Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47387.t1 | XP_003590411.2 | 93.1 | 609 | 36 | 2 | 1 | 607 | 1 | 605 | 0.00E+00 | 1115.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47387.t1 | Q9ZSS6 | 73.3 | 591 | 153 | 2 | 17 | 607 | 7 | 592 | 8.8e-246 | 850.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47387.t1 | G7I9D6 | 93.1 | 609 | 36 | 2 | 1 | 607 | 1 | 605 | 0.0e+00 | 1115.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47387 | MS.gene77617 | PPI |
| MS.gene47387 | MS.gene92155 | PPI |
| MS.gene47387 | MS.gene073967 | PPI |
| MS.gene039012 | MS.gene47387 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47387.t1 | MTR_1g061800 | 96.716 | 609 | 14 | 2 | 1 | 607 | 1 | 605 | 0.0 | 1216 |
| MS.gene47387.t1 | MTR_8g098460 | 29.677 | 310 | 199 | 5 | 117 | 416 | 24 | 324 | 7.83e-36 | 137 |
| MS.gene47387.t1 | MTR_7g103510 | 29.545 | 308 | 202 | 6 | 117 | 416 | 18 | 318 | 5.55e-32 | 126 |
| MS.gene47387.t1 | MTR_0681s0020 | 31.879 | 298 | 188 | 7 | 123 | 415 | 28 | 315 | 3.26e-21 | 99.4 |
| MS.gene47387.t1 | MTR_1g056740 | 28.931 | 159 | 112 | 1 | 126 | 284 | 29 | 186 | 7.17e-18 | 82.8 |
| MS.gene47387.t1 | MTR_4g087510 | 29.319 | 191 | 113 | 6 | 141 | 316 | 72 | 255 | 6.23e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47387.t1 | AT3G10050 | 78.383 | 532 | 114 | 1 | 76 | 607 | 62 | 592 | 0.0 | 827 |
| MS.gene47387.t1 | AT4G11640 | 31.250 | 304 | 190 | 4 | 126 | 419 | 29 | 323 | 6.81e-32 | 126 |
Find 176 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCACAGGTGAAGATAAT+TGG | 0.190938 | 1.4:-51067201 | MS.gene47387:intron |
| ATCAAAGCACCAGGTCTTTC+TGG | 0.204169 | 1.4:+51064878 | None:intergenic |
| AGAAAGCTGTTGTTCTTTAC+AGG | 0.220056 | 1.4:-51065572 | MS.gene47387:intron |
| TCATGGCCAAAGAGTGGTTT+TGG | 0.273388 | 1.4:-51067136 | MS.gene47387:CDS |
| GCAGGCGCTCTTGCTCTTGC+TGG | 0.290001 | 1.4:-51065916 | MS.gene47387:CDS |
| TGATCATCCCGATGTCATTA+TGG | 0.291301 | 1.4:-51067450 | MS.gene47387:CDS |
| GAAGCATACTGCAAGTATTA+TGG | 0.291652 | 1.4:-51065889 | MS.gene47387:CDS |
| GGTGCTACTGTGGTCCTTAT+TGG | 0.302177 | 1.4:-51067548 | MS.gene47387:CDS |
| TAAACTTCCAAAGGATGTTT+TGG | 0.314115 | 1.4:-51067988 | MS.gene47387:CDS |
| ATCGTAGCGCCTCCATTGTT+TGG | 0.317827 | 1.4:+51069085 | None:intergenic |
| GACTAGTATACTTACTTCTA+AGG | 0.323743 | 1.4:-51068758 | MS.gene47387:CDS |
| CCTTTCTCCAAAACATCCTT+TGG | 0.326655 | 1.4:+51067981 | None:intergenic |
| GGAGGTGGTGGTCTCATTGC+TGG | 0.328700 | 1.4:-51067356 | MS.gene47387:CDS |
| AGGTTGTGGCTGTGTGGTGG+TGG | 0.338836 | 1.4:+51069056 | None:intergenic |
| AAATGTATTAGTTGGAATTC+AGG | 0.343393 | 1.4:-51064666 | MS.gene47387:CDS |
| AATGGTTTGAAACGAGGGTT+AGG | 0.357051 | 1.4:+51068982 | None:intergenic |
| GATCATCCCGATGTCATTAT+GGG | 0.362274 | 1.4:-51067449 | MS.gene47387:CDS |
| GTTCACAGGTGAAGATAATT+GGG | 0.369464 | 1.4:-51067200 | MS.gene47387:intron |
| ACAGACTTGGTGTTAATGTT+TGG | 0.380123 | 1.4:-51068684 | MS.gene47387:CDS |
| TTCTAACCTGTGCACGGTAA+TGG | 0.384917 | 1.4:+51064810 | None:intergenic |
| CATGAACGGGACGCTTCATC+TGG | 0.385719 | 1.4:+51067396 | None:intergenic |
| TGTTGAATCACCTCTTGAAT+TGG | 0.388453 | 1.4:-51068722 | MS.gene47387:CDS |
| AGAAACCATTTCAACAGGTT+TGG | 0.392333 | 1.4:+51068933 | None:intergenic |
| AACGATCGTGCCACCGGACT+TGG | 0.396780 | 1.4:-51064617 | MS.gene47387:CDS |
| TGCAATTTGTGCATCGATAA+AGG | 0.407203 | 1.4:-51067007 | MS.gene47387:intron |
| CGCGTTGCAATTCAATCTCT+TGG | 0.408559 | 1.4:+51067908 | None:intergenic |
| GGAGCAGAAACCATTTCAAC+AGG | 0.411164 | 1.4:+51068928 | None:intergenic |
| TCGTAGCGCCTCCATTGTTT+GGG | 0.411805 | 1.4:+51069086 | None:intergenic |
| TCCCGATGTCATTATGGGTC+AGG | 0.412631 | 1.4:-51067444 | MS.gene47387:CDS |
| CATCGTAGGAATCTCCAATA+AGG | 0.416381 | 1.4:+51067534 | None:intergenic |
| AGAACCTCATTCTGAATATC+AGG | 0.417812 | 1.4:+51064917 | None:intergenic |
| TTGTGGCTGTGTGGTGGTGG+AGG | 0.421979 | 1.4:+51069059 | None:intergenic |
| AGTCTCCAAACCTGTTGAAA+TGG | 0.422820 | 1.4:-51068938 | MS.gene47387:CDS |
| TTGATGTCAGGAGTGGTAAC+TGG | 0.423089 | 1.4:+51067873 | None:intergenic |
| GCGGCGGTGGTTGTTATGAA+TGG | 0.423932 | 1.4:+51068964 | None:intergenic |
| CCTGGTCCAAAACCACTCTT+TGG | 0.424183 | 1.4:+51067130 | None:intergenic |
| GGCGGCTCCTCCGAGGTTGA+AGG | 0.426236 | 1.4:-51068887 | MS.gene47387:CDS |
| ACATGAATTTCGATAAACTT+AGG | 0.431536 | 1.4:-51065825 | MS.gene47387:CDS |
| GGCACAAAGATTGCATGAAC+GGG | 0.443581 | 1.4:+51067383 | None:intergenic |
| GCATTAAAAGCTTGAAGAAA+AGG | 0.446362 | 1.4:+51064567 | None:intergenic |
| TTTGGAGACTGCGGCGGCGG+TGG | 0.446726 | 1.4:+51068951 | None:intergenic |
| AATTCCTCCATCTCGCTGCT+TGG | 0.448041 | 1.4:+51064641 | None:intergenic |
| TGCTTCGGACAGGGTGAAGC+TGG | 0.448565 | 1.4:-51064692 | MS.gene47387:intron |
| GTGAGGTTGTGGCTGTGTGG+TGG | 0.455945 | 1.4:+51069053 | None:intergenic |
| TTTGTGCCTGTGGGAGGTGG+TGG | 0.459179 | 1.4:-51067368 | MS.gene47387:CDS |
| GCTGGAGCAAATGTATTAGT+TGG | 0.462032 | 1.4:-51064674 | MS.gene47387:CDS |
| TGCTAAGAAGCGTGCTATAG+AGG | 0.465358 | 1.4:-51067498 | MS.gene47387:CDS |
| GCATTCTGTGACGGTGGTTA+CGG | 0.467805 | 1.4:+51069022 | None:intergenic |
| AAAAGAAATGCAGGAGAGAA+TGG | 0.468861 | 1.4:-51065310 | MS.gene47387:CDS |
| ATCTTTGTGCCTGTGGGAGG+TGG | 0.470012 | 1.4:-51067371 | MS.gene47387:CDS |
| TAAATGAATACCTTGATGTC+AGG | 0.478406 | 1.4:+51067861 | None:intergenic |
| AGGTTTGGAGACTGCGGCGG+CGG | 0.484831 | 1.4:+51068948 | None:intergenic |
| CTCATTCTGAATATCAGGTC+GGG | 0.484844 | 1.4:+51064922 | None:intergenic |
| AAGAACAACAGCTTTCTCCT+TGG | 0.486008 | 1.4:+51065578 | None:intergenic |
| ATCGAAATTCATGTTTGCTC+CGG | 0.486984 | 1.4:+51065834 | None:intergenic |
| ACTGTCATGCCGGAGGAGCC+TGG | 0.487185 | 1.4:-51065751 | MS.gene47387:CDS |
| CCCTGACCCATAATGACATC+GGG | 0.487914 | 1.4:+51067443 | None:intergenic |
| CGGAGGAGGAGGTGAGGTTG+TGG | 0.491684 | 1.4:+51069042 | None:intergenic |
| CAATCTCTCAGACGTTGACT+TGG | 0.492337 | 1.4:-51065265 | MS.gene47387:CDS |
| CCAAGTCTGTCAGAAAGCTT+TGG | 0.493609 | 1.4:+51068697 | None:intergenic |
| ATGACATCGGGATGATCAAA+AGG | 0.497200 | 1.4:+51067455 | None:intergenic |
| TTGTGCAAGGAGTTGGTAGA+TGG | 0.498844 | 1.4:-51067051 | MS.gene47387:CDS |
| CCAAAGCTTTCTGACAGACT+TGG | 0.500138 | 1.4:-51068697 | MS.gene47387:CDS |
| GGTGGATACTGAAGTGAATC+CGG | 0.500821 | 1.4:+51068859 | None:intergenic |
| AGCCAATGCATTTGCATCAG+TGG | 0.500969 | 1.4:+51067170 | None:intergenic |
| TTGAAACTGCCAGGCTCCTC+CGG | 0.501285 | 1.4:+51065742 | None:intergenic |
| TTTATTCCATTACCGTGCAC+AGG | 0.503763 | 1.4:-51064816 | MS.gene47387:intron |
| CTTGTTGCAGGACATGTTTG+AGG | 0.504713 | 1.4:-51065962 | MS.gene47387:intron |
| GCAAGAGCAAGAGCGCCTGC+TGG | 0.505562 | 1.4:+51065919 | None:intergenic |
| GCCAATGCATTTGCATCAGT+GGG | 0.508903 | 1.4:+51067171 | None:intergenic |
| TCACCACCACGTGTCCTGTC+AGG | 0.510048 | 1.4:+51068817 | None:intergenic |
| GATATTCCATCGTGGACTAA+AGG | 0.510605 | 1.4:+51064841 | None:intergenic |
| TCCGGCGAAACCTTCAACCT+CGG | 0.516696 | 1.4:+51068877 | None:intergenic |
| CAAAACTGTTTGAAACTGCC+AGG | 0.518258 | 1.4:+51065733 | None:intergenic |
| ATGGTTTGAAACGAGGGTTA+GGG | 0.519460 | 1.4:+51068983 | None:intergenic |
| TTGGCTTTGTCACTTCATCA+TGG | 0.519786 | 1.4:-51067153 | MS.gene47387:CDS |
| CTGCAAGTATTATGGACTCA+AGG | 0.522899 | 1.4:-51065881 | MS.gene47387:CDS |
| GGTGGTGATGAAGGTGATTG+TGG | 0.525787 | 1.4:-51068802 | MS.gene47387:CDS |
| CCGTGGAGCTTATAATATGA+TGG | 0.527606 | 1.4:-51068012 | MS.gene47387:CDS |
| ACGTTGGAGCGGTTCCTGAC+AGG | 0.531537 | 1.4:-51068831 | MS.gene47387:CDS |
| GTGGAAATCTGTGGAGAGGT+GGG | 0.532704 | 1.4:-51067570 | MS.gene47387:CDS |
| GAGGTGAGGTTGTGGCTGTG+TGG | 0.533066 | 1.4:+51069050 | None:intergenic |
| GAAATTCATGTTTGCTCCGG+AGG | 0.534000 | 1.4:+51065837 | None:intergenic |
| ATTATGGGTCAGGGAACTGT+CGG | 0.534240 | 1.4:-51067434 | MS.gene47387:CDS |
| GGGGTTATATGCTCTTCAGC+TGG | 0.534738 | 1.4:-51067960 | MS.gene47387:CDS |
| TGTGACGGTGGTTACGGAGG+AGG | 0.536430 | 1.4:+51069028 | None:intergenic |
| AACCTCGGAGGAGCCGCCGC+CGG | 0.538460 | 1.4:+51068892 | None:intergenic |
| CTTAGAACTAAAAGAAATGC+AGG | 0.539142 | 1.4:-51065319 | MS.gene47387:CDS |
| GCCGCCGGTGACTCAACAAA+AGG | 0.541887 | 1.4:+51068907 | None:intergenic |
| TTATGAATGGTTTGAAACGA+GGG | 0.543995 | 1.4:+51068977 | None:intergenic |
| TCATGCAATCTTTGTGCCTG+TGG | 0.545885 | 1.4:-51067378 | MS.gene47387:CDS |
| TCCGAGGTTGAAGGTTTCGC+CGG | 0.547453 | 1.4:-51068878 | MS.gene47387:CDS |
| CCCGATGTCATTATGGGTCA+GGG | 0.549015 | 1.4:-51067443 | MS.gene47387:CDS |
| TTATGGGTCAGGGAACTGTC+GGG | 0.553513 | 1.4:-51067433 | MS.gene47387:CDS |
| AGTTACCACTCCTGACATCA+AGG | 0.554442 | 1.4:-51067871 | MS.gene47387:intron |
| TGCAAGTATTATGGACTCAA+GGG | 0.554844 | 1.4:-51065880 | MS.gene47387:CDS |
| TCAGGTTCCAAGCAGCGAGA+TGG | 0.557536 | 1.4:-51064648 | MS.gene47387:CDS |
| ATTCAATCTCTTGGCAGACA+TGG | 0.558202 | 1.4:+51067917 | None:intergenic |
| GACGGTGGTTACGGAGGAGG+AGG | 0.559083 | 1.4:+51069031 | None:intergenic |
| ATTATAGTCATACCCAAGTC+CGG | 0.560339 | 1.4:+51064604 | None:intergenic |
| ACGATCGTGCCACCGGACTT+GGG | 0.560800 | 1.4:-51064616 | MS.gene47387:CDS |
| AGGCACAAAGATTGCATGAA+CGG | 0.561561 | 1.4:+51067382 | None:intergenic |
| GAATTCAACGATCGTGCCAC+CGG | 0.562341 | 1.4:-51064623 | MS.gene47387:CDS |
| AGTGGAAATCTGTGGAGAGG+TGG | 0.565711 | 1.4:-51067571 | MS.gene47387:CDS |
| GGAGAGGTGGGGTGCTACTG+TGG | 0.565931 | 1.4:-51067558 | MS.gene47387:CDS |
| CAGGTTGGAGGATTTGCAGA+TGG | 0.569395 | 1.4:-51067111 | MS.gene47387:CDS |
| TCTGCTGTTAACTGTCATGC+CGG | 0.572842 | 1.4:-51065761 | MS.gene47387:CDS |
| CATGCAATCTTTGTGCCTGT+GGG | 0.573818 | 1.4:-51067377 | MS.gene47387:CDS |
| CCGACCTGATATTCAGAATG+AGG | 0.577734 | 1.4:-51064921 | MS.gene47387:CDS |
| GGTGTGGCTGTAAAAGAGGT+TGG | 0.578802 | 1.4:-51067090 | MS.gene47387:CDS |
| AGCACCAGGTCTTTCTGGAA+AGG | 0.579418 | 1.4:+51064883 | None:intergenic |
| GGGTCAGGGAACTGTCGGGA+TGG | 0.580900 | 1.4:-51067429 | MS.gene47387:CDS |
| AATCAAAATGACCCAAACAA+TGG | 0.581108 | 1.4:-51069097 | None:intergenic |
| GGAACCGCTCCAACGTAACC+AGG | 0.581487 | 1.4:+51068838 | None:intergenic |
| AGGACACGTGGTGGTGATGA+AGG | 0.582103 | 1.4:-51068811 | MS.gene47387:CDS |
| TTCAACAGGTTTGGAGACTG+CGG | 0.582478 | 1.4:+51068942 | None:intergenic |
| TCAGCTGGAAATCATGCTCA+AGG | 0.584823 | 1.4:-51067945 | MS.gene47387:CDS |
| TGTGGTGCATTCTGTGACGG+TGG | 0.586258 | 1.4:+51069016 | None:intergenic |
| AGGAGCATATTGGAACCAGC+AGG | 0.586301 | 1.4:-51065934 | MS.gene47387:CDS |
| ACCTTTGCAGTGGAAATCTG+TGG | 0.590239 | 1.4:-51067579 | MS.gene47387:intron |
| TATGATGGCTAAACTTCCAA+AGG | 0.590661 | 1.4:-51067997 | MS.gene47387:CDS |
| CACCGGCGGCGGCTCCTCCG+AGG | 0.591335 | 1.4:-51068894 | MS.gene47387:CDS |
| GTTATGAATGGTTTGAAACG+AGG | 0.592217 | 1.4:+51068976 | None:intergenic |
| CAGTATCCACCTGGTTACGT+TGG | 0.593210 | 1.4:-51068847 | MS.gene47387:CDS |
| AGCTTTGGCGCCAATTCAAG+AGG | 0.594505 | 1.4:+51068712 | None:intergenic |
| TTCTGTGACGGTGGTTACGG+AGG | 0.596110 | 1.4:+51069025 | None:intergenic |
| GCAATCTTTGTGCCTGTGGG+AGG | 0.596806 | 1.4:-51067374 | MS.gene47387:CDS |
| ACCCACTGATGCAAATGCAT+TGG | 0.597685 | 1.4:-51067172 | MS.gene47387:CDS |
| AAGAAGCGTGCTATAGAGGA+TGG | 0.597872 | 1.4:-51067494 | MS.gene47387:CDS |
| GGTTCCAAGCAGCGAGATGG+AGG | 0.598270 | 1.4:-51064645 | MS.gene47387:CDS |
| AATGTTATAGCAATAACCTC+CGG | 0.600808 | 1.4:-51065853 | MS.gene47387:CDS |
| TGGAGGATTTGCAGATGGTG+TGG | 0.601430 | 1.4:-51067106 | MS.gene47387:CDS |
| ATTTATCCTCTTCACGTAAG+CGG | 0.602234 | 1.4:+51067328 | None:intergenic |
| ATATGCTTGTGCTTCATCGT+AGG | 0.606395 | 1.4:+51067520 | None:intergenic |
| GATTGTGGAGTAAGTGCTAT+GGG | 0.606504 | 1.4:-51068787 | MS.gene47387:CDS |
| ACTTCATCATGGCCAAAGAG+TGG | 0.606993 | 1.4:-51067142 | MS.gene47387:CDS |
| TCCCTGACCCATAATGACAT+CGG | 0.610285 | 1.4:+51067442 | None:intergenic |
| CCTCATTCTGAATATCAGGT+CGG | 0.611117 | 1.4:+51064921 | None:intergenic |
| TGATTGTGGAGTAAGTGCTA+TGG | 0.611156 | 1.4:-51068788 | MS.gene47387:CDS |
| CAAATACAGATATAGTTCCA+AGG | 0.611281 | 1.4:-51065595 | MS.gene47387:CDS |
| TCCACCTGGTTACGTTGGAG+CGG | 0.612380 | 1.4:-51068842 | MS.gene47387:CDS |
| GTAACTGAACTTGCTAATGT+CGG | 0.613762 | 1.4:-51065799 | MS.gene47387:CDS |
| GTATTGCCGCTTACGTGAAG+AGG | 0.614397 | 1.4:-51067334 | MS.gene47387:CDS |
| CCATCATATTATAAGCTCCA+CGG | 0.615666 | 1.4:+51068012 | None:intergenic |
| CATCTGCAAATCCTCCAACC+TGG | 0.616040 | 1.4:+51067112 | None:intergenic |
| GAAAGATCATTTGCGTCACA+TGG | 0.617461 | 1.4:-51065241 | MS.gene47387:intron |
| TGCAAATTCTAACCTGTGCA+CGG | 0.621586 | 1.4:+51064804 | None:intergenic |
| TCGATGCACAAATTGCATCA+CGG | 0.623238 | 1.4:+51067013 | None:intergenic |
| TTTACCTTTCCAGAAAGACC+TGG | 0.624311 | 1.4:-51064887 | MS.gene47387:CDS |
| ATGAGACCACCACCTCCCAC+AGG | 0.625201 | 1.4:+51067362 | None:intergenic |
| GGCTGTAAAAGAGGTTGGTG+AGG | 0.625231 | 1.4:-51067085 | MS.gene47387:CDS |
| TGGTTACGGAGGAGGAGGTG+AGG | 0.625554 | 1.4:+51069036 | None:intergenic |
| GATTCACTTCAGTATCCACC+TGG | 0.627666 | 1.4:-51068856 | MS.gene47387:CDS |
| AGATGGTGTGGCTGTAAAAG+AGG | 0.629062 | 1.4:-51067094 | MS.gene47387:CDS |
| CAAAATGACCCAAACAATGG+AGG | 0.629565 | 1.4:-51069094 | None:intergenic |
| TAGACTCCTTTAGTCCACGA+TGG | 0.634604 | 1.4:-51064847 | MS.gene47387:CDS |
| AACAGGTTTGGAGACTGCGG+CGG | 0.640333 | 1.4:+51068945 | None:intergenic |
| TGGAAATCTGTGGAGAGGTG+GGG | 0.641456 | 1.4:-51067569 | MS.gene47387:CDS |
| GCAAGTATTATGGACTCAAG+GGG | 0.645018 | 1.4:-51065879 | MS.gene47387:CDS |
| GAATACCTTGATGTCAGGAG+TGG | 0.645242 | 1.4:+51067866 | None:intergenic |
| GCGGTTCCTGACAGGACACG+TGG | 0.649476 | 1.4:-51068823 | MS.gene47387:CDS |
| CGTGAAGAGGATAAATCCAG+AGG | 0.652583 | 1.4:-51067321 | MS.gene47387:intron |
| GCTGTTAACTGTCATGCCGG+AGG | 0.655840 | 1.4:-51065758 | MS.gene47387:CDS |
| ACAGGTGAAGATAATTGGGG+TGG | 0.664304 | 1.4:-51067196 | MS.gene47387:intron |
| TAGTGTGGTGCATTCTGTGA+CGG | 0.664443 | 1.4:+51069013 | None:intergenic |
| TGCAGTGGAAATCTGTGGAG+AGG | 0.669367 | 1.4:-51067574 | MS.gene47387:intron |
| ACATCGGGATGATCAAAAGG+AGG | 0.679406 | 1.4:+51067458 | None:intergenic |
| GGCGAAACCTTCAACCTCGG+AGG | 0.692911 | 1.4:+51068880 | None:intergenic |
| ACCGCTCCAACGTAACCAGG+TGG | 0.696827 | 1.4:+51068841 | None:intergenic |
| TTCACAGGTGAAGATAATTG+GGG | 0.702347 | 1.4:-51067199 | MS.gene47387:intron |
| ATAGTCATACCCAAGTCCGG+TGG | 0.715971 | 1.4:+51064607 | None:intergenic |
| GGTTAGGGTGAAGAGTAGTG+TGG | 0.726653 | 1.4:+51068998 | None:intergenic |
| GTTCCTGACAGGACACGTGG+TGG | 0.729331 | 1.4:-51068820 | MS.gene47387:CDS |
| CAAGAGATTGAATTGCAACG+CGG | 0.735011 | 1.4:-51067907 | MS.gene47387:CDS |
| CAAGTATTATGGACTCAAGG+GGG | 0.741660 | 1.4:-51065878 | MS.gene47387:CDS |
| AATAAAGAGATATTCCATCG+TGG | 0.751711 | 1.4:+51064833 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAAATTCAAAATGAA+GGG | + | chr1.4:51068456-51068475 | None:intergenic | 10.0% |
| !! | TTATAATTATTATGAAATTG+TGG | - | chr1.4:51065588-51065607 | MS.gene47387:CDS | 10.0% |
| !! | TTTATAAAAATTCAAAATGA+AGG | + | chr1.4:51068457-51068476 | None:intergenic | 10.0% |
| !!! | ATCAAAAATTGATAATAAAC+AGG | + | chr1.4:51068141-51068160 | None:intergenic | 15.0% |
| !!! | GTTAATTTTTTGTTTTGTTT+TGG | - | chr1.4:51065101-51065120 | MS.gene47387:intron | 15.0% |
| !!! | TATTTTATTATTCATTGTGT+TGG | - | chr1.4:51068285-51068304 | MS.gene47387:intron | 15.0% |
| !! | AATTCAAAAATTGTGTGTAT+TGG | + | chr1.4:51065390-51065409 | None:intergenic | 20.0% |
| !! | AGAATTATTTAATGCTTCAT+TGG | - | chr1.4:51067073-51067092 | MS.gene47387:CDS | 20.0% |
| !! | ATTACACAACAAAAAAAGTT+CGG | + | chr1.4:51067050-51067069 | None:intergenic | 20.0% |
| !! | ATTTAGTACTTAACTTTGAT+TGG | + | chr1.4:51068509-51068528 | None:intergenic | 20.0% |
| !! | CCAGATAAAAAAAAAATATC+TGG | + | chr1.4:51067229-51067248 | None:intergenic | 20.0% |
| !! | TATTATTCATAAACTTGTCA+AGG | + | chr1.4:51065315-51065334 | None:intergenic | 20.0% |
| !! | TCTTGTTGAAGAAATTAATA+TGG | - | chr1.4:51066020-51066039 | MS.gene47387:intron | 20.0% |
| !! | TGGTACAATTATATGAATTT+GGG | - | chr1.4:51067442-51067461 | MS.gene47387:CDS | 20.0% |
| !! | TTTCAAAACAAAGTTAAACT+TGG | + | chr1.4:51068692-51068711 | None:intergenic | 20.0% |
| !! | TTTGTACATTAAATGGAAAT+TGG | - | chr1.4:51067628-51067647 | MS.gene47387:intron | 20.0% |
| !!! | AAAAAAATATCTGGAGTTAA+CGG | + | chr1.4:51067220-51067239 | None:intergenic | 20.0% |
| !!! | AATACTGCATGTTTTTTTTT+TGG | - | chr1.4:51068894-51068913 | MS.gene47387:CDS | 20.0% |
| !!! | ATATGTTGTTTATGAAATTG+TGG | - | chr1.4:51065556-51065575 | MS.gene47387:intron | 20.0% |
| !!! | ATTTTACTCTGTACTTTTAA+AGG | - | chr1.4:51067470-51067489 | MS.gene47387:CDS | 20.0% |
| !!! | CCAGATATTTTTTTTTTATC+TGG | - | chr1.4:51067226-51067245 | MS.gene47387:intron | 20.0% |
| !!! | TAATAAAATATTATTGGCCT+TGG | + | chr1.4:51068275-51068294 | None:intergenic | 20.0% |
| !!! | TTCATTGGTTTATATATACT+TGG | - | chr1.4:51067088-51067107 | MS.gene47387:CDS | 20.0% |
| !!! | TTTGAAAACATTTTTCAGAT+GGG | - | chr1.4:51068705-51068724 | MS.gene47387:CDS | 20.0% |
| !!! | TTTTGAAAACATTTTTCAGA+TGG | - | chr1.4:51068704-51068723 | MS.gene47387:CDS | 20.0% |
| ! | AAAAAAAAAAAGGATGCATG+TGG | - | chr1.4:51067422-51067441 | MS.gene47387:CDS | 25.0% |
| ! | AAAATAATTCCCAATTCTCA+CGG | + | chr1.4:51067588-51067607 | None:intergenic | 25.0% |
| ! | AAATGTATTAGTTGGAATTC+AGG | - | chr1.4:51068986-51069005 | MS.gene47387:CDS | 25.0% |
| ! | ACAAGACCATTAAATCAAAT+GGG | + | chr1.4:51068605-51068624 | None:intergenic | 25.0% |
| ! | ACATGAATTTCGATAAACTT+AGG | - | chr1.4:51067827-51067846 | MS.gene47387:intron | 25.0% |
| ! | ACGTGTTTAGTAAACATTAT+CGG | + | chr1.4:51068639-51068658 | None:intergenic | 25.0% |
| ! | CAAAAATAAGTCAATCCAAA+CGG | + | chr1.4:51065189-51065208 | None:intergenic | 25.0% |
| ! | GTGGTACAATTATATGAATT+TGG | - | chr1.4:51067441-51067460 | MS.gene47387:CDS | 25.0% |
| ! | TCTGCAAACAATAACAAATT+TGG | - | chr1.4:51066966-51066985 | MS.gene47387:intron | 25.0% |
| ! | TTAATGTACAAAACATTCGA+AGG | + | chr1.4:51067620-51067639 | None:intergenic | 25.0% |
| !! | AAAAAATATCTGGAGTTAAC+GGG | + | chr1.4:51067219-51067238 | None:intergenic | 25.0% |
| !! | ACAAATTTGGAATTGATTGA+TGG | - | chr1.4:51066979-51066998 | MS.gene47387:intron | 25.0% |
| !! | CACACAATTTTTGAATTTTC+TGG | - | chr1.4:51065393-51065412 | MS.gene47387:intron | 25.0% |
| !! | CGAATGTTTTGTACATTAAA+TGG | - | chr1.4:51067621-51067640 | MS.gene47387:intron | 25.0% |
| !! | TTGACATTTTTAATGTTCAC+AGG | - | chr1.4:51066438-51066457 | MS.gene47387:intron | 25.0% |
| !!! | ACTGTTATTTTTTCCAAAAC+AGG | - | chr1.4:51067969-51067988 | MS.gene47387:CDS | 25.0% |
| !!! | CTGTTATTTTTTCCAAAACA+GGG | - | chr1.4:51067970-51067989 | MS.gene47387:CDS | 25.0% |
| !!! | GAAACAAACAAAGTATTTTC+TGG | + | chr1.4:51065992-51066011 | None:intergenic | 25.0% |
| !!! | TGATGAGTTTTAGTTAAGAT+TGG | - | chr1.4:51065853-51065872 | MS.gene47387:CDS | 25.0% |
| !!! | TGCATTTCTTTTAGTTCTAA+GGG | + | chr1.4:51068334-51068353 | None:intergenic | 25.0% |
| !!! | TTTCAAACAGTTTTGTGAAT+TGG | - | chr1.4:51067927-51067946 | MS.gene47387:CDS | 25.0% |
| !!! | TTTTAACTCTTCGATTCTTA+AGG | + | chr1.4:51065969-51065988 | None:intergenic | 25.0% |
| !!! | TTTTTTACCTCTCTGTATTA+TGG | - | chr1.4:51067123-51067142 | MS.gene47387:CDS | 25.0% |
| AAACTGTCAAGAAAGATAGA+TGG | + | chr1.4:51066873-51066892 | None:intergenic | 30.0% | |
| AATAAAGAGATATTCCATCG+TGG | + | chr1.4:51068822-51068841 | None:intergenic | 30.0% | |
| AATCACAACAGGATGATTAT+AGG | - | chr1.4:51067257-51067276 | MS.gene47387:intron | 30.0% | |
| AATGTTATAGCAATAACCTC+CGG | - | chr1.4:51067799-51067818 | MS.gene47387:intron | 30.0% | |
| ACTTGGTCAAATACAAAAAC+AGG | + | chr1.4:51068675-51068694 | None:intergenic | 30.0% | |
| ATCATCCTGTTGTGATTTAA+TGG | + | chr1.4:51067254-51067273 | None:intergenic | 30.0% | |
| ATTCATTATGTCTCTCATGT+CGG | - | chr1.4:51065132-51065151 | MS.gene47387:intron | 30.0% | |
| CAAATACAGATATAGTTCCA+AGG | - | chr1.4:51068057-51068076 | MS.gene47387:intron | 30.0% | |
| CAACAAAAAAAGTTCGGATT+TGG | + | chr1.4:51067044-51067063 | None:intergenic | 30.0% | |
| CAAGACCATTAAATCAAATG+GGG | + | chr1.4:51068604-51068623 | None:intergenic | 30.0% | |
| CTAAATGCAAACTTTCACAA+GGG | + | chr1.4:51066684-51066703 | None:intergenic | 30.0% | |
| CTTAGAACTAAAAGAAATGC+AGG | - | chr1.4:51068333-51068352 | MS.gene47387:intron | 30.0% | |
| CTTCGATTCTTAAGGAAAAT+GGG | + | chr1.4:51065961-51065980 | None:intergenic | 30.0% | |
| GACAAGACCATTAAATCAAA+TGG | + | chr1.4:51068606-51068625 | None:intergenic | 30.0% | |
| GACTAGTATACTTACTTCTA+AGG | - | chr1.4:51064894-51064913 | MS.gene47387:CDS | 30.0% | |
| GATAATAAACAGGAAAGACA+CGG | + | chr1.4:51068131-51068150 | None:intergenic | 30.0% | |
| GCATTAAAAGCTTGAAGAAA+AGG | + | chr1.4:51069088-51069107 | None:intergenic | 30.0% | |
| GGGTTAAATAGCAATGTAAT+TGG | + | chr1.4:51067199-51067218 | None:intergenic | 30.0% | |
| TAAATGAATACCTTGATGTC+AGG | + | chr1.4:51065794-51065813 | None:intergenic | 30.0% | |
| TAAGTGCAGAGTAATCAAAT+TGG | - | chr1.4:51066910-51066929 | MS.gene47387:intron | 30.0% | |
| TAGTACTTAACTTTGATTGG+CGG | + | chr1.4:51068506-51068525 | None:intergenic | 30.0% | |
| TCATGAAAAAACAGCTTATG+AGG | + | chr1.4:51065288-51065307 | None:intergenic | 30.0% | |
| TCTAAATGCAAACTTTCACA+AGG | + | chr1.4:51066685-51066704 | None:intergenic | 30.0% | |
| TCTTCGATTCTTAAGGAAAA+TGG | + | chr1.4:51065962-51065981 | None:intergenic | 30.0% | |
| TTCGATTCTTAAGGAAAATG+GGG | + | chr1.4:51065960-51065979 | None:intergenic | 30.0% | |
| ! | AAAAATTTCATCAAAGCACC+AGG | + | chr1.4:51068786-51068805 | None:intergenic | 30.0% |
| ! | AACTATGAAAAACCCTGTTT+TGG | + | chr1.4:51067985-51068004 | None:intergenic | 30.0% |
| ! | AAGTTTGCATTTAGAATCTC+TGG | - | chr1.4:51066690-51066709 | MS.gene47387:intron | 30.0% |
| ! | AATTTGGAATTGATTGATGG+AGG | - | chr1.4:51066982-51067001 | MS.gene47387:intron | 30.0% |
| ! | GAAATTGTGGATTTTGTGAT+AGG | - | chr1.4:51065601-51065620 | MS.gene47387:CDS | 30.0% |
| ! | TAAACTTCCAAAGGATGTTT+TGG | - | chr1.4:51065664-51065683 | MS.gene47387:intron | 30.0% |
| ! | TATGTTCTTGTTCTTGTTGT+TGG | - | chr1.4:51065044-51065063 | MS.gene47387:intron | 30.0% |
| ! | TTATGAATGGTTTGAAACGA+GGG | + | chr1.4:51064678-51064697 | None:intergenic | 30.0% |
| !! | ATTTTTGAATTTTCTGGCAC+TGG | - | chr1.4:51065399-51065418 | MS.gene47387:intron | 30.0% |
| !! | GTATTTTCATTTAAGATCCG+TGG | - | chr1.4:51065623-51065642 | MS.gene47387:CDS | 30.0% |
| !!! | CTGCATTTCTTTTAGTTCTA+AGG | + | chr1.4:51068335-51068354 | None:intergenic | 30.0% |
| !!! | TATACTCATTGTTTTGATGC+TGG | - | chr1.4:51066832-51066851 | MS.gene47387:intron | 30.0% |
| !!! | TTTGTTTTTTACCTTTGCAG+TGG | - | chr1.4:51066063-51066082 | MS.gene47387:intron | 30.0% |
| AAAAGAAATGCAGGAGAGAA+TGG | - | chr1.4:51068342-51068361 | MS.gene47387:intron | 35.0% | |
| AATCTAGCCATAATACAGAG+AGG | + | chr1.4:51067133-51067152 | None:intergenic | 35.0% | |
| ACAAACAAAACAGCTCCATT+CGG | + | chr1.4:51067563-51067582 | None:intergenic | 35.0% | |
| AGAAACCATTTCAACAGGTT+TGG | + | chr1.4:51064722-51064741 | None:intergenic | 35.0% | |
| AGAAAGCTGTTGTTCTTTAC+AGG | - | chr1.4:51068080-51068099 | MS.gene47387:intron | 35.0% | |
| AGAACCTCATTCTGAATATC+AGG | + | chr1.4:51068738-51068757 | None:intergenic | 35.0% | |
| AGGACATGTTTGAGGAAAAA+AGG | - | chr1.4:51067698-51067717 | MS.gene47387:intron | 35.0% | |
| ATCGAAATTCATGTTTGCTC+CGG | + | chr1.4:51067821-51067840 | None:intergenic | 35.0% | |
| ATTATAGTCATACCCAAGTC+CGG | + | chr1.4:51069051-51069070 | None:intergenic | 35.0% | |
| ATTTATCCTCTTCACGTAAG+CGG | + | chr1.4:51066327-51066346 | None:intergenic | 35.0% | |
| CCATCATATTATAAGCTCCA+CGG | + | chr1.4:51065643-51065662 | None:intergenic | 35.0% | |
| CTCAAATAGAGCTTCTACAA+TGG | + | chr1.4:51067505-51067524 | None:intergenic | 35.0% | |
| GAAGCATACTGCAAGTATTA+TGG | - | chr1.4:51067763-51067782 | MS.gene47387:intron | 35.0% | |
| GAAGTAGTTGCCATAGATAA+TGG | + | chr1.4:51066749-51066768 | None:intergenic | 35.0% | |
| GTAAAATCTAGCTGATTGTC+AGG | + | chr1.4:51065906-51065925 | None:intergenic | 35.0% | |
| GTTCACAGGTGAAGATAATT+GGG | - | chr1.4:51066452-51066471 | MS.gene47387:intron | 35.0% | |
| TACAAGCCATTAGATTGCAT+TGG | + | chr1.4:51068935-51068954 | None:intergenic | 35.0% | |
| TATGATGGCTAAACTTCCAA+AGG | - | chr1.4:51065655-51065674 | MS.gene47387:intron | 35.0% | |
| TATGGCTAGATTTAGTGAAG+CGG | - | chr1.4:51067141-51067160 | MS.gene47387:CDS | 35.0% | |
| TGCAAGTATTATGGACTCAA+GGG | - | chr1.4:51067772-51067791 | MS.gene47387:intron | 35.0% | |
| TGTTCACAGGTGAAGATAAT+TGG | - | chr1.4:51066451-51066470 | MS.gene47387:intron | 35.0% | |
| TGTTGAATCACCTCTTGAAT+TGG | - | chr1.4:51064930-51064949 | MS.gene47387:CDS | 35.0% | |
| TGTTTGTATCCGTGAGAATT+GGG | - | chr1.4:51067576-51067595 | MS.gene47387:intron | 35.0% | |
| TTCACAGGTGAAGATAATTG+GGG | - | chr1.4:51066453-51066472 | MS.gene47387:intron | 35.0% | |
| TTGTTTGTATCCGTGAGAAT+TGG | - | chr1.4:51067575-51067594 | MS.gene47387:intron | 35.0% | |
| ! | CATTAGATTGCATTGGTCAA+CGG | + | chr1.4:51068928-51068947 | None:intergenic | 35.0% |
| ! | GATTATCTAGGACTTGACAT+CGG | - | chr1.4:51067662-51067681 | MS.gene47387:intron | 35.0% |
| ! | GTTATGAATGGTTTGAAACG+AGG | + | chr1.4:51064679-51064698 | None:intergenic | 35.0% |
| ! | TGAGGAAAAAAGGAGCATAT+TGG | - | chr1.4:51067708-51067727 | MS.gene47387:intron | 35.0% |
| ! | TGCAATTTGTGCATCGATAA+AGG | - | chr1.4:51066645-51066664 | MS.gene47387:intron | 35.0% |
| !! | AACATGCAGTATTTGACTTG+AGG | + | chr1.4:51068887-51068906 | None:intergenic | 35.0% |
| !! | ACAGACTTGGTGTTAATGTT+TGG | - | chr1.4:51064968-51064987 | MS.gene47387:intron | 35.0% |
| !! | GAGTTGATGATAGTACTTAC+AGG | + | chr1.4:51065015-51065034 | None:intergenic | 35.0% |
| !! | GTAACTGAACTTGCTAATGT+CGG | - | chr1.4:51067853-51067872 | MS.gene47387:intron | 35.0% |
| !! | TGTGTTGATCATTTAGCTTG+AGG | - | chr1.4:51065533-51065552 | MS.gene47387:intron | 35.0% |
| !!! | AAAGGATGTTTTGGAGAAAG+GGG | - | chr1.4:51065673-51065692 | MS.gene47387:intron | 35.0% |
| !!! | CAAAGGATGTTTTGGAGAAA+GGG | - | chr1.4:51065672-51065691 | MS.gene47387:intron | 35.0% |
| AAGAACAACAGCTTTCTCCT+TGG | + | chr1.4:51068077-51068096 | None:intergenic | 40.0% | |
| ACACACACCACCATTATCTA+TGG | - | chr1.4:51066736-51066755 | MS.gene47387:intron | 40.0% | |
| ACTTAACTTTGATTGGCGGT+TGG | + | chr1.4:51068502-51068521 | None:intergenic | 40.0% | |
| AGGCACAAAGATTGCATGAA+CGG | + | chr1.4:51066273-51066292 | None:intergenic | 40.0% | |
| AGTCCATACAGAGAAAACTC+TGG | - | chr1.4:51067313-51067332 | MS.gene47387:intron | 40.0% | |
| AGTCTCCAAACCTGTTGAAA+TGG | - | chr1.4:51064714-51064733 | MS.gene47387:intron | 40.0% | |
| ATATGCTTGTGCTTCATCGT+AGG | + | chr1.4:51066135-51066154 | None:intergenic | 40.0% | |
| ATGACATCGGGATGATCAAA+AGG | + | chr1.4:51066200-51066219 | None:intergenic | 40.0% | |
| ATGGCTAGATTTAGTGAAGC+GGG | - | chr1.4:51067142-51067161 | MS.gene47387:CDS | 40.0% | |
| ATTATAGGTTCGATTCCCCA+CGG | - | chr1.4:51067272-51067291 | MS.gene47387:intron | 40.0% | |
| ATTCAATCTCTTGGCAGACA+TGG | + | chr1.4:51065738-51065757 | None:intergenic | 40.0% | |
| CAACTCTTCCAAGTGAACAA+AGG | + | chr1.4:51066402-51066421 | None:intergenic | 40.0% | |
| CAAGAGATTGAATTGCAACG+CGG | - | chr1.4:51065745-51065764 | MS.gene47387:CDS | 40.0% | |
| CAAGTATTATGGACTCAAGG+GGG | - | chr1.4:51067774-51067793 | MS.gene47387:intron | 40.0% | |
| CATCGTAGGAATCTCCAATA+AGG | + | chr1.4:51066121-51066140 | None:intergenic | 40.0% | |
| CCGTGGAGCTTATAATATGA+TGG | - | chr1.4:51065640-51065659 | MS.gene47387:intron | 40.0% | |
| CCTCATTCTGAATATCAGGT+CGG | + | chr1.4:51068734-51068753 | None:intergenic | 40.0% | |
| CCTTTCTCCAAAACATCCTT+TGG | + | chr1.4:51065674-51065693 | None:intergenic | 40.0% | |
| CGTTGACCAATGCAATCTAA+TGG | - | chr1.4:51068926-51068945 | MS.gene47387:CDS | 40.0% | |
| CTCATTCTGAATATCAGGTC+GGG | + | chr1.4:51068733-51068752 | None:intergenic | 40.0% | |
| CTGCAAGTATTATGGACTCA+AGG | - | chr1.4:51067771-51067790 | MS.gene47387:intron | 40.0% | |
| CTTAACTTTGATTGGCGGTT+GGG | + | chr1.4:51068501-51068520 | None:intergenic | 40.0% | |
| GAAAGATCATTTGCGTCACA+TGG | - | chr1.4:51068411-51068430 | MS.gene47387:intron | 40.0% | |
| GAACTGAATTTCTTCTGACC+TGG | - | chr1.4:51068005-51068024 | MS.gene47387:CDS | 40.0% | |
| GAAGCTCTATTTGAGTACAC+AGG | - | chr1.4:51067510-51067529 | MS.gene47387:CDS | 40.0% | |
| GACAACTAAGTGTTATGCCA+AGG | - | chr1.4:51068255-51068274 | MS.gene47387:intron | 40.0% | |
| GATCATCCCGATGTCATTAT+GGG | - | chr1.4:51066203-51066222 | MS.gene47387:intron | 40.0% | |
| GATGTCAATATTCTGAGCAG+TGG | + | chr1.4:51068177-51068196 | None:intergenic | 40.0% | |
| GATTGTGGAGTAAGTGCTAT+GGG | - | chr1.4:51064865-51064884 | MS.gene47387:CDS | 40.0% | |
| GCAAACTTTCACAAGGGAAA+GGG | + | chr1.4:51066678-51066697 | None:intergenic | 40.0% | |
| GCAAGTATTATGGACTCAAG+GGG | - | chr1.4:51067773-51067792 | MS.gene47387:intron | 40.0% | |
| GCTGGAGCAAATGTATTAGT+TGG | - | chr1.4:51068978-51068997 | MS.gene47387:CDS | 40.0% | |
| GGGCTTAGTAATCCGAATTT+CGG | + | chr1.4:51065940-51065959 | None:intergenic | 40.0% | |
| GTGCAATGGAAAAACCTATC+AGG | + | chr1.4:51066376-51066395 | None:intergenic | 40.0% | |
| TAATCCGAATTTCGGTTACG+AGG | + | chr1.4:51065932-51065951 | None:intergenic | 40.0% | |
| TCGATGCACAAATTGCATCA+CGG | + | chr1.4:51066642-51066661 | None:intergenic | 40.0% | |
| TGATCATCCCGATGTCATTA+TGG | - | chr1.4:51066202-51066221 | MS.gene47387:intron | 40.0% | |
| TGATTGTGGAGTAAGTGCTA+TGG | - | chr1.4:51064864-51064883 | MS.gene47387:CDS | 40.0% | |
| TGCAAACTTTCACAAGGGAA+AGG | + | chr1.4:51066679-51066698 | None:intergenic | 40.0% | |
| TGCAAATTCTAACCTGTGCA+CGG | + | chr1.4:51068851-51068870 | None:intergenic | 40.0% | |
| TGTCAGGAATCAAACTTGAG+TGG | + | chr1.4:51065890-51065909 | None:intergenic | 40.0% | |
| TTTACCTTTCCAGAAAGACC+TGG | - | chr1.4:51068765-51068784 | MS.gene47387:CDS | 40.0% | |
| TTTATTCCATTACCGTGCAC+AGG | - | chr1.4:51068836-51068855 | MS.gene47387:CDS | 40.0% | |
| ! | AAGCCAGAGTTTTCTCTGTA+TGG | + | chr1.4:51067319-51067338 | None:intergenic | 40.0% |
| ! | AATCCAGAGGTTTGTTTGCA+TGG | - | chr1.4:51066344-51066363 | MS.gene47387:intron | 40.0% |
| ! | AATGGTTTGAAACGAGGGTT+AGG | + | chr1.4:51064673-51064692 | None:intergenic | 40.0% |
| ! | AGCTGCCCCATTTGATTTAA+TGG | - | chr1.4:51068596-51068615 | MS.gene47387:intron | 40.0% |
| ! | ATGGTTTGAAACGAGGGTTA+GGG | + | chr1.4:51064672-51064691 | None:intergenic | 40.0% |
| ! | CAAAACTGTTTGAAACTGCC+AGG | + | chr1.4:51067922-51067941 | None:intergenic | 40.0% |
| ! | GATATTCCATCGTGGACTAA+AGG | + | chr1.4:51068814-51068833 | None:intergenic | 40.0% |
| ! | GTAGTTGCCATAGATAATGG+TGG | + | chr1.4:51066746-51066765 | None:intergenic | 40.0% |
| !! | GAAAGCACTGCAGATTATCT+AGG | - | chr1.4:51067650-51067669 | MS.gene47387:intron | 40.0% |
| !! | TGGTGCCATTAAATCACAAC+AGG | - | chr1.4:51067246-51067265 | MS.gene47387:intron | 40.0% |
| !! | TTGGCTTTGTCACTTCATCA+TGG | - | chr1.4:51066499-51066518 | MS.gene47387:intron | 40.0% |
| !!! | CCAAAGGATGTTTTGGAGAA+AGG | - | chr1.4:51065671-51065690 | MS.gene47387:intron | 40.0% |
| AAGCTGACGTCAGAGACTAA+GGG | - | chr1.4:51065156-51065175 | MS.gene47387:intron | 45.0% | |
| ACACCATGCAAACAAACCTC+TGG | + | chr1.4:51066350-51066369 | None:intergenic | 45.0% | |
| ACAGGTGAAGATAATTGGGG+TGG | - | chr1.4:51066456-51066475 | MS.gene47387:intron | 45.0% | |
| ACATCGGGATGATCAAAAGG+AGG | + | chr1.4:51066197-51066216 | None:intergenic | 45.0% | |
| ACATCGGTAAACCTTGTTGC+AGG | - | chr1.4:51067678-51067697 | MS.gene47387:intron | 45.0% | |
| ACCCACTGATGCAAATGCAT+TGG | - | chr1.4:51066480-51066499 | MS.gene47387:intron | 45.0% | |
| ACCTTTGCAGTGGAAATCTG+TGG | - | chr1.4:51066073-51066092 | MS.gene47387:intron | 45.0% | |
| ACGTCAGAGACTAAGGGTAA+GGG | - | chr1.4:51065162-51065181 | MS.gene47387:intron | 45.0% | |
| ACTTCATCATGGCCAAAGAG+TGG | - | chr1.4:51066510-51066529 | MS.gene47387:intron | 45.0% | |
| AGATGGTGTGGCTGTAAAAG+AGG | - | chr1.4:51066558-51066577 | MS.gene47387:intron | 45.0% | |
| AGCCAATGCATTTGCATCAG+TGG | + | chr1.4:51066485-51066504 | None:intergenic | 45.0% | |
| AGTTACCACTCCTGACATCA+AGG | - | chr1.4:51065781-51065800 | MS.gene47387:CDS | 45.0% | |
| ATTATGGGTCAGGGAACTGT+CGG | - | chr1.4:51066218-51066237 | MS.gene47387:intron | 45.0% | |
| CATGCAATCTTTGTGCCTGT+GGG | - | chr1.4:51066275-51066294 | MS.gene47387:intron | 45.0% | |
| CCAAAGCTTTCTGACAGACT+TGG | - | chr1.4:51064955-51064974 | MS.gene47387:intron | 45.0% | |
| CCAAGTCTGTCAGAAAGCTT+TGG | + | chr1.4:51064958-51064977 | None:intergenic | 45.0% | |
| CCGACCTGATATTCAGAATG+AGG | - | chr1.4:51068731-51068750 | MS.gene47387:CDS | 45.0% | |
| CCTACCTCGTAACCGAAATT+CGG | - | chr1.4:51065925-51065944 | MS.gene47387:CDS | 45.0% | |
| CGCGTTGCAATTCAATCTCT+TGG | + | chr1.4:51065747-51065766 | None:intergenic | 45.0% | |
| CGTGAAGAGGATAAATCCAG+AGG | - | chr1.4:51066331-51066350 | MS.gene47387:intron | 45.0% | |
| CTAGATTTAGTGAAGCGGGT+TGG | - | chr1.4:51067146-51067165 | MS.gene47387:CDS | 45.0% | |
| CTCAAACATGTCCTGCAACA+AGG | + | chr1.4:51067692-51067711 | None:intergenic | 45.0% | |
| CTTGTTGCAGGACATGTTTG+AGG | - | chr1.4:51067690-51067709 | MS.gene47387:intron | 45.0% | |
| GAAATTCATGTTTGCTCCGG+AGG | + | chr1.4:51067818-51067837 | None:intergenic | 45.0% | |
| GAATACCTTGATGTCAGGAG+TGG | + | chr1.4:51065789-51065808 | None:intergenic | 45.0% | |
| GATTCACTTCAGTATCCACC+TGG | - | chr1.4:51064796-51064815 | MS.gene47387:intron | 45.0% | |
| GCCAATGCATTTGCATCAGT+GGG | + | chr1.4:51066484-51066503 | None:intergenic | 45.0% | |
| GGAGCAGAAACCATTTCAAC+AGG | + | chr1.4:51064727-51064746 | None:intergenic | 45.0% | |
| GGCACAAAGATTGCATGAAC+GGG | + | chr1.4:51066272-51066291 | None:intergenic | 45.0% | |
| GGTGGATACTGAAGTGAATC+CGG | + | chr1.4:51064796-51064815 | None:intergenic | 45.0% | |
| TAAGCTGACGTCAGAGACTA+AGG | - | chr1.4:51065155-51065174 | MS.gene47387:intron | 45.0% | |
| TAAGCTGTCATTCGTCCGAA+TGG | - | chr1.4:51067545-51067564 | MS.gene47387:CDS | 45.0% | |
| TAGACTCCTTTAGTCCACGA+TGG | - | chr1.4:51068805-51068824 | MS.gene47387:CDS | 45.0% | |
| TAGTGTGGTGCATTCTGTGA+CGG | + | chr1.4:51064642-51064661 | None:intergenic | 45.0% | |
| TCAGCTGGAAATCATGCTCA+AGG | - | chr1.4:51065707-51065726 | MS.gene47387:intron | 45.0% | |
| TCATGCAATCTTTGTGCCTG+TGG | - | chr1.4:51066274-51066293 | MS.gene47387:intron | 45.0% | |
| TCCACAGATTTCCACTGCAA+AGG | + | chr1.4:51066077-51066096 | None:intergenic | 45.0% | |
| TCCCTGACCCATAATGACAT+CGG | + | chr1.4:51066213-51066232 | None:intergenic | 45.0% | |
| TCTGCTGTTAACTGTCATGC+CGG | - | chr1.4:51067891-51067910 | MS.gene47387:CDS | 45.0% | |
| TGAATTTCTTCTGACCTGGC+AGG | - | chr1.4:51068009-51068028 | MS.gene47387:CDS | 45.0% | |
| TTCAACAGGTTTGGAGACTG+CGG | + | chr1.4:51064713-51064732 | None:intergenic | 45.0% | |
| TTCTAACCTGTGCACGGTAA+TGG | + | chr1.4:51068845-51068864 | None:intergenic | 45.0% | |
| TTGATGTCAGGAGTGGTAAC+TGG | + | chr1.4:51065782-51065801 | None:intergenic | 45.0% | |
| ! | AAGAAGCGTGCTATAGAGGA+TGG | - | chr1.4:51066158-51066177 | MS.gene47387:intron | 45.0% |
| ! | ATCAAAGCACCAGGTCTTTC+TGG | + | chr1.4:51068777-51068796 | None:intergenic | 45.0% |
| ! | ATGGCTTGTACTTGCTGCTT+CGG | - | chr1.4:51068945-51068964 | MS.gene47387:CDS | 45.0% |
| ! | ATTGTGTTGGTGTGCAGTGT+TGG | - | chr1.4:51068298-51068317 | MS.gene47387:intron | 45.0% |
| ! | CAATCTCTCAGACGTTGACT+TGG | - | chr1.4:51068387-51068406 | MS.gene47387:intron | 45.0% |
| ! | GGAAACTTTTCGCTTGTGCA+AGG | - | chr1.4:51066588-51066607 | MS.gene47387:intron | 45.0% |
| ! | TCATGGCCAAAGAGTGGTTT+TGG | - | chr1.4:51066516-51066535 | MS.gene47387:intron | 45.0% |
| ! | TGCTAAGAAGCGTGCTATAG+AGG | - | chr1.4:51066154-51066173 | MS.gene47387:intron | 45.0% |
| ! | TGCTCCTTTTGTTGAGTCAC+CGG | - | chr1.4:51064741-51064760 | MS.gene47387:intron | 45.0% |
| ! | TTTTCGCTTGTGCAAGGAGT+TGG | - | chr1.4:51066594-51066613 | MS.gene47387:intron | 45.0% |
| !! | TTGCATGGTGTTGTCCTGAT+AGG | - | chr1.4:51066359-51066378 | MS.gene47387:intron | 45.0% |
| !! | TTGTGCAAGGAGTTGGTAGA+TGG | - | chr1.4:51066601-51066620 | MS.gene47387:intron | 45.0% |
| !! | AATGAATAATAAAATATTAT+TGG | + | chr1.4:51068281-51068300 | None:intergenic | 5.0% |
| !!! | ATTTTTATTAATTTGTTTTT+TGG | - | chr1.4:51065500-51065519 | MS.gene47387:intron | 5.0% |
| !!! | TTTTCAAAAAAAAAAAAAAA+AGG | - | chr1.4:51067412-51067431 | MS.gene47387:CDS | 5.0% |
| !!! | TTTTTATTAATTTGTTTTTT+GGG | - | chr1.4:51065501-51065520 | MS.gene47387:intron | 5.0% |
| AATTCCTCCATCTCGCTGCT+TGG | + | chr1.4:51069014-51069033 | None:intergenic | 50.0% | |
| ACTAAGGGTAAGGGTCCGTT+TGG | - | chr1.4:51065171-51065190 | MS.gene47387:intron | 50.0% | |
| AGTGGAAATCTGTGGAGAGG+TGG | - | chr1.4:51066081-51066100 | MS.gene47387:intron | 50.0% | |
| ATAGTCATACCCAAGTCCGG+TGG | + | chr1.4:51069048-51069067 | None:intergenic | 50.0% | |
| ATCGTAGCGCCTCCATTGTT+TGG | + | chr1.4:51064570-51064589 | None:intergenic | 50.0% | |
| ATTTCTTCTGACCTGGCAGG+TGG | - | chr1.4:51068012-51068031 | MS.gene47387:CDS | 50.0% | |
| CAAGAACCGACTAATCCGAG+GGG | + | chr1.4:51067378-51067397 | None:intergenic | 50.0% | |
| CAGTATCCACCTGGTTACGT+TGG | - | chr1.4:51064805-51064824 | MS.gene47387:intron | 50.0% | |
| CATCTGCAAATCCTCCAACC+TGG | + | chr1.4:51066543-51066562 | None:intergenic | 50.0% | |
| CCCGATGTCATTATGGGTCA+GGG | - | chr1.4:51066209-51066228 | MS.gene47387:intron | 50.0% | |
| CCCTGACCCATAATGACATC+GGG | + | chr1.4:51066212-51066231 | None:intergenic | 50.0% | |
| CCGAATTTCGGTTACGAGGT+AGG | + | chr1.4:51065928-51065947 | None:intergenic | 50.0% | |
| CCTGGTCCAAAACCACTCTT+TGG | + | chr1.4:51066525-51066544 | None:intergenic | 50.0% | |
| GAATTCAACGATCGTGCCAC+CGG | - | chr1.4:51069029-51069048 | MS.gene47387:CDS | 50.0% | |
| GACGTCAGAGACTAAGGGTA+AGG | - | chr1.4:51065161-51065180 | MS.gene47387:intron | 50.0% | |
| GCAAGAACCGACTAATCCGA+GGG | + | chr1.4:51067379-51067398 | None:intergenic | 50.0% | |
| GCATTCTGTGACGGTGGTTA+CGG | + | chr1.4:51064633-51064652 | None:intergenic | 50.0% | |
| GGGGTTATATGCTCTTCAGC+TGG | - | chr1.4:51065692-51065711 | MS.gene47387:intron | 50.0% | |
| GGTGTGGCTGTAAAAGAGGT+TGG | - | chr1.4:51066562-51066581 | MS.gene47387:intron | 50.0% | |
| GGTTAGGGTGAAGAGTAGTG+TGG | + | chr1.4:51064657-51064676 | None:intergenic | 50.0% | |
| GTGGAAATCTGTGGAGAGGT+GGG | - | chr1.4:51066082-51066101 | MS.gene47387:intron | 50.0% | |
| TCCCGATGTCATTATGGGTC+AGG | - | chr1.4:51066208-51066227 | MS.gene47387:intron | 50.0% | |
| TCGTAGCGCCTCCATTGTTT+GGG | + | chr1.4:51064569-51064588 | None:intergenic | 50.0% | |
| TGCACGTGCCTTTGTTCACT+TGG | - | chr1.4:51066391-51066410 | MS.gene47387:intron | 50.0% | |
| TGCAGTGGAAATCTGTGGAG+AGG | - | chr1.4:51066078-51066097 | MS.gene47387:intron | 50.0% | |
| TGGAAATCTGTGGAGAGGTG+GGG | - | chr1.4:51066083-51066102 | MS.gene47387:intron | 50.0% | |
| TGGAGGATTTGCAGATGGTG+TGG | - | chr1.4:51066546-51066565 | MS.gene47387:intron | 50.0% | |
| TGGCGGTTGGGAATAGTGAA+GGG | + | chr1.4:51068489-51068508 | None:intergenic | 50.0% | |
| TTATGGGTCAGGGAACTGTC+GGG | - | chr1.4:51066219-51066238 | MS.gene47387:intron | 50.0% | |
| TTGGCGGTTGGGAATAGTGA+AGG | + | chr1.4:51068490-51068509 | None:intergenic | 50.0% | |
| TTTAACCAACCCTCGCAAGG+TGG | - | chr1.4:51067338-51067357 | MS.gene47387:CDS | 50.0% | |
| TTTCTTCTGACCTGGCAGGT+GGG | - | chr1.4:51068013-51068032 | MS.gene47387:CDS | 50.0% | |
| ! | AGCACCAGGTCTTTCTGGAA+AGG | + | chr1.4:51068772-51068791 | None:intergenic | 50.0% |
| ! | AGCTTTGGCGCCAATTCAAG+AGG | + | chr1.4:51064943-51064962 | None:intergenic | 50.0% |
| ! | AGGAGCATATTGGAACCAGC+AGG | - | chr1.4:51067718-51067737 | MS.gene47387:intron | 50.0% |
| ! | CAGGTTGGAGGATTTGCAGA+TGG | - | chr1.4:51066541-51066560 | MS.gene47387:intron | 50.0% |
| ! | GCTTTTAACCAACCCTCGCA+AGG | - | chr1.4:51067335-51067354 | MS.gene47387:CDS | 50.0% |
| ! | GGTGGTGATGAAGGTGATTG+TGG | - | chr1.4:51064850-51064869 | MS.gene47387:CDS | 50.0% |
| ! | GTATTGCCGCTTACGTGAAG+AGG | - | chr1.4:51066318-51066337 | MS.gene47387:intron | 50.0% |
| ! | GTGAACAAAGGCACGTGCAA+TGG | + | chr1.4:51066390-51066409 | None:intergenic | 50.0% |
| ! | TCCTTTTGTTGAGTCACCGG+CGG | - | chr1.4:51064744-51064763 | MS.gene47387:intron | 50.0% |
| ! | TGTACTTGCTGCTTCGGACA+GGG | - | chr1.4:51068951-51068970 | MS.gene47387:CDS | 50.0% |
| ! | TTGTACTTGCTGCTTCGGAC+AGG | - | chr1.4:51068950-51068969 | MS.gene47387:CDS | 50.0% |
| !! | ATTCCCCACGGTGCTGATTT+CGG | - | chr1.4:51067284-51067303 | MS.gene47387:intron | 50.0% |
| !! | ATTGGACCCCTCGGATTAGT+CGG | - | chr1.4:51067369-51067388 | MS.gene47387:CDS | 50.0% |
| !! | GGCTGTAAAAGAGGTTGGTG+AGG | - | chr1.4:51066567-51066586 | MS.gene47387:intron | 50.0% |
| !! | GGTGCTACTGTGGTCCTTAT+TGG | - | chr1.4:51066104-51066123 | MS.gene47387:intron | 50.0% |
| !!! | AGAGTGGTTTTGGACCAGGT+TGG | - | chr1.4:51066526-51066545 | MS.gene47387:intron | 50.0% |
| !!! | CCAAAGAGTGGTTTTGGACC+AGG | - | chr1.4:51066522-51066541 | MS.gene47387:intron | 50.0% |
| AACAGGTTTGGAGACTGCGG+CGG | + | chr1.4:51064710-51064729 | None:intergenic | 55.0% | |
| ATCTTTGTGCCTGTGGGAGG+TGG | - | chr1.4:51066281-51066300 | MS.gene47387:intron | 55.0% | |
| CATGAACGGGACGCTTCATC+TGG | + | chr1.4:51066259-51066278 | None:intergenic | 55.0% | |
| CGCAAGAACCGACTAATCCG+AGG | + | chr1.4:51067380-51067399 | None:intergenic | 55.0% | |
| GCAATCTTTGTGCCTGTGGG+AGG | - | chr1.4:51066278-51066297 | MS.gene47387:intron | 55.0% | |
| GCGGCGGTGGTTGTTATGAA+TGG | + | chr1.4:51064691-51064710 | None:intergenic | 55.0% | |
| GCTGTTAACTGTCATGCCGG+AGG | - | chr1.4:51067894-51067913 | MS.gene47387:CDS | 55.0% | |
| TCAGGTTCCAAGCAGCGAGA+TGG | - | chr1.4:51069004-51069023 | MS.gene47387:CDS | 55.0% | |
| TCCACCTGGTTACGTTGGAG+CGG | - | chr1.4:51064810-51064829 | MS.gene47387:intron | 55.0% | |
| TCCGAGGTTGAAGGTTTCGC+CGG | - | chr1.4:51064774-51064793 | MS.gene47387:intron | 55.0% | |
| TCCGGCGAAACCTTCAACCT+CGG | + | chr1.4:51064778-51064797 | None:intergenic | 55.0% | |
| TGTGGTGCATTCTGTGACGG+TGG | + | chr1.4:51064639-51064658 | None:intergenic | 55.0% | |
| TTCTGTGACGGTGGTTACGG+AGG | + | chr1.4:51064630-51064649 | None:intergenic | 55.0% | |
| TTCTTCTGACCTGGCAGGTG+GGG | - | chr1.4:51068014-51068033 | MS.gene47387:CDS | 55.0% | |
| TTGAAACTGCCAGGCTCCTC+CGG | + | chr1.4:51067913-51067932 | None:intergenic | 55.0% | |
| ! | AATGGTGGTGTGTGTGCGTG+TGG | + | chr1.4:51066731-51066750 | None:intergenic | 55.0% |
| ! | AGGACACGTGGTGGTGATGA+AGG | - | chr1.4:51064841-51064860 | MS.gene47387:CDS | 55.0% |
| ! | TTTTGTTGAGTCACCGGCGG+CGG | - | chr1.4:51064747-51064766 | MS.gene47387:intron | 55.0% |
| !!! | GTGGTTTTGGACCAGGTTGG+AGG | - | chr1.4:51066529-51066548 | MS.gene47387:intron | 55.0% |
| AACGATCGTGCCACCGGACT+TGG | - | chr1.4:51069035-51069054 | MS.gene47387:CDS | 60.0% | |
| ACCCACCGAAATCAGCACCG+TGG | + | chr1.4:51067292-51067311 | None:intergenic | 60.0% | |
| ACCGCTCCAACGTAACCAGG+TGG | + | chr1.4:51064814-51064833 | None:intergenic | 60.0% | |
| ACGATCGTGCCACCGGACTT+GGG | - | chr1.4:51069036-51069055 | MS.gene47387:CDS | 60.0% | |
| ACGTTGGAGCGGTTCCTGAC+AGG | - | chr1.4:51064821-51064840 | MS.gene47387:CDS | 60.0% | |
| AGGTTGTGGCTGTGTGGTGG+TGG | + | chr1.4:51064599-51064618 | None:intergenic | 60.0% | |
| ATGAGACCACCACCTCCCAC+AGG | + | chr1.4:51066293-51066312 | None:intergenic | 60.0% | |
| ATTCATCTGCCCCACCTGCC+AGG | + | chr1.4:51068026-51068045 | None:intergenic | 60.0% | |
| CCACCGAAATCAGCACCGTG+GGG | + | chr1.4:51067290-51067309 | None:intergenic | 60.0% | |
| CCCACCGAAATCAGCACCGT+GGG | + | chr1.4:51067291-51067310 | None:intergenic | 60.0% | |
| GAGAGAGAGCTGGGAGTGGT+AGG | - | chr1.4:51067168-51067187 | MS.gene47387:CDS | 60.0% | |
| GAGGTGAGGTTGTGGCTGTG+TGG | + | chr1.4:51064605-51064624 | None:intergenic | 60.0% | |
| GCCGCCGGTGACTCAACAAA+AGG | + | chr1.4:51064748-51064767 | None:intergenic | 60.0% | |
| GGAACCGCTCCAACGTAACC+AGG | + | chr1.4:51064817-51064836 | None:intergenic | 60.0% | |
| GGCGAAACCTTCAACCTCGG+AGG | + | chr1.4:51064775-51064794 | None:intergenic | 60.0% | |
| GGTTCCAAGCAGCGAGATGG+AGG | - | chr1.4:51069007-51069026 | MS.gene47387:CDS | 60.0% | |
| GTGAGGTTGTGGCTGTGTGG+TGG | + | chr1.4:51064602-51064621 | None:intergenic | 60.0% | |
| GTTCCTGACAGGACACGTGG+TGG | - | chr1.4:51064832-51064851 | MS.gene47387:CDS | 60.0% | |
| GTTGGAGAGAGAGCTGGGAG+TGG | - | chr1.4:51067164-51067183 | MS.gene47387:CDS | 60.0% | |
| TCACCACCACGTGTCCTGTC+AGG | + | chr1.4:51064838-51064857 | None:intergenic | 60.0% | |
| TGCTTCGGACAGGGTGAAGC+TGG | - | chr1.4:51068960-51068979 | MS.gene47387:CDS | 60.0% | |
| TGGTTACGGAGGAGGAGGTG+AGG | + | chr1.4:51064619-51064638 | None:intergenic | 60.0% | |
| TGTGACGGTGGTTACGGAGG+AGG | + | chr1.4:51064627-51064646 | None:intergenic | 60.0% | |
| TTTGTGCCTGTGGGAGGTGG+TGG | - | chr1.4:51066284-51066303 | MS.gene47387:intron | 60.0% | |
| ! | GGAGGTGGTGGTCTCATTGC+TGG | - | chr1.4:51066296-51066315 | MS.gene47387:intron | 60.0% |
| !! | AAGCGGGTTGGAGAGAGAGC+TGG | - | chr1.4:51067158-51067177 | MS.gene47387:CDS | 60.0% |
| !! | AGCGGGTTGGAGAGAGAGCT+GGG | - | chr1.4:51067159-51067178 | MS.gene47387:CDS | 60.0% |
| !! | CCCACGGTGCTGATTTCGGT+GGG | - | chr1.4:51067288-51067307 | MS.gene47387:intron | 60.0% |
| !! | TTGTGGCTGTGTGGTGGTGG+AGG | + | chr1.4:51064596-51064615 | None:intergenic | 60.0% |
| ACCAACCCTCGCAAGGTGGC+CGG | - | chr1.4:51067342-51067361 | MS.gene47387:CDS | 65.0% | |
| ACTGTCATGCCGGAGGAGCC+TGG | - | chr1.4:51067901-51067920 | MS.gene47387:CDS | 65.0% | |
| AGGTTTGGAGACTGCGGCGG+CGG | + | chr1.4:51064707-51064726 | None:intergenic | 65.0% | |
| CGGAGGAGGAGGTGAGGTTG+TGG | + | chr1.4:51064613-51064632 | None:intergenic | 65.0% | |
| GACGGTGGTTACGGAGGAGG+AGG | + | chr1.4:51064624-51064643 | None:intergenic | 65.0% | |
| GCAGGCGCTCTTGCTCTTGC+TGG | - | chr1.4:51067736-51067755 | MS.gene47387:intron | 65.0% | |
| GCGGTTCCTGACAGGACACG+TGG | - | chr1.4:51064829-51064848 | MS.gene47387:CDS | 65.0% | |
| GGGTCAGGGAACTGTCGGGA+TGG | - | chr1.4:51066223-51066242 | MS.gene47387:intron | 65.0% | |
| TCCGAGGGGTCCAATCCCAC+CGG | + | chr1.4:51067364-51067383 | None:intergenic | 65.0% | |
| !! | CCCCACGGTGCTGATTTCGG+TGG | - | chr1.4:51067287-51067306 | MS.gene47387:intron | 65.0% |
| !! | GCAAGAGCAAGAGCGCCTGC+TGG | + | chr1.4:51067736-51067755 | None:intergenic | 65.0% |
| !! | GGAGAGGTGGGGTGCTACTG+TGG | - | chr1.4:51066094-51066113 | MS.gene47387:intron | 65.0% |
| AACCCTCGCAAGGTGGCCGG+TGG | - | chr1.4:51067345-51067364 | MS.gene47387:CDS | 70.0% | |
| ACCCTCGCAAGGTGGCCGGT+GGG | - | chr1.4:51067346-51067365 | MS.gene47387:CDS | 70.0% | |
| ACCGGCCACCTTGCGAGGGT+TGG | + | chr1.4:51067346-51067365 | None:intergenic | 70.0% | |
| ATCCCACCGGCCACCTTGCG+AGG | + | chr1.4:51067351-51067370 | None:intergenic | 70.0% | |
| CGCAAGGTGGCCGGTGGGAT+TGG | - | chr1.4:51067351-51067370 | MS.gene47387:CDS | 70.0% | |
| GCCGGTGGGATTGGACCCCT+CGG | - | chr1.4:51067360-51067379 | MS.gene47387:CDS | 70.0% | |
| GGCGGCTCCTCCGAGGTTGA+AGG | - | chr1.4:51064765-51064784 | MS.gene47387:intron | 70.0% | |
| TCCCACCGGCCACCTTGCGA+GGG | + | chr1.4:51067350-51067369 | None:intergenic | 70.0% | |
| TTTGGAGACTGCGGCGGCGG+TGG | + | chr1.4:51064704-51064723 | None:intergenic | 70.0% | |
| AACCTCGGAGGAGCCGCCGC+CGG | + | chr1.4:51064763-51064782 | None:intergenic | 75.0% | |
| ! | CACCGGCGGCGGCTCCTCCG+AGG | - | chr1.4:51064758-51064777 | MS.gene47387:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 51064562 | 51069112 | 51064562 | ID=MS.gene47387 |
| chr1.4 | mRNA | 51064562 | 51069112 | 51064562 | ID=MS.gene47387.t1;Parent=MS.gene47387 |
| chr1.4 | exon | 51068660 | 51069112 | 51068660 | ID=MS.gene47387.t1.exon1;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51068660 | 51069112 | 51068660 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| chr1.4 | exon | 51067872 | 51068051 | 51067872 | ID=MS.gene47387.t1.exon2;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51067872 | 51068051 | 51067872 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| chr1.4 | exon | 51067322 | 51067591 | 51067322 | ID=MS.gene47387.t1.exon3;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51067322 | 51067591 | 51067322 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| chr1.4 | exon | 51067008 | 51067214 | 51067008 | ID=MS.gene47387.t1.exon4;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51067008 | 51067214 | 51067008 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| chr1.4 | exon | 51065726 | 51065974 | 51065726 | ID=MS.gene47387.t1.exon5;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51065726 | 51065974 | 51065726 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| chr1.4 | exon | 51065573 | 51065643 | 51065573 | ID=MS.gene47387.t1.exon6;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51065573 | 51065643 | 51065573 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| chr1.4 | exon | 51065242 | 51065359 | 51065242 | ID=MS.gene47387.t1.exon7;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51065242 | 51065359 | 51065242 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| chr1.4 | exon | 51064817 | 51064951 | 51064817 | ID=MS.gene47387.t1.exon8;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51064817 | 51064951 | 51064817 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| chr1.4 | exon | 51064562 | 51064702 | 51064562 | ID=MS.gene47387.t1.exon9;Parent=MS.gene47387.t1 |
| chr1.4 | CDS | 51064562 | 51064702 | 51064562 | ID=cds.MS.gene47387.t1;Parent=MS.gene47387.t1 |
| Gene Sequence |
| Protein sequence |
