Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47296.t1 | XP_013451533.1 | 93 | 631 | 40 | 2 | 1 | 629 | 1 | 629 | 0.00E+00 | 1140.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47296.t1 | Q9ASS7 | 63.8 | 633 | 207 | 7 | 1 | 619 | 1 | 625 | 2.7e-221 | 769.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47296.t1 | A0A072U854 | 93.0 | 631 | 40 | 2 | 1 | 629 | 1 | 629 | 0.0e+00 | 1140.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052932 | MS.gene47296 | 0.800554 | 1.36E-48 | -1.69E-46 |
| MS.gene053456 | MS.gene47296 | 0.801825 | 7.50E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47296.t1 | MTR_6g027660 | 93.027 | 631 | 40 | 2 | 1 | 629 | 1 | 629 | 0.0 | 1184 |
| MS.gene47296.t1 | MTR_6g027630 | 85.945 | 619 | 73 | 4 | 9 | 616 | 5 | 620 | 0.0 | 1057 |
| MS.gene47296.t1 | MTR_6g027650 | 82.803 | 628 | 90 | 6 | 9 | 629 | 5 | 621 | 0.0 | 1021 |
| MS.gene47296.t1 | MTR_6g027680 | 86.587 | 589 | 54 | 5 | 1 | 578 | 1 | 575 | 0.0 | 994 |
| MS.gene47296.t1 | MTR_6g027630 | 85.714 | 581 | 69 | 4 | 9 | 578 | 5 | 582 | 0.0 | 987 |
| MS.gene47296.t1 | MTR_6g027630 | 85.475 | 537 | 69 | 2 | 87 | 616 | 1 | 535 | 0.0 | 916 |
| MS.gene47296.t1 | MTR_7g086610 | 69.775 | 622 | 171 | 5 | 13 | 626 | 3 | 615 | 0.0 | 837 |
| MS.gene47296.t1 | MTR_7g086510 | 58.521 | 622 | 236 | 8 | 24 | 629 | 21 | 636 | 0.0 | 705 |
| MS.gene47296.t1 | MTR_6g027670 | 84.713 | 314 | 29 | 2 | 272 | 578 | 5 | 306 | 0.0 | 516 |
| MS.gene47296.t1 | MTR_7g007850 | 30.897 | 602 | 352 | 10 | 22 | 604 | 22 | 578 | 2.72e-78 | 260 |
| MS.gene47296.t1 | MTR_1g030660 | 36.341 | 399 | 233 | 6 | 33 | 425 | 58 | 441 | 8.71e-74 | 248 |
| MS.gene47296.t1 | MTR_7g007850 | 35.035 | 431 | 259 | 7 | 22 | 440 | 22 | 443 | 2.44e-72 | 241 |
| MS.gene47296.t1 | MTR_7g007850 | 35.817 | 416 | 246 | 7 | 22 | 425 | 22 | 428 | 3.41e-72 | 242 |
| MS.gene47296.t1 | MTR_8g089320 | 33.255 | 424 | 270 | 4 | 7 | 425 | 31 | 446 | 6.07e-72 | 243 |
| MS.gene47296.t1 | MTR_7g007850 | 30.924 | 595 | 331 | 12 | 22 | 604 | 22 | 548 | 1.92e-71 | 241 |
| MS.gene47296.t1 | MTR_8g089360 | 29.833 | 600 | 338 | 11 | 22 | 614 | 38 | 561 | 5.53e-67 | 229 |
| MS.gene47296.t1 | MTR_8g089360 | 29.833 | 600 | 338 | 11 | 22 | 614 | 55 | 578 | 7.02e-67 | 229 |
| MS.gene47296.t1 | MTR_2g035430 | 31.915 | 423 | 277 | 3 | 7 | 425 | 31 | 446 | 3.18e-65 | 225 |
| MS.gene47296.t1 | MTR_1g111740 | 32.787 | 427 | 270 | 5 | 6 | 426 | 19 | 434 | 6.67e-65 | 224 |
| MS.gene47296.t1 | MTR_8g461380 | 32.828 | 396 | 256 | 4 | 44 | 439 | 79 | 464 | 4.92e-56 | 200 |
| MS.gene47296.t1 | MTR_4g099270 | 34.794 | 388 | 246 | 3 | 41 | 426 | 19 | 401 | 6.71e-54 | 193 |
| MS.gene47296.t1 | MTR_4g099270 | 35.920 | 348 | 216 | 3 | 41 | 386 | 40 | 382 | 1.54e-47 | 172 |
| MS.gene47296.t1 | MTR_8g089340 | 31.699 | 306 | 200 | 3 | 121 | 425 | 1 | 298 | 4.96e-42 | 158 |
| MS.gene47296.t1 | MTR_4g099270 | 33.673 | 294 | 188 | 3 | 135 | 426 | 1 | 289 | 2.69e-37 | 144 |
| MS.gene47296.t1 | MTR_4g099270 | 35.897 | 273 | 168 | 3 | 41 | 311 | 40 | 307 | 5.31e-34 | 132 |
| MS.gene47296.t1 | MTR_8g089342 | 40.659 | 91 | 54 | 0 | 22 | 112 | 51 | 141 | 6.86e-15 | 72.4 |
| MS.gene47296.t1 | MTR_6g034535 | 31.667 | 120 | 75 | 2 | 324 | 439 | 69 | 185 | 4.28e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47296.t1 | AT1G58030 | 63.823 | 633 | 207 | 7 | 1 | 619 | 1 | 625 | 0.0 | 798 |
| MS.gene47296.t1 | AT5G36940 | 62.314 | 605 | 219 | 4 | 22 | 623 | 5 | 603 | 0.0 | 747 |
| MS.gene47296.t1 | AT3G03720 | 59.764 | 594 | 223 | 5 | 24 | 612 | 4 | 586 | 0.0 | 716 |
| MS.gene47296.t1 | AT4G21120 | 34.878 | 410 | 248 | 4 | 22 | 425 | 48 | 444 | 9.80e-76 | 253 |
| MS.gene47296.t1 | AT1G05940 | 36.195 | 431 | 250 | 9 | 31 | 450 | 35 | 451 | 1.84e-75 | 250 |
| MS.gene47296.t1 | AT1G05940 | 36.195 | 431 | 250 | 9 | 31 | 450 | 35 | 451 | 4.74e-75 | 249 |
| MS.gene47296.t1 | AT1G05940 | 36.195 | 431 | 250 | 9 | 31 | 450 | 35 | 451 | 1.95e-74 | 249 |
| MS.gene47296.t1 | AT5G04770 | 33.656 | 413 | 264 | 4 | 24 | 427 | 32 | 443 | 2.42e-68 | 233 |
| MS.gene47296.t1 | AT2G34960 | 32.477 | 428 | 262 | 8 | 9 | 425 | 26 | 437 | 1.77e-66 | 228 |
| MS.gene47296.t1 | AT3G10600 | 33.738 | 412 | 260 | 4 | 41 | 444 | 53 | 459 | 9.23e-66 | 226 |
| MS.gene47296.t1 | AT1G17120 | 30.198 | 404 | 275 | 3 | 22 | 425 | 59 | 455 | 5.70e-59 | 208 |
| MS.gene47296.t1 | AT5G04770 | 33.152 | 368 | 236 | 4 | 24 | 382 | 32 | 398 | 3.53e-58 | 201 |
| MS.gene47296.t1 | AT1G05940 | 33.033 | 333 | 197 | 7 | 116 | 438 | 2 | 318 | 6.61e-49 | 177 |
| MS.gene47296.t1 | AT4G21120 | 33.667 | 300 | 180 | 4 | 132 | 425 | 8 | 294 | 1.89e-48 | 176 |
| MS.gene47296.t1 | AT3G10600 | 31.447 | 318 | 205 | 4 | 135 | 444 | 1 | 313 | 3.12e-47 | 172 |
| MS.gene47296.t1 | AT5G04770 | 32.660 | 297 | 195 | 3 | 135 | 427 | 1 | 296 | 1.00e-43 | 162 |
Find 149 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTACCACTTTCATTTA+TGG | 0.100438 | 6.4:-2830949 | MS.gene47296:CDS |
| CATAGTAGCTGGTGGTTATT+TGG | 0.112345 | 6.4:-2829959 | MS.gene47296:CDS |
| AGACCCACTTTCAGCATTTA+TGG | 0.145906 | 6.4:-2830183 | MS.gene47296:CDS |
| TTTGATTAGGCTGCACTTAT+TGG | 0.215260 | 6.4:-2830269 | MS.gene47296:intron |
| GATTACGACTGTACCAAATT+AGG | 0.216213 | 6.4:+2830625 | None:intergenic |
| ATGGATGTCTCTCAACTTGC+TGG | 0.260048 | 6.4:-2828509 | MS.gene47296:CDS |
| CCACTTTCATTTATGGTTGC+TGG | 0.262547 | 6.4:-2830942 | MS.gene47296:CDS |
| GCCATCGCCATCAAAATTCT+TGG | 0.283000 | 6.4:+2828641 | None:intergenic |
| GTAACTATGGTACTCTTTAC+AGG | 0.292872 | 6.4:+2828563 | None:intergenic |
| GATTGGGTGGTCCTTAATAT+TGG | 0.298884 | 6.4:-2830689 | MS.gene47296:CDS |
| TGCAGGGTTTCTTGGTTGAT+TGG | 0.301363 | 6.4:-2830706 | MS.gene47296:intron |
| TCGTGGCATCACCCCTAATT+TGG | 0.301503 | 6.4:-2830638 | MS.gene47296:intron |
| AACACCATATTCCAATATTA+AGG | 0.309843 | 6.4:+2830678 | None:intergenic |
| GTTATTATTTACGTGTTCTA+TGG | 0.316306 | 6.4:-2826795 | MS.gene47296:CDS |
| GTTAACTGTTCCTCATCTTA+TGG | 0.319574 | 6.4:-2831849 | MS.gene47296:CDS |
| TCACAAGAAGGTAGTGATTA+TGG | 0.325301 | 6.4:-2831974 | MS.gene47296:CDS |
| ATAATGTTTGCAGGGTTTCT+TGG | 0.327491 | 6.4:-2830714 | MS.gene47296:intron |
| TCCTATTTACTTATTAGTCT+TGG | 0.330813 | 6.4:-2827226 | MS.gene47296:CDS |
| CCCAAGACTAATAAGTAAAT+AGG | 0.331225 | 6.4:+2827225 | None:intergenic |
| ATAGTATCCATTGTTGTTGT+TGG | 0.341490 | 6.4:-2829107 | MS.gene47296:CDS |
| AACTGCAAAAGCAGAAGATA+TGG | 0.346384 | 6.4:+2829049 | None:intergenic |
| CAGATGTACATAATGATAAT+AGG | 0.346961 | 6.4:-2827762 | MS.gene47296:CDS |
| GCAGGGTTTCTTGGTTGATT+GGG | 0.347507 | 6.4:-2830705 | MS.gene47296:intron |
| AAGAAGGTTGATTCTAATGT+TGG | 0.348906 | 6.4:-2831908 | MS.gene47296:CDS |
| ATTACGACTGTACCAAATTA+GGG | 0.350770 | 6.4:+2830626 | None:intergenic |
| GCTTGTATAATTAAGCAATA+AGG | 0.356117 | 6.4:+2826694 | None:intergenic |
| TCTGTTAGATTTACATTATG+TGG | 0.359468 | 6.4:-2827547 | MS.gene47296:CDS |
| TTGATAAGAATGCAAATTAT+AGG | 0.363316 | 6.4:+2827250 | None:intergenic |
| CCTATTTACTTATTAGTCTT+GGG | 0.366053 | 6.4:-2827225 | MS.gene47296:intron |
| CCTCAAAGAGATTTGCCAAT+TGG | 0.371631 | 6.4:-2829170 | MS.gene47296:CDS |
| GACAAATACGCCTAAACATA+TGG | 0.373226 | 6.4:+2827711 | None:intergenic |
| ATAGTAGCTGGTGGTTATTT+GGG | 0.375685 | 6.4:-2829958 | MS.gene47296:CDS |
| TATCCTATCAACATATTCCT+TGG | 0.375880 | 6.4:-2830220 | MS.gene47296:CDS |
| CCAATTGGCAAATCTCTTTG+AGG | 0.382184 | 6.4:+2829170 | None:intergenic |
| GGATTCAAAACTGGATGGAT+TGG | 0.383019 | 6.4:-2829937 | MS.gene47296:CDS |
| GTAAAGAGTACCATAGTTAC+TGG | 0.385314 | 6.4:-2828560 | MS.gene47296:CDS |
| GGTTATTTGGGATTCAAAAC+TGG | 0.389451 | 6.4:-2829946 | MS.gene47296:CDS |
| GTTCCTCATCTTATGGCAAT+TGG | 0.391075 | 6.4:-2831842 | MS.gene47296:intron |
| CATCTTGATCTATACATGTT+AGG | 0.395167 | 6.4:+2827488 | None:intergenic |
| TACAGATACATTATAAATGC+TGG | 0.401124 | 6.4:-2828837 | MS.gene47296:intron |
| TGGTCCTTAATATTGGAATA+TGG | 0.409863 | 6.4:-2830682 | MS.gene47296:CDS |
| TGGCCTTGTTTCTGCCGCCT+TGG | 0.410465 | 6.4:-2828540 | MS.gene47296:CDS |
| GATCCAAGGAATATGTTGAT+AGG | 0.414791 | 6.4:+2830217 | None:intergenic |
| GGAGTAGATGGAATGGTTGC+TGG | 0.415004 | 6.4:-2829792 | MS.gene47296:CDS |
| CTTCTTCAACATATCTTCTC+AGG | 0.415017 | 6.4:-2827675 | MS.gene47296:intron |
| AGCTCTTTGTTATGCTGAGT+TGG | 0.418949 | 6.4:-2830901 | MS.gene47296:CDS |
| AAGTCCTCTTTGACAAGTAA+AGG | 0.423678 | 6.4:+2828162 | None:intergenic |
| ATCAATTGATTCAGAGTCAA+TGG | 0.425230 | 6.4:-2828235 | MS.gene47296:CDS |
| TTCAGGTTTCATATGTCCAC+TGG | 0.430642 | 6.4:-2827284 | MS.gene47296:intron |
| AGAAACAAGGCCAGTAACTA+TGG | 0.438605 | 6.4:+2828550 | None:intergenic |
| GACAAGGTTCATCATGTTCA+TGG | 0.447931 | 6.4:-2831949 | MS.gene47296:CDS |
| ATTGGATATAAACTCCCAAC+AGG | 0.449772 | 6.4:-2829919 | MS.gene47296:CDS |
| AAGCTGTAAATTACCCTGTT+GGG | 0.450799 | 6.4:+2829905 | None:intergenic |
| TGCAAGATGTTTAGCAAGAA+GGG | 0.453284 | 6.4:+2828125 | None:intergenic |
| CACTATGCTTACATATGTCT+TGG | 0.453471 | 6.4:-2830846 | MS.gene47296:CDS |
| GATTAGGCTGCACTTATTGG+AGG | 0.455919 | 6.4:-2830266 | MS.gene47296:intron |
| TCAGGTGTTGGTGCAACAAT+TGG | 0.456854 | 6.4:-2831023 | MS.gene47296:intron |
| GTATCTGTATGGCTAGCAAT+AGG | 0.461247 | 6.4:-2826819 | MS.gene47296:CDS |
| AGAAGGTTGATTCTAATGTT+GGG | 0.470342 | 6.4:-2831907 | MS.gene47296:CDS |
| TGCAGTTAATGGAATGCAAT+GGG | 0.470973 | 6.4:-2829033 | MS.gene47296:CDS |
| TGTTGATAGGATAAAACTCT+TGG | 0.475146 | 6.4:+2830230 | None:intergenic |
| AATTAAGCAATAAGGCTTGT+GGG | 0.476972 | 6.4:+2826702 | None:intergenic |
| TTGAAGAAGCTGCAAATGTA+AGG | 0.480989 | 6.4:+2827689 | None:intergenic |
| GTAATAGCATCCATATGTTT+AGG | 0.489669 | 6.4:-2827721 | MS.gene47296:CDS |
| AATGAAGCTGCAATTCCAAT+TGG | 0.492493 | 6.4:+2829155 | None:intergenic |
| TTGCAAGATGTTTAGCAAGA+AGG | 0.492860 | 6.4:+2828124 | None:intergenic |
| TGGTACTCTTTACAGGAACT+TGG | 0.493155 | 6.4:+2828570 | None:intergenic |
| TTGATGTTTATCATAGTAGC+TGG | 0.493185 | 6.4:-2829970 | MS.gene47296:CDS |
| CAACACAGATATTGATGCTA+TGG | 0.494756 | 6.4:+2828290 | None:intergenic |
| ATAAATGAAAGTGGTAAAGC+TGG | 0.496991 | 6.4:+2830951 | None:intergenic |
| GATGATGCAAGACACAACTT+TGG | 0.497281 | 6.4:-2827469 | MS.gene47296:CDS |
| ACTGCAAAAGCAGAAGATAT+GGG | 0.497820 | 6.4:+2829050 | None:intergenic |
| CAATTGATTCTTGTAGAGAA+GGG | 0.498201 | 6.4:+2828250 | None:intergenic |
| GTTGGGAACAATAACTCTCA+TGG | 0.498357 | 6.4:-2831890 | MS.gene47296:CDS |
| ACAGATACATTATAAATGCT+GGG | 0.498551 | 6.4:-2828836 | MS.gene47296:intron |
| GCTTCATTGTCTCTATGTTG+TGG | 0.500066 | 6.4:-2829140 | MS.gene47296:CDS |
| ATGATGCAAGACACAACTTT+GGG | 0.502430 | 6.4:-2827468 | MS.gene47296:CDS |
| GGGTTTCTTGGTTGATTGGG+TGG | 0.502999 | 6.4:-2830702 | MS.gene47296:CDS |
| TCAATTGATTCTTGTAGAGA+AGG | 0.504846 | 6.4:+2828249 | None:intergenic |
| TCATGGGGTGCAACTTGCTA+AGG | 0.508461 | 6.4:-2831873 | MS.gene47296:CDS |
| TTTACATTATGTGGAGTTGG+TGG | 0.511270 | 6.4:-2827538 | MS.gene47296:CDS |
| CAGAGTCAATGGAGTGTGGT+TGG | 0.511650 | 6.4:-2828224 | MS.gene47296:CDS |
| AGTTGCTAGCGCTGCTGAAG+AGG | 0.513006 | 6.4:-2829730 | MS.gene47296:intron |
| CATAGCTCTCTAAAAGATGC+AGG | 0.514790 | 6.4:-2826765 | MS.gene47296:CDS |
| AGATTTACATTATGTGGAGT+TGG | 0.517238 | 6.4:-2827541 | MS.gene47296:CDS |
| TGGATGTCTCTCAACTTGCT+GGG | 0.518842 | 6.4:-2828508 | MS.gene47296:CDS |
| AATACCATAAATGCTGAAAG+TGG | 0.520817 | 6.4:+2830179 | None:intergenic |
| AAAGCTGTAAATTACCCTGT+TGG | 0.522561 | 6.4:+2829904 | None:intergenic |
| GAAACCTTTACTTGTCAAAG+AGG | 0.525058 | 6.4:-2828166 | MS.gene47296:CDS |
| GGGTTTGTTGATTCACAAGA+AGG | 0.526741 | 6.4:-2831986 | MS.gene47296:CDS |
| TTGGGAACAATAACTCTCAT+GGG | 0.527394 | 6.4:-2831889 | MS.gene47296:CDS |
| TTAATATTGGAATATGGTGT+TGG | 0.534246 | 6.4:-2830676 | MS.gene47296:CDS |
| AGACACAACTTTGGGAACAC+TGG | 0.534267 | 6.4:-2827460 | MS.gene47296:CDS |
| GGAGTGTGGTTGGAGCCATT+TGG | 0.534892 | 6.4:-2828214 | MS.gene47296:CDS |
| CCAGCAACCATAAATGAAAG+TGG | 0.535430 | 6.4:+2830942 | None:intergenic |
| TTGCAGTTAATGGAATGCAA+TGG | 0.536583 | 6.4:-2829034 | MS.gene47296:CDS |
| TTGGGATTGATATCATAGTA+AGG | 0.538762 | 6.4:+2829077 | None:intergenic |
| ATGCCAAGGCGGCAGAAACA+AGG | 0.539317 | 6.4:+2828537 | None:intergenic |
| CTTGGTTGCGAGTATCTGTA+TGG | 0.540744 | 6.4:-2826830 | MS.gene47296:CDS |
| GCACTATGCTCATCATTGCT+TGG | 0.550860 | 6.4:-2828804 | MS.gene47296:CDS |
| TGTCTCTCAACTTGCTGGGA+TGG | 0.551677 | 6.4:-2828504 | MS.gene47296:intron |
| CTTACATATGTCTTGGTGAA+GGG | 0.552617 | 6.4:-2830839 | MS.gene47296:intron |
| ATTTGGGATTCAAAACTGGA+TGG | 0.559171 | 6.4:-2829942 | MS.gene47296:CDS |
| GCTGGTGTATATGTTCTAGT+TGG | 0.560070 | 6.4:-2830999 | MS.gene47296:CDS |
| TGCATTCGGAGTAGATGGAA+TGG | 0.560540 | 6.4:-2829799 | MS.gene47296:CDS |
| CTATGCTCATCATTGCTTGG+TGG | 0.561910 | 6.4:-2828801 | MS.gene47296:CDS |
| TGTGTTCTACAGGTTAGTGT+AGG | 0.563452 | 6.4:-2828330 | MS.gene47296:intron |
| GATCCTGTGTACTGGCATCA+AGG | 0.564750 | 6.4:-2830144 | MS.gene47296:CDS |
| ATATTGGAATATGGTGTTGG+TGG | 0.569705 | 6.4:-2830673 | MS.gene47296:CDS |
| CTGCAAAAGCAGAAGATATG+GGG | 0.570459 | 6.4:+2829051 | None:intergenic |
| GTTACGTGGATCCTGTGTAC+TGG | 0.570533 | 6.4:-2830152 | MS.gene47296:CDS |
| TTCTAGTTGGAACTGTAGCA+AGG | 0.571439 | 6.4:-2830986 | MS.gene47296:CDS |
| TACTAAACCAACAACAACAA+TGG | 0.573713 | 6.4:+2829100 | None:intergenic |
| GATGCAGGTTATGTGAAGGC+TGG | 0.574445 | 6.4:-2826750 | MS.gene47296:CDS |
| TAATTAAGCAATAAGGCTTG+TGG | 0.574455 | 6.4:+2826701 | None:intergenic |
| ATTAAGCAATAAGGCTTGTG+GGG | 0.576299 | 6.4:+2826703 | None:intergenic |
| TGATAAGCACTTCCAGCAGA+AGG | 0.576548 | 6.4:+2830867 | None:intergenic |
| AATTGATTCTTGTAGAGAAG+GGG | 0.578128 | 6.4:+2828251 | None:intergenic |
| ATGCAAATTATAGGCAGTAG+AGG | 0.584708 | 6.4:+2827259 | None:intergenic |
| GCTTACATATGTCTTGGTGA+AGG | 0.586282 | 6.4:-2830840 | MS.gene47296:CDS |
| GGTGGAGCTGCTGTTGCTCG+TGG | 0.586754 | 6.4:-2830655 | MS.gene47296:CDS |
| TTGATGGCGATGGCAAGGGA+TGG | 0.589991 | 6.4:-2828632 | MS.gene47296:CDS |
| ATGTTTATCATAGTAGCTGG+TGG | 0.598210 | 6.4:-2829967 | MS.gene47296:CDS |
| GTTGGTGCAACAATTGGAGC+TGG | 0.600425 | 6.4:-2831017 | MS.gene47296:CDS |
| GCAAGATGTTTAGCAAGAAG+GGG | 0.601483 | 6.4:+2828126 | None:intergenic |
| ATACCATAAATGCTGAAAGT+GGG | 0.609991 | 6.4:+2830180 | None:intergenic |
| AAAAGATGCAGGTTATGTGA+AGG | 0.610067 | 6.4:-2826754 | MS.gene47296:CDS |
| GGTAGTGATTATGGTGGACA+AGG | 0.611186 | 6.4:-2831965 | MS.gene47296:CDS |
| TACTTTGTATGCAGAGTACG+AGG | 0.613957 | 6.4:-2830029 | MS.gene47296:intron |
| CCTCCTTGATGCCAGTACAC+AGG | 0.615886 | 6.4:+2830141 | None:intergenic |
| GCTTGGTGGAATGTTGCCAC+AGG | 0.621335 | 6.4:-2828787 | MS.gene47296:intron |
| TTACCAATTGCCATAAGATG+AGG | 0.621861 | 6.4:+2831839 | None:intergenic |
| ATTGATTCTTGTAGAGAAGG+GGG | 0.623850 | 6.4:+2828252 | None:intergenic |
| TTATGGTATTGATCGTTACG+TGG | 0.624385 | 6.4:-2830166 | MS.gene47296:CDS |
| TCTACATCAATATCGATCCA+AGG | 0.628163 | 6.4:+2830203 | None:intergenic |
| ACTGTAGCAAGGGAACATGC+TGG | 0.630358 | 6.4:-2830975 | MS.gene47296:CDS |
| TCTAGTTGGAACTGTAGCAA+GGG | 0.631841 | 6.4:-2830985 | MS.gene47296:CDS |
| CACAACTTTGGGAACACTGG+AGG | 0.641781 | 6.4:-2827457 | MS.gene47296:intron |
| CAGATACATTATAAATGCTG+GGG | 0.645816 | 6.4:-2828835 | MS.gene47296:CDS |
| TGCAAAAGCAGAAGATATGG+GGG | 0.661631 | 6.4:+2829052 | None:intergenic |
| ATAGGCAGTAGAGGCACCAG+TGG | 0.674521 | 6.4:+2827268 | None:intergenic |
| TTACGACTGTACCAAATTAG+GGG | 0.682560 | 6.4:+2830627 | None:intergenic |
| AAGGTTCATCATGTTCATGG+AGG | 0.683985 | 6.4:-2831946 | MS.gene47296:CDS |
| CAAGAAGGTAGTGATTATGG+TGG | 0.685074 | 6.4:-2831971 | MS.gene47296:CDS |
| GATTCAGAGTCAATGGAGTG+TGG | 0.689126 | 6.4:-2828228 | MS.gene47296:CDS |
| TTAAGCAATAAGGCTTGTGG+GGG | 0.692561 | 6.4:+2826704 | None:intergenic |
| TTGGATATAAACTCCCAACA+GGG | 0.706317 | 6.4:-2829918 | MS.gene47296:intron |
| TGGGAACAATAACTCTCATG+GGG | 0.710428 | 6.4:-2831888 | MS.gene47296:CDS |
| CCTGTGTACTGGCATCAAGG+AGG | 0.729321 | 6.4:-2830141 | MS.gene47296:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTTGTATTATATTATATTT+GGG | - | chr6.4:2827603-2827622 | MS.gene47296:intron | 10.0% |
| !! | AATTAAAATATTCAAGTCAA+AGG | + | chr6.4:2827578-2827597 | None:intergenic | 15.0% |
| !! | AGATTAATATTTCTTTGATT+AGG | - | chr6.4:2828411-2828430 | MS.gene47296:intron | 15.0% |
| !! | ATTAAAATATTCAAGTCAAA+GGG | + | chr6.4:2827577-2827596 | None:intergenic | 15.0% |
| !! | ATTTACTTCAAAATTGAATA+TGG | + | chr6.4:2831501-2831520 | None:intergenic | 15.0% |
| !! | GCTTTGTATTATATTATATT+TGG | - | chr6.4:2827602-2827621 | MS.gene47296:intron | 15.0% |
| !! | TCTCCATTTATAAAAATAAA+TGG | + | chr6.4:2827295-2827314 | None:intergenic | 15.0% |
| !! | TTATAGTAAAGTGTATAATA+TGG | + | chr6.4:2831063-2831082 | None:intergenic | 15.0% |
| !! | TTATTTATGTCAGAAAAAAA+TGG | + | chr6.4:2830097-2830116 | None:intergenic | 15.0% |
| !!! | ATTCTATGTAATTTCTTTTT+AGG | - | chr6.4:2830849-2830868 | MS.gene47296:CDS | 15.0% |
| !!! | ATTTATTTTTATAAATGGAG+AGG | - | chr6.4:2827294-2827313 | MS.gene47296:intron | 15.0% |
| !!! | CTTCCATTTATTTTTATAAA+TGG | - | chr6.4:2827289-2827308 | MS.gene47296:intron | 15.0% |
| !!! | GTTTTTCCTTTATTTAATTT+TGG | - | chr6.4:2827646-2827665 | MS.gene47296:intron | 15.0% |
| !!! | TATTTTTATTTCAATACAGT+TGG | + | chr6.4:2831372-2831391 | None:intergenic | 15.0% |
| !!! | TGTGTTTTTTTTTTTTTGAA+GGG | - | chr6.4:2831834-2831853 | MS.gene47296:intron | 15.0% |
| !!! | TTAAATATTTTTAACTGACA+GGG | - | chr6.4:2827446-2827465 | MS.gene47296:intron | 15.0% |
| !! | AAGTAAAAAGTAATTGATGA+TGG | - | chr6.4:2827077-2827096 | MS.gene47296:intron | 20.0% |
| !! | ACTTATATAATTAGATGTAG+CGG | + | chr6.4:2830739-2830758 | None:intergenic | 20.0% |
| !! | TGACATATGTCAAATAATAA+AGG | + | chr6.4:2830880-2830899 | None:intergenic | 20.0% |
| !! | TTCTTCTTAGTGTATTAAAT+TGG | - | chr6.4:2829752-2829771 | MS.gene47296:CDS | 20.0% |
| !! | TTGATAAGAATGCAAATTAT+AGG | + | chr6.4:2831446-2831465 | None:intergenic | 20.0% |
| !!! | AATTATAGGTATTTTGCATT+CGG | - | chr6.4:2828880-2828899 | MS.gene47296:intron | 20.0% |
| !!! | ATGTCTCTTGTTTTAATTAT+AGG | - | chr6.4:2828866-2828885 | MS.gene47296:intron | 20.0% |
| !!! | GTGTGTTTTTTTTTTTTTGA+AGG | - | chr6.4:2831833-2831852 | MS.gene47296:intron | 20.0% |
| !!! | GTGTTTTTTTTTTTTTGAAG+GGG | - | chr6.4:2831835-2831854 | MS.gene47296:intron | 20.0% |
| !!! | GTTAAATATTTTTAACTGAC+AGG | - | chr6.4:2827445-2827464 | MS.gene47296:intron | 20.0% |
| !!! | TACTTAGAAAATGGTATTTT+AGG | + | chr6.4:2829799-2829818 | None:intergenic | 20.0% |
| !!! | TTCAATCATTTTTTTCATCT+GGG | - | chr6.4:2826926-2826945 | MS.gene47296:intron | 20.0% |
| !!! | TTCTTTTCTTGTTTGAATTT+TGG | - | chr6.4:2827520-2827539 | MS.gene47296:CDS | 20.0% |
| !!! | TTTCAATCATTTTTTTCATC+TGG | - | chr6.4:2826925-2826944 | MS.gene47296:intron | 20.0% |
| !!! | TTTTAGTGATGTTATTTAAC+TGG | - | chr6.4:2827490-2827509 | MS.gene47296:CDS | 20.0% |
| ! | AAAACCTATGTATGCAAAAA+AGG | + | chr6.4:2828938-2828957 | None:intergenic | 25.0% |
| ! | AACACCATATTCCAATATTA+AGG | + | chr6.4:2828018-2828037 | None:intergenic | 25.0% |
| ! | ACACTATTAGAAAGTTTGAA+TGG | + | chr6.4:2829476-2829495 | None:intergenic | 25.0% |
| ! | ACAGATACATTATAAATGCT+GGG | - | chr6.4:2829857-2829876 | MS.gene47296:intron | 25.0% |
| ! | ACTAATGCATACTTAGAAAA+TGG | + | chr6.4:2829808-2829827 | None:intergenic | 25.0% |
| ! | AGAAAATAGAAGACTTTCAA+AGG | + | chr6.4:2829993-2830012 | None:intergenic | 25.0% |
| ! | ATAGAGACATAAAATAGTAG+TGG | + | chr6.4:2827126-2827145 | None:intergenic | 25.0% |
| ! | ATATCTGTGTTAAAACTTGT+TGG | - | chr6.4:2830313-2830332 | MS.gene47296:intron | 25.0% |
| ! | CAACATTTAGAAAAGTGAAA+AGG | + | chr6.4:2826999-2827018 | None:intergenic | 25.0% |
| ! | CAGATCATAATAATGTATCA+AGG | - | chr6.4:2828988-2829007 | MS.gene47296:intron | 25.0% |
| ! | CAGATGTACATAATGATAAT+AGG | - | chr6.4:2830931-2830950 | MS.gene47296:CDS | 25.0% |
| ! | CATCATGATATTTGTAGTAT+TGG | - | chr6.4:2831313-2831332 | MS.gene47296:intron | 25.0% |
| ! | CCTGAACCAAAATTAAATAA+AGG | + | chr6.4:2827655-2827674 | None:intergenic | 25.0% |
| ! | CTATTTAGACCTATAAAACA+CGG | + | chr6.4:2831681-2831700 | None:intergenic | 25.0% |
| ! | GAAAATAGAAGACTTTCAAA+GGG | + | chr6.4:2829992-2830011 | None:intergenic | 25.0% |
| ! | GATAATAGGAGAAAAATTGT+TGG | - | chr6.4:2830945-2830964 | MS.gene47296:CDS | 25.0% |
| ! | GTTATTATTTACGTGTTCTA+TGG | - | chr6.4:2831898-2831917 | MS.gene47296:CDS | 25.0% |
| ! | TAATAATGTATCAAGGAACT+TGG | - | chr6.4:2828995-2829014 | MS.gene47296:intron | 25.0% |
| ! | TACAGATACATTATAAATGC+TGG | - | chr6.4:2829856-2829875 | MS.gene47296:intron | 25.0% |
| ! | TAGAGACATAAAATAGTAGT+GGG | + | chr6.4:2827125-2827144 | None:intergenic | 25.0% |
| ! | TATAGTTTCTTACATTACGT+CGG | - | chr6.4:2827903-2827922 | MS.gene47296:intron | 25.0% |
| ! | TCTGTTAGATTTACATTATG+TGG | - | chr6.4:2831146-2831165 | MS.gene47296:intron | 25.0% |
| ! | TTAATATTGGAATATGGTGT+TGG | - | chr6.4:2828017-2828036 | MS.gene47296:intron | 25.0% |
| ! | TTTATGTCAGAAAAAAATGG+TGG | + | chr6.4:2830094-2830113 | None:intergenic | 25.0% |
| !! | ATTTTGTGTATAATGTTTGC+AGG | - | chr6.4:2827970-2827989 | MS.gene47296:intron | 25.0% |
| !! | GATGTTATTTAACTGGTTTA+AGG | - | chr6.4:2827497-2827516 | MS.gene47296:CDS | 25.0% |
| !! | TCCTATTTACTTATTAGTCT+TGG | - | chr6.4:2831467-2831486 | MS.gene47296:intron | 25.0% |
| !! | TGTATCAATGTTTTCAAAAC+CGG | - | chr6.4:2829128-2829147 | MS.gene47296:CDS | 25.0% |
| !! | TTGAAAGTCTTCTATTTTCT+AGG | - | chr6.4:2829993-2830012 | MS.gene47296:CDS | 25.0% |
| !! | TTTTGTGTATAATGTTTGCA+GGG | - | chr6.4:2827971-2827990 | MS.gene47296:intron | 25.0% |
| !!! | AAAAAGTAATTGATGATGGT+GGG | - | chr6.4:2827081-2827100 | MS.gene47296:intron | 25.0% |
| !!! | ACTCTTATTGATTTGTTTTC+AGG | - | chr6.4:2831392-2831411 | MS.gene47296:intron | 25.0% |
| !!! | AGGAGTATTTATACACAAAA+TGG | + | chr6.4:2829779-2829798 | None:intergenic | 25.0% |
| !!! | AGTAACATTTTTTTTGCCTT+AGG | + | chr6.4:2830270-2830289 | None:intergenic | 25.0% |
| !!! | CACTTTTCTAAATGTTGTTT+TGG | - | chr6.4:2827002-2827021 | MS.gene47296:intron | 25.0% |
| !!! | CCTATTTACTTATTAGTCTT+GGG | - | chr6.4:2831468-2831487 | MS.gene47296:intron | 25.0% |
| !!! | CCTTTATTTAATTTTGGTTC+AGG | - | chr6.4:2827652-2827671 | MS.gene47296:intron | 25.0% |
| !!! | GGTATGGTTTACATTTTTTA+TGG | - | chr6.4:2831257-2831276 | MS.gene47296:intron | 25.0% |
| !!! | TAAAAAGTAATTGATGATGG+TGG | - | chr6.4:2827080-2827099 | MS.gene47296:intron | 25.0% |
| !!! | TATTTTTAGTGTTAACTCTC+CGG | - | chr6.4:2827340-2827359 | MS.gene47296:intron | 25.0% |
| !!! | TCTGAAATTTTGAATTCTGT+TGG | - | chr6.4:2828116-2828135 | MS.gene47296:CDS | 25.0% |
| AAAAATTTACACCTTTCCAC+AGG | + | chr6.4:2827369-2827388 | None:intergenic | 30.0% | |
| AATACCATAAATGCTGAAAG+TGG | + | chr6.4:2828517-2828536 | None:intergenic | 30.0% | |
| AATTGCATCTTCCATTTATG+TGG | - | chr6.4:2827155-2827174 | MS.gene47296:intron | 30.0% | |
| AGATTTACATTATGTGGAGT+TGG | - | chr6.4:2831152-2831171 | MS.gene47296:intron | 30.0% | |
| AGCTTTACCACTTTCATTTA+TGG | - | chr6.4:2827744-2827763 | MS.gene47296:CDS | 30.0% | |
| ATAAATGAAAGTGGTAAAGC+TGG | + | chr6.4:2827745-2827764 | None:intergenic | 30.0% | |
| ATAACATCTGTTGTTACCTA+AGG | - | chr6.4:2830251-2830270 | MS.gene47296:CDS | 30.0% | |
| ATACCATAAATGCTGAAAGT+GGG | + | chr6.4:2828516-2828535 | None:intergenic | 30.0% | |
| ATAGTTTCTTACATTACGTC+GGG | - | chr6.4:2827904-2827923 | MS.gene47296:intron | 30.0% | |
| ATCCATAAAAAATAGGAGTG+AGG | + | chr6.4:2830910-2830929 | None:intergenic | 30.0% | |
| ATCTTCTCAGGTAAATTTAG+AGG | - | chr6.4:2831030-2831049 | MS.gene47296:intron | 30.0% | |
| ATTACGACTGTACCAAATTA+GGG | + | chr6.4:2828070-2828089 | None:intergenic | 30.0% | |
| ATTCTCTCTAGTGTCTATTT+AGG | - | chr6.4:2827230-2827249 | MS.gene47296:CDS | 30.0% | |
| ATTGCATCTTCCATTTATGT+GGG | - | chr6.4:2827156-2827175 | MS.gene47296:intron | 30.0% | |
| CAAATAGCGAAAAAGAGATA+TGG | - | chr6.4:2831559-2831578 | MS.gene47296:intron | 30.0% | |
| CAGATACATTATAAATGCTG+GGG | - | chr6.4:2829858-2829877 | MS.gene47296:intron | 30.0% | |
| CATCTGCATCCATAAAAAAT+AGG | + | chr6.4:2830917-2830936 | None:intergenic | 30.0% | |
| CATCTTGATCTATACATGTT+AGG | + | chr6.4:2831208-2831227 | None:intergenic | 30.0% | |
| CCCAAGACTAATAAGTAAAT+AGG | + | chr6.4:2831471-2831490 | None:intergenic | 30.0% | |
| GTAATAGCATCCATATGTTT+AGG | - | chr6.4:2830972-2830991 | MS.gene47296:CDS | 30.0% | |
| TACTAAACCAACAACAACAA+TGG | + | chr6.4:2829596-2829615 | None:intergenic | 30.0% | |
| TATACAATATTGCGAAACAG+CGG | - | chr6.4:2828243-2828262 | MS.gene47296:CDS | 30.0% | |
| TATCCTATCAACATATTCCT+TGG | - | chr6.4:2828473-2828492 | MS.gene47296:intron | 30.0% | |
| TCAACTTCACAAAATTGACT+TGG | + | chr6.4:2831775-2831794 | None:intergenic | 30.0% | |
| TCTAGGAAAGATTATTGATG+TGG | - | chr6.4:2830010-2830029 | MS.gene47296:CDS | 30.0% | |
| TCTTCTCAGGTAAATTTAGA+GGG | - | chr6.4:2831031-2831050 | MS.gene47296:intron | 30.0% | |
| TGGTCCTTAATATTGGAATA+TGG | - | chr6.4:2828011-2828030 | MS.gene47296:intron | 30.0% | |
| TTAGAAAGTTTGAATGGCAA+TGG | + | chr6.4:2829470-2829489 | None:intergenic | 30.0% | |
| TTGATGTTTATCATAGTAGC+TGG | - | chr6.4:2828723-2828742 | MS.gene47296:intron | 30.0% | |
| TTGGGATTGATATCATAGTA+AGG | + | chr6.4:2829619-2829638 | None:intergenic | 30.0% | |
| ! | AAGAAGGTTGATTCTAATGT+TGG | - | chr6.4:2826785-2826804 | MS.gene47296:CDS | 30.0% |
| ! | AAGAGACATGTAATTGATTC+TGG | + | chr6.4:2827408-2827427 | None:intergenic | 30.0% |
| ! | AATTGATTCTTGTAGAGAAG+GGG | + | chr6.4:2830445-2830464 | None:intergenic | 30.0% |
| ! | AGAAGGTTGATTCTAATGTT+GGG | - | chr6.4:2826786-2826805 | MS.gene47296:CDS | 30.0% |
| ! | ATAGTATCCATTGTTGTTGT+TGG | - | chr6.4:2829586-2829605 | MS.gene47296:intron | 30.0% |
| ! | ATCAATTGATTCAGAGTCAA+TGG | - | chr6.4:2830458-2830477 | MS.gene47296:intron | 30.0% |
| ! | CAATTGATTCTTGTAGAGAA+GGG | + | chr6.4:2830446-2830465 | None:intergenic | 30.0% |
| ! | CTTTTAGATTGATCACCAAA+TGG | + | chr6.4:2830497-2830516 | None:intergenic | 30.0% |
| ! | GTGTTTTACTTTGATCTAAC+AGG | - | chr6.4:2829492-2829511 | MS.gene47296:intron | 30.0% |
| ! | TCAATTGATTCTTGTAGAGA+AGG | + | chr6.4:2830447-2830466 | None:intergenic | 30.0% |
| ! | TGTTGATAGGATAAAACTCT+TGG | + | chr6.4:2828466-2828485 | None:intergenic | 30.0% |
| !! | AGTTTTGACAATTGCACATA+TGG | + | chr6.4:2830225-2830244 | None:intergenic | 30.0% |
| !! | GTTTTTGACTAGAAGAAAGA+AGG | - | chr6.4:2826769-2826788 | MS.gene47296:CDS | 30.0% |
| !! | TCTTCTCTGTTTCTACAATT+TGG | - | chr6.4:2827034-2827053 | MS.gene47296:intron | 30.0% |
| !!! | ATCCTCACTCCTATTTTTTA+TGG | - | chr6.4:2830905-2830924 | MS.gene47296:CDS | 30.0% |
| !!! | TTTAATTTTGGTTCAGGTGT+TGG | - | chr6.4:2827658-2827677 | MS.gene47296:intron | 30.0% |
| AAAAATAGGAGTGAGGATGA+AGG | + | chr6.4:2830903-2830922 | None:intergenic | 35.0% | |
| AAAAGATGCAGGTTATGTGA+AGG | - | chr6.4:2831939-2831958 | MS.gene47296:CDS | 35.0% | |
| AAAGCTGTAAATTACCCTGT+TGG | + | chr6.4:2828792-2828811 | None:intergenic | 35.0% | |
| AACCAAACATAGATGGATCA+AGG | + | chr6.4:2828827-2828846 | None:intergenic | 35.0% | |
| AACTGCAAAAGCAGAAGATA+TGG | + | chr6.4:2829647-2829666 | None:intergenic | 35.0% | |
| AAGCTGTAAATTACCCTGTT+GGG | + | chr6.4:2828791-2828810 | None:intergenic | 35.0% | |
| AAGTCCTCTTTGACAAGTAA+AGG | + | chr6.4:2830534-2830553 | None:intergenic | 35.0% | |
| AATGAAGCTGCAATTCCAAT+TGG | + | chr6.4:2829541-2829560 | None:intergenic | 35.0% | |
| ACCAAACATAGATGGATCAA+GGG | + | chr6.4:2828826-2828845 | None:intergenic | 35.0% | |
| ACTATGAGTCATGGTTCAAT+CGG | - | chr6.4:2829173-2829192 | MS.gene47296:CDS | 35.0% | |
| ACTGCAAAAGCAGAAGATAT+GGG | + | chr6.4:2829646-2829665 | None:intergenic | 35.0% | |
| AGTCTTACAAAACGTAGTCT+TGG | + | chr6.4:2831735-2831754 | None:intergenic | 35.0% | |
| ATAATGTTTGCAGGGTTTCT+TGG | - | chr6.4:2827979-2827998 | MS.gene47296:intron | 35.0% | |
| ATAGTAGCTGGTGGTTATTT+GGG | - | chr6.4:2828735-2828754 | MS.gene47296:intron | 35.0% | |
| ATGATGCAAGACACAACTTT+GGG | - | chr6.4:2831225-2831244 | MS.gene47296:intron | 35.0% | |
| ATGCAAATTATAGGCAGTAG+AGG | + | chr6.4:2831437-2831456 | None:intergenic | 35.0% | |
| ATGTTTATCATAGTAGCTGG+TGG | - | chr6.4:2828726-2828745 | MS.gene47296:intron | 35.0% | |
| ATTGGATATAAACTCCCAAC+AGG | - | chr6.4:2828774-2828793 | MS.gene47296:intron | 35.0% | |
| CAACACAGATATTGATGCTA+TGG | + | chr6.4:2830406-2830425 | None:intergenic | 35.0% | |
| CACTATGCTTACATATGTCT+TGG | - | chr6.4:2827847-2827866 | MS.gene47296:intron | 35.0% | |
| CTTACATATGTCTTGGTGAA+GGG | - | chr6.4:2827854-2827873 | MS.gene47296:intron | 35.0% | |
| CTTCTTCAACATATCTTCTC+AGG | - | chr6.4:2831018-2831037 | MS.gene47296:CDS | 35.0% | |
| CTTGAACAACCAAACATAGA+TGG | + | chr6.4:2828834-2828853 | None:intergenic | 35.0% | |
| GAAACCTTTACTTGTCAAAG+AGG | - | chr6.4:2830527-2830546 | MS.gene47296:intron | 35.0% | |
| GATCCAAGGAATATGTTGAT+AGG | + | chr6.4:2828479-2828498 | None:intergenic | 35.0% | |
| GATTACGACTGTACCAAATT+AGG | + | chr6.4:2828071-2828090 | None:intergenic | 35.0% | |
| GCAACAACATTTCAAGAGAT+AGG | + | chr6.4:2826896-2826915 | None:intergenic | 35.0% | |
| GTAACTATGGTACTCTTTAC+AGG | + | chr6.4:2830133-2830152 | None:intergenic | 35.0% | |
| GTTAACTGTTCCTCATCTTA+TGG | - | chr6.4:2826844-2826863 | MS.gene47296:intron | 35.0% | |
| TAGAAGACTTTCAAAGGGAA+AGG | + | chr6.4:2829987-2830006 | None:intergenic | 35.0% | |
| TAGTTTCTTACATTACGTCG+GGG | - | chr6.4:2827905-2827924 | MS.gene47296:intron | 35.0% | |
| TCACAAGAAGGTAGTGATTA+TGG | - | chr6.4:2826719-2826738 | MS.gene47296:CDS | 35.0% | |
| TCAGTCCTATTTGACCTAAA+AGG | + | chr6.4:2829021-2829040 | None:intergenic | 35.0% | |
| TCTACATCAATATCGATCCA+AGG | + | chr6.4:2828493-2828512 | None:intergenic | 35.0% | |
| TCTCTAGTGTCTATTTAGGT+GGG | - | chr6.4:2827234-2827253 | MS.gene47296:CDS | 35.0% | |
| TGCAAGATGTTTAGCAAGAA+GGG | + | chr6.4:2830571-2830590 | None:intergenic | 35.0% | |
| TGCAGTTAATGGAATGCAAT+GGG | - | chr6.4:2829660-2829679 | MS.gene47296:intron | 35.0% | |
| TTACCAATTGCCATAAGATG+AGG | + | chr6.4:2826857-2826876 | None:intergenic | 35.0% | |
| TTACGACTGTACCAAATTAG+GGG | + | chr6.4:2828069-2828088 | None:intergenic | 35.0% | |
| TTACTTTGCTTGTGTTCTAC+AGG | - | chr6.4:2830353-2830372 | MS.gene47296:intron | 35.0% | |
| TTGAAGAAGCTGCAAATGTA+AGG | + | chr6.4:2831007-2831026 | None:intergenic | 35.0% | |
| TTGCAAGATGTTTAGCAAGA+AGG | + | chr6.4:2830572-2830591 | None:intergenic | 35.0% | |
| TTGCAGTTAATGGAATGCAA+TGG | - | chr6.4:2829659-2829678 | MS.gene47296:intron | 35.0% | |
| TTGGATATAAACTCCCAACA+GGG | - | chr6.4:2828775-2828794 | MS.gene47296:intron | 35.0% | |
| TTGGGAACAATAACTCTCAT+GGG | - | chr6.4:2826804-2826823 | MS.gene47296:CDS | 35.0% | |
| TTTACATTATGTGGAGTTGG+TGG | - | chr6.4:2831155-2831174 | MS.gene47296:intron | 35.0% | |
| TTTGATTAGGCTGCACTTAT+TGG | - | chr6.4:2828424-2828443 | MS.gene47296:intron | 35.0% | |
| ! | ATATTGGAATATGGTGTTGG+TGG | - | chr6.4:2828020-2828039 | MS.gene47296:intron | 35.0% |
| ! | ATTGATTCTTGTAGAGAAGG+GGG | + | chr6.4:2830444-2830463 | None:intergenic | 35.0% |
| ! | ATTTGGGATTCAAAACTGGA+TGG | - | chr6.4:2828751-2828770 | MS.gene47296:intron | 35.0% |
| ! | GGTTATTTGGGATTCAAAAC+TGG | - | chr6.4:2828747-2828766 | MS.gene47296:intron | 35.0% |
| ! | TATTTTGCATTCGGAGTAGA+TGG | - | chr6.4:2828889-2828908 | MS.gene47296:intron | 35.0% |
| ! | TGTTACATTTTGCACAGACA+CGG | + | chr6.4:2830808-2830827 | None:intergenic | 35.0% |
| !! | GTAAAGAGTACCATAGTTAC+TGG | - | chr6.4:2830133-2830152 | MS.gene47296:intron | 35.0% |
| !! | TCTTCTGCTTTTGCAGTTAA+TGG | - | chr6.4:2829649-2829668 | MS.gene47296:intron | 35.0% |
| !! | TGCATCTTTTAGAGAGCTAT+GGG | + | chr6.4:2831929-2831948 | None:intergenic | 35.0% |
| !! | TTATGGTATTGATCGTTACG+TGG | - | chr6.4:2828527-2828546 | MS.gene47296:CDS | 35.0% |
| !!! | ACAGCCTTTTTTGCATACAT+AGG | - | chr6.4:2828931-2828950 | MS.gene47296:intron | 35.0% |
| AAGGTTCATCATGTTCATGG+AGG | - | chr6.4:2826747-2826766 | MS.gene47296:CDS | 40.0% | |
| ACCCTTGATCCATCTATGTT+TGG | - | chr6.4:2828822-2828841 | MS.gene47296:CDS | 40.0% | |
| AGAAACAAGGCCAGTAACTA+TGG | + | chr6.4:2830146-2830165 | None:intergenic | 40.0% | |
| AGACCCACTTTCAGCATTTA+TGG | - | chr6.4:2828510-2828529 | MS.gene47296:CDS | 40.0% | |
| ATACCACTAGCCCACATAAA+TGG | + | chr6.4:2827169-2827188 | None:intergenic | 40.0% | |
| ATCCATGAAAAATGCCAAGG+CGG | + | chr6.4:2830170-2830189 | None:intergenic | 40.0% | |
| CAAGAAGGTAGTGATTATGG+TGG | - | chr6.4:2826722-2826741 | MS.gene47296:CDS | 40.0% | |
| CATAGTAGCTGGTGGTTATT+TGG | - | chr6.4:2828734-2828753 | MS.gene47296:intron | 40.0% | |
| CCAATTGGCAAATCTCTTTG+AGG | + | chr6.4:2829526-2829545 | None:intergenic | 40.0% | |
| CCACTTTCATTTATGGTTGC+TGG | - | chr6.4:2827751-2827770 | MS.gene47296:CDS | 40.0% | |
| CCAGCAACCATAAATGAAAG+TGG | + | chr6.4:2827754-2827773 | None:intergenic | 40.0% | |
| CCTCAAAGAGATTTGCCAAT+TGG | - | chr6.4:2829523-2829542 | MS.gene47296:intron | 40.0% | |
| CTCTCTAGTGTCTATTTAGG+TGG | - | chr6.4:2827233-2827252 | MS.gene47296:CDS | 40.0% | |
| CTGCAAAAGCAGAAGATATG+GGG | + | chr6.4:2829645-2829664 | None:intergenic | 40.0% | |
| CTGTTACGCAACACTAGTAT+AGG | + | chr6.4:2828278-2828297 | None:intergenic | 40.0% | |
| CTTCAGATTGAAGACGTGTT+TGG | - | chr6.4:2830666-2830685 | MS.gene47296:CDS | 40.0% | |
| GACAAGGTTCATCATGTTCA+TGG | - | chr6.4:2826744-2826763 | MS.gene47296:CDS | 40.0% | |
| GACATCCATGAAAAATGCCA+AGG | + | chr6.4:2830173-2830192 | None:intergenic | 40.0% | |
| GATGATGCAAGACACAACTT+TGG | - | chr6.4:2831224-2831243 | MS.gene47296:intron | 40.0% | |
| GATTGGGTGGTCCTTAATAT+TGG | - | chr6.4:2828004-2828023 | MS.gene47296:intron | 40.0% | |
| GCAAGATGTTTAGCAAGAAG+GGG | + | chr6.4:2830570-2830589 | None:intergenic | 40.0% | |
| GCTGGTGTATATGTTCTAGT+TGG | - | chr6.4:2827694-2827713 | MS.gene47296:CDS | 40.0% | |
| GCTTACATATGTCTTGGTGA+AGG | - | chr6.4:2827853-2827872 | MS.gene47296:intron | 40.0% | |
| GCTTCATTGTCTCTATGTTG+TGG | - | chr6.4:2829553-2829572 | MS.gene47296:intron | 40.0% | |
| GGACACATCAAAAACCTTGA+CGG | - | chr6.4:2829436-2829455 | MS.gene47296:intron | 40.0% | |
| GGATTCAAAACTGGATGGAT+TGG | - | chr6.4:2828756-2828775 | MS.gene47296:intron | 40.0% | |
| GTATCTGTATGGCTAGCAAT+AGG | - | chr6.4:2831874-2831893 | MS.gene47296:CDS | 40.0% | |
| GTTCCTCATCTTATGGCAAT+TGG | - | chr6.4:2826851-2826870 | MS.gene47296:intron | 40.0% | |
| GTTGGGAACAATAACTCTCA+TGG | - | chr6.4:2826803-2826822 | MS.gene47296:CDS | 40.0% | |
| TAACTAGTTCCCGGTTCAAT+CGG | - | chr6.4:2829360-2829379 | MS.gene47296:intron | 40.0% | |
| TACTTTGTATGCAGAGTACG+AGG | - | chr6.4:2828664-2828683 | MS.gene47296:intron | 40.0% | |
| TAGAATCGAGTCAAACTGGT+TGG | + | chr6.4:2829292-2829311 | None:intergenic | 40.0% | |
| TCTAGTTGGAACTGTAGCAA+GGG | - | chr6.4:2827708-2827727 | MS.gene47296:CDS | 40.0% | |
| TGCAAAAGCAGAAGATATGG+GGG | + | chr6.4:2829644-2829663 | None:intergenic | 40.0% | |
| TGGGAACAATAACTCTCATG+GGG | - | chr6.4:2826805-2826824 | MS.gene47296:CDS | 40.0% | |
| TGGTACTCTTTACAGGAACT+TGG | + | chr6.4:2830126-2830145 | None:intergenic | 40.0% | |
| TGTGACAGTTCATAAAGCTC+AGG | - | chr6.4:2829714-2829733 | MS.gene47296:intron | 40.0% | |
| TGTGTTCTACAGGTTAGTGT+AGG | - | chr6.4:2830363-2830382 | MS.gene47296:intron | 40.0% | |
| TTAAGCAATAAGGCTTGTGG+GGG | + | chr6.4:2831992-2832011 | None:intergenic | 40.0% | |
| ! | AAGGGTCACTTCAGTTTTCT+TGG | + | chr6.4:2827559-2827578 | None:intergenic | 40.0% |
| ! | AGCTCTTTGTTATGCTGAGT+TGG | - | chr6.4:2827792-2827811 | MS.gene47296:intron | 40.0% |
| ! | AGGGTCACTTCAGTTTTCTT+GGG | + | chr6.4:2827558-2827577 | None:intergenic | 40.0% |
| ! | CAATGTTTTCAAAACCGGAC+TGG | - | chr6.4:2829133-2829152 | MS.gene47296:CDS | 40.0% |
| ! | CATAGCTCTCTAAAAGATGC+AGG | - | chr6.4:2831928-2831947 | MS.gene47296:CDS | 40.0% |
| ! | CCATGACTCATAGTTTTCAC+CGG | + | chr6.4:2829167-2829186 | None:intergenic | 40.0% |
| ! | CTCTCAGCCAAGAATTTTGA+TGG | - | chr6.4:2830045-2830064 | MS.gene47296:intron | 40.0% |
| ! | TTCAGGTTTCATATGTCCAC+TGG | - | chr6.4:2831409-2831428 | MS.gene47296:intron | 40.0% |
| ! | TTCTAGTTGGAACTGTAGCA+AGG | - | chr6.4:2827707-2827726 | MS.gene47296:CDS | 40.0% |
| ! | TTTTTCATCTGGGTCAGTCA+GGG | - | chr6.4:2826936-2826955 | MS.gene47296:intron | 40.0% |
| !! | ATCAAGGAACTTGGCCTTTT+AGG | - | chr6.4:2829004-2829023 | MS.gene47296:intron | 40.0% |
| !! | CTGCATCTTTTAGAGAGCTA+TGG | + | chr6.4:2831930-2831949 | None:intergenic | 40.0% |
| !! | CTTCTAGAATCGAGTCAAAC+TGG | + | chr6.4:2829296-2829315 | None:intergenic | 40.0% |
| !! | CTTGGCCTTTTAGGTCAAAT+AGG | - | chr6.4:2829013-2829032 | MS.gene47296:intron | 40.0% |
| !! | GGGTTTGTTGATTCACAAGA+AGG | - | chr6.4:2826707-2826726 | MS.gene47296:CDS | 40.0% |
| !! | TTTATGTGGGCTAGTGGTAT+TGG | - | chr6.4:2827169-2827188 | MS.gene47296:intron | 40.0% |
| !!! | AATTTTGATGGCGATGGCAA+GGG | - | chr6.4:2830057-2830076 | MS.gene47296:intron | 40.0% |
| !!! | ATTCGGTGTCCGTGTTTTAT+AGG | - | chr6.4:2831669-2831688 | MS.gene47296:intron | 40.0% |
| !!! | TTTTTTCATCTGGGTCAGTC+AGG | - | chr6.4:2826935-2826954 | MS.gene47296:intron | 40.0% |
| !!! | TTTTTTGAAGGGGTGCTACT+TGG | - | chr6.4:2831845-2831864 | MS.gene47296:CDS | 40.0% |
| ACATCAAAAACCTTGACGGC+AGG | - | chr6.4:2829440-2829459 | MS.gene47296:intron | 45.0% | |
| AGTGGGTCCTACCATTAAGT+GGG | + | chr6.4:2827108-2827127 | None:intergenic | 45.0% | |
| ATGGATGTCTCTCAACTTGC+TGG | - | chr6.4:2830184-2830203 | MS.gene47296:CDS | 45.0% | |
| CATATGATGCTGCTGTGAAG+TGG | - | chr6.4:2829409-2829428 | MS.gene47296:intron | 45.0% | |
| CCAGCAGAATAACTAGTTCC+CGG | - | chr6.4:2829351-2829370 | MS.gene47296:intron | 45.0% | |
| CCAGTGATGTTAGTTGCTTG+CGG | + | chr6.4:2828323-2828342 | None:intergenic | 45.0% | |
| CCGGTGAAAACTATGAGTCA+TGG | - | chr6.4:2829164-2829183 | MS.gene47296:CDS | 45.0% | |
| CGCAAGCAACTAACATCACT+GGG | - | chr6.4:2828321-2828340 | MS.gene47296:CDS | 45.0% | |
| CTATGCTCATCATTGCTTGG+TGG | - | chr6.4:2829892-2829911 | MS.gene47296:intron | 45.0% | |
| CTTGGTTGCGAGTATCTGTA+TGG | - | chr6.4:2831863-2831882 | MS.gene47296:CDS | 45.0% | |
| GATTAGGCTGCACTTATTGG+AGG | - | chr6.4:2828427-2828446 | MS.gene47296:intron | 45.0% | |
| GATTCAGAGTCAATGGAGTG+TGG | - | chr6.4:2830465-2830484 | MS.gene47296:intron | 45.0% | |
| GCACTATGCTCATCATTGCT+TGG | - | chr6.4:2829889-2829908 | MS.gene47296:intron | 45.0% | |
| GCAGGGTTTCTTGGTTGATT+GGG | - | chr6.4:2827988-2828007 | MS.gene47296:intron | 45.0% | |
| GCCATCGCCATCAAAATTCT+TGG | + | chr6.4:2830055-2830074 | None:intergenic | 45.0% | |
| GTACATGTCTGACACCAACA+CGG | - | chr6.4:2830701-2830720 | MS.gene47296:CDS | 45.0% | |
| TACACCTTTCCACAGGAAAC+CGG | + | chr6.4:2827362-2827381 | None:intergenic | 45.0% | |
| TGATAAGCACTTCCAGCAGA+AGG | + | chr6.4:2827829-2827848 | None:intergenic | 45.0% | |
| TGCAGGGTTTCTTGGTTGAT+TGG | - | chr6.4:2827987-2828006 | MS.gene47296:intron | 45.0% | |
| TGCATTCGGAGTAGATGGAA+TGG | - | chr6.4:2828894-2828913 | MS.gene47296:intron | 45.0% | |
| TTGCGAAACAGCGGCTATAA+TGG | - | chr6.4:2828252-2828271 | MS.gene47296:CDS | 45.0% | |
| ! | AGACACAACTTTGGGAACAC+TGG | - | chr6.4:2831233-2831252 | MS.gene47296:intron | 45.0% |
| ! | GGGTCACTTCAGTTTTCTTG+GGG | + | chr6.4:2827557-2827576 | None:intergenic | 45.0% |
| ! | GGTCACTTCAGTTTTCTTGG+GGG | + | chr6.4:2827556-2827575 | None:intergenic | 45.0% |
| ! | GGTGGCATTCTTCTTTTGTC+TGG | - | chr6.4:2831173-2831192 | MS.gene47296:intron | 45.0% |
| ! | GTCACTTCAGTTTTCTTGGG+GGG | + | chr6.4:2827555-2827574 | None:intergenic | 45.0% |
| ! | TAGTGGGTCCTACCATTAAG+TGG | + | chr6.4:2827109-2827128 | None:intergenic | 45.0% |
| ! | TGGATGTCTCTCAACTTGCT+GGG | - | chr6.4:2830185-2830204 | MS.gene47296:CDS | 45.0% |
| ! | TTGTGAGCTTAGAGTACCTG+TGG | + | chr6.4:2829925-2829944 | None:intergenic | 45.0% |
| ! | TTTTCATCTGGGTCAGTCAG+GGG | - | chr6.4:2826937-2826956 | MS.gene47296:intron | 45.0% |
| ! | TTTTGCACAGACACGGAAAC+TGG | + | chr6.4:2830801-2830820 | None:intergenic | 45.0% |
| !! | CAGAAGTGTCTGTGCAACAT+TGG | + | chr6.4:2831591-2831610 | None:intergenic | 45.0% |
| !! | CTTCCATTTATGTGGGCTAG+TGG | - | chr6.4:2827163-2827182 | MS.gene47296:intron | 45.0% |
| !! | GGTAGTGATTATGGTGGACA+AGG | - | chr6.4:2826728-2826747 | MS.gene47296:CDS | 45.0% |
| !! | TAGTGGTATTGGCTTGGGTT+GGG | - | chr6.4:2827180-2827199 | MS.gene47296:intron | 45.0% |
| !! | TCAGGTGTTGGTGCAACAAT+TGG | - | chr6.4:2827670-2827689 | MS.gene47296:intron | 45.0% |
| !!! | GAATTTTGATGGCGATGGCA+AGG | - | chr6.4:2830056-2830075 | MS.gene47296:intron | 45.0% |
| !!! | GCCAAGAATTTTGATGGCGA+TGG | - | chr6.4:2830051-2830070 | MS.gene47296:intron | 45.0% |
| AAAGCAGTGCAGCAGACTTG+AGG | + | chr6.4:2828599-2828618 | None:intergenic | 50.0% | |
| ACTGTAGCAAGGGAACATGC+TGG | - | chr6.4:2827718-2827737 | MS.gene47296:CDS | 50.0% | |
| AGAGAATACCTGAGACCTCG+AGG | + | chr6.4:2827217-2827236 | None:intergenic | 50.0% | |
| ATCAGACCGACCGATTGAAC+CGG | + | chr6.4:2829373-2829392 | None:intergenic | 50.0% | |
| ATGCTGCTGTGAAGTGGTCA+TGG | - | chr6.4:2829415-2829434 | MS.gene47296:intron | 50.0% | |
| CAAACTGGTTGGACTGCAGT+TGG | + | chr6.4:2829281-2829300 | None:intergenic | 50.0% | |
| CACCGAATACGACACTGACA+CGG | + | chr6.4:2831657-2831676 | None:intergenic | 50.0% | |
| CAGAGTCAATGGAGTGTGGT+TGG | - | chr6.4:2830469-2830488 | MS.gene47296:intron | 50.0% | |
| CCGCAAGCAACTAACATCAC+TGG | - | chr6.4:2828320-2828339 | MS.gene47296:CDS | 50.0% | |
| CCGGGAACTAGTTATTCTGC+TGG | + | chr6.4:2829354-2829373 | None:intergenic | 50.0% | |
| GATGCAGGTTATGTGAAGGC+TGG | - | chr6.4:2831943-2831962 | MS.gene47296:CDS | 50.0% | |
| GGAGTAGATGGAATGGTTGC+TGG | - | chr6.4:2828901-2828920 | MS.gene47296:intron | 50.0% | |
| GGGTTTCTTGGTTGATTGGG+TGG | - | chr6.4:2827991-2828010 | MS.gene47296:intron | 50.0% | |
| GTTAACTCTCCGGTTTCCTG+TGG | - | chr6.4:2827350-2827369 | MS.gene47296:intron | 50.0% | |
| GTTACGTGGATCCTGTGTAC+TGG | - | chr6.4:2828541-2828560 | MS.gene47296:CDS | 50.0% | |
| GTTGGTGCAACAATTGGAGC+TGG | - | chr6.4:2827676-2827695 | MS.gene47296:CDS | 50.0% | |
| TAGTTCCCGGTTCAATCGGT+CGG | - | chr6.4:2829364-2829383 | MS.gene47296:intron | 50.0% | |
| TCGTGGCATCACCCCTAATT+TGG | - | chr6.4:2828055-2828074 | MS.gene47296:intron | 50.0% | |
| ! | AGCAGAAGATATGGGGGTGT+TGG | + | chr6.4:2829638-2829657 | None:intergenic | 50.0% |
| ! | CACAACTTTGGGAACACTGG+AGG | - | chr6.4:2831236-2831255 | MS.gene47296:intron | 50.0% |
| ! | CTTTGGGAACACTGGAGGTA+TGG | - | chr6.4:2831241-2831260 | MS.gene47296:intron | 50.0% |
| ! | GATCCTGTGTACTGGCATCA+AGG | - | chr6.4:2828549-2828568 | MS.gene47296:CDS | 50.0% |
| ! | TGCCGCCTTGGCATTTTTCA+TGG | - | chr6.4:2830165-2830184 | MS.gene47296:CDS | 50.0% |
| ! | TGGACTGCAGTTGGTTCAAC+TGG | + | chr6.4:2829272-2829291 | None:intergenic | 50.0% |
| ! | TTCAGTTTTCTTGGGGGGTC+TGG | + | chr6.4:2827550-2827569 | None:intergenic | 50.0% |
| !! | CTAGTGGTATTGGCTTGGGT+TGG | - | chr6.4:2827179-2827198 | MS.gene47296:intron | 50.0% |
| !! | GCAAGTCGTTTTCCTTCTGC+TGG | - | chr6.4:2827814-2827833 | MS.gene47296:intron | 50.0% |
| !! | GCAGAAGATATGGGGGTGTT+GGG | + | chr6.4:2829637-2829656 | None:intergenic | 50.0% |
| !! | TCATGGGGTGCAACTTGCTA+AGG | - | chr6.4:2826820-2826839 | MS.gene47296:CDS | 50.0% |
| !! | TCTGCTGCACTGCTTTTCGA+AGG | - | chr6.4:2828603-2828622 | MS.gene47296:CDS | 50.0% |
| !! | TGATGGTGGGACCCACTTAA+TGG | - | chr6.4:2827094-2827113 | MS.gene47296:intron | 50.0% |
| !! | TGGGCTAGTGGTATTGGCTT+GGG | - | chr6.4:2827175-2827194 | MS.gene47296:intron | 50.0% |
| !! | TGTCTCTCAACTTGCTGGGA+TGG | - | chr6.4:2830189-2830208 | MS.gene47296:CDS | 50.0% |
| AGTTGCTAGCGCTGCTGAAG+AGG | - | chr6.4:2828963-2828982 | MS.gene47296:intron | 55.0% | |
| ATGCCAAGGCGGCAGAAACA+AGG | + | chr6.4:2830159-2830178 | None:intergenic | 55.0% | |
| CAATGGCAATCCTGCCGTCA+AGG | + | chr6.4:2829453-2829472 | None:intergenic | 55.0% | |
| CCTCCTTGATGCCAGTACAC+AGG | + | chr6.4:2828555-2828574 | None:intergenic | 55.0% | |
| CGAATACGACACTGACACGG+CGG | + | chr6.4:2831654-2831673 | None:intergenic | 55.0% | |
| CGCCGTGTCAGTGTCGTATT+CGG | - | chr6.4:2831652-2831671 | MS.gene47296:intron | 55.0% | |
| CTCTCCGGTTTCCTGTGGAA+AGG | - | chr6.4:2827355-2827374 | MS.gene47296:intron | 55.0% | |
| GAATACCTGAGACCTCGAGG+AGG | + | chr6.4:2827214-2827233 | None:intergenic | 55.0% | |
| GGAGTGTGGTTGGAGCCATT+TGG | - | chr6.4:2830479-2830498 | MS.gene47296:intron | 55.0% | |
| GGCATGTGTTCGTTCCGTGT+TGG | + | chr6.4:2830718-2830737 | None:intergenic | 55.0% | |
| GGTGGGACCCACTTAATGGT+AGG | - | chr6.4:2827098-2827117 | MS.gene47296:intron | 55.0% | |
| TCAGACCGACCGATTGAACC+GGG | + | chr6.4:2829372-2829391 | None:intergenic | 55.0% | |
| ! | CCTGTGTACTGGCATCAAGG+AGG | - | chr6.4:2828552-2828571 | MS.gene47296:CDS | 55.0% |
| ! | GCTTGGTGGAATGTTGCCAC+AGG | - | chr6.4:2829906-2829925 | MS.gene47296:intron | 55.0% |
| !! | AACCGGACTGGCGTTTGAAC+CGG | - | chr6.4:2829145-2829164 | MS.gene47296:CDS | 55.0% |
| !! | ATAGGCAGTAGAGGCACCAG+TGG | + | chr6.4:2831428-2831447 | None:intergenic | 55.0% |
| !! | GTGGGCTAGTGGTATTGGCT+TGG | - | chr6.4:2827174-2827193 | MS.gene47296:intron | 55.0% |
| !! | TTGATGGCGATGGCAAGGGA+TGG | - | chr6.4:2830061-2830080 | MS.gene47296:intron | 55.0% |
| ATCTGGGTCAGTCAGGGGTG+TGG | - | chr6.4:2826942-2826961 | MS.gene47296:intron | 60.0% | |
| ! | GGTCAGTCAGGGGTGTGGAA+TGG | - | chr6.4:2826947-2826966 | MS.gene47296:intron | 60.0% |
| !! | CACCGGTTCAAACGCCAGTC+CGG | + | chr6.4:2829150-2829169 | None:intergenic | 60.0% |
| !! | TGGCCTTGTTTCTGCCGCCT+TGG | - | chr6.4:2830153-2830172 | MS.gene47296:CDS | 60.0% |
| GGTGGAGCTGCTGTTGCTCG+TGG | - | chr6.4:2828038-2828057 | MS.gene47296:intron | 65.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | - | chr6.4:2827206-2827225 | MS.gene47296:intron | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | - | chr6.4:2827199-2827218 | MS.gene47296:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 2826704 | 2832011 | 2826704 | ID=MS.gene47296 |
| chr6.4 | mRNA | 2826704 | 2832011 | 2826704 | ID=MS.gene47296.t1;Parent=MS.gene47296 |
| chr6.4 | exon | 2831843 | 2832011 | 2831843 | ID=MS.gene47296.t1.exon1;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2831843 | 2832011 | 2831843 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2830840 | 2831041 | 2830840 | ID=MS.gene47296.t1.exon2;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2830840 | 2831041 | 2830840 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2830639 | 2830723 | 2830639 | ID=MS.gene47296.t1.exon3;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2830639 | 2830723 | 2830639 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2830142 | 2830282 | 2830142 | ID=MS.gene47296.t1.exon4;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2830142 | 2830282 | 2830142 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2829919 | 2830037 | 2829919 | ID=MS.gene47296.t1.exon5;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2829919 | 2830037 | 2829919 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2829731 | 2829827 | 2829731 | ID=MS.gene47296.t1.exon6;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2829731 | 2829827 | 2829731 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2829029 | 2829201 | 2829029 | ID=MS.gene47296.t1.exon7;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2829029 | 2829201 | 2829029 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2828788 | 2828854 | 2828788 | ID=MS.gene47296.t1.exon8;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2828788 | 2828854 | 2828788 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2828505 | 2828663 | 2828505 | ID=MS.gene47296.t1.exon9;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2828505 | 2828663 | 2828505 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2828115 | 2828340 | 2828115 | ID=MS.gene47296.t1.exon10;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2828115 | 2828340 | 2828115 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2827676 | 2827781 | 2827676 | ID=MS.gene47296.t1.exon11;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2827676 | 2827781 | 2827676 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2827458 | 2827570 | 2827458 | ID=MS.gene47296.t1.exon12;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2827458 | 2827570 | 2827458 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2827226 | 2827301 | 2827226 | ID=MS.gene47296.t1.exon13;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2827226 | 2827301 | 2827226 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| chr6.4 | exon | 2826704 | 2826860 | 2826704 | ID=MS.gene47296.t1.exon14;Parent=MS.gene47296.t1 |
| chr6.4 | CDS | 2826704 | 2826860 | 2826704 | ID=cds.MS.gene47296.t1;Parent=MS.gene47296.t1 |
| Gene Sequence |
| Protein sequence |
