Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47020.t1 | AFK45112.1 | 96 | 346 | 13 | 1 | 1 | 346 | 1 | 345 | 1.10E-175 | 625.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47020.t1 | Q84L08 | 78.0 | 304 | 67 | 0 | 2 | 305 | 3 | 306 | 2.0e-125 | 450.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47020.t1 | G7JU76 | 96.0 | 346 | 13 | 1 | 1 | 346 | 1 | 345 | 7.8e-176 | 625.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99882 | MS.gene47020 | PPI |
| MS.gene47020 | MS.gene007969 | PPI |
| MS.gene031892 | MS.gene47020 | PPI |
| MS.gene039961 | MS.gene47020 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47020.t1 | MTR_4g113270 | 98.266 | 346 | 5 | 1 | 1 | 346 | 1 | 345 | 0.0 | 676 |
| MS.gene47020.t1 | MTR_4g113270 | 98.235 | 340 | 5 | 1 | 1 | 340 | 1 | 339 | 0.0 | 665 |
| MS.gene47020.t1 | MTR_1g100860 | 47.788 | 339 | 158 | 4 | 15 | 340 | 41 | 373 | 5.73e-98 | 295 |
| MS.gene47020.t1 | MTR_4g018770 | 47.198 | 339 | 160 | 4 | 15 | 340 | 35 | 367 | 8.72e-98 | 294 |
| MS.gene47020.t1 | MTR_1g100860 | 46.739 | 276 | 130 | 4 | 77 | 340 | 5 | 275 | 4.57e-76 | 235 |
| MS.gene47020.t1 | MTR_4g018770 | 46.570 | 277 | 129 | 4 | 77 | 340 | 5 | 275 | 6.75e-76 | 235 |
| MS.gene47020.t1 | MTR_3g463360 | 24.242 | 297 | 206 | 6 | 19 | 304 | 108 | 396 | 9.01e-13 | 69.3 |
| MS.gene47020.t1 | MTR_3g109070 | 27.692 | 260 | 164 | 7 | 18 | 267 | 20 | 265 | 2.14e-12 | 67.4 |
| MS.gene47020.t1 | MTR_3g109070 | 27.692 | 260 | 164 | 7 | 18 | 267 | 20 | 265 | 3.48e-12 | 66.2 |
| MS.gene47020.t1 | MTR_3g096310 | 23.102 | 303 | 218 | 5 | 18 | 311 | 45 | 341 | 6.48e-12 | 66.2 |
| MS.gene47020.t1 | MTR_3g109070 | 28.218 | 202 | 126 | 5 | 18 | 210 | 20 | 211 | 2.80e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47020.t1 | AT5G19980 | 71.304 | 345 | 92 | 2 | 2 | 346 | 3 | 340 | 6.17e-169 | 474 |
| MS.gene47020.t1 | AT1G76340 | 48.615 | 325 | 161 | 3 | 15 | 337 | 37 | 357 | 9.10e-101 | 302 |
| MS.gene47020.t1 | AT4G31600 | 26.848 | 257 | 170 | 5 | 18 | 267 | 19 | 264 | 3.66e-13 | 69.7 |
| MS.gene47020.t1 | AT2G13650 | 22.896 | 297 | 212 | 5 | 18 | 304 | 38 | 327 | 8.51e-12 | 65.9 |
| MS.gene47020.t1 | AT2G13650 | 22.896 | 297 | 212 | 5 | 18 | 304 | 38 | 327 | 8.51e-12 | 65.9 |
| MS.gene47020.t1 | AT4G31600 | 27.136 | 199 | 132 | 3 | 18 | 210 | 19 | 210 | 1.26e-11 | 65.1 |
Find 65 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGGTTGTTATTCTTGC+TGG | 0.233454 | 8.4:+15121696 | MS.gene47020:CDS |
| GCTACCGCGTTTACCGTTAC+TGG | 0.269983 | 8.4:+15122062 | MS.gene47020:CDS |
| GGTTTGTTGATTAGTTTCTT+TGG | 0.270396 | 8.4:+15122014 | MS.gene47020:CDS |
| GAAACCCTAATTTACCTAAA+AGG | 0.287655 | 8.4:-15121464 | None:intergenic |
| TTACACTCACGGCTTATTCT+TGG | 0.301434 | 8.4:+15121751 | MS.gene47020:CDS |
| TGAGTCTTGGGTTGAATACT+TGG | 0.340183 | 8.4:+15121832 | MS.gene47020:CDS |
| AATAACAACCAAGGACAAAA+AGG | 0.342091 | 8.4:-15121688 | None:intergenic |
| TACACTCACGGCTTATTCTT+GGG | 0.343245 | 8.4:+15121752 | MS.gene47020:CDS |
| GGTTATGTTGCTACTGATTC+CGG | 0.348332 | 8.4:+15121726 | MS.gene47020:CDS |
| CTACCGCGTTTACCGTTACT+GGG | 0.359242 | 8.4:+15122063 | MS.gene47020:CDS |
| TGGCAATTAATGTGACGATT+TGG | 0.360897 | 8.4:+15122108 | MS.gene47020:CDS |
| GTTTCGTTGTCTTGTGTGTT+TGG | 0.368137 | 8.4:+15121993 | MS.gene47020:CDS |
| GATGGTTTATATTAAGCATA+TGG | 0.374607 | 8.4:+15121806 | MS.gene47020:CDS |
| GCATGCTAGTCCAGCTGGTT+TGG | 0.378044 | 8.4:+15122136 | MS.gene47020:CDS |
| CAGCAATCGGTGACTGGAAA+TGG | 0.381275 | 8.4:+15122197 | MS.gene47020:CDS |
| AAGCATATGGTTATGAGTCT+TGG | 0.383947 | 8.4:+15121819 | MS.gene47020:CDS |
| AGCATATGGTTATGAGTCTT+GGG | 0.397212 | 8.4:+15121820 | MS.gene47020:CDS |
| GGCAATTAATGTGACGATTT+GGG | 0.402674 | 8.4:+15122109 | MS.gene47020:CDS |
| GTTATTCTTGCTGGTGCTGT+TGG | 0.419854 | 8.4:+15121705 | MS.gene47020:CDS |
| GACTGGAAATGGTTCGCAAC+AGG | 0.428349 | 8.4:+15122208 | MS.gene47020:CDS |
| GATGTTGAAAGTAGTCTTGT+TGG | 0.433983 | 8.4:+15122257 | MS.gene47020:CDS |
| GCCACAAGTGGCTTAGTAAT+CGG | 0.437849 | 8.4:+15121327 | MS.gene47020:CDS |
| GGGAAGAATTTCTTAGCGAT+TGG | 0.443284 | 8.4:-15121510 | None:intergenic |
| AAGAAGAAAACGAGTGCTGC+AGG | 0.450306 | 8.4:-15121531 | None:intergenic |
| GAGTCTTGGGTTGAATACTT+GGG | 0.451840 | 8.4:+15121833 | MS.gene47020:CDS |
| CTTTATCAGCAATCGGTGAC+TGG | 0.470901 | 8.4:+15122191 | MS.gene47020:CDS |
| GGGTGTTCTTTATCAGCAAT+CGG | 0.471127 | 8.4:+15122184 | MS.gene47020:CDS |
| TGGTTCGCAACAGGCGGTTG+TGG | 0.475038 | 8.4:+15122217 | MS.gene47020:CDS |
| GTTAGCGTGACGAAGGAGAT+TGG | 0.477146 | 8.4:-15121571 | None:intergenic |
| TGAAGAAGTGAGATATTGTA+AGG | 0.495489 | 8.4:-15121430 | None:intergenic |
| ATAAGCCGTGAGTGTAAAAC+CGG | 0.495535 | 8.4:-15121745 | None:intergenic |
| ACTGCCTTGAGATCGAGTAC+TGG | 0.496102 | 8.4:+15121939 | MS.gene47020:CDS |
| TGTAAGGCTGTTAAAAGACC+TGG | 0.499578 | 8.4:-15121414 | None:intergenic |
| CAATATCTCACTTCTTCACT+CGG | 0.505402 | 8.4:+15121435 | MS.gene47020:CDS |
| CTGCCTTGAGATCGAGTACT+GGG | 0.507997 | 8.4:+15121940 | MS.gene47020:CDS |
| AGTCTTGGGTTGAATACTTG+GGG | 0.509311 | 8.4:+15121834 | MS.gene47020:CDS |
| GATAAGCATGCTAGTCCAGC+TGG | 0.512847 | 8.4:+15122131 | MS.gene47020:CDS |
| TGAAGATGAGAGTGAAGGAA+AGG | 0.515215 | 8.4:+15122292 | MS.gene47020:CDS |
| CTCGCTGATACTGCGTTTCG+CGG | 0.516331 | 8.4:+15121642 | MS.gene47020:CDS |
| ATAAACCATCTCAGTAGTAA+TGG | 0.529935 | 8.4:-15121793 | None:intergenic |
| GAAGATGAGAGTGAAGGAAA+GGG | 0.531374 | 8.4:+15122293 | MS.gene47020:CDS |
| AGCAAACAAACCAAACCAGC+TGG | 0.537823 | 8.4:-15122146 | None:intergenic |
| TTAGCGATTGGAATAGTGAA+AGG | 0.542673 | 8.4:-15121498 | None:intergenic |
| GGTTACCATTACTACTGAGA+TGG | 0.551400 | 8.4:+15121788 | MS.gene47020:CDS |
| CAGCGAGAGCAACAAGAAGA+GGG | 0.556974 | 8.4:-15121626 | None:intergenic |
| TCAGCGAGAGCAACAAGAAG+AGG | 0.569697 | 8.4:-15121627 | None:intergenic |
| CAACAACACTACGCCACAAG+TGG | 0.587960 | 8.4:+15121315 | MS.gene47020:CDS |
| GAAAGTAGTCTTGTTGGTGA+TGG | 0.589182 | 8.4:+15122263 | MS.gene47020:CDS |
| ACCAGCAAGAATAACAACCA+AGG | 0.595444 | 8.4:-15121697 | None:intergenic |
| AAGGTAAAATTAGACGGAGA+GGG | 0.604146 | 8.4:-15121669 | None:intergenic |
| CTTATTCACAACCCCAGTAA+CGG | 0.607538 | 8.4:-15122075 | None:intergenic |
| GTAAGGCTGTTAAAAGACCT+GGG | 0.614797 | 8.4:-15121413 | None:intergenic |
| AAAGGTAAAATTAGACGGAG+AGG | 0.624222 | 8.4:-15121670 | None:intergenic |
| GTGACGAAGGAGATTGGTGT+TGG | 0.632002 | 8.4:-15121565 | None:intergenic |
| ACTCCCAGTACTCGATCTCA+AGG | 0.635928 | 8.4:-15121943 | None:intergenic |
| ACCGATTACTAAGCCACTTG+TGG | 0.637733 | 8.4:-15121328 | None:intergenic |
| TATCAACGTTAGCGTGACGA+AGG | 0.639770 | 8.4:-15121578 | None:intergenic |
| TGGAAATGGTTCGCAACAGG+CGG | 0.646327 | 8.4:+15122211 | MS.gene47020:CDS |
| ATTACTCAATTCAACTACCC+AGG | 0.649152 | 8.4:+15121396 | MS.gene47020:CDS |
| AGAAGAAAACGAGTGCTGCA+GGG | 0.656660 | 8.4:-15121530 | None:intergenic |
| AGCGAGAGCAACAAGAAGAG+GGG | 0.662395 | 8.4:-15121625 | None:intergenic |
| TGTGAATAAGTTTCTGACTG+TGG | 0.688581 | 8.4:+15122088 | MS.gene47020:CDS |
| GAATCTGAAGATGAGAGTGA+AGG | 0.699145 | 8.4:+15122287 | MS.gene47020:CDS |
| TACCGCGTTTACCGTTACTG+GGG | 0.705827 | 8.4:+15122064 | MS.gene47020:CDS |
| AACCCCAGTAACGGTAAACG+CGG | 0.739549 | 8.4:-15122066 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACCTTTTAGGTAAATTA+GGG | + | chr8.4:15121460-15121479 | MS.gene47020:CDS | 20.0% |
| ! | GACAAAAAGGTAAAATTAGA+CGG | - | chr8.4:15121678-15121697 | None:intergenic | 25.0% |
| ! | GATGGTTTATATTAAGCATA+TGG | + | chr8.4:15121806-15121825 | MS.gene47020:CDS | 25.0% |
| !! | TAATTTTACCTTTTTGTCCT+TGG | + | chr8.4:15121680-15121699 | MS.gene47020:CDS | 25.0% |
| !!! | GTTTACCTTTTAGGTAAATT+AGG | + | chr8.4:15121459-15121478 | MS.gene47020:CDS | 25.0% |
| !!! | GTTTGCTTTTTACGATTATT+GGG | + | chr8.4:15122162-15122181 | MS.gene47020:CDS | 25.0% |
| !!! | TGTTTGCTTTTTACGATTAT+TGG | + | chr8.4:15122161-15122180 | MS.gene47020:CDS | 25.0% |
| !!! | TTTGCTTTTTACGATTATTG+GGG | + | chr8.4:15122163-15122182 | MS.gene47020:CDS | 25.0% |
| AATAACAACCAAGGACAAAA+AGG | - | chr8.4:15121691-15121710 | None:intergenic | 30.0% | |
| ATAAACCATCTCAGTAGTAA+TGG | - | chr8.4:15121796-15121815 | None:intergenic | 30.0% | |
| GAAACCCTAATTTACCTAAA+AGG | - | chr8.4:15121467-15121486 | None:intergenic | 30.0% | |
| TGAAGAAGTGAGATATTGTA+AGG | - | chr8.4:15121433-15121452 | None:intergenic | 30.0% | |
| !! | GGTTTGTTGATTAGTTTCTT+TGG | + | chr8.4:15122014-15122033 | MS.gene47020:CDS | 30.0% |
| !!! | TTGCTTTTTACGATTATTGG+GGG | + | chr8.4:15122164-15122183 | MS.gene47020:CDS | 30.0% |
| AAAGGTAAAATTAGACGGAG+AGG | - | chr8.4:15121673-15121692 | None:intergenic | 35.0% | |
| AAGCATATGGTTATGAGTCT+TGG | + | chr8.4:15121819-15121838 | MS.gene47020:CDS | 35.0% | |
| AAGGTAAAATTAGACGGAGA+GGG | - | chr8.4:15121672-15121691 | None:intergenic | 35.0% | |
| AGCATATGGTTATGAGTCTT+GGG | + | chr8.4:15121820-15121839 | MS.gene47020:CDS | 35.0% | |
| ATTACTCAATTCAACTACCC+AGG | + | chr8.4:15121396-15121415 | MS.gene47020:CDS | 35.0% | |
| CAATATCTCACTTCTTCACT+CGG | + | chr8.4:15121435-15121454 | MS.gene47020:CDS | 35.0% | |
| CCAGTCAAAAACCAAAAAAC+AGG | - | chr8.4:15121900-15121919 | None:intergenic | 35.0% | |
| GGCAATTAATGTGACGATTT+GGG | + | chr8.4:15122109-15122128 | MS.gene47020:CDS | 35.0% | |
| TGGCAATTAATGTGACGATT+TGG | + | chr8.4:15122108-15122127 | MS.gene47020:CDS | 35.0% | |
| TGTGAATAAGTTTCTGACTG+TGG | + | chr8.4:15122088-15122107 | MS.gene47020:CDS | 35.0% | |
| TTAGCGATTGGAATAGTGAA+AGG | - | chr8.4:15121501-15121520 | None:intergenic | 35.0% | |
| ! | TTCTTGGGCTTTTGCTTATT+TGG | + | chr8.4:15121767-15121786 | MS.gene47020:CDS | 35.0% |
| ! | TTTGACTGGTGAGAATTTTG+AGG | + | chr8.4:15121911-15121930 | MS.gene47020:CDS | 35.0% |
| !! | GATGTTGAAAGTAGTCTTGT+TGG | + | chr8.4:15122257-15122276 | MS.gene47020:CDS | 35.0% |
| !!! | CCTGTTTTTTGGTTTTTGAC+TGG | + | chr8.4:15121897-15121916 | MS.gene47020:CDS | 35.0% |
| !!! | TGATGATTGCTCCTGTTTTT+TGG | + | chr8.4:15121886-15121905 | MS.gene47020:CDS | 35.0% |
| ACCAGCAAGAATAACAACCA+AGG | - | chr8.4:15121700-15121719 | None:intergenic | 40.0% | |
| ATAAGCCGTGAGTGTAAAAC+CGG | - | chr8.4:15121748-15121767 | None:intergenic | 40.0% | |
| CTTATTCACAACCCCAGTAA+CGG | - | chr8.4:15122078-15122097 | None:intergenic | 40.0% | |
| GAAGATGAGAGTGAAGGAAA+GGG | + | chr8.4:15122293-15122312 | MS.gene47020:CDS | 40.0% | |
| GAATCTGAAGATGAGAGTGA+AGG | + | chr8.4:15122287-15122306 | MS.gene47020:CDS | 40.0% | |
| GGGAAGAATTTCTTAGCGAT+TGG | - | chr8.4:15121513-15121532 | None:intergenic | 40.0% | |
| GGGTGTTCTTTATCAGCAAT+CGG | + | chr8.4:15122184-15122203 | MS.gene47020:CDS | 40.0% | |
| GGTTACCATTACTACTGAGA+TGG | + | chr8.4:15121788-15121807 | MS.gene47020:CDS | 40.0% | |
| GTAAGGCTGTTAAAAGACCT+GGG | - | chr8.4:15121416-15121435 | None:intergenic | 40.0% | |
| GTTTCGTTGTCTTGTGTGTT+TGG | + | chr8.4:15121993-15122012 | MS.gene47020:CDS | 40.0% | |
| TACACTCACGGCTTATTCTT+GGG | + | chr8.4:15121752-15121771 | MS.gene47020:CDS | 40.0% | |
| TGAAGATGAGAGTGAAGGAA+AGG | + | chr8.4:15122292-15122311 | MS.gene47020:CDS | 40.0% | |
| TGTAAGGCTGTTAAAAGACC+TGG | - | chr8.4:15121417-15121436 | None:intergenic | 40.0% | |
| TTACACTCACGGCTTATTCT+TGG | + | chr8.4:15121751-15121770 | MS.gene47020:CDS | 40.0% | |
| ! | GTTCGATGTGAATGCGTTTT+TGG | + | chr8.4:15121968-15121987 | MS.gene47020:CDS | 40.0% |
| ! | TCCTTGGTTGTTATTCTTGC+TGG | + | chr8.4:15121696-15121715 | MS.gene47020:CDS | 40.0% |
| ! | TGATTCCGGTTTTACACTCA+CGG | + | chr8.4:15121740-15121759 | MS.gene47020:CDS | 40.0% |
| !! | AGTCTTGGGTTGAATACTTG+GGG | + | chr8.4:15121834-15121853 | MS.gene47020:CDS | 40.0% |
| !! | GAAAGTAGTCTTGTTGGTGA+TGG | + | chr8.4:15122263-15122282 | MS.gene47020:CDS | 40.0% |
| !! | GAGTCTTGGGTTGAATACTT+GGG | + | chr8.4:15121833-15121852 | MS.gene47020:CDS | 40.0% |
| !! | GGTTATGTTGCTACTGATTC+CGG | + | chr8.4:15121726-15121745 | MS.gene47020:CDS | 40.0% |
| !! | TGAGTCTTGGGTTGAATACT+TGG | + | chr8.4:15121832-15121851 | MS.gene47020:CDS | 40.0% |
| !!! | TCACTCGGTGTTTACCTTTT+AGG | + | chr8.4:15121450-15121469 | MS.gene47020:CDS | 40.0% |
| ACCGATTACTAAGCCACTTG+TGG | - | chr8.4:15121331-15121350 | None:intergenic | 45.0% | |
| AGCAAACAAACCAAACCAGC+TGG | - | chr8.4:15122149-15122168 | None:intergenic | 45.0% | |
| CTTTATCAGCAATCGGTGAC+TGG | + | chr8.4:15122191-15122210 | MS.gene47020:CDS | 45.0% | |
| GCCACAAGTGGCTTAGTAAT+CGG | + | chr8.4:15121327-15121346 | MS.gene47020:CDS | 45.0% | |
| TATCAACGTTAGCGTGACGA+AGG | - | chr8.4:15121581-15121600 | None:intergenic | 45.0% | |
| ! | AAGAAGAAAACGAGTGCTGC+AGG | - | chr8.4:15121534-15121553 | None:intergenic | 45.0% |
| ! | AGAAGAAAACGAGTGCTGCA+GGG | - | chr8.4:15121533-15121552 | None:intergenic | 45.0% |
| !! | CGATGTGAATGCGTTTTTGG+CGG | + | chr8.4:15121971-15121990 | MS.gene47020:CDS | 45.0% |
| !! | GTTATTCTTGCTGGTGCTGT+TGG | + | chr8.4:15121705-15121724 | MS.gene47020:CDS | 45.0% |
| AACCCCAGTAACGGTAAACG+CGG | - | chr8.4:15122069-15122088 | None:intergenic | 50.0% | |
| ACTCCCAGTACTCGATCTCA+AGG | - | chr8.4:15121946-15121965 | None:intergenic | 50.0% | |
| ACTGCCTTGAGATCGAGTAC+TGG | + | chr8.4:15121939-15121958 | MS.gene47020:CDS | 50.0% | |
| AGCGAGAGCAACAAGAAGAG+GGG | - | chr8.4:15121628-15121647 | None:intergenic | 50.0% | |
| CAACAACACTACGCCACAAG+TGG | + | chr8.4:15121315-15121334 | MS.gene47020:CDS | 50.0% | |
| CAGCAATCGGTGACTGGAAA+TGG | + | chr8.4:15122197-15122216 | MS.gene47020:CDS | 50.0% | |
| CAGCGAGAGCAACAAGAAGA+GGG | - | chr8.4:15121629-15121648 | None:intergenic | 50.0% | |
| CTACCGCGTTTACCGTTACT+GGG | + | chr8.4:15122063-15122082 | MS.gene47020:CDS | 50.0% | |
| CTGCCTTGAGATCGAGTACT+GGG | + | chr8.4:15121940-15121959 | MS.gene47020:CDS | 50.0% | |
| GACTGGAAATGGTTCGCAAC+AGG | + | chr8.4:15122208-15122227 | MS.gene47020:CDS | 50.0% | |
| GATAAGCATGCTAGTCCAGC+TGG | + | chr8.4:15122131-15122150 | MS.gene47020:CDS | 50.0% | |
| GTGACGAAGGAGATTGGTGT+TGG | - | chr8.4:15121568-15121587 | None:intergenic | 50.0% | |
| GTTAGCGTGACGAAGGAGAT+TGG | - | chr8.4:15121574-15121593 | None:intergenic | 50.0% | |
| TACCGCGTTTACCGTTACTG+GGG | + | chr8.4:15122064-15122083 | MS.gene47020:CDS | 50.0% | |
| TCAGCGAGAGCAACAAGAAG+AGG | - | chr8.4:15121630-15121649 | None:intergenic | 50.0% | |
| TGGAAATGGTTCGCAACAGG+CGG | + | chr8.4:15122211-15122230 | MS.gene47020:CDS | 50.0% | |
| CTCGCTGATACTGCGTTTCG+CGG | + | chr8.4:15121642-15121661 | MS.gene47020:CDS | 55.0% | |
| GCATGCTAGTCCAGCTGGTT+TGG | + | chr8.4:15122136-15122155 | MS.gene47020:CDS | 55.0% | |
| GCTACCGCGTTTACCGTTAC+TGG | + | chr8.4:15122062-15122081 | MS.gene47020:CDS | 55.0% | |
| TGGTTCGCAACAGGCGGTTG+TGG | + | chr8.4:15122217-15122236 | MS.gene47020:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 15121294 | 15122334 | 15121294 | ID=MS.gene47020 |
| chr8.4 | mRNA | 15121294 | 15122334 | 15121294 | ID=MS.gene47020.t1;Parent=MS.gene47020 |
| chr8.4 | exon | 15121294 | 15122334 | 15121294 | ID=MS.gene47020.t1.exon1;Parent=MS.gene47020.t1 |
| chr8.4 | CDS | 15121294 | 15122334 | 15121294 | ID=cds.MS.gene47020.t1;Parent=MS.gene47020.t1 |
| Gene Sequence |
| Protein sequence |
