTCAAATT+TGG | 0.199523 | 8.4:-23725517 | None:intergenic |
| CTGTTTGAATTTCCAAACTA+TGG | 0.229022 | 8.4:-23725182 | None:intergenic |
| TCAATGGCTTTCCTTAATAT+TGG | 0.256994 | 8.4:+23724591 | MS.gene46399:CDS |
| CCCAACTCCAACCAATATTA+AGG | 0.269543 | 8.4:-23724602 | None:intergenic |
| CCTTATGCTTCTCCATAGTT+TGG | 0.287271 | 8.4:+23725170 | MS.gene46399:CDS |
| CCATAAGGAGCTATCCCTTT+TGG | 0.287938 | 8.4:-23722978 | None:intergenic |
| AACTTTACTTTATTGCCTAA+TGG | 0.315376 | 8.4:+23723139 | MS.gene46399:CDS |
| TCCTTAATATTGGTTGGAGT+TGG | 0.318656 | 8.4:+23724601 | MS.gene46399:CDS |
| TCTCTTCTAGTTGCAATGTT+AGG | 0.325505 | 8.4:+23724669 | MS.gene46399:CDS |
| ACATGAAAAGGAAACTTAAT+TGG | 0.331326 | 8.4:+23721724 | MS.gene46399:CDS |
| TCCCATGACACAAAGGTATC+TGG | 0.331917 | 8.4:-23724697 | None:intergenic |
| CTTTCCAACGCTTTGCTATA+TGG | 0.333799 | 8.4:+23725398 | MS.gene46399:CDS |
| TTATGATGCAGGAGAATTCT+TGG | 0.344760 | 8.4:+23722166 | MS.gene46399:intron |
| ATAGTGTACTTTAGTTATAT+AGG | 0.350941 | 8.4:+23723029 | MS.gene46399:CDS |
| GCAGTTCAAGTTCCAGTTGC+TGG | 0.352519 | 8.4:+23721906 | MS.gene46399:CDS |
| GTTGGAGCAGGTGCAAGTTT+AGG | 0.353177 | 8.4:+23724636 | MS.gene46399:CDS |
| CCAATAGGTAGGCTCTTATA+AGG | 0.355464 | 8.4:-23723092 | None:intergenic |
| CATGATGGTTCCTTACAATA+AGG | 0.362306 | 8.4:+23723175 | MS.gene46399:CDS |
| TGTCATAATGAGGTTCAATA+TGG | 0.363868 | 8.4:-23722880 | None:intergenic |
| TCCAACATGTTATAATCCTT+TGG | 0.364236 | 8.4:-23722326 | None:intergenic |
| CTTCAGCTAACTAACGCATT+TGG | 0.368274 | 8.4:-23725558 | None:intergenic |
| CCTGTTGCTCTTCATCAATC+TGG | 0.370196 | 8.4:+23721810 | MS.gene46399:CDS |
| ACTTGGTTGAATTCTTGGTC+TGG | 0.370346 | 8.4:-23721681 | None:intergenic |
| AGTTGGTTACACTCAAATTT+GGG | 0.376212 | 8.4:-23725516 | None:intergenic |
| GGTGTTAGAGGTGTTCTTGA+TGG | 0.391791 | 8.4:+23722999 | MS.gene46399:CDS |
| GTTGGTGTGTTTGTTACTAC+TGG | 0.394063 | 8.4:+23721786 | MS.gene46399:CDS |
| GGCTCTGTCTTTGTGCATGA+TGG | 0.401655 | 8.4:+23723160 | MS.gene46399:CDS |
| CTGAAAGCTCCTCCAGCAAC+TGG | 0.405724 | 8.4:-23721918 | None:intergenic |
| TTTATTTCCTATATCATAGC+TGG | 0.406170 | 8.4:+23721843 | MS.gene46399:CDS |
| CCTTATAAGAGCCTACCTAT+TGG | 0.406403 | 8.4:+23723092 | MS.gene46399:CDS |
| CCAAAAGGGATAGCTCCTTA+TGG | 0.407325 | 8.4:+23722978 | MS.gene46399:CDS |
| CCTTAATATTGGTTGGAGTT+GGG | 0.411834 | 8.4:+23724602 | MS.gene46399:CDS |
| ATAGCTCCTTATGGTGTTAG+AGG | 0.412926 | 8.4:+23722987 | MS.gene46399:CDS |
| TGGTATGATCTTGTAGCTCT+TGG | 0.419437 | 8.4:+23721744 | MS.gene46399:CDS |
| CCAGATTGATGAAGAGCAAC+AGG | 0.428383 | 8.4:-23721810 | None:intergenic |
| GCCGAGGAGATTGAGAATTT+GGG | 0.430127 | 8.4:+23725475 | MS.gene46399:CDS |
| CACCAGACCTCTGCCTCACT+TGG | 0.433168 | 8.4:-23721698 | None:intergenic |
| GATTAGCATTGGCACGCTAA+TGG | 0.433590 | 8.4:+23725042 | MS.gene46399:CDS |
| TGGTGGGGCAAATATACTAA+TGG | 0.434674 | 8.4:+23722196 | MS.gene46399:CDS |
| GGGCAAGGCTTGTTCCATCT+TGG | 0.436918 | 8.4:+23724721 | MS.gene46399:CDS |
| TTTGGATTCATCGTTGTGGC+TGG | 0.438413 | 8.4:+23722921 | MS.gene46399:CDS |
| GAGAAAATAATCCCAATGTA+TGG | 0.450687 | 8.4:+23722282 | MS.gene46399:CDS |
| AGGTGCAAGTTTAGGTATAG+TGG | 0.451944 | 8.4:+23724644 | MS.gene46399:CDS |
| GAGCCTACCTATTGGAATAG+TGG | 0.452705 | 8.4:+23723100 | MS.gene46399:CDS |
| ACTGAACCCACTATTCCAAT+AGG | 0.453533 | 8.4:-23723107 | None:intergenic |
| GCCAGATACCTTTGTGTCAT+GGG | 0.453690 | 8.4:+23724696 | MS.gene46399:CDS |
| TATGATGCAGGAGAATTCTT+GGG | 0.458515 | 8.4:+23722167 | MS.gene46399:intron |
| GATCTTGTAGCTCTTGGAGT+TGG | 0.460545 | 8.4:+23721750 | MS.gene46399:CDS |
| AGTTATTTAAGATTAACATT+TGG | 0.461337 | 8.4:+23721939 | MS.gene46399:CDS |
| AGTTGGGCAAGCAACATTGT+TGG | 0.465245 | 8.4:+23724618 | MS.gene46399:CDS |
| ATAATTGAGTTGATTAGCAT+TGG | 0.467575 | 8.4:+23725031 | MS.gene46399:CDS |
| TGGCTTTCCTTAATATTGGT+TGG | 0.469455 | 8.4:+23724595 | MS.gene46399:CDS |
| CTTGGAGTTGGAGGAATGCT+TGG | 0.469596 | 8.4:+23721762 | MS.gene46399:CDS |
| TGGTGGGGTCTCTTACTCTT+CGG | 0.470816 | 8.4:+23725208 | MS.gene46399:CDS |
| CTTGTAGCTCTTGGAGTTGG+AGG | 0.471002 | 8.4:+23721753 | MS.gene46399:CDS |
| GCCAAAGTACATCCTTCAAC+AGG | 0.471515 | 8.4:+23724747 | MS.gene46399:CDS |
| GTATGGAGAGTGGAAGTTCA+TGG | 0.471951 | 8.4:+23722299 | MS.gene46399:CDS |
| TGTAACCAACTTACAAACTA+AGG | 0.473407 | 8.4:+23725528 | MS.gene46399:CDS |
| TGTACAAGGTTGTTGTTACA+AGG | 0.475149 | 8.4:-23725274 | None:intergenic |
| CCAAACTATGGAGAAGCATA+AGG | 0.477093 | 8.4:-23725170 | None:intergenic |
| TTCCACCTTAGTTTGTAAGT+TGG | 0.479933 | 8.4:-23725533 | None:intergenic |
| ATATGACTGACCTTATTGTA+AGG | 0.480341 | 8.4:-23723185 | None:intergenic |
| GGTCTGGTGCAGACATGAAA+AGG | 0.485575 | 8.4:+23721712 | MS.gene46399:CDS |
| ACTTCCACTCTCCATACATT+GGG | 0.486802 | 8.4:-23722293 | None:intergenic |
| CACGCTAATGGTGTTCTACA+TGG | 0.494994 | 8.4:+23725054 | MS.gene46399:CDS |
| AACCAAGTGAGGCAGAGGTC+TGG | 0.496317 | 8.4:+23721696 | MS.gene46399:CDS |
| TCTCAAATGCTGCTGTAGCT+AGG | 0.500116 | 8.4:+23722228 | MS.gene46399:CDS |
| AGCCTACCTATTGGAATAGT+GGG | 0.500222 | 8.4:+23723101 | MS.gene46399:CDS |
| GCCTGTTGAAGGATGTACTT+TGG | 0.501517 | 8.4:-23724748 | None:intergenic |
| GTTGGAGGAATGCTTGGTGT+TGG | 0.502228 | 8.4:+23721768 | MS.gene46399:CDS |
| GGAAATTCAAACAGCAATGG+TGG | 0.509718 | 8.4:+23725191 | MS.gene46399:CDS |
| AGAACACCTCTAACACCATA+AGG | 0.511059 | 8.4:-23722993 | None:intergenic |
| TGATATTCCAGCTATGATAT+AGG | 0.513325 | 8.4:-23721850 | None:intergenic |
| GAAGGTGGCCATGGCATGAA+TGG | 0.513555 | 8.4:-23725325 | None:intergenic |
| GCAAGCAACATTGTTGGAGC+AGG | 0.513760 | 8.4:+23724624 | MS.gene46399:CDS |
| AGAGAAAGCATCATATTCAA+TGG | 0.515624 | 8.4:+23724575 | MS.gene46399:CDS |
| AAGTGAGGGAGAGAAGAAAG+AGG | 0.516262 | 8.4:-23725147 | None:intergenic |
| AACTTCCACTCTCCATACAT+TGG | 0.516853 | 8.4:-23722294 | None:intergenic |
| AAAACTTGGTTAATCCAAAA+GGG | 0.521490 | 8.4:+23722964 | MS.gene46399:CDS |
| GCCAAAGGATTATAACATGT+TGG | 0.521646 | 8.4:+23722325 | MS.gene46399:CDS |
| AACCATGGCTGAGGAGGTCA+AGG | 0.523071 | 8.4:+23723067 | MS.gene46399:CDS |
| GAAATTCAAACAGCAATGGT+GGG | 0.526735 | 8.4:+23725192 | MS.gene46399:CDS |
| AGAAGAATGAGAGCTACTGC+TGG | 0.527933 | 8.4:-23722353 | None:intergenic |
| ATGGACATTGAAGGTGGCCA+TGG | 0.537476 | 8.4:-23725334 | None:intergenic |
| AGCCAGATACCTTTGTGTCA+TGG | 0.541144 | 8.4:+23724695 | MS.gene46399:CDS |
| GAGCATATTCTTGTTGTACA+AGG | 0.543125 | 8.4:-23725288 | None:intergenic |
| AGCTTCAACCATGGCTGAGG+AGG | 0.545111 | 8.4:+23723061 | MS.gene46399:CDS |
| TGCACAAAGACAGAGCCATT+AGG | 0.546466 | 8.4:-23723154 | None:intergenic |
| GTGTGTGTAAAGGCGGTGTA+TGG | 0.548779 | 8.4:-23725117 | None:intergenic |
| AACAAGAATATGCTCAATGT+TGG | 0.550044 | 8.4:+23725296 | MS.gene46399:CDS |
| ATCCTTGACCTCCTCAGCCA+TGG | 0.551869 | 8.4:-23723069 | None:intergenic |
| GATGATTGATTTCAGTACAA+AGG | 0.552981 | 8.4:+23722851 | MS.gene46399:intron |
| TTCAGCTTCAACCATGGCTG+AGG | 0.555396 | 8.4:+23723058 | MS.gene46399:CDS |
| TTCAATGGAGTGCCTGTTGA+AGG | 0.556143 | 8.4:-23724759 | None:intergenic |
| GGAGAAGCATAAGGAAGTGA+GGG | 0.556959 | 8.4:-23725161 | None:intergenic |
| GATACCTTTGTGTCATGGGA+AGG | 0.563239 | 8.4:+23724700 | MS.gene46399:CDS |
| TTGAGGAAGATGGACATTGA+AGG | 0.567242 | 8.4:-23725343 | None:intergenic |
| ACCCAAATTCTCAATCTCCT+CGG | 0.568939 | 8.4:-23725476 | None:intergenic |
| TGGAGAAGCATAAGGAAGTG+AGG | 0.569100 | 8.4:-23725162 | None:intergenic |
| AATTCAACCAAGTGAGGCAG+AGG | 0.569150 | 8.4:+23721691 | MS.gene46399:CDS |
| TTTGGAAATTCAAACAGCAA+TGG | 0.571143 | 8.4:+23725188 | MS.gene46399:CDS |
| TGTACTTTGGCTAACCAAGA+TGG | 0.571883 | 8.4:-23724735 | None:intergenic |
| TACCGTCGCTATGTAATCAT+CGG | 0.577579 | 8.4:+23725094 | MS.gene46399:CDS |
| ATGACCATATAGCAAAGCGT+TGG | 0.577715 | 8.4:-23725402 | None:intergenic |
| CTATGATTCAGCTTCAACCA+TGG | 0.580237 | 8.4:+23723052 | MS.gene46399:CDS |
| ATACCTTTGTGTCATGGGAA+GGG | 0.590763 | 8.4:+23724701 | MS.gene46399:CDS |
| TAATCCCAATGTATGGAGAG+TGG | 0.592516 | 8.4:+23722289 | MS.gene46399:CDS |
| CATGGAACACTGTCATAATG+AGG | 0.594067 | 8.4:-23722890 | None:intergenic |
| GTTGTGGCTGGTTATTACAA+TGG | 0.594223 | 8.4:+23722933 | MS.gene46399:CDS |
| GTTCAAGTTCCAGTTGCTGG+AGG | 0.596218 | 8.4:+23721909 | MS.gene46399:CDS |
| GGAAAAGAATGCTAGCAACA+TGG | 0.601745 | 8.4:+23721655 | None:intergenic |
| TGTTACAAGGCACCATGTGT+TGG | 0.603576 | 8.4:-23725261 | None:intergenic |
| AGGAACAAAAGTGTGTGTAA+AGG | 0.603696 | 8.4:-23725127 | None:intergenic |
| GGAAGTTCATGGATTGCCAA+AGG | 0.604127 | 8.4:+23722310 | MS.gene46399:CDS |
| TTTGGGTGGTGTTAATCAAG+TGG | 0.606482 | 8.4:+23725492 | MS.gene46399:CDS |
| GGTATGTGCCATTCATGCCA+TGG | 0.610730 | 8.4:+23725317 | MS.gene46399:CDS |
| TTTCTTTGGATTCATCGTTG+TGG | 0.629846 | 8.4:+23722917 | MS.gene46399:CDS |
| TGGGGTCTCTTACTCTTCGG+TGG | 0.630179 | 8.4:+23725211 | MS.gene46399:CDS |
| AACAAAAGTGTGTGTAAAGG+CGG | 0.630640 | 8.4:-23725124 | None:intergenic |
| ACCAAGAATTCAACCAAGTG+AGG | 0.631416 | 8.4:+23721685 | MS.gene46399:CDS |
| ATATAGGAAATAAAGACTGA+AGG | 0.634540 | 8.4:-23721834 | None:intergenic |
| AAATTCAAACAGCAATGGTG+GGG | 0.636518 | 8.4:+23725193 | MS.gene46399:CDS |
| AACCAACTTACAAACTAAGG+TGG | 0.646197 | 8.4:+23725531 | MS.gene46399:CDS |
| GAGGAGATTGAGAATTTGGG+TGG | 0.655023 | 8.4:+23725478 | MS.gene46399:CDS |
| ACCATAAAGCACATAAAACA+TGG | 0.658020 | 8.4:-23725434 | None:intergenic |
| AGGAAGATGGACATTGAAGG+TGG | 0.658680 | 8.4:-23725340 | None:intergenic |
| TTTGTGTCATGGGAAGGGCA+AGG | 0.658768 | 8.4:+23724706 | MS.gene46399:CDS |
| TTGCCCTTCCCATGACACAA+AGG | 0.659610 | 8.4:-23724704 | None:intergenic |
| GGCCGATGATTACATAGCGA+CGG | 0.666130 | 8.4:-23725096 | None:intergenic |
| TGAATCCAAAGAAAATCACA+TGG | 0.692143 | 8.4:-23722908 | None:intergenic |
| TCACTCTACATATCAAGCCG+AGG | 0.695776 | 8.4:+23725459 | MS.gene46399:CDS |
| TATGACACAAGCAAAGAGTG+AGG | 0.719524 | 8.4:-23722376 | None:intergenic |
| AACCCACTATTCCAATAGGT+AGG | 0.722428 | 8.4:-23723103 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAGGAAAATAA+TGG | + | chr8.4:23724146-23724165 | MS.gene46399:intron | 10.0% |
| !! | AAAAAAAAAAGGAAAATAAT+GGG | + | chr8.4:23724147-23724166 | MS.gene46399:intron | 10.0% |
| !! | AAGAATGATAATTATTTATT+TGG | - | chr8.4:23722824-23722843 | None:intergenic | 10.0% |
| !! | ATATTCAAAATTGTAAATAA+TGG | - | chr8.4:23722749-23722768 | None:intergenic | 10.0% |
| !!! | AAATTTTCAAAAATATTTGA+TGG | - | chr8.4:23724818-23724837 | None:intergenic | 10.0% |
| !!! | AATTTAAAACTATACTAATT+AGG | + | chr8.4:23722610-23722629 | MS.gene46399:intron | 10.0% |
| !!! | ATATTTTGTCAAAAAAAAAT+TGG | - | chr8.4:23723861-23723880 | None:intergenic | 10.0% |
| !!! | TATAAAATTTAATGGATAAT+TGG | + | chr8.4:23724185-23724204 | MS.gene46399:intron | 10.0% |
| !!! | TTAAATTTTTTGATTAAATG+TGG | + | chr8.4:23724047-23724066 | MS.gene46399:intron | 10.0% |
| !!! | TTATTTTCCTTTTTTTTTTT+TGG | - | chr8.4:23724146-23724165 | None:intergenic | 10.0% |
| !! | TGAATGTATAATTACTAAAA+TGG | + | chr8.4:23723649-23723668 | MS.gene46399:intron | 15.0% |
| !! | TTTAATTCAAATACATTGTT+AGG | - | chr8.4:23723340-23723359 | None:intergenic | 15.0% |
| !!! | AGTTATTTAAGATTAACATT+TGG | + | chr8.4:23721939-23721958 | MS.gene46399:CDS | 15.0% |
| !!! | ATTAGTATAGTTTTAAATTG+TGG | - | chr8.4:23722609-23722628 | None:intergenic | 15.0% |
| !!! | TACAATTTTGAATATTTAAC+TGG | + | chr8.4:23722754-23722773 | MS.gene46399:intron | 15.0% |
| !! | ACTATACTAATTAGGTTAAT+TGG | + | chr8.4:23722618-23722637 | MS.gene46399:intron | 20.0% |
| !! | ATAGTGTACTTTAGTTATAT+AGG | + | chr8.4:23723029-23723048 | MS.gene46399:CDS | 20.0% |
| !! | ATATCAAACTAAAAAACAGA+AGG | - | chr8.4:23722442-23722461 | None:intergenic | 20.0% |
| !! | CATAGCTATATACAAATAAA+TGG | + | chr8.4:23723673-23723692 | MS.gene46399:intron | 20.0% |
| !! | CTATACTAATTAGGTTAATT+GGG | + | chr8.4:23722619-23722638 | MS.gene46399:intron | 20.0% |
| !! | TAGTTAATTGTCTTATCTTT+GGG | + | chr8.4:23724865-23724884 | MS.gene46399:intron | 20.0% |
| !! | TATACTAATTAGGTTAATTG+GGG | + | chr8.4:23722620-23722639 | MS.gene46399:intron | 20.0% |
| !! | TATTTGAATTAAATACGTCT+AGG | + | chr8.4:23723347-23723366 | MS.gene46399:intron | 20.0% |
| !! | TGAAAGAATTGATATATGTT+TGG | + | chr8.4:23723559-23723578 | MS.gene46399:intron | 20.0% |
| !! | TGTATAAAATATCCAAAACT+TGG | + | chr8.4:23723982-23724001 | MS.gene46399:intron | 20.0% |
| !! | TTAAATACAAACCAAAATGA+AGG | + | chr8.4:23724079-23724098 | MS.gene46399:intron | 20.0% |
| !! | TTAGTTAATTGTCTTATCTT+TGG | + | chr8.4:23724864-23724883 | MS.gene46399:intron | 20.0% |
| !! | TTATTAGTTGAACAATGAAT+TGG | + | chr8.4:23723438-23723457 | MS.gene46399:intron | 20.0% |
| !!! | AAGCTATATATTCTTTGAAA+TGG | + | chr8.4:23724540-23724559 | MS.gene46399:intron | 20.0% |
| !!! | CTTGACCATAAATATTTTTT+GGG | + | chr8.4:23724010-23724029 | MS.gene46399:intron | 20.0% |
| !!! | GAACTGTATTTTTTCTTTTT+TGG | - | chr8.4:23723949-23723968 | None:intergenic | 20.0% |
| !!! | TATGTTAGTATTTTTCTTCA+GGG | - | chr8.4:23723380-23723399 | None:intergenic | 20.0% |
| !!! | TCTTGACCATAAATATTTTT+TGG | + | chr8.4:23724009-23724028 | MS.gene46399:intron | 20.0% |
| !!! | TGTTTTTTATAATGAAAGGA+TGG | + | chr8.4:23722710-23722729 | MS.gene46399:intron | 20.0% |
| !!! | TTATGTTAGTATTTTTCTTC+AGG | - | chr8.4:23723381-23723400 | None:intergenic | 20.0% |
| !!! | TTGACCATAAATATTTTTTG+GGG | + | chr8.4:23724011-23724030 | MS.gene46399:intron | 20.0% |
| !!! | TTGGTGTTTTTTATAATGAA+AGG | + | chr8.4:23722706-23722725 | MS.gene46399:intron | 20.0% |
| !!! | TTTAGTTTGATATTGTATCA+AGG | + | chr8.4:23722449-23722468 | MS.gene46399:intron | 20.0% |
| ! | AAAAACTTGGTTAATCCAAA+AGG | + | chr8.4:23722963-23722982 | MS.gene46399:CDS | 25.0% |
| ! | AAAACTTGGTTAATCCAAAA+GGG | + | chr8.4:23722964-23722983 | MS.gene46399:CDS | 25.0% |
| ! | AAATGAAGGAGAATTGATAA+AGG | + | chr8.4:23724093-23724112 | MS.gene46399:intron | 25.0% |
| ! | AACTTTACTTTATTGCCTAA+TGG | + | chr8.4:23723139-23723158 | MS.gene46399:CDS | 25.0% |
| ! | AATTCAAATACATTGTTAGG+CGG | - | chr8.4:23723337-23723356 | None:intergenic | 25.0% |
| ! | ACATGAAAAGGAAACTTAAT+TGG | + | chr8.4:23721724-23721743 | MS.gene46399:CDS | 25.0% |
| ! | AGGACAATAAAGGAAAATAA+TGG | + | chr8.4:23724113-23724132 | MS.gene46399:intron | 25.0% |
| ! | AGTTAATTGTCTTATCTTTG+GGG | + | chr8.4:23724866-23724885 | MS.gene46399:intron | 25.0% |
| ! | ATATAAATTACGTGTGTGTT+TGG | + | chr8.4:23723467-23723486 | MS.gene46399:intron | 25.0% |
| ! | ATATAGGAAATAAAGACTGA+AGG | - | chr8.4:23721837-23721856 | None:intergenic | 25.0% |
| ! | CTTCAAAATCCTTTATATTG+CGG | + | chr8.4:23722576-23722595 | MS.gene46399:intron | 25.0% |
| ! | GAATTGATAAAGGACAATAA+AGG | + | chr8.4:23724103-23724122 | MS.gene46399:intron | 25.0% |
| ! | GGACAATAAAGGAAAATAAT+GGG | + | chr8.4:23724114-23724133 | MS.gene46399:intron | 25.0% |
| ! | GTGTTCACCAAAAAAAAAAA+AGG | + | chr8.4:23724136-23724155 | MS.gene46399:intron | 25.0% |
| ! | TAAAGAGAATGAATGTTGTT+TGG | + | chr8.4:23723603-23723622 | MS.gene46399:intron | 25.0% |
| ! | TTAGCCCCAAAAAATATTTA+TGG | - | chr8.4:23724018-23724037 | None:intergenic | 25.0% |
| ! | TTTATTTCCTATATCATAGC+TGG | + | chr8.4:23721843-23721862 | MS.gene46399:CDS | 25.0% |
| !! | AAGTTAAATAATAATGGAGC+TGG | + | chr8.4:23723920-23723939 | MS.gene46399:intron | 25.0% |
| !! | TTATCAATTCTCCTTCATTT+TGG | - | chr8.4:23724093-23724112 | None:intergenic | 25.0% |
| !! | TTTTGGATTAACCAAGTTTT+TGG | - | chr8.4:23722964-23722983 | None:intergenic | 25.0% |
| !!! | AATATTTTTTGGGGCTAATT+TGG | + | chr8.4:23724020-23724039 | MS.gene46399:intron | 25.0% |
| !!! | AATTGCCTTTTTCAATTTTG+AGG | + | chr8.4:23724303-23724322 | MS.gene46399:intron | 25.0% |
| !!! | ATAATTGAGTTGATTAGCAT+TGG | + | chr8.4:23725031-23725050 | MS.gene46399:CDS | 25.0% |
| !!! | GAATATTTGAGTTTTGCTTT+TGG | + | chr8.4:23722260-23722279 | MS.gene46399:CDS | 25.0% |
| AAAAACTGTGATTGTGATCA+TGG | - | chr8.4:23725239-23725258 | None:intergenic | 30.0% | |
| AACAAGAATATGCTCAATGT+TGG | + | chr8.4:23725296-23725315 | MS.gene46399:CDS | 30.0% | |
| AATATCCACCCAATGAAATA+AGG | - | chr8.4:23722648-23722667 | None:intergenic | 30.0% | |
| ACCATAAAGCACATAAAACA+TGG | - | chr8.4:23725437-23725456 | None:intergenic | 30.0% | |
| AGTTGGTTACACTCAAATTT+GGG | - | chr8.4:23725519-23725538 | None:intergenic | 30.0% | |
| ATATGACTGACCTTATTGTA+AGG | - | chr8.4:23723188-23723207 | None:intergenic | 30.0% | |
| ATCAATTCATTTATTGACGC+AGG | + | chr8.4:23724965-23724984 | MS.gene46399:intron | 30.0% | |
| CTGTTTGAATTTCCAAACTA+TGG | - | chr8.4:23725185-23725204 | None:intergenic | 30.0% | |
| GAGAAAATAATCCCAATGTA+TGG | + | chr8.4:23722282-23722301 | MS.gene46399:CDS | 30.0% | |
| TAGAGCCTCAAAATTGAAAA+AGG | - | chr8.4:23724311-23724330 | None:intergenic | 30.0% | |
| TAGTCATGAGAAAAACATTG+AGG | - | chr8.4:23725363-23725382 | None:intergenic | 30.0% | |
| TCAATGGCTTTCCTTAATAT+TGG | + | chr8.4:23724591-23724610 | MS.gene46399:CDS | 30.0% | |
| TCCAACATGTTATAATCCTT+TGG | - | chr8.4:23722329-23722348 | None:intergenic | 30.0% | |
| TGAATCCAAAGAAAATCACA+TGG | - | chr8.4:23722911-23722930 | None:intergenic | 30.0% | |
| TGATATTCCAGCTATGATAT+AGG | - | chr8.4:23721853-23721872 | None:intergenic | 30.0% | |
| TGCAAAATGCGAAAAAAATG+TGG | + | chr8.4:23722513-23722532 | MS.gene46399:intron | 30.0% | |
| TGTAACCAACTTACAAACTA+AGG | + | chr8.4:23725528-23725547 | MS.gene46399:CDS | 30.0% | |
| TGTCATAATGAGGTTCAATA+TGG | - | chr8.4:23722883-23722902 | None:intergenic | 30.0% | |
| TTAATTGCTTTACCTCTAGA+AGG | - | chr8.4:23724420-23724439 | None:intergenic | 30.0% | |
| TTTGGAAATTCAAACAGCAA+TGG | + | chr8.4:23725188-23725207 | MS.gene46399:CDS | 30.0% | |
| ! | AAAAAGATAGTGGCATTCAA+TGG | - | chr8.4:23724777-23724796 | None:intergenic | 30.0% |
| ! | AAGGCAATTTTTCACATGTT+TGG | - | chr8.4:23724292-23724311 | None:intergenic | 30.0% |
| ! | AAGTTGGTTACACTCAAATT+TGG | - | chr8.4:23725520-23725539 | None:intergenic | 30.0% |
| ! | ACCATGTTTTATGTGCTTTA+TGG | + | chr8.4:23725433-23725452 | MS.gene46399:CDS | 30.0% |
| ! | ATTGAATGCCACTATCTTTT+TGG | + | chr8.4:23724776-23724795 | MS.gene46399:CDS | 30.0% |
| ! | GATGATTGATTTCAGTACAA+AGG | + | chr8.4:23722851-23722870 | MS.gene46399:intron | 30.0% |
| ! | TTCTAGTTAACTCAAAAGCT+AGG | + | chr8.4:23724208-23724227 | MS.gene46399:intron | 30.0% |
| ! | TTGAATGCCACTATCTTTTT+GGG | + | chr8.4:23724777-23724796 | MS.gene46399:CDS | 30.0% |
| !! | AGAGAAAGCATCATATTCAA+TGG | + | chr8.4:23724575-23724594 | MS.gene46399:CDS | 30.0% |
| !! | GAATATTTAACTGGCTTTAG+TGG | + | chr8.4:23722763-23722782 | MS.gene46399:intron | 30.0% |
| !!! | AATTCTTGGGATATTTTGGT+GGG | + | chr8.4:23722180-23722199 | MS.gene46399:CDS | 30.0% |
| !!! | TCTTTTTTTGCTTATGATGC+AGG | + | chr8.4:23722155-23722174 | MS.gene46399:intron | 30.0% |
| AAATTCAAACAGCAATGGTG+GGG | + | chr8.4:23725193-23725212 | MS.gene46399:CDS | 35.0% | |
| AACCAACTTACAAACTAAGG+TGG | + | chr8.4:23725531-23725550 | MS.gene46399:CDS | 35.0% | |
| CATGATGGTTCCTTACAATA+AGG | + | chr8.4:23723175-23723194 | MS.gene46399:CDS | 35.0% | |
| CGAAAAAAATGTGGTTGACA+TGG | + | chr8.4:23722522-23722541 | MS.gene46399:intron | 35.0% | |
| CTAGTTAGAATTCCTTCTAG+AGG | + | chr8.4:23724405-23724424 | MS.gene46399:intron | 35.0% | |
| GAAATTCAAACAGCAATGGT+GGG | + | chr8.4:23725192-23725211 | MS.gene46399:CDS | 35.0% | |
| GAGAAAAACATTGAGGAAGA+TGG | - | chr8.4:23725356-23725375 | None:intergenic | 35.0% | |
| GCCAAAGGATTATAACATGT+TGG | + | chr8.4:23722325-23722344 | MS.gene46399:CDS | 35.0% | |
| TAGAATAAGCTGAACCAAAC+AGG | + | chr8.4:23724347-23724366 | MS.gene46399:intron | 35.0% | |
| TATGATGCAGGAGAATTCTT+GGG | + | chr8.4:23722167-23722186 | MS.gene46399:intron | 35.0% | |
| TCAAGCTCTTATCATTAAGC+CGG | - | chr8.4:23724894-23724913 | None:intergenic | 35.0% | |
| TGGCTTTCCTTAATATTGGT+TGG | + | chr8.4:23724595-23724614 | MS.gene46399:CDS | 35.0% | |
| TTATGATGCAGGAGAATTCT+TGG | + | chr8.4:23722166-23722185 | MS.gene46399:intron | 35.0% | |
| TTGCTTACCCAAAAAGATAG+TGG | - | chr8.4:23724787-23724806 | None:intergenic | 35.0% | |
| TTTCTTTGGATTCATCGTTG+TGG | + | chr8.4:23722917-23722936 | MS.gene46399:CDS | 35.0% | |
| ! | AACAAAAGTGTGTGTAAAGG+CGG | - | chr8.4:23725127-23725146 | None:intergenic | 35.0% |
| ! | AGGAACAAAAGTGTGTGTAA+AGG | - | chr8.4:23725130-23725149 | None:intergenic | 35.0% |
| ! | ATTGGGGAACCTTATTTCAT+TGG | + | chr8.4:23722636-23722655 | MS.gene46399:intron | 35.0% |
| ! | CCTTAATATTGGTTGGAGTT+GGG | + | chr8.4:23724602-23724621 | MS.gene46399:CDS | 35.0% |
| ! | GAGCATATTCTTGTTGTACA+AGG | - | chr8.4:23725291-23725310 | None:intergenic | 35.0% |
| ! | GGAGAATTCTTGGGATATTT+TGG | + | chr8.4:23722176-23722195 | MS.gene46399:intron | 35.0% |
| ! | GTGTTCCATGTGATTTTCTT+TGG | + | chr8.4:23722903-23722922 | MS.gene46399:CDS | 35.0% |
| ! | TCCTTAATATTGGTTGGAGT+TGG | + | chr8.4:23724601-23724620 | MS.gene46399:CDS | 35.0% |
| ! | TCTCTTCTAGTTGCAATGTT+AGG | + | chr8.4:23724669-23724688 | MS.gene46399:CDS | 35.0% |
| ! | TGTACAAGGTTGTTGTTACA+AGG | - | chr8.4:23725277-23725296 | None:intergenic | 35.0% |
| ! | TTGGGGAACCTTATTTCATT+GGG | + | chr8.4:23722637-23722656 | MS.gene46399:intron | 35.0% |
| !! | CAATGGAAGTACCAAAAACT+TGG | + | chr8.4:23722950-23722969 | MS.gene46399:CDS | 35.0% |
| !! | GAATTCTTGGGATATTTTGG+TGG | + | chr8.4:23722179-23722198 | MS.gene46399:CDS | 35.0% |
| !! | TTCCACCTTAGTTTGTAAGT+TGG | - | chr8.4:23725536-23725555 | None:intergenic | 35.0% |
| !!! | ATTCTTGGGATATTTTGGTG+GGG | + | chr8.4:23722181-23722200 | MS.gene46399:CDS | 35.0% |
| !!! | CACAGTTTTTTTCCAACACA+TGG | + | chr8.4:23725249-23725268 | MS.gene46399:CDS | 35.0% |
| !!! | TTGGAAAGAGAGTGTTTTGA+GGG | - | chr8.4:23725386-23725405 | None:intergenic | 35.0% |
| AACCCACTATTCCAATAGGT+AGG | - | chr8.4:23723106-23723125 | None:intergenic | 40.0% | |
| AACTTCCACTCTCCATACAT+TGG | - | chr8.4:23722297-23722316 | None:intergenic | 40.0% | |
| ACCAAGAATTCAACCAAGTG+AGG | + | chr8.4:23721685-23721704 | MS.gene46399:CDS | 40.0% | |
| ACCCAAATTCTCAATCTCCT+CGG | - | chr8.4:23725479-23725498 | None:intergenic | 40.0% | |
| ACTGAACCCACTATTCCAAT+AGG | - | chr8.4:23723110-23723129 | None:intergenic | 40.0% | |
| ACTTCCACTCTCCATACATT+GGG | - | chr8.4:23722296-23722315 | None:intergenic | 40.0% | |
| ACTTGGTTGAATTCTTGGTC+TGG | - | chr8.4:23721684-23721703 | None:intergenic | 40.0% | |
| AGAACACCTCTAACACCATA+AGG | - | chr8.4:23722996-23723015 | None:intergenic | 40.0% | |
| AGCCTACCTATTGGAATAGT+GGG | + | chr8.4:23723101-23723120 | MS.gene46399:CDS | 40.0% | |
| AGGTGCAAGTTTAGGTATAG+TGG | + | chr8.4:23724644-23724663 | MS.gene46399:CDS | 40.0% | |
| ATACCTTTGTGTCATGGGAA+GGG | + | chr8.4:23724701-23724720 | MS.gene46399:CDS | 40.0% | |
| ATGACCATATAGCAAAGCGT+TGG | - | chr8.4:23725405-23725424 | None:intergenic | 40.0% | |
| CATGGAACACTGTCATAATG+AGG | - | chr8.4:23722893-23722912 | None:intergenic | 40.0% | |
| CCAATAGGTAGGCTCTTATA+AGG | - | chr8.4:23723095-23723114 | None:intergenic | 40.0% | |
| CCCAACTCCAACCAATATTA+AGG | - | chr8.4:23724605-23724624 | None:intergenic | 40.0% | |
| CCTTATAAGAGCCTACCTAT+TGG | + | chr8.4:23723092-23723111 | MS.gene46399:CDS | 40.0% | |
| CCTTATGCTTCTCCATAGTT+TGG | + | chr8.4:23725170-23725189 | MS.gene46399:CDS | 40.0% | |
| CTATGATTCAGCTTCAACCA+TGG | + | chr8.4:23723052-23723071 | MS.gene46399:CDS | 40.0% | |
| CTCTTCTGCAAAAGCTATTC+TGG | - | chr8.4:23724248-23724267 | None:intergenic | 40.0% | |
| GGAAATTCAAACAGCAATGG+TGG | + | chr8.4:23725191-23725210 | MS.gene46399:CDS | 40.0% | |
| TAATCCCAATGTATGGAGAG+TGG | + | chr8.4:23722289-23722308 | MS.gene46399:CDS | 40.0% | |
| TACCGTCGCTATGTAATCAT+CGG | + | chr8.4:23725094-23725113 | MS.gene46399:CDS | 40.0% | |
| TATGACACAAGCAAAGAGTG+AGG | - | chr8.4:23722379-23722398 | None:intergenic | 40.0% | |
| TCACTCTTTGCTTGTGTCAT+AGG | + | chr8.4:23722378-23722397 | MS.gene46399:CDS | 40.0% | |
| TGGTATGATCTTGTAGCTCT+TGG | + | chr8.4:23721744-23721763 | MS.gene46399:CDS | 40.0% | |
| TGGTGGGGCAAATATACTAA+TGG | + | chr8.4:23722196-23722215 | MS.gene46399:CDS | 40.0% | |
| TGTACTTTGGCTAACCAAGA+TGG | - | chr8.4:23724738-23724757 | None:intergenic | 40.0% | |
| TGTGACAGCTAACACAAACT+TGG | + | chr8.4:23722687-23722706 | MS.gene46399:intron | 40.0% | |
| TTGAGGAAGATGGACATTGA+AGG | - | chr8.4:23725346-23725365 | None:intergenic | 40.0% | |
| ! | ATAGCTCCTTATGGTGTTAG+AGG | + | chr8.4:23722987-23723006 | MS.gene46399:CDS | 40.0% |
| ! | ATTCTAGTTACGAGCCTGTT+TGG | - | chr8.4:23724364-23724383 | None:intergenic | 40.0% |
| ! | CCAAACTATGGAGAAGCATA+AGG | - | chr8.4:23725173-23725192 | None:intergenic | 40.0% |
| ! | CTTTCCAACGCTTTGCTATA+TGG | + | chr8.4:23725398-23725417 | MS.gene46399:CDS | 40.0% |
| ! | GGTCAAGAGTTACCAAGTTT+TGG | - | chr8.4:23723997-23724016 | None:intergenic | 40.0% |
| ! | GTGTGTGTTTGGTTCAACTT+TGG | + | chr8.4:23723478-23723497 | MS.gene46399:intron | 40.0% |
| ! | GTTGGTGTGTTTGTTACTAC+TGG | + | chr8.4:23721786-23721805 | MS.gene46399:CDS | 40.0% |
| ! | GTTGTGGCTGGTTATTACAA+TGG | + | chr8.4:23722933-23722952 | MS.gene46399:CDS | 40.0% |
| ! | TTTGGGTGGTGTTAATCAAG+TGG | + | chr8.4:23725492-23725511 | MS.gene46399:CDS | 40.0% |
| !! | TTGTCTTATCTTTGGGGTTC+CGG | + | chr8.4:23724872-23724891 | MS.gene46399:intron | 40.0% |
| !!! | GGATTTTGAAGTCTCTGCAA+CGG | - | chr8.4:23722567-23722586 | None:intergenic | 40.0% |
| !!! | GTTGGAAAGAGAGTGTTTTG+AGG | - | chr8.4:23725387-23725406 | None:intergenic | 40.0% |
| AAAGACGTGTCCAACACGTT+TGG | + | chr8.4:23722020-23722039 | MS.gene46399:intron | 45.0% | |
| AAGACGTGTCCAACACGTTT+GGG | + | chr8.4:23722021-23722040 | MS.gene46399:intron | 45.0% | |
| AAGTGAGGGAGAGAAGAAAG+AGG | - | chr8.4:23725150-23725169 | None:intergenic | 45.0% | |
| AATTCAACCAAGTGAGGCAG+AGG | + | chr8.4:23721691-23721710 | MS.gene46399:CDS | 45.0% | |
| AGAAGAATGAGAGCTACTGC+TGG | - | chr8.4:23722356-23722375 | None:intergenic | 45.0% | |
| AGCCAGATACCTTTGTGTCA+TGG | + | chr8.4:23724695-23724714 | MS.gene46399:CDS | 45.0% | |
| AGCCGAGGAGATTGAGAATT+TGG | + | chr8.4:23725474-23725493 | MS.gene46399:CDS | 45.0% | |
| AGGAAGATGGACATTGAAGG+TGG | - | chr8.4:23725343-23725362 | None:intergenic | 45.0% | |
| AGTTGGGCAAGCAACATTGT+TGG | + | chr8.4:23724618-23724637 | MS.gene46399:CDS | 45.0% | |
| CACGCTAATGGTGTTCTACA+TGG | + | chr8.4:23725054-23725073 | MS.gene46399:CDS | 45.0% | |
| CCAAAAGGGATAGCTCCTTA+TGG | + | chr8.4:23722978-23722997 | MS.gene46399:CDS | 45.0% | |
| CCAGATTGATGAAGAGCAAC+AGG | - | chr8.4:23721813-23721832 | None:intergenic | 45.0% | |
| CCTGTTGCTCTTCATCAATC+TGG | + | chr8.4:23721810-23721829 | MS.gene46399:CDS | 45.0% | |
| GAGCCTACCTATTGGAATAG+TGG | + | chr8.4:23723100-23723119 | MS.gene46399:CDS | 45.0% | |
| GAGGAGATTGAGAATTTGGG+TGG | + | chr8.4:23725478-23725497 | MS.gene46399:CDS | 45.0% | |
| GATACCTTTGTGTCATGGGA+AGG | + | chr8.4:23724700-23724719 | MS.gene46399:CDS | 45.0% | |
| GATCTTGTAGCTCTTGGAGT+TGG | + | chr8.4:23721750-23721769 | MS.gene46399:CDS | 45.0% | |
| GCCAAAGTACATCCTTCAAC+AGG | + | chr8.4:23724747-23724766 | MS.gene46399:CDS | 45.0% | |
| GCCAGATACCTTTGTGTCAT+GGG | + | chr8.4:23724696-23724715 | MS.gene46399:CDS | 45.0% | |
| GCCGAGGAGATTGAGAATTT+GGG | + | chr8.4:23725475-23725494 | MS.gene46399:CDS | 45.0% | |
| GCCTCACTTGGTTGAATTCT+TGG | - | chr8.4:23721689-23721708 | None:intergenic | 45.0% | |
| GCCTGTTGAAGGATGTACTT+TGG | - | chr8.4:23724751-23724770 | None:intergenic | 45.0% | |
| GGTCTGCAACCGCAATATAA+AGG | - | chr8.4:23722588-23722607 | None:intergenic | 45.0% | |
| GTATGGAGAGTGGAAGTTCA+TGG | + | chr8.4:23722299-23722318 | MS.gene46399:CDS | 45.0% | |
| TCACTCTACATATCAAGCCG+AGG | + | chr8.4:23725459-23725478 | MS.gene46399:CDS | 45.0% | |
| TCTCAAATGCTGCTGTAGCT+AGG | + | chr8.4:23722228-23722247 | MS.gene46399:CDS | 45.0% | |
| TGCACAAAGACAGAGCCATT+AGG | - | chr8.4:23723157-23723176 | None:intergenic | 45.0% | |
| TTTGGATTCATCGTTGTGGC+TGG | + | chr8.4:23722921-23722940 | MS.gene46399:CDS | 45.0% | |
| ! | CCATAAGGAGCTATCCCTTT+TGG | - | chr8.4:23722981-23723000 | None:intergenic | 45.0% |
| ! | GGAAGTTCATGGATTGCCAA+AGG | + | chr8.4:23722310-23722329 | MS.gene46399:CDS | 45.0% |
| ! | GGAGAAGCATAAGGAAGTGA+GGG | - | chr8.4:23725164-23725183 | None:intergenic | 45.0% |
| ! | GGGAACCTTATTTCATTGGG+TGG | + | chr8.4:23722640-23722659 | MS.gene46399:intron | 45.0% |
| ! | TGGAGAAGCATAAGGAAGTG+AGG | - | chr8.4:23725165-23725184 | None:intergenic | 45.0% |
| ! | TGTTACAAGGCACCATGTGT+TGG | - | chr8.4:23725264-23725283 | None:intergenic | 45.0% |
| ! | TTCAATGGAGTGCCTGTTGA+AGG | - | chr8.4:23724762-23724781 | None:intergenic | 45.0% |
| !! | GATTAGCATTGGCACGCTAA+TGG | + | chr8.4:23725042-23725061 | MS.gene46399:CDS | 45.0% |
| !! | GGTGTTAGAGGTGTTCTTGA+TGG | + | chr8.4:23722999-23723018 | MS.gene46399:CDS | 45.0% |
| !! | TCCCATGACACAAAGGTATC+TGG | - | chr8.4:23724700-23724719 | None:intergenic | 45.0% |
| !! | AATCAAAATATAAAATTTAA+TGG | + | chr8.4:23724177-23724196 | MS.gene46399:intron | 5.0% |
| !!! | ATATTTAAGTTAAATAATAA+TGG | + | chr8.4:23723914-23723933 | MS.gene46399:intron | 5.0% |
| ATGGACATTGAAGGTGGCCA+TGG | - | chr8.4:23725337-23725356 | None:intergenic | 50.0% | |
| CTGTCCAAACCCAAACGTGT+TGG | - | chr8.4:23722033-23722052 | None:intergenic | 50.0% | |
| CTTGGAGTTGGAGGAATGCT+TGG | + | chr8.4:23721762-23721781 | MS.gene46399:CDS | 50.0% | |
| CTTGTAGCTCTTGGAGTTGG+AGG | + | chr8.4:23721753-23721772 | MS.gene46399:CDS | 50.0% | |
| GCAAGCAACATTGTTGGAGC+AGG | + | chr8.4:23724624-23724643 | MS.gene46399:CDS | 50.0% | |
| GGCCGATGATTACATAGCGA+CGG | - | chr8.4:23725099-23725118 | None:intergenic | 50.0% | |
| GGCTCTGTCTTTGTGCATGA+TGG | + | chr8.4:23723160-23723179 | MS.gene46399:CDS | 50.0% | |
| GGTCTGGTGCAGACATGAAA+AGG | + | chr8.4:23721712-23721731 | MS.gene46399:CDS | 50.0% | |
| GTGTGTGTAAAGGCGGTGTA+TGG | - | chr8.4:23725120-23725139 | None:intergenic | 50.0% | |
| GTTGGAGCAGGTGCAAGTTT+AGG | + | chr8.4:23724636-23724655 | MS.gene46399:CDS | 50.0% | |
| TGGTGGGGTCTCTTACTCTT+CGG | + | chr8.4:23725208-23725227 | MS.gene46399:CDS | 50.0% | |
| TTCAGCTTCAACCATGGCTG+AGG | + | chr8.4:23723058-23723077 | MS.gene46399:CDS | 50.0% | |
| TTGCCCTTCCCATGACACAA+AGG | - | chr8.4:23724707-23724726 | None:intergenic | 50.0% | |
| TTTGTGTCATGGGAAGGGCA+AGG | + | chr8.4:23724706-23724725 | MS.gene46399:CDS | 50.0% | |
| ! | GCAGTTCAAGTTCCAGTTGC+TGG | + | chr8.4:23721906-23721925 | MS.gene46399:CDS | 50.0% |
| ! | GGTATGTGCCATTCATGCCA+TGG | + | chr8.4:23725317-23725336 | MS.gene46399:CDS | 50.0% |
| ! | GTGTCCAACACGTTTGGGTT+TGG | + | chr8.4:23722026-23722045 | MS.gene46399:intron | 50.0% |
| ! | GTTCAAGTTCCAGTTGCTGG+AGG | + | chr8.4:23721909-23721928 | MS.gene46399:CDS | 50.0% |
| !! | GTTGGAGGAATGCTTGGTGT+TGG | + | chr8.4:23721768-23721787 | MS.gene46399:CDS | 50.0% |
| AACCAAGTGAGGCAGAGGTC+TGG | + | chr8.4:23721696-23721715 | MS.gene46399:CDS | 55.0% | |
| AACCATGGCTGAGGAGGTCA+AGG | + | chr8.4:23723067-23723086 | MS.gene46399:CDS | 55.0% | |
| AGCTTCAACCATGGCTGAGG+AGG | + | chr8.4:23723061-23723080 | MS.gene46399:CDS | 55.0% | |
| ATCCTTGACCTCCTCAGCCA+TGG | - | chr8.4:23723072-23723091 | None:intergenic | 55.0% | |
| CTGAAAGCTCCTCCAGCAAC+TGG | - | chr8.4:23721921-23721940 | None:intergenic | 55.0% | |
| GAAGGTGGCCATGGCATGAA+TGG | - | chr8.4:23725328-23725347 | None:intergenic | 55.0% | |
| TGGGGTCTCTTACTCTTCGG+TGG | + | chr8.4:23725211-23725230 | MS.gene46399:CDS | 55.0% | |
| ! | GGGCAAGGCTTGTTCCATCT+TGG | + | chr8.4:23724721-23724740 | MS.gene46399:CDS | 55.0% |
| CACCAGACCTCTGCCTCACT+TGG | - | chr8.4:23721701-23721720 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 23721663 | 23725570 | 23721663 | ID=MS.gene46399 |
| chr8.4 | mRNA | 23721663 | 23725570 | 23721663 | ID=MS.gene46399.t1;Parent=MS.gene46399 |
| chr8.4 | exon | 23721663 | 23721960 | 23721663 | ID=MS.gene46399.t1.exon1;Parent=MS.gene46399.t1 |
| chr8.4 | CDS | 23721663 | 23721960 | 23721663 | ID=cds.MS.gene46399.t1;Parent=MS.gene46399.t1 |
| chr8.4 | exon | 23722177 | 23722399 | 23722177 | ID=MS.gene46399.t1.exon2;Parent=MS.gene46399.t1 |
| chr8.4 | CDS | 23722177 | 23722399 | 23722177 | ID=cds.MS.gene46399.t1;Parent=MS.gene46399.t1 |
| chr8.4 | exon | 23722866 | 23723196 | 23722866 | ID=MS.gene46399.t1.exon3;Parent=MS.gene46399.t1 |
| chr8.4 | CDS | 23722866 | 23723196 | 23722866 | ID=cds.MS.gene46399.t1;Parent=MS.gene46399.t1 |
| chr8.4 | exon | 23724570 | 23724798 | 23724570 | ID=MS.gene46399.t1.exon4;Parent=MS.gene46399.t1 |
| chr8.4 | CDS | 23724570 | 23724798 | 23724570 | ID=cds.MS.gene46399.t1;Parent=MS.gene46399.t1 |
| chr8.4 | exon | 23724987 | 23725570 | 23724987 | ID=MS.gene46399.t1.exon5;Parent=MS.gene46399.t1 |
| chr8.4 | CDS | 23724987 | 23725570 | 23724987 | ID=cds.MS.gene46399.t1;Parent=MS.gene46399.t1 |
| Gene Sequence |
| Protein sequence |
