Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47075.t1 | XP_013451351.1 | 86.8 | 584 | 63 | 3 | 1 | 582 | 1 | 572 | 3.10E-215 | 758.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47075.t1 | Q67Y69 | 61.8 | 55 | 19 | 1 | 21 | 75 | 12 | 64 | 6.7e-09 | 63.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47075.t1 | A0A072U7R9 | 86.8 | 584 | 63 | 3 | 1 | 582 | 1 | 572 | 2.2e-215 | 758.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06057 | MS.gene47075 | 0.801154 | 1.03E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47075.t1 | MTR_6g022230 | 90.411 | 584 | 42 | 4 | 1 | 582 | 1 | 572 | 0.0 | 1040 |
| MS.gene47075.t1 | MTR_0117s0080 | 48.780 | 205 | 78 | 4 | 1 | 204 | 6 | 184 | 7.26e-40 | 149 |
| MS.gene47075.t1 | MTR_0117s0080 | 36.842 | 285 | 93 | 7 | 298 | 581 | 181 | 379 | 3.03e-31 | 125 |
| MS.gene47075.t1 | MTR_3g086090 | 54.198 | 131 | 52 | 3 | 4 | 133 | 5 | 128 | 4.95e-32 | 131 |
| MS.gene47075.t1 | MTR_3g086090 | 54.198 | 131 | 52 | 3 | 4 | 133 | 5 | 128 | 5.15e-32 | 131 |
| MS.gene47075.t1 | MTR_3g086090 | 60.000 | 105 | 35 | 2 | 29 | 133 | 12 | 109 | 2.24e-29 | 123 |
| MS.gene47075.t1 | MTR_5g036560 | 61.972 | 71 | 27 | 0 | 26 | 96 | 7 | 77 | 8.21e-23 | 102 |
| MS.gene47075.t1 | MTR_3g055390 | 73.077 | 52 | 14 | 0 | 369 | 420 | 33 | 84 | 7.30e-19 | 82.4 |
| MS.gene47075.t1 | MTR_1g012530 | 45.556 | 90 | 44 | 3 | 426 | 512 | 228 | 315 | 2.74e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47075.t1 | AT3G27350 | 65.625 | 96 | 32 | 1 | 1 | 95 | 1 | 96 | 4.58e-36 | 136 |
| MS.gene47075.t1 | AT3G27350 | 65.625 | 96 | 32 | 1 | 1 | 95 | 1 | 96 | 2.80e-35 | 135 |
| MS.gene47075.t1 | AT3G01710 | 71.951 | 82 | 16 | 2 | 1 | 81 | 1 | 76 | 3.27e-31 | 124 |
| MS.gene47075.t1 | AT3G01710 | 71.951 | 82 | 16 | 2 | 1 | 81 | 1 | 76 | 9.15e-31 | 124 |
| MS.gene47075.t1 | AT3G01710 | 43.678 | 174 | 80 | 6 | 328 | 499 | 227 | 384 | 1.84e-28 | 117 |
| MS.gene47075.t1 | AT3G01710 | 71.951 | 82 | 16 | 2 | 1 | 81 | 1 | 76 | 1.09e-30 | 124 |
| MS.gene47075.t1 | AT3G01710 | 42.938 | 177 | 80 | 7 | 328 | 499 | 227 | 387 | 1.28e-26 | 112 |
| MS.gene47075.t1 | AT3G01710 | 71.951 | 82 | 16 | 2 | 1 | 81 | 1 | 76 | 1.69e-30 | 124 |
| MS.gene47075.t1 | AT3G01710 | 43.429 | 175 | 81 | 6 | 328 | 500 | 227 | 385 | 5.66e-29 | 119 |
| MS.gene47075.t1 | AT5G40700 | 63.415 | 82 | 29 | 1 | 1 | 81 | 1 | 82 | 2.90e-30 | 119 |
| MS.gene47075.t1 | AT5G40700 | 63.415 | 82 | 29 | 1 | 1 | 81 | 1 | 82 | 1.15e-29 | 119 |
| MS.gene47075.t1 | AT5G40700 | 63.415 | 82 | 29 | 1 | 1 | 81 | 1 | 82 | 1.18e-29 | 119 |
| MS.gene47075.t1 | AT3G26050 | 53.846 | 91 | 41 | 1 | 1 | 90 | 1 | 91 | 1.36e-25 | 111 |
| MS.gene47075.t1 | AT1G70100 | 43.636 | 110 | 56 | 2 | 14 | 117 | 9 | 118 | 9.73e-22 | 99.0 |
| MS.gene47075.t1 | AT1G70100 | 43.636 | 110 | 56 | 2 | 14 | 117 | 9 | 118 | 9.73e-22 | 99.0 |
| MS.gene47075.t1 | AT1G70100 | 43.636 | 110 | 56 | 2 | 14 | 117 | 9 | 118 | 9.73e-22 | 99.0 |
| MS.gene47075.t1 | AT1G70100 | 43.636 | 110 | 56 | 2 | 14 | 117 | 9 | 118 | 1.18e-21 | 99.0 |
| MS.gene47075.t1 | AT1G70100 | 29.167 | 240 | 133 | 8 | 14 | 235 | 9 | 229 | 1.31e-21 | 99.0 |
| MS.gene47075.t1 | AT1G70100 | 29.167 | 240 | 133 | 8 | 14 | 235 | 9 | 229 | 1.31e-21 | 99.0 |
| MS.gene47075.t1 | AT1G24160 | 34.703 | 219 | 107 | 10 | 25 | 236 | 30 | 219 | 3.28e-21 | 97.8 |
| MS.gene47075.t1 | AT1G24160 | 34.703 | 219 | 107 | 10 | 25 | 236 | 30 | 219 | 3.28e-21 | 97.8 |
| MS.gene47075.t1 | AT3G27350 | 73.214 | 56 | 15 | 0 | 40 | 95 | 1 | 56 | 3.52e-20 | 91.3 |
| MS.gene47075.t1 | AT1G70950 | 57.333 | 75 | 30 | 1 | 21 | 95 | 12 | 84 | 5.91e-17 | 84.3 |
| MS.gene47075.t1 | AT1G23060 | 30.594 | 219 | 142 | 5 | 33 | 247 | 22 | 234 | 1.12e-16 | 82.4 |
| MS.gene47075.t1 | AT1G23060 | 30.594 | 219 | 142 | 5 | 33 | 247 | 22 | 234 | 1.12e-16 | 82.4 |
Find 89 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTATTGCAGCAGGTTTC+TGG | 0.119202 | 6.3:-15571205 | MS.gene47075:intron |
| GGTGTAAAATTTACTTTCTT+TGG | 0.156449 | 6.3:+15570971 | None:intergenic |
| AGTAGCAAAGTTATCTATTT+TGG | 0.187455 | 6.3:+15571051 | None:intergenic |
| ATTTGTAATTTCTACCAATT+TGG | 0.200931 | 6.3:+15568508 | None:intergenic |
| TTCCTTTCCTTGTAAAATTC+AGG | 0.242565 | 6.3:+15568990 | None:intergenic |
| ATTCTTTGCAATGAAATTCT+TGG | 0.253032 | 6.3:+15568623 | None:intergenic |
| TTACTAATTGCAGGCTTCTA+AGG | 0.257175 | 6.3:-15570371 | MS.gene47075:intron |
| TGGTTCCTATGCTGAATATT+TGG | 0.291791 | 6.3:+15568528 | None:intergenic |
| CACTCTTTCATACTGAGAAT+TGG | 0.292122 | 6.3:+15568693 | None:intergenic |
| ATTGGATATCTTCCTTCATT+AGG | 0.299614 | 6.3:+15568711 | None:intergenic |
| ACCATACAGCCGGTCCTAAA+TGG | 0.300596 | 6.3:-15570151 | MS.gene47075:CDS |
| TGGCATTGGTCAAGAAGTTT+TGG | 0.301897 | 6.3:-15571185 | MS.gene47075:CDS |
| TCCAATCATGACACCAATAT+TGG | 0.308049 | 6.3:-15571826 | MS.gene47075:CDS |
| CCAGAGAGCAAGCGCCATTT+AGG | 0.310606 | 6.3:+15570137 | None:intergenic |
| AATCTATTAAATTCTCTAAT+AGG | 0.315430 | 6.3:+15570950 | None:intergenic |
| ATTGGTAGAAATTACAAATA+AGG | 0.320963 | 6.3:-15568504 | None:intergenic |
| CTGAAAGGCGATGATATAAT+TGG | 0.323544 | 6.3:+15569514 | None:intergenic |
| CATTACCTGATTGGAATCAT+TGG | 0.331909 | 6.3:+15573489 | None:intergenic |
| CCTAAATGGCGCTTGCTCTC+TGG | 0.336773 | 6.3:-15570137 | MS.gene47075:CDS |
| CTTGGACAATCAATCTCATT+TGG | 0.346035 | 6.3:-15572332 | MS.gene47075:CDS |
| TCCAATATTGGTGTCATGAT+TGG | 0.346836 | 6.3:+15571825 | None:intergenic |
| TTGCAGCAGGTTTCTGGCAT+TGG | 0.364934 | 6.3:-15571199 | MS.gene47075:intron |
| TCTTATTTGCAGGAGAAAAC+AGG | 0.368548 | 6.3:-15569068 | MS.gene47075:intron |
| TTCAAGTTGATAAAGTCTAA+TGG | 0.371163 | 6.3:-15571127 | MS.gene47075:CDS |
| ATTCCAGAAGCATAACAAAA+TGG | 0.379083 | 6.3:+15573514 | None:intergenic |
| CTCCATTAACAGAAAATAAC+AGG | 0.381810 | 6.3:-15570324 | MS.gene47075:intron |
| TTCTTCTGTGCAACTGAACC+TGG | 0.381974 | 6.3:+15572221 | None:intergenic |
| AAGAATTTCATTGCAAAGAA+TGG | 0.392366 | 6.3:-15568621 | MS.gene47075:CDS |
| ATTCAGCATAGGAACCAAAT+TGG | 0.393629 | 6.3:-15568522 | MS.gene47075:CDS |
| CAAGCTATCATTTGAAGCCT+TGG | 0.402368 | 6.3:+15570874 | None:intergenic |
| ATTAGACTTTATCAACTTGA+AGG | 0.414940 | 6.3:+15571129 | None:intergenic |
| AACATAATAACCTTCAATAT+CGG | 0.420064 | 6.3:+15571687 | None:intergenic |
| TAGCTTGGAAGCAAAAGCTT+TGG | 0.422621 | 6.3:+15569021 | None:intergenic |
| AGAAACTGAAATACCATAGT+TGG | 0.431426 | 6.3:+15570836 | None:intergenic |
| GCCATTTAGGACCGGCTGTA+TGG | 0.437996 | 6.3:+15570150 | None:intergenic |
| ATGGTAGCAGTAGATTTAAC+AGG | 0.438554 | 6.3:+15571079 | None:intergenic |
| AGAAGAATGTGAAGCACAAA+TGG | 0.439108 | 6.3:-15571952 | MS.gene47075:CDS |
| CTACTCCAATGAGCAACAAT+AGG | 0.440722 | 6.3:-15571033 | MS.gene47075:CDS |
| AGTCACTAGCATGGGAGAAA+TGG | 0.441400 | 6.3:-15572295 | MS.gene47075:CDS |
| GAAGGCCTATTGTTGCTCAT+TGG | 0.444492 | 6.3:+15571028 | None:intergenic |
| AAATTTACTTTCTTTGGAGT+TGG | 0.446539 | 6.3:+15570977 | None:intergenic |
| AGTTGGTGCTTCTTCTTCCA+AGG | 0.449272 | 6.3:-15570891 | MS.gene47075:CDS |
| AATTTCCAATGATTCCAATC+AGG | 0.452229 | 6.3:-15573494 | MS.gene47075:intron |
| TCCTTGTAAAATTCAGGTAG+TGG | 0.461475 | 6.3:+15568996 | None:intergenic |
| TTCAGTGAGGGTCTGTTAAG+AGG | 0.461582 | 6.3:+15568657 | None:intergenic |
| AATGAGCAACATTACCTGAT+TGG | 0.466587 | 6.3:+15573480 | None:intergenic |
| AGAGGATGATGTGCTAAGAT+AGG | 0.470185 | 6.3:+15568597 | None:intergenic |
| TCAGCTTGAGGACAGAAGAA+AGG | 0.475932 | 6.3:-15569495 | MS.gene47075:CDS |
| AATATCGGTGTCATGATTTG+AGG | 0.479371 | 6.3:+15571702 | None:intergenic |
| ATCAACTTGAAGGAAGAAAC+CGG | 0.484003 | 6.3:+15571139 | None:intergenic |
| AATCATGACACCGATATTGA+AGG | 0.486406 | 6.3:-15571697 | MS.gene47075:intron |
| CAGCTTGAGGACAGAAGAAA+GGG | 0.487619 | 6.3:-15569494 | MS.gene47075:CDS |
| GACAATCAATCTCATTTGGA+AGG | 0.493636 | 6.3:-15572328 | MS.gene47075:CDS |
| ATCAAATATTGAAACAAGAA+AGG | 0.496957 | 6.3:-15568964 | MS.gene47075:intron |
| TATCATCGCCTTTCAGCTTG+AGG | 0.505296 | 6.3:-15569507 | MS.gene47075:CDS |
| TTCATTGAATTTGAAGTCAG+AGG | 0.512230 | 6.3:+15568579 | None:intergenic |
| AGGTGTAGTAGTGGTGAACT+TGG | 0.518451 | 6.3:+15571099 | None:intergenic |
| ATTCAGGTAGTGGTCTAGCT+TGG | 0.521457 | 6.3:+15569006 | None:intergenic |
| AAGGGCTGCAAGAAGAAAGA+AGG | 0.536275 | 6.3:-15569476 | MS.gene47075:intron |
| CGCGAAGCAGACGAATCAAT+AGG | 0.537351 | 6.3:+15570176 | None:intergenic |
| GTCAAGGAAGAACAAGATGA+TGG | 0.543084 | 6.3:-15572041 | MS.gene47075:CDS |
| TGTAGTAGTGGTGAACTTGG+AGG | 0.544604 | 6.3:+15571102 | None:intergenic |
| CATCATGAATCACCTAATGA+AGG | 0.551374 | 6.3:-15568723 | MS.gene47075:CDS |
| AGGTTTGAAAATACAAGAGT+TGG | 0.557727 | 6.3:-15570908 | MS.gene47075:CDS |
| AATATTGGTGTCATGATTGG+AGG | 0.559272 | 6.3:+15571828 | None:intergenic |
| AACAATACAAATCATGCACT+TGG | 0.563437 | 6.3:-15572350 | MS.gene47075:CDS |
| TCTTCTGTCCTCAAGCTGAA+AGG | 0.565810 | 6.3:+15569499 | None:intergenic |
| TTTCGGCTTCTTCGACGTAA+CGG | 0.577418 | 6.3:+15572255 | None:intergenic |
| CTTATTTGCAGGAGAAAACA+GGG | 0.582152 | 6.3:-15569067 | MS.gene47075:intron |
| GAGCAAGCGCCATTTAGGAC+CGG | 0.582652 | 6.3:+15570142 | None:intergenic |
| GGAAGAACAAGATGATGGAA+AGG | 0.584651 | 6.3:-15572036 | MS.gene47075:CDS |
| CATGTCAGAGTCACTAGCAT+GGG | 0.586091 | 6.3:-15572303 | MS.gene47075:CDS |
| GAAAAGTTCAAAGGATGAAG+TGG | 0.587267 | 6.3:-15572066 | MS.gene47075:CDS |
| AAAGGATGAAGTGGTTGTCA+AGG | 0.590398 | 6.3:-15572057 | MS.gene47075:CDS |
| TCTGCATTGCTTAATGCAGA+AGG | 0.600195 | 6.3:+15571010 | None:intergenic |
| CATCACCAAATATTCAGCAT+AGG | 0.606535 | 6.3:-15568533 | MS.gene47075:CDS |
| AGATTTAACAGGTGTAGTAG+TGG | 0.607181 | 6.3:+15571090 | None:intergenic |
| GCTGCACAAAACAATGTCAA+TGG | 0.612316 | 6.3:-15572122 | MS.gene47075:CDS |
| GCTTCGCGTAACCATACAGC+CGG | 0.618836 | 6.3:-15570161 | MS.gene47075:CDS |
| GCCGAAAGGTATTCAAAACC+AGG | 0.618947 | 6.3:-15572239 | MS.gene47075:CDS |
| TGACTGCATCAGTGATGAGG+AGG | 0.620737 | 6.3:-15570928 | MS.gene47075:CDS |
| GATTGACTGCATCAGTGATG+AGG | 0.626131 | 6.3:-15570931 | MS.gene47075:CDS |
| TCATGTCAGAGTCACTAGCA+TGG | 0.633171 | 6.3:-15572304 | MS.gene47075:CDS |
| TGATTCGCAGAAAAGTTCAA+AGG | 0.636819 | 6.3:-15572075 | MS.gene47075:CDS |
| AACTAGCAAGAAGAAACCGC+CGG | 0.642813 | 6.3:-15571158 | MS.gene47075:CDS |
| GTTACGTCGAAGAAGCCGAA+AGG | 0.665024 | 6.3:-15572253 | MS.gene47075:CDS |
| TGTGAAGCACAAATGGAACA+AGG | 0.689546 | 6.3:-15571945 | MS.gene47075:CDS |
| GGTGATTCATGATGTGTCTG+CGG | 0.720627 | 6.3:+15568732 | None:intergenic |
| AACTTGAAGGAAGAAACCGG+CGG | 0.775901 | 6.3:+15571142 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATGTTAATTTATTTTG+AGG | - | chr6.3:15570374-15570393 | MS.gene47075:intron | 10.0% |
| !! | AATCGAAATAAAACAAAATA+AGG | + | chr6.3:15570430-15570449 | None:intergenic | 15.0% |
| !! | AATCTATTAAATTCTCTAAT+AGG | + | chr6.3:15571100-15571119 | None:intergenic | 15.0% |
| !! | AATTGAAACTTATTAGATTA+AGG | - | chr6.3:15572050-15572069 | MS.gene47075:CDS | 15.0% |
| !! | ATCGAAATAAAACAAAATAA+GGG | + | chr6.3:15570429-15570448 | None:intergenic | 15.0% |
| !! | TAAGATTTGATTCAAAAAAT+AGG | - | chr6.3:15571540-15571559 | MS.gene47075:intron | 15.0% |
| !! | TCATGAAAAATTAACTAAAA+GGG | + | chr6.3:15568797-15568816 | None:intergenic | 15.0% |
| !! | TGAATTTGTATTGTTTAATT+TGG | - | chr6.3:15568604-15568623 | MS.gene47075:CDS | 15.0% |
| !! | TTCAATTATATAGTATTACA+TGG | - | chr6.3:15573219-15573238 | MS.gene47075:intron | 15.0% |
| !! | TTCATGAAAAATTAACTAAA+AGG | + | chr6.3:15568798-15568817 | None:intergenic | 15.0% |
| !! | TTTATGATGTTTAAAAACAT+TGG | - | chr6.3:15572187-15572206 | MS.gene47075:CDS | 15.0% |
| !!! | TATCATATTAATAGCTTTTT+TGG | - | chr6.3:15572115-15572134 | MS.gene47075:CDS | 15.0% |
| !!! | TATGTAAATTGATTTTTGTT+TGG | - | chr6.3:15569366-15569385 | MS.gene47075:intron | 15.0% |
| !!! | TATGTATTTTGTAAAATCAT+AGG | - | chr6.3:15571839-15571858 | MS.gene47075:CDS | 15.0% |
| !!! | TCTAAAAATATTTTGGATTT+TGG | - | chr6.3:15571339-15571358 | MS.gene47075:intron | 15.0% |
| !!! | TTTACCAATTTTTACTATTA+TGG | + | chr6.3:15573267-15573286 | None:intergenic | 15.0% |
| !!! | TTTAGAGTCTAAAAATATTT+TGG | - | chr6.3:15571332-15571351 | MS.gene47075:intron | 15.0% |
| !! | AACATAATAACCTTCAATAT+CGG | + | chr6.3:15570363-15570382 | None:intergenic | 20.0% |
| !! | AACTATACATGTTTGATTAA+TGG | + | chr6.3:15569034-15569053 | None:intergenic | 20.0% |
| !! | AATCGTGAATTTAAAAATGA+AGG | + | chr6.3:15570459-15570478 | None:intergenic | 20.0% |
| !! | ATCAAATATTGAAACAAGAA+AGG | - | chr6.3:15573083-15573102 | MS.gene47075:intron | 20.0% |
| !! | ATGATTGATTATGTTGTAAA+CGG | - | chr6.3:15568970-15568989 | MS.gene47075:CDS | 20.0% |
| !! | ATTTGTAATTTCTACCAATT+TGG | + | chr6.3:15573542-15573561 | None:intergenic | 20.0% |
| !! | CAATATGGTATGAATTAAAA+AGG | + | chr6.3:15572025-15572044 | None:intergenic | 20.0% |
| !! | CATAAGATACTAATAGTATA+AGG | + | chr6.3:15571257-15571276 | None:intergenic | 20.0% |
| !! | CATGAAAAATTAACTAAAAG+GGG | + | chr6.3:15568796-15568815 | None:intergenic | 20.0% |
| !! | TTAGTAACTTTGTAGAAATT+AGG | + | chr6.3:15571751-15571770 | None:intergenic | 20.0% |
| !! | TTATAGATGATTTATGAGTT+GGG | - | chr6.3:15568879-15568898 | MS.gene47075:intron | 20.0% |
| !! | TTCAAATGAAAAAAGAAAAG+TGG | + | chr6.3:15571440-15571459 | None:intergenic | 20.0% |
| !! | TTTAGATGAACTTTATCTTT+GGG | + | chr6.3:15572386-15572405 | None:intergenic | 20.0% |
| !! | TTTATAGATGATTTATGAGT+TGG | - | chr6.3:15568878-15568897 | MS.gene47075:intron | 20.0% |
| !!! | AAAAAAGACAAATACAGTTT+TGG | + | chr6.3:15570791-15570810 | None:intergenic | 20.0% |
| !!! | AAACCTTAAGATTTTGTTTT+GGG | - | chr6.3:15569584-15569603 | MS.gene47075:intron | 20.0% |
| !!! | AAGAATAGTTTAGAGTTTAA+TGG | - | chr6.3:15569054-15569073 | MS.gene47075:CDS | 20.0% |
| !!! | ACTGTATTTGTCTTTTTTTA+AGG | - | chr6.3:15570793-15570812 | MS.gene47075:intron | 20.0% |
| !!! | CATTTTTAAATTCACGATTT+CGG | - | chr6.3:15570460-15570479 | MS.gene47075:intron | 20.0% |
| !!! | CTTTTTAATTCATACCATAT+TGG | - | chr6.3:15572023-15572042 | MS.gene47075:CDS | 20.0% |
| !!! | GTTTTTCAAATTGGTAAATA+AGG | - | chr6.3:15573113-15573132 | MS.gene47075:intron | 20.0% |
| !!! | TAAACCTTAAGATTTTGTTT+TGG | - | chr6.3:15569583-15569602 | MS.gene47075:intron | 20.0% |
| !!! | TGCCATAATTTTCAAAATAT+GGG | - | chr6.3:15568769-15568788 | MS.gene47075:intron | 20.0% |
| !!! | TGTTTTAAGGAATTCATTAA+GGG | - | chr6.3:15570254-15570273 | MS.gene47075:intron | 20.0% |
| !!! | TTGCCATAATTTTCAAAATA+TGG | - | chr6.3:15568768-15568787 | MS.gene47075:intron | 20.0% |
| !!! | TTGTTTTAAGGAATTCATTA+AGG | - | chr6.3:15570253-15570272 | MS.gene47075:intron | 20.0% |
| !!! | TTTATTTTGAGGAATGTTTT+TGG | - | chr6.3:15570385-15570404 | MS.gene47075:intron | 20.0% |
| !!! | TTTTAGATGAACTTTATCTT+TGG | + | chr6.3:15572387-15572406 | None:intergenic | 20.0% |
| !!! | TTTTCATCATTTTTAGAAAC+TGG | - | chr6.3:15572673-15572692 | MS.gene47075:intron | 20.0% |
| ! | AAATACATAAACACAATGTC+AGG | + | chr6.3:15571828-15571847 | None:intergenic | 25.0% |
| ! | AAGAATTTCATTGCAAAGAA+TGG | - | chr6.3:15573426-15573445 | MS.gene47075:intron | 25.0% |
| ! | ACTTCATTTGTATCATGTAA+TGG | + | chr6.3:15568911-15568930 | None:intergenic | 25.0% |
| ! | AGTTTCAATTCTTTCCAATA+TGG | + | chr6.3:15572040-15572059 | None:intergenic | 25.0% |
| ! | ATATGATACAAGTGTATGTT+TGG | + | chr6.3:15569541-15569560 | None:intergenic | 25.0% |
| ! | ATTAGACTTTATCAACTTGA+AGG | + | chr6.3:15570921-15570940 | None:intergenic | 25.0% |
| ! | ATTCTTTGCAATGAAATTCT+TGG | + | chr6.3:15573427-15573446 | None:intergenic | 25.0% |
| ! | CTCAATAGTTCACATAAAAT+TGG | - | chr6.3:15569282-15569301 | MS.gene47075:intron | 25.0% |
| ! | CTTCTGTTTAATTGATTATG+AGG | - | chr6.3:15572618-15572637 | MS.gene47075:intron | 25.0% |
| ! | GAAACTTATTAGATTAAGGT+TGG | - | chr6.3:15572054-15572073 | MS.gene47075:CDS | 25.0% |
| ! | GGTGTAAAATTTACTTTCTT+TGG | + | chr6.3:15571079-15571098 | None:intergenic | 25.0% |
| ! | GTGTCCATAATAGTAAAAAT+TGG | - | chr6.3:15573260-15573279 | MS.gene47075:intron | 25.0% |
| ! | TAAACAGAAGAGAAACATAA+GGG | + | chr6.3:15572608-15572627 | None:intergenic | 25.0% |
| ! | TGAGACTAAATCAATTCTAT+AGG | - | chr6.3:15569406-15569425 | MS.gene47075:intron | 25.0% |
| ! | TTAAACAGAAGAGAAACATA+AGG | + | chr6.3:15572609-15572628 | None:intergenic | 25.0% |
| ! | TTGAAAATAACTGAATGTGT+CGG | + | chr6.3:15573204-15573223 | None:intergenic | 25.0% |
| !! | AGTAGCAAAGTTATCTATTT+TGG | + | chr6.3:15570999-15571018 | None:intergenic | 25.0% |
| !! | TATATAATGCTCTTATTTGC+AGG | - | chr6.3:15572969-15572988 | MS.gene47075:intron | 25.0% |
| !! | TCACTATGATGATTCATTTT+TGG | - | chr6.3:15571396-15571415 | MS.gene47075:intron | 25.0% |
| !! | TGATTCTAAAAGCTAGAATT+TGG | + | chr6.3:15569440-15569459 | None:intergenic | 25.0% |
| !! | TTTTGGATTAAATGCAGTTT+CGG | - | chr6.3:15570402-15570421 | MS.gene47075:intron | 25.0% |
| !!! | AAATTTACTTTCTTTGGAGT+TGG | + | chr6.3:15571073-15571092 | None:intergenic | 25.0% |
| !!! | ACAATTGCTTTTTCCAATAT+TGG | + | chr6.3:15570237-15570256 | None:intergenic | 25.0% |
| !!! | ACTAAAATAACTCACTTTTG+AGG | - | chr6.3:15568637-15568656 | MS.gene47075:CDS | 25.0% |
| !!! | ATAACTGTTACTTTACTTGA+AGG | - | chr6.3:15572445-15572464 | MS.gene47075:intron | 25.0% |
| !!! | GGTAATCTTGTTTTTCAAAT+TGG | - | chr6.3:15573104-15573123 | MS.gene47075:intron | 25.0% |
| !!! | GTCCCATATTTTGAAAATTA+TGG | + | chr6.3:15568774-15568793 | None:intergenic | 25.0% |
| !!! | GTTATCTATTTTGGAAGAAA+TGG | + | chr6.3:15570990-15571009 | None:intergenic | 25.0% |
| !!! | GTTTCATAGTTTTTTCAATG+TGG | + | chr6.3:15569662-15569681 | None:intergenic | 25.0% |
| !!! | TAACTGTTACTTTACTTGAA+GGG | - | chr6.3:15572446-15572465 | MS.gene47075:intron | 25.0% |
| !!! | TACCTGTTATTTTCTGTTAA+TGG | + | chr6.3:15571728-15571747 | None:intergenic | 25.0% |
| !!! | TGGAAAAAGCAATTGTTTTA+AGG | - | chr6.3:15570241-15570260 | MS.gene47075:intron | 25.0% |
| !!! | TGTTTTAAGGAATTCAATGA+TGG | - | chr6.3:15570128-15570147 | MS.gene47075:intron | 25.0% |
| !!! | TTCAAGTTGATAAAGTCTAA+TGG | - | chr6.3:15570920-15570939 | MS.gene47075:CDS | 25.0% |
| !!! | TTCACATAAAATTGGTTTTG+TGG | - | chr6.3:15569290-15569309 | MS.gene47075:intron | 25.0% |
| AAATGCATACACTAGGAAAA+TGG | + | chr6.3:15570509-15570528 | None:intergenic | 30.0% | |
| AAATTTGACTCATCGAAAAG+TGG | - | chr6.3:15569513-15569532 | MS.gene47075:CDS | 30.0% | |
| AACAATACAAATCATGCACT+TGG | - | chr6.3:15569697-15569716 | MS.gene47075:intron | 30.0% | |
| AATTTCCAATGATTCCAATC+AGG | - | chr6.3:15568553-15568572 | MS.gene47075:CDS | 30.0% | |
| ACACACGAATTACTCAATAT+TGG | + | chr6.3:15571996-15572015 | None:intergenic | 30.0% | |
| ACAGTTATTGTGTGTTTAAG+TGG | + | chr6.3:15572424-15572443 | None:intergenic | 30.0% | |
| ACTCCCAAAACAAAATCTTA+AGG | + | chr6.3:15569590-15569609 | None:intergenic | 30.0% | |
| AGAAACTGAAATACCATAGT+TGG | + | chr6.3:15571214-15571233 | None:intergenic | 30.0% | |
| AGGTTTGAAAATACAAGAGT+TGG | - | chr6.3:15571139-15571158 | MS.gene47075:CDS | 30.0% | |
| ATGAATCATCATAGTGAACA+AGG | + | chr6.3:15571393-15571412 | None:intergenic | 30.0% | |
| ATTGGATATCTTCCTTCATT+AGG | + | chr6.3:15573339-15573358 | None:intergenic | 30.0% | |
| CTCCATTAACAGAAAATAAC+AGG | - | chr6.3:15571723-15571742 | MS.gene47075:CDS | 30.0% | |
| GAAACACATATTAGTACACT+TGG | + | chr6.3:15572090-15572109 | None:intergenic | 30.0% | |
| GAATGATGCAAGATTGATTA+TGG | - | chr6.3:15569329-15569348 | MS.gene47075:CDS | 30.0% | |
| TCACAGAAACTAGACTTTAA+AGG | - | chr6.3:15572912-15572931 | MS.gene47075:intron | 30.0% | |
| TGATGGTTGAATTGCAAAAA+AGG | - | chr6.3:15570145-15570164 | MS.gene47075:CDS | 30.0% | |
| TTCCTTTCCTTGTAAAATTC+AGG | + | chr6.3:15573060-15573079 | None:intergenic | 30.0% | |
| ! | ATTCCAGAAGCATAACAAAA+TGG | + | chr6.3:15568536-15568555 | None:intergenic | 30.0% |
| ! | CAAACCTTGAATTTTTCATG+TGG | + | chr6.3:15572740-15572759 | None:intergenic | 30.0% |
| ! | TAAAAACATTGGCTAAAACG+TGG | - | chr6.3:15572198-15572217 | MS.gene47075:CDS | 30.0% |
| ! | TACCTGAATTTTACAAGGAA+AGG | - | chr6.3:15573055-15573074 | MS.gene47075:intron | 30.0% |
| ! | TGAAATTTTCAGTGTTAGAC+AGG | - | chr6.3:15571968-15571987 | MS.gene47075:CDS | 30.0% |
| ! | TTCATTGAATTTGAAGTCAG+AGG | + | chr6.3:15573471-15573490 | None:intergenic | 30.0% |
| !! | AAAACAGTTCAAAGAGTGTT+TGG | - | chr6.3:15572249-15572268 | MS.gene47075:CDS | 30.0% |
| !! | AACTGTTACTTTACTTGAAG+GGG | - | chr6.3:15572447-15572466 | MS.gene47075:intron | 30.0% |
| !! | ATACTTATGTGGCTTTAGAT+TGG | - | chr6.3:15570559-15570578 | MS.gene47075:intron | 30.0% |
| !! | GATGGTCAATATTTCAAGTT+CGG | + | chr6.3:15570695-15570714 | None:intergenic | 30.0% |
| !!! | GAGTCATTTTTACTAATTGC+AGG | - | chr6.3:15571667-15571686 | MS.gene47075:intron | 30.0% |
| !!! | GATTTTGTTTTGGGAGTATA+CGG | - | chr6.3:15569593-15569612 | MS.gene47075:intron | 30.0% |
| AATCATGACACCGATATTGA+AGG | - | chr6.3:15570350-15570369 | MS.gene47075:CDS | 35.0% | |
| AATGAGCAACATTACCTGAT+TGG | + | chr6.3:15568570-15568589 | None:intergenic | 35.0% | |
| ACACATATTAGTACACTTGG+TGG | + | chr6.3:15572087-15572106 | None:intergenic | 35.0% | |
| ACCAGACTAAGGACTAAATA+TGG | - | chr6.3:15572879-15572898 | MS.gene47075:intron | 35.0% | |
| AGAAGAATGTGAAGCACAAA+TGG | - | chr6.3:15570095-15570114 | MS.gene47075:intron | 35.0% | |
| AGATTTAACAGGTGTAGTAG+TGG | + | chr6.3:15570960-15570979 | None:intergenic | 35.0% | |
| ATCAACTTGAAGGAAGAAAC+CGG | + | chr6.3:15570911-15570930 | None:intergenic | 35.0% | |
| ATGGTAGCAGTAGATTTAAC+AGG | + | chr6.3:15570971-15570990 | None:intergenic | 35.0% | |
| ATTCAGCATAGGAACCAAAT+TGG | - | chr6.3:15573525-15573544 | MS.gene47075:CDS | 35.0% | |
| CACTCTTTCATACTGAGAAT+TGG | + | chr6.3:15573357-15573376 | None:intergenic | 35.0% | |
| CATCACCAAATATTCAGCAT+AGG | - | chr6.3:15573514-15573533 | MS.gene47075:CDS | 35.0% | |
| CATCATGAATCACCTAATGA+AGG | - | chr6.3:15573324-15573343 | MS.gene47075:intron | 35.0% | |
| CATTACCTGATTGGAATCAT+TGG | + | chr6.3:15568561-15568580 | None:intergenic | 35.0% | |
| CTGAAAGGCGATGATATAAT+TGG | + | chr6.3:15572536-15572555 | None:intergenic | 35.0% | |
| CTTATTTGCAGGAGAAAACA+GGG | - | chr6.3:15572980-15572999 | MS.gene47075:intron | 35.0% | |
| CTTGGACAATCAATCTCATT+TGG | - | chr6.3:15569715-15569734 | MS.gene47075:intron | 35.0% | |
| CTTGTTAAGTTAGTCCTACA+AGG | - | chr6.3:15572814-15572833 | MS.gene47075:intron | 35.0% | |
| GAAAAGTTCAAAGGATGAAG+TGG | - | chr6.3:15569981-15570000 | MS.gene47075:intron | 35.0% | |
| GACAATCAATCTCATTTGGA+AGG | - | chr6.3:15569719-15569738 | MS.gene47075:intron | 35.0% | |
| TAGAGAAAACTTGACACTGA+AGG | + | chr6.3:15571794-15571813 | None:intergenic | 35.0% | |
| TCAATGAGTGTCTTGTATTC+AGG | + | chr6.3:15569219-15569238 | None:intergenic | 35.0% | |
| TCCAATCATGACACCAATAT+TGG | - | chr6.3:15570221-15570240 | MS.gene47075:intron | 35.0% | |
| TCCATATTTAGTCCTTAGTC+TGG | + | chr6.3:15572883-15572902 | None:intergenic | 35.0% | |
| TCCTTGTAAAATTCAGGTAG+TGG | + | chr6.3:15573054-15573073 | None:intergenic | 35.0% | |
| TGATTCGCAGAAAAGTTCAA+AGG | - | chr6.3:15569972-15569991 | MS.gene47075:intron | 35.0% | |
| TGGTTCCTATGCTGAATATT+TGG | + | chr6.3:15573522-15573541 | None:intergenic | 35.0% | |
| TGTTTACAGCAATTGCAACT+TGG | + | chr6.3:15571637-15571656 | None:intergenic | 35.0% | |
| TTACTAATTGCAGGCTTCTA+AGG | - | chr6.3:15571676-15571695 | MS.gene47075:intron | 35.0% | |
| TTACTGAAATCACCAGACTA+AGG | - | chr6.3:15572868-15572887 | MS.gene47075:intron | 35.0% | |
| TTTCCTAGTGTATGCATTTG+AGG | - | chr6.3:15570510-15570529 | MS.gene47075:intron | 35.0% | |
| ! | ACAAGACACTCATTGATTGT+CGG | - | chr6.3:15569223-15569242 | MS.gene47075:intron | 35.0% |
| ! | ACCACTACCTGAATTTTACA+AGG | - | chr6.3:15573050-15573069 | MS.gene47075:intron | 35.0% |
| ! | TCCTCTAAAAACTCCAACTA+TGG | - | chr6.3:15571198-15571217 | MS.gene47075:intron | 35.0% |
| ! | TCTTATTTGCAGGAGAAAAC+AGG | - | chr6.3:15572979-15572998 | MS.gene47075:intron | 35.0% |
| !! | AATATCGGTGTCATGATTTG+AGG | + | chr6.3:15570348-15570367 | None:intergenic | 35.0% |
| !! | AATATTGGTGTCATGATTGG+AGG | + | chr6.3:15570222-15570241 | None:intergenic | 35.0% |
| !! | ACCATAGTTGGAGTTTTTAG+AGG | + | chr6.3:15571202-15571221 | None:intergenic | 35.0% |
| !! | AGTCTCTAAAATCACCTTGT+AGG | + | chr6.3:15572831-15572850 | None:intergenic | 35.0% |
| !! | CAACCATTTTGTTATGCTTC+TGG | - | chr6.3:15568530-15568549 | MS.gene47075:CDS | 35.0% |
| !! | TCCAATATTGGTGTCATGAT+TGG | + | chr6.3:15570225-15570244 | None:intergenic | 35.0% |
| !!! | ACCTGGTTTTGAATACCTTT+CGG | + | chr6.3:15569812-15569831 | None:intergenic | 35.0% |
| !!! | CTTGAAGGGGCTTTATTTTT+CGG | - | chr6.3:15572460-15572479 | MS.gene47075:intron | 35.0% |
| !!! | TGGAACAAGGTGTTGTTTTA+AGG | - | chr6.3:15570115-15570134 | MS.gene47075:intron | 35.0% |
| !!! | TTTTTTTAAGGTCATAGCCG+TGG | - | chr6.3:15570805-15570824 | MS.gene47075:intron | 35.0% |
| AAAGGATGAAGTGGTTGTCA+AGG | - | chr6.3:15569990-15570009 | MS.gene47075:intron | 40.0% | |
| AGACCCTCACTGAAAAACAA+TGG | - | chr6.3:15573399-15573418 | MS.gene47075:intron | 40.0% | |
| AGAGGATGATGTGCTAAGAT+AGG | + | chr6.3:15573453-15573472 | None:intergenic | 40.0% | |
| ATCTGTGACGACAGCATATA+AGG | - | chr6.3:15570764-15570783 | MS.gene47075:intron | 40.0% | |
| ATGTTGGTACTTATTGCAGC+AGG | - | chr6.3:15570835-15570854 | MS.gene47075:intron | 40.0% | |
| CAACCTCAAATGCATACACT+AGG | + | chr6.3:15570516-15570535 | None:intergenic | 40.0% | |
| CAGTCCAAAACTGAAGTTGA+AGG | + | chr6.3:15571610-15571629 | None:intergenic | 40.0% | |
| CATTCACACAGTCAACACAT+CGG | + | chr6.3:15570738-15570757 | None:intergenic | 40.0% | |
| CTACTCCAATGAGCAACAAT+AGG | - | chr6.3:15571014-15571033 | MS.gene47075:CDS | 40.0% | |
| GCAGCCACATGAAAAATTCA+AGG | - | chr6.3:15572733-15572752 | MS.gene47075:intron | 40.0% | |
| GCTGCACAAAACAATGTCAA+TGG | - | chr6.3:15569925-15569944 | MS.gene47075:intron | 40.0% | |
| GTCAAGGAAGAACAAGATGA+TGG | - | chr6.3:15570006-15570025 | MS.gene47075:intron | 40.0% | |
| GTCATTGGACTAAGATCAGA+TGG | + | chr6.3:15570713-15570732 | None:intergenic | 40.0% | |
| GTGTGAGTGAAGCTACAAAT+TGG | - | chr6.3:15572302-15572321 | MS.gene47075:CDS | 40.0% | |
| TACTTATTGCAGCAGGTTTC+TGG | - | chr6.3:15570842-15570861 | MS.gene47075:intron | 40.0% | |
| TAGCTTGGAAGCAAAAGCTT+TGG | + | chr6.3:15573029-15573048 | None:intergenic | 40.0% | |
| TCTGCATTGCTTAATGCAGA+AGG | + | chr6.3:15571040-15571059 | None:intergenic | 40.0% | |
| TGTGAAGCACAAATGGAACA+AGG | - | chr6.3:15570102-15570121 | MS.gene47075:intron | 40.0% | |
| ! | CAAGCTATCATTTGAAGCCT+TGG | + | chr6.3:15571176-15571195 | None:intergenic | 40.0% |
| ! | CAGTCCTTCAACTTCAGTTT+TGG | - | chr6.3:15571603-15571622 | MS.gene47075:intron | 40.0% |
| ! | CCACATAAGTATGTCGCTTA+CGG | + | chr6.3:15570551-15570570 | None:intergenic | 40.0% |
| !! | CATTGGCTAAAACGTGGTTT+TGG | - | chr6.3:15572204-15572223 | MS.gene47075:CDS | 40.0% |
| !! | GGAAGAACAAGATGATGGAA+AGG | - | chr6.3:15570011-15570030 | MS.gene47075:intron | 40.0% |
| !! | GTGCCATTGTTTTTCAGTGA+GGG | + | chr6.3:15573405-15573424 | None:intergenic | 40.0% |
| !!! | TGGCATTGGTCAAGAAGTTT+TGG | - | chr6.3:15570862-15570881 | MS.gene47075:CDS | 40.0% |
| AACTAGCAAGAAGAAACCGC+CGG | - | chr6.3:15570889-15570908 | MS.gene47075:CDS | 45.0% | |
| AACTTGAAGGAAGAAACCGG+CGG | + | chr6.3:15570908-15570927 | None:intergenic | 45.0% | |
| AAGGGCTGCAAGAAGAAAGA+AGG | - | chr6.3:15572571-15572590 | MS.gene47075:intron | 45.0% | |
| AGGTGTAGTAGTGGTGAACT+TGG | + | chr6.3:15570951-15570970 | None:intergenic | 45.0% | |
| AGTCACTAGCATGGGAGAAA+TGG | - | chr6.3:15569752-15569771 | MS.gene47075:intron | 45.0% | |
| ATTCCACTCAGTCAGCACAA+TGG | - | chr6.3:15570603-15570622 | MS.gene47075:intron | 45.0% | |
| CAGCTTGAGGACAGAAGAAA+GGG | - | chr6.3:15572553-15572572 | MS.gene47075:intron | 45.0% | |
| CATGTCAGAGTCACTAGCAT+GGG | - | chr6.3:15569744-15569763 | MS.gene47075:intron | 45.0% | |
| CCGTAAGCGACATACTTATG+TGG | - | chr6.3:15570548-15570567 | MS.gene47075:intron | 45.0% | |
| GAAGGCCTATTGTTGCTCAT+TGG | + | chr6.3:15571022-15571041 | None:intergenic | 45.0% | |
| GATTGACTGCATCAGTGATG+AGG | - | chr6.3:15571116-15571135 | MS.gene47075:CDS | 45.0% | |
| GGTGATTCATGATGTGTCTG+CGG | + | chr6.3:15573318-15573337 | None:intergenic | 45.0% | |
| GTACCAACATGTTAGTGCCA+CGG | + | chr6.3:15570825-15570844 | None:intergenic | 45.0% | |
| TATCATCGCCTTTCAGCTTG+AGG | - | chr6.3:15572540-15572559 | MS.gene47075:intron | 45.0% | |
| TCAGCTTGAGGACAGAAGAA+AGG | - | chr6.3:15572552-15572571 | MS.gene47075:intron | 45.0% | |
| TCATGTCAGAGTCACTAGCA+TGG | - | chr6.3:15569743-15569762 | MS.gene47075:intron | 45.0% | |
| TCTTCTGTCCTCAAGCTGAA+AGG | + | chr6.3:15572551-15572570 | None:intergenic | 45.0% | |
| TGTAGTAGTGGTGAACTTGG+AGG | + | chr6.3:15570948-15570967 | None:intergenic | 45.0% | |
| TTCAGTGAGGGTCTGTTAAG+AGG | + | chr6.3:15573393-15573412 | None:intergenic | 45.0% | |
| TTCTTCTGTGCAACTGAACC+TGG | + | chr6.3:15569829-15569848 | None:intergenic | 45.0% | |
| TTTCGGCTTCTTCGACGTAA+CGG | + | chr6.3:15569795-15569814 | None:intergenic | 45.0% | |
| ! | AGTTGGTGCTTCTTCTTCCA+AGG | - | chr6.3:15571156-15571175 | MS.gene47075:CDS | 45.0% |
| ! | ATTCAGGTAGTGGTCTAGCT+TGG | + | chr6.3:15573044-15573063 | None:intergenic | 45.0% |
| !! | ATGTGTCGGTGTTGTGTAAG+TGG | + | chr6.3:15573190-15573209 | None:intergenic | 45.0% |
| !! | GCCGAAAGGTATTCAAAACC+AGG | - | chr6.3:15569808-15569827 | MS.gene47075:intron | 45.0% |
| !! | GTGTTGACTGTGTGAATGTG+TGG | - | chr6.3:15570740-15570759 | MS.gene47075:intron | 45.0% |
| !!! | GGTGCCATTGTTTTTCAGTG+AGG | + | chr6.3:15573406-15573425 | None:intergenic | 45.0% |
| !! | AGAAATAAATATTTATAATT+TGG | - | chr6.3:15568714-15568733 | MS.gene47075:CDS | 5.0% |
| !!! | TTATATTTAATTATTGTTTT+TGG | - | chr6.3:15569007-15569026 | MS.gene47075:CDS | 5.0% |
| ACCATACAGCCGGTCCTAAA+TGG | - | chr6.3:15571896-15571915 | MS.gene47075:CDS | 50.0% | |
| CGCGAAGCAGACGAATCAAT+AGG | + | chr6.3:15571874-15571893 | None:intergenic | 50.0% | |
| CTTGAACCACGAGTCAGTGT+CGG | - | chr6.3:15573164-15573183 | MS.gene47075:intron | 50.0% | |
| GGCACACCTTTCGATAACTG+TGG | + | chr6.3:15570488-15570507 | None:intergenic | 50.0% | |
| GTCAACACATCGGTGGTCAT+TGG | + | chr6.3:15570728-15570747 | None:intergenic | 50.0% | |
| GTTACGTCGAAGAAGCCGAA+AGG | - | chr6.3:15569794-15569813 | MS.gene47075:intron | 50.0% | |
| TAGCCGTGGCACTAACATGT+TGG | - | chr6.3:15570819-15570838 | MS.gene47075:intron | 50.0% | |
| TCACACAGTCAACACATCGG+TGG | + | chr6.3:15570735-15570754 | None:intergenic | 50.0% | |
| TGACTGCATCAGTGATGAGG+AGG | - | chr6.3:15571119-15571138 | MS.gene47075:CDS | 50.0% | |
| ! | AGAGTGTTTGGAACCGCAGT+GGG | - | chr6.3:15572261-15572280 | MS.gene47075:CDS | 50.0% |
| !! | AAGAGTGTTTGGAACCGCAG+TGG | - | chr6.3:15572260-15572279 | MS.gene47075:CDS | 50.0% |
| !! | TCACCATTGTGCTGACTGAG+TGG | + | chr6.3:15570609-15570628 | None:intergenic | 50.0% |
| !! | TCGGTGCCACAGTTATCGAA+AGG | - | chr6.3:15570479-15570498 | MS.gene47075:intron | 50.0% |
| !! | TTGCAGCAGGTTTCTGGCAT+TGG | - | chr6.3:15570848-15570867 | MS.gene47075:intron | 50.0% |
| CCAGAGAGCAAGCGCCATTT+AGG | + | chr6.3:15571913-15571932 | None:intergenic | 55.0% | |
| CCTAAATGGCGCTTGCTCTC+TGG | - | chr6.3:15571910-15571929 | MS.gene47075:CDS | 55.0% | |
| GCTTCGCGTAACCATACAGC+CGG | - | chr6.3:15571886-15571905 | MS.gene47075:CDS | 55.0% | |
| GGTGACTGCTGTATCGCGAT+TGG | - | chr6.3:15570624-15570643 | MS.gene47075:intron | 55.0% | |
| GTAGCTTCACTCACACCACG+TGG | + | chr6.3:15572298-15572317 | None:intergenic | 55.0% | |
| ! | AGTGTTTGGAACCGCAGTGG+GGG | - | chr6.3:15572263-15572282 | MS.gene47075:CDS | 55.0% |
| ! | GAGCAAGCGCCATTTAGGAC+CGG | + | chr6.3:15571908-15571927 | None:intergenic | 55.0% |
| ! | GAGTGTTTGGAACCGCAGTG+GGG | - | chr6.3:15572262-15572281 | MS.gene47075:CDS | 55.0% |
| ! | GCCATTTAGGACCGGCTGTA+TGG | + | chr6.3:15571900-15571919 | None:intergenic | 55.0% |
| !! | AAGTGGCCGACACTGACTCG+TGG | + | chr6.3:15573173-15573192 | None:intergenic | 60.0% |
| TGGGGGATGCTCTCACCACG+TGG | - | chr6.3:15572280-15572299 | MS.gene47075:CDS | 65.0% | |
| !! | GGTGAGAGCATCCCCCACTG+CGG | + | chr6.3:15572277-15572296 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 15568506 | 15573563 | 15568506 | ID=MS.gene47075 |
| chr6.3 | mRNA | 15568506 | 15573563 | 15568506 | ID=MS.gene47075.t1;Parent=MS.gene47075 |
| chr6.3 | exon | 15573495 | 15573563 | 15573495 | ID=MS.gene47075.t1.exon1;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15573495 | 15573563 | 15573495 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| chr6.3 | exon | 15571698 | 15572372 | 15571698 | ID=MS.gene47075.t1.exon2;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15571698 | 15572372 | 15571698 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| chr6.3 | exon | 15570850 | 15571215 | 15570850 | ID=MS.gene47075.t1.exon3;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15570850 | 15571215 | 15570850 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| chr6.3 | exon | 15570325 | 15570380 | 15570325 | ID=MS.gene47075.t1.exon4;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15570325 | 15570380 | 15570325 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| chr6.3 | exon | 15570134 | 15570208 | 15570134 | ID=MS.gene47075.t1.exon5;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15570134 | 15570208 | 15570134 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| chr6.3 | exon | 15569477 | 15569552 | 15569477 | ID=MS.gene47075.t1.exon6;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15569477 | 15569552 | 15569477 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| chr6.3 | exon | 15569315 | 15569380 | 15569315 | ID=MS.gene47075.t1.exon7;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15569315 | 15569380 | 15569315 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| chr6.3 | exon | 15568965 | 15569078 | 15568965 | ID=MS.gene47075.t1.exon8;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15568965 | 15569078 | 15568965 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| chr6.3 | exon | 15568506 | 15568757 | 15568506 | ID=MS.gene47075.t1.exon9;Parent=MS.gene47075.t1 |
| chr6.3 | CDS | 15568506 | 15568757 | 15568506 | ID=cds.MS.gene47075.t1;Parent=MS.gene47075.t1 |
| Gene Sequence |
| Protein sequence |
