Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054941.t1 | XP_003602589.1 | 98.9 | 178 | 2 | 0 | 1 | 178 | 1 | 178 | 4.50E-93 | 350.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054941.t1 | O49603 | 50.3 | 179 | 86 | 1 | 1 | 176 | 1 | 179 | 3.3e-44 | 179.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054941.t1 | G7JBI0 | 98.9 | 178 | 2 | 0 | 1 | 178 | 1 | 178 | 3.3e-93 | 350.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene054941 | 0.947716 | 3.91E-106 | -1.69E-46 |
| MS.gene050326 | MS.gene054941 | 0.802143 | 6.45E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene054941 | 0.828978 | 6.66E-55 | -1.69E-46 |
| MS.gene050707 | MS.gene054941 | 0.837197 | 5.99E-57 | -1.69E-46 |
| MS.gene050710 | MS.gene054941 | 0.805665 | 1.20E-49 | -1.69E-46 |
| MS.gene050875 | MS.gene054941 | 0.806832 | 6.79E-50 | -1.69E-46 |
| MS.gene051914 | MS.gene054941 | 0.81422 | 1.72E-51 | -1.69E-46 |
| MS.gene052169 | MS.gene054941 | 0.823462 | 1.37E-53 | -1.69E-46 |
| MS.gene052209 | MS.gene054941 | 0.828177 | 1.04E-54 | -1.69E-46 |
| MS.gene052308 | MS.gene054941 | 0.841662 | 4.15E-58 | -1.69E-46 |
| MS.gene053108 | MS.gene054941 | 0.803299 | 3.72E-49 | -1.69E-46 |
| MS.gene054551 | MS.gene054941 | 0.8224 | 2.42E-53 | -1.69E-46 |
| MS.gene054593 | MS.gene054941 | 0.813541 | 2.43E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene054941 | 0.803082 | 4.13E-49 | -1.69E-46 |
| MS.gene054662 | MS.gene054941 | 0.814905 | 1.21E-51 | -1.69E-46 |
| MS.gene054850 | MS.gene054941 | 0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene055308 | 0.812227 | 4.71E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene055578 | 0.809569 | 1.77E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene056387 | -0.854113 | 1.53E-61 | -1.69E-46 |
| MS.gene054941 | MS.gene056528 | 0.806078 | 9.80E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene05652 | 0.873346 | 1.58E-67 | -1.69E-46 |
| MS.gene054941 | MS.gene056618 | 0.846851 | 1.67E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene056697 | 0.808638 | 2.81E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene057101 | 0.817964 | 2.51E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene057356 | 0.809773 | 1.60E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene057367 | 0.822574 | 2.20E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene057669 | 0.866777 | 2.22E-65 | -1.69E-46 |
| MS.gene054941 | MS.gene057717 | 0.84869 | 5.22E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene058128 | 0.865976 | 3.99E-65 | -1.69E-46 |
| MS.gene054941 | MS.gene058853 | 0.8691 | 3.99E-66 | -1.69E-46 |
| MS.gene054941 | MS.gene05926 | 0.873057 | 1.97E-67 | -1.69E-46 |
| MS.gene054941 | MS.gene059616 | 0.864907 | 8.67E-65 | -1.69E-46 |
| MS.gene054941 | MS.gene059905 | 0.810614 | 1.06E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene060985 | 0.82347 | 1.36E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene061357 | 0.845195 | 4.73E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene061366 | 0.819877 | 9.22E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene063035 | 0.832083 | 1.16E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene063037 | 0.817058 | 4.02E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene063235 | 0.829536 | 4.87E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene063279 | 0.864418 | 1.23E-64 | -1.69E-46 |
| MS.gene054941 | MS.gene063280 | 0.85621 | 3.75E-62 | -1.69E-46 |
| MS.gene054941 | MS.gene063281 | 0.838962 | 2.11E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene063734 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene06421 | 0.999072 | 8.64E-289 | -1.69E-46 |
| MS.gene054941 | MS.gene064328 | 0.837055 | 6.51E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene064509 | 0.812214 | 4.74E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene065292 | 0.837067 | 6.47E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene065314 | 0.801606 | 8.32E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene066026 | 0.848523 | 5.81E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene066030 | -0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene066265 | 0.841448 | 4.72E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene067960 | 0.804033 | 2.62E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene069421 | 0.806933 | 6.47E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene070268 | 0.811934 | 5.46E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene070324 | 0.859091 | 5.26E-63 | -1.69E-46 |
| MS.gene054941 | MS.gene071308 | -0.810003 | 1.43E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene071403 | 0.802399 | 5.71E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene071405 | 0.829363 | 5.37E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene071422 | 0.829685 | 4.48E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene071713 | 0.827106 | 1.88E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene072074 | 0.81845 | 1.95E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene072255 | 0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene072366 | 0.840428 | 8.75E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene072434 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene073059 | 0.81434 | 1.62E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene073062 | 0.815993 | 6.95E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene073297 | 0.806999 | 6.26E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene074201 | 0.858333 | 8.86E-63 | -1.69E-46 |
| MS.gene054941 | MS.gene074291 | -0.802072 | 6.67E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene074380 | -0.846671 | 1.88E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene074515 | 0.885299 | 9.16E-72 | -1.69E-46 |
| MS.gene054941 | MS.gene08362 | 0.808733 | 2.68E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene09356 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene21274 | 0.803155 | 3.99E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene21734 | 0.861034 | 1.36E-63 | -1.69E-46 |
| MS.gene054941 | MS.gene21888 | 0.862988 | 3.43E-64 | -1.69E-46 |
| MS.gene054941 | MS.gene22759 | 0.838079 | 3.56E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene23050 | 0.817383 | 3.39E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene23416 | 0.84161 | 4.28E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene24720 | 0.817363 | 3.43E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene25516 | 0.80174 | 7.81E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene25726 | 0.85756 | 1.50E-62 | -1.69E-46 |
| MS.gene054941 | MS.gene25797 | 0.832403 | 9.65E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene26109 | 0.811119 | 8.21E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene26122 | 0.808376 | 3.19E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene26406 | 0.816072 | 6.68E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene26681 | 0.827832 | 1.26E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene27560 | 0.854733 | 1.01E-61 | -1.69E-46 |
| MS.gene054941 | MS.gene27771 | 0.828344 | 9.47E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene27811 | 0.834186 | 3.47E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene27812 | 0.831701 | 1.44E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene28077 | 0.809569 | 1.77E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene28137 | -0.816831 | 4.51E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene28158 | -0.837691 | 4.48E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene28288 | -0.813151 | 2.96E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene28334 | -0.862463 | 4.98E-64 | -1.69E-46 |
| MS.gene054941 | MS.gene28494 | -0.803603 | 3.22E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene28549 | 0.812262 | 4.63E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene28867 | 0.814872 | 1.23E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene28923 | 0.850138 | 2.06E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene29215 | 0.862812 | 3.89E-64 | -1.69E-46 |
| MS.gene054941 | MS.gene29395 | 0.811914 | 5.51E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene29927 | -0.808271 | 3.36E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene29939 | 0.836418 | 9.47E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene29940 | 0.831886 | 1.29E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene29942 | 0.841163 | 5.61E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene30743 | -0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene31165 | 0.803082 | 4.13E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene31917 | 0.847228 | 1.32E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene31973 | 0.856679 | 2.73E-62 | -1.69E-46 |
| MS.gene054941 | MS.gene32271 | -0.817468 | 3.25E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene32680 | 0.813251 | 2.81E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene33809 | 0.858011 | 1.10E-62 | -1.69E-46 |
| MS.gene054941 | MS.gene34503 | 0.817839 | 2.68E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene34573 | 0.81395 | 1.97E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene35777 | 0.824607 | 7.36E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene35794 | 0.863251 | 2.84E-64 | -1.69E-46 |
| MS.gene054941 | MS.gene35795 | 0.891158 | 5.13E-74 | -1.69E-46 |
| MS.gene054941 | MS.gene35853 | 0.889368 | 2.58E-73 | -1.69E-46 |
| MS.gene054941 | MS.gene35931 | 0.889737 | 1.85E-73 | -1.69E-46 |
| MS.gene054941 | MS.gene36778 | 0.845686 | 3.48E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene36820 | 0.841855 | 3.69E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene36957 | 0.854736 | 1.01E-61 | -1.69E-46 |
| MS.gene054941 | MS.gene36961 | 0.817547 | 3.12E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene37495 | 0.815373 | 9.56E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene38102 | 0.846802 | 1.73E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene38166 | 0.847089 | 1.44E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene38724 | 0.804067 | 2.58E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene39469 | 0.841996 | 3.39E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene39911 | 0.832305 | 1.02E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene40241 | 0.828537 | 8.51E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene40278 | 0.831316 | 1.79E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene40630 | 0.835156 | 1.98E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene40689 | 0.815905 | 7.28E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene40724 | 0.813575 | 2.39E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene41190 | 0.850782 | 1.36E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene43727 | 0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene43975 | 0.818573 | 1.83E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene44100 | 0.802168 | 6.38E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene44251 | 0.807827 | 4.18E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene44956 | 0.803185 | 3.93E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene45445 | 0.833854 | 4.20E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene46399 | 0.81545 | 9.19E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene46636 | 0.814634 | 1.39E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene46880 | -0.856599 | 2.89E-62 | -1.69E-46 |
| MS.gene054941 | MS.gene47007 | 0.805667 | 1.20E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene47664 | 0.803583 | 3.25E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene48428 | 0.802684 | 4.99E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene49165 | 0.85216 | 5.54E-61 | -1.69E-46 |
| MS.gene054941 | MS.gene49349 | 0.850036 | 2.20E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene49425 | 0.850004 | 2.25E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene50072 | 0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene054941 | MS.gene50073 | 0.816882 | 4.40E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene50449 | 0.800191 | 1.62E-48 | -1.69E-46 |
| MS.gene054941 | MS.gene50576 | 0.82848 | 8.78E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene51554 | 0.842082 | 3.21E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene52072 | 0.827744 | 1.32E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene52084 | 0.833386 | 5.49E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene52113 | 0.86774 | 1.09E-65 | -1.69E-46 |
| MS.gene054941 | MS.gene52363 | 0.821931 | 3.10E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene52403 | 0.844575 | 6.95E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene52976 | -0.80268 | 5.00E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene52980 | 0.851214 | 1.03E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene53366 | 0.836423 | 9.44E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene53408 | 0.838926 | 2.15E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene53966 | 0.801947 | 7.08E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene54855 | 0.84656 | 2.01E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene55329 | 0.823167 | 1.60E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene55407 | 0.802015 | 6.86E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene58165 | -0.80291 | 4.48E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene58835 | 0.81012 | 1.35E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene58849 | 0.805875 | 1.08E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene58948 | 0.808664 | 2.77E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene58949 | 0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene60041 | 0.832087 | 1.15E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene60269 | 0.8326 | 8.62E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene60853 | 0.824119 | 9.59E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene61081 | 0.833623 | 4.79E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene61094 | 0.843993 | 9.95E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene61684 | 0.843073 | 1.75E-58 | -1.69E-46 |
| MS.gene054941 | MS.gene61745 | 0.86485 | 9.04E-65 | -1.69E-46 |
| MS.gene054941 | MS.gene62884 | 0.824511 | 7.76E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene63011 | 0.80972 | 1.65E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene63012 | 0.806603 | 7.59E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene63320 | 0.814762 | 1.31E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene63469 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene65301 | 0.812996 | 3.20E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene65431 | 0.822397 | 2.42E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene66043 | 0.825108 | 5.61E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene66273 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene67555 | 0.804228 | 2.39E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene68142 | 0.800898 | 1.16E-48 | -1.69E-46 |
| MS.gene054941 | MS.gene68832 | 0.848951 | 4.42E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene69077 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene69607 | 0.851597 | 8.00E-61 | -1.69E-46 |
| MS.gene054941 | MS.gene69722 | 0.838482 | 2.80E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene70327 | -0.831596 | 1.53E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene70403 | 0.81608 | 6.65E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene70491 | 0.835104 | 2.04E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene70493 | 0.802528 | 5.37E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene71261 | 0.815263 | 1.01E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene71420 | -0.801415 | 9.10E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene71431 | 0.804188 | 2.44E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene72164 | 0.824139 | 9.49E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene72371 | 0.816856 | 4.46E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene72916 | -0.822952 | 1.80E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene72923 | 0.807453 | 5.02E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene73893 | 0.858424 | 8.32E-63 | -1.69E-46 |
| MS.gene054941 | MS.gene74548 | 0.815802 | 7.67E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene75179 | 0.877735 | 4.95E-69 | -1.69E-46 |
| MS.gene054941 | MS.gene75365 | 0.84864 | 5.39E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene75535 | 0.803004 | 4.29E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene75704 | 0.823993 | 1.03E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene75761 | 0.812533 | 4.04E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene75915 | 0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene75918 | 0.81962 | 1.06E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene76856 | 0.803814 | 2.91E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene77500 | 0.819257 | 1.28E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene77503 | 0.809888 | 1.51E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene77563 | 0.806032 | 1.00E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene77904 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene78250 | 0.801486 | 8.80E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene78560 | 0.8385 | 2.77E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene79461 | 0.86406 | 1.60E-64 | -1.69E-46 |
| MS.gene054941 | MS.gene79864 | 0.805447 | 1.33E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene80461 | 0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene054941 | MS.gene80899 | 0.891196 | 4.95E-74 | -1.69E-46 |
| MS.gene054941 | MS.gene82050 | -0.810228 | 1.28E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene87267 | 0.814054 | 1.87E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene87345 | 0.840033 | 1.11E-57 | -1.69E-46 |
| MS.gene054941 | MS.gene87666 | -0.81611 | 6.55E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene88464 | 0.825528 | 4.46E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene88616 | 0.844248 | 8.50E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene89090 | 0.808606 | 2.85E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene89653 | 0.830179 | 3.40E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene90842 | 0.895781 | 6.92E-76 | -1.69E-46 |
| MS.gene054941 | MS.gene90984 | 0.807251 | 5.54E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene91133 | 0.831074 | 2.05E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene91317 | 0.805369 | 1.38E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene91412 | 0.803871 | 2.84E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene91781 | 0.821745 | 3.43E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene91871 | 0.827046 | 1.94E-54 | -1.69E-46 |
| MS.gene054941 | MS.gene91968 | 0.822187 | 2.71E-53 | -1.69E-46 |
| MS.gene054941 | MS.gene92313 | 0.86844 | 6.52E-66 | -1.69E-46 |
| MS.gene054941 | MS.gene92996 | 0.81738 | 3.40E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene93058 | 0.818311 | 2.09E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene93105 | 0.849178 | 3.82E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene93738 | -0.834787 | 2.45E-56 | -1.69E-46 |
| MS.gene054941 | MS.gene93762 | 0.832105 | 1.14E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene94553 | 0.83139 | 1.72E-55 | -1.69E-46 |
| MS.gene054941 | MS.gene94954 | 0.889932 | 1.56E-73 | -1.69E-46 |
| MS.gene054941 | MS.gene95672 | 0.814545 | 1.46E-51 | -1.69E-46 |
| MS.gene054941 | MS.gene96335 | 0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene97993 | 0.803367 | 3.61E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene99603 | 0.804436 | 2.16E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene99885 | 0.85167 | 7.63E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054941.t1 | MTR_3g095980 | 98.876 | 178 | 2 | 0 | 1 | 178 | 1 | 178 | 9.36e-130 | 361 |
| MS.gene054941.t1 | MTR_4g122740 | 29.310 | 174 | 114 | 4 | 5 | 177 | 13 | 178 | 8.76e-17 | 74.3 |
| MS.gene054941.t1 | MTR_2g033630 | 32.335 | 167 | 106 | 5 | 12 | 176 | 15 | 176 | 5.18e-16 | 72.0 |
| MS.gene054941.t1 | MTR_4g122890 | 30.726 | 179 | 105 | 6 | 7 | 176 | 7 | 175 | 7.86e-15 | 68.9 |
| MS.gene054941.t1 | MTR_8g009300 | 26.012 | 173 | 116 | 6 | 13 | 177 | 13 | 181 | 4.72e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054941.t1 | AT5G64620 | 50.000 | 180 | 87 | 1 | 1 | 177 | 1 | 180 | 3.03e-63 | 193 |
| MS.gene054941.t1 | AT3G17220 | 27.879 | 165 | 114 | 3 | 12 | 176 | 14 | 173 | 2.24e-13 | 65.1 |
| MS.gene054941.t1 | AT4G15750 | 29.197 | 137 | 95 | 1 | 9 | 145 | 8 | 142 | 5.01e-13 | 64.3 |
| MS.gene054941.t1 | AT5G46930 | 28.313 | 166 | 104 | 6 | 5 | 161 | 1 | 160 | 3.87e-11 | 59.3 |
Find 39 sgRNAs with CRISPR-Local
Find 43 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACATAGATTGTAGTATT+TGG | 0.248640 | 3.1:+76448423 | None:intergenic |
| ATTCAAAAGGGTTCCTGATT+TGG | 0.274182 | 3.1:-76448104 | MS.gene054941:CDS |
| GAGCTTGCCACTAGAGAAAA+TGG | 0.275669 | 3.1:-76448070 | MS.gene054941:CDS |
| GCACACTATGCATTTGTAAA+TGG | 0.303461 | 3.1:-76448481 | MS.gene054941:CDS |
| CCAAGCTTCAGTACAAGATT+TGG | 0.336276 | 3.1:-76448200 | MS.gene054941:CDS |
| AGGCCCTTTGTGTCTGCGTT+TGG | 0.336742 | 3.1:+76448373 | None:intergenic |
| GGTTGGAGTAAGAGATTTAG+AGG | 0.338526 | 3.1:+76448291 | None:intergenic |
| CAACAACACTACCTTGAAAA+AGG | 0.368143 | 3.1:-76448269 | MS.gene054941:CDS |
| ACAAGCATTTGGGTAGTCTT+TGG | 0.377171 | 3.1:+76448135 | None:intergenic |
| ACTTATCTGCACACTCTTTG+AGG | 0.396879 | 3.1:+76448245 | None:intergenic |
| AATGCATTGTGACAAGCATT+TGG | 0.398656 | 3.1:+76448124 | None:intergenic |
| CTTGTCACAATGCATTCAAA+AGG | 0.421269 | 3.1:-76448117 | MS.gene054941:CDS |
| TCAGGAGGGTAAACCAAATC+AGG | 0.429293 | 3.1:+76448091 | None:intergenic |
| GCCTAGCTGTGATCATGGTT+GGG | 0.442882 | 3.1:-76448354 | MS.gene054941:CDS |
| TGCGTTTGGACTGCTAGGAT+TGG | 0.446964 | 3.1:+76448387 | None:intergenic |
| TTCAAGGTAGTGTTGTTGGT+TGG | 0.453115 | 3.1:+76448274 | None:intergenic |
| CCAAATCTTGTACTGAAGCT+TGG | 0.454754 | 3.1:+76448200 | None:intergenic |
| GTGTCTGCGTTTGGACTGCT+AGG | 0.461087 | 3.1:+76448382 | None:intergenic |
| GGCCTAGCTGTGATCATGGT+TGG | 0.485514 | 3.1:-76448355 | MS.gene054941:CDS |
| CATATATGTGATGTAGCTAT+GGG | 0.497869 | 3.1:-76448040 | MS.gene054941:CDS |
| ATGCATTGTGACAAGCATTT+GGG | 0.500606 | 3.1:+76448125 | None:intergenic |
| ACATATATGTGATGTAGCTA+TGG | 0.505961 | 3.1:-76448041 | MS.gene054941:CDS |
| GGATGAGAAATAGTGAGAAG+TGG | 0.509606 | 3.1:+76448512 | None:intergenic |
| TGATAATCTCATCAATATGT+AGG | 0.512388 | 3.1:-76448011 | None:intergenic |
| TTACAAATGCATAGTGTGCT+AGG | 0.521367 | 3.1:+76448485 | None:intergenic |
| AAAGGGCCTAGCTGTGATCA+TGG | 0.521391 | 3.1:-76448359 | MS.gene054941:CDS |
| GCTGTGATCATGGTTGGGAT+TGG | 0.523662 | 3.1:-76448349 | MS.gene054941:CDS |
| TCTCTAGTGGCAAGCTCAGG+AGG | 0.523727 | 3.1:+76448076 | None:intergenic |
| AATCTTGTACTGAAGCTTGG+AGG | 0.528434 | 3.1:+76448203 | None:intergenic |
| ATGCATAGTGTGCTAGGAAG+AGG | 0.536460 | 3.1:+76448491 | None:intergenic |
| AGTCCAAACGCAGACACAAA+GGG | 0.542036 | 3.1:-76448376 | MS.gene054941:CDS |
| ATCTTGTACTGAAGCTTGGA+GGG | 0.545648 | 3.1:+76448204 | None:intergenic |
| AGAGGACAAATATGAAGAAG+TGG | 0.553621 | 3.1:+76448309 | None:intergenic |
| TTGTCACAATGCATTCAAAA+GGG | 0.564017 | 3.1:-76448116 | MS.gene054941:CDS |
| CTCTAGTGGCAAGCTCAGGA+GGG | 0.593107 | 3.1:+76448077 | None:intergenic |
| CAGTCCAAACGCAGACACAA+AGG | 0.620929 | 3.1:-76448377 | MS.gene054941:CDS |
| TCCCAACCATGATCACAGCT+AGG | 0.662886 | 3.1:+76448353 | None:intergenic |
| GCAGATAAGTACAACTATGC+TGG | 0.666996 | 3.1:-76448232 | MS.gene054941:CDS |
| ATATATGTGATGTAGCTATG+GGG | 0.736245 | 3.1:-76448039 | MS.gene054941:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GAAACATAGATTGTAGTATT+TGG | + | chr3.1:76448118-76448137 | None:intergenic | 25.0% |
| ACATATATGTGATGTAGCTA+TGG | - | chr3.1:76448497-76448516 | MS.gene054941:CDS | 30.0% | |
| ATATATGTGATGTAGCTATG+GGG | - | chr3.1:76448499-76448518 | MS.gene054941:CDS | 30.0% | |
| CATATATGTGATGTAGCTAT+GGG | - | chr3.1:76448498-76448517 | MS.gene054941:CDS | 30.0% | |
| TTGTCACAATGCATTCAAAA+GGG | - | chr3.1:76448422-76448441 | MS.gene054941:CDS | 30.0% | |
| ! | TTTCAAACCATTTTCTCTAG+TGG | + | chr3.1:76448478-76448497 | None:intergenic | 30.0% |
| AATGCATTGTGACAAGCATT+TGG | + | chr3.1:76448417-76448436 | None:intergenic | 35.0% | |
| AGAGGACAAATATGAAGAAG+TGG | + | chr3.1:76448232-76448251 | None:intergenic | 35.0% | |
| ATGCATTGTGACAAGCATTT+GGG | + | chr3.1:76448416-76448435 | None:intergenic | 35.0% | |
| ATTCAAAAGGGTTCCTGATT+TGG | - | chr3.1:76448434-76448453 | MS.gene054941:CDS | 35.0% | |
| CAACAACACTACCTTGAAAA+AGG | - | chr3.1:76448269-76448288 | MS.gene054941:CDS | 35.0% | |
| CTTGTCACAATGCATTCAAA+AGG | - | chr3.1:76448421-76448440 | MS.gene054941:CDS | 35.0% | |
| GCACACTATGCATTTGTAAA+TGG | - | chr3.1:76448057-76448076 | MS.gene054941:CDS | 35.0% | |
| TTACAAATGCATAGTGTGCT+AGG | + | chr3.1:76448056-76448075 | None:intergenic | 35.0% | |
| !!! | CTTTTTCAAGGTAGTGTTGT+TGG | + | chr3.1:76448271-76448290 | None:intergenic | 35.0% |
| AATCTTGTACTGAAGCTTGG+AGG | + | chr3.1:76448338-76448357 | None:intergenic | 40.0% | |
| ACAAGCATTTGGGTAGTCTT+TGG | + | chr3.1:76448406-76448425 | None:intergenic | 40.0% | |
| ACTTATCTGCACACTCTTTG+AGG | + | chr3.1:76448296-76448315 | None:intergenic | 40.0% | |
| ATCTTGTACTGAAGCTTGGA+GGG | + | chr3.1:76448337-76448356 | None:intergenic | 40.0% | |
| CCAAATCTTGTACTGAAGCT+TGG | + | chr3.1:76448341-76448360 | None:intergenic | 40.0% | |
| CCAAGCTTCAGTACAAGATT+TGG | - | chr3.1:76448338-76448357 | MS.gene054941:CDS | 40.0% | |
| GCAGATAAGTACAACTATGC+TGG | - | chr3.1:76448306-76448325 | MS.gene054941:CDS | 40.0% | |
| GGATGAGAAATAGTGAGAAG+TGG | + | chr3.1:76448029-76448048 | None:intergenic | 40.0% | |
| GGTTGGAGTAAGAGATTTAG+AGG | + | chr3.1:76448250-76448269 | None:intergenic | 40.0% | |
| ! | GCAAGTGCTTTTGATCAAAG+TGG | + | chr3.1:76448088-76448107 | None:intergenic | 40.0% |
| ! | TTCAAGGTAGTGTTGTTGGT+TGG | + | chr3.1:76448267-76448286 | None:intergenic | 40.0% |
| !! | CTCTTTGAGGACCTTTTTCA+AGG | + | chr3.1:76448283-76448302 | None:intergenic | 40.0% |
| AGTCCAAACGCAGACACAAA+GGG | - | chr3.1:76448162-76448181 | MS.gene054941:CDS | 45.0% | |
| ATGCATAGTGTGCTAGGAAG+AGG | + | chr3.1:76448050-76448069 | None:intergenic | 45.0% | |
| GAGCTTGCCACTAGAGAAAA+TGG | - | chr3.1:76448468-76448487 | MS.gene054941:CDS | 45.0% | |
| TCAGGAGGGTAAACCAAATC+AGG | + | chr3.1:76448450-76448469 | None:intergenic | 45.0% | |
| ! | TTTTCTCTAGTGGCAAGCTC+AGG | + | chr3.1:76448468-76448487 | None:intergenic | 45.0% |
| AAAGGGCCTAGCTGTGATCA+TGG | - | chr3.1:76448179-76448198 | MS.gene054941:CDS | 50.0% | |
| CAGTCCAAACGCAGACACAA+AGG | - | chr3.1:76448161-76448180 | MS.gene054941:CDS | 50.0% | |
| GCCTAGCTGTGATCATGGTT+GGG | - | chr3.1:76448184-76448203 | MS.gene054941:CDS | 50.0% | |
| GCTGTGATCATGGTTGGGAT+TGG | - | chr3.1:76448189-76448208 | MS.gene054941:CDS | 50.0% | |
| TCCCAACCATGATCACAGCT+AGG | + | chr3.1:76448188-76448207 | None:intergenic | 50.0% | |
| TGCGTTTGGACTGCTAGGAT+TGG | + | chr3.1:76448154-76448173 | None:intergenic | 50.0% | |
| AGGCCCTTTGTGTCTGCGTT+TGG | + | chr3.1:76448168-76448187 | None:intergenic | 55.0% | |
| CTCTAGTGGCAAGCTCAGGA+GGG | + | chr3.1:76448464-76448483 | None:intergenic | 55.0% | |
| GGCCTAGCTGTGATCATGGT+TGG | - | chr3.1:76448183-76448202 | MS.gene054941:CDS | 55.0% | |
| GTGTCTGCGTTTGGACTGCT+AGG | + | chr3.1:76448159-76448178 | None:intergenic | 55.0% | |
| TCTCTAGTGGCAAGCTCAGG+AGG | + | chr3.1:76448465-76448484 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 76448012 | 76448548 | 76448012 | ID=MS.gene054941 |
| chr3.1 | mRNA | 76448012 | 76448548 | 76448012 | ID=MS.gene054941.t1;Parent=MS.gene054941 |
| chr3.1 | exon | 76448012 | 76448548 | 76448012 | ID=MS.gene054941.t1.exon1;Parent=MS.gene054941.t1 |
| chr3.1 | CDS | 76448012 | 76448548 | 76448012 | ID=cds.MS.gene054941.t1;Parent=MS.gene054941.t1 |
| Gene Sequence |
| Protein sequence |
