AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47423

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47423.t1 MTR_1g062740 98.417 821 9 1 1 817 1 821 0.0 1665
MS.gene47423.t1 MTR_8g088930 51.344 781 345 9 44 812 6 763 0.0 772
MS.gene47423.t1 MTR_8g088930 51.535 782 343 10 44 812 6 764 0.0 772
MS.gene47423.t1 MTR_8g088930 51.085 691 309 7 44 727 6 674 0.0 672
MS.gene47423.t1 MTR_8g088930 50.870 690 311 6 44 727 6 673 0.0 671
MS.gene47423.t1 MTR_1g050740 42.303 825 399 19 3 811 14 777 0.0 603
MS.gene47423.t1 MTR_8g039100 42.401 783 349 16 47 811 49 747 0.0 581
MS.gene47423.t1 MTR_7g089950 43.278 781 368 17 47 811 67 788 0.0 580
MS.gene47423.t1 MTR_7g089950 33.588 131 64 1 45 175 134 241 5.04e-15 79.7
MS.gene47423.t1 MTR_5g459450 42.261 743 319 16 97 811 69 729 4.27e-180 536
MS.gene47423.t1 MTR_5g459450 48.066 181 85 1 42 213 60 240 7.33e-52 194
MS.gene47423.t1 MTR_3g073100 40.048 834 350 17 8 814 21 731 3.33e-179 533
MS.gene47423.t1 MTR_3g097260 41.421 746 307 16 97 811 55 701 2.89e-168 504
MS.gene47423.t1 MTR_3g097260 49.714 175 88 0 47 221 51 225 7.30e-47 179
MS.gene47423.t1 MTR_8g095170 52.632 437 146 7 386 811 277 663 6.10e-144 439
MS.gene47423.t1 MTR_8g095170 47.337 169 88 1 44 211 23 191 2.08e-46 177
MS.gene47423.t1 MTR_8g095170 35.556 135 86 1 97 230 30 164 3.21e-16 83.6
MS.gene47423.t1 MTR_8g095170 35.644 101 65 0 132 232 43 143 6.48e-15 79.3
MS.gene47423.t1 MTR_3g014650 50.913 438 169 9 385 811 368 770 2.76e-131 410
MS.gene47423.t1 MTR_3g014650 44.503 191 94 1 47 237 85 263 1.61e-47 181
MS.gene47423.t1 MTR_3g014650 36.000 100 63 1 46 145 164 262 6.09e-11 66.6
MS.gene47423.t1 MTR_8g095170 63.910 266 93 2 386 649 277 541 6.77e-116 364
MS.gene47423.t1 MTR_8g095170 47.337 169 88 1 44 211 23 191 1.98e-46 176
MS.gene47423.t1 MTR_8g095170 35.556 135 86 1 97 230 30 164 6.13e-16 82.4
MS.gene47423.t1 MTR_8g095170 35.644 101 65 0 132 232 43 143 1.19e-14 78.2
MS.gene47423.t1 MTR_8g080860 40.323 186 111 0 45 230 14 199 5.37e-36 138
MS.gene47423.t1 MTR_8g080860 35.802 162 104 0 46 207 107 268 7.24e-24 102
MS.gene47423.t1 MTR_8g080860 40.323 186 111 0 45 230 10 195 9.91e-36 137
MS.gene47423.t1 MTR_8g080860 35.802 162 104 0 46 207 103 264 1.14e-23 102
MS.gene47423.t1 MTR_4g107460 40.000 180 107 1 53 231 11 190 5.37e-32 128
MS.gene47423.t1 MTR_4g107460 31.739 230 148 2 48 272 53 278 5.92e-28 116
MS.gene47423.t1 MTR_4g107460 30.909 165 91 1 46 187 74 238 1.86e-15 79.0
MS.gene47423.t1 MTR_2g078470 33.772 228 146 3 46 272 143 366 1.37e-28 119
MS.gene47423.t1 MTR_2g078470 33.953 215 139 2 44 257 3 215 4.87e-23 102
MS.gene47423.t1 MTR_2g078470 33.951 162 107 0 46 207 212 373 1.77e-19 91.7
MS.gene47423.t1 MTR_6g043150 32.340 235 146 2 46 279 74 296 3.86e-27 113
MS.gene47423.t1 MTR_6g043150 35.025 197 99 2 50 246 9 176 1.87e-25 108
MS.gene47423.t1 MTR_6g043150 34.239 184 121 0 46 229 143 326 5.55e-22 98.2
MS.gene47423.t1 MTR_8g080350 32.766 235 119 3 46 241 121 355 5.85e-27 114
MS.gene47423.t1 MTR_8g080350 28.070 171 122 1 73 242 102 272 5.99e-14 75.1
MS.gene47423.t1 MTR_8g080350 30.065 153 105 1 78 230 86 236 1.23e-12 70.9
MS.gene47423.t1 MTR_5g010840 33.906 233 120 4 48 256 109 331 7.72e-27 114
MS.gene47423.t1 MTR_5g010840 32.990 194 118 2 46 239 176 357 7.00e-24 105
MS.gene47423.t1 MTR_5g010840 36.893 103 65 0 48 150 262 364 9.28e-12 68.2
MS.gene47423.t1 MTR_8g092090 31.925 213 132 3 46 245 27 239 8.90e-26 107
MS.gene47423.t1 MTR_8g092090 31.330 233 134 3 47 279 5 211 1.51e-23 100
MS.gene47423.t1 MTR_8g080310 33.544 158 82 1 73 230 9 143 1.74e-25 103
MS.gene47423.t1 MTR_8g080310 31.967 122 83 0 52 173 34 155 1.29e-16 78.2
MS.gene47423.t1 MTR_8g080310 29.907 107 75 0 46 152 51 157 5.44e-13 67.8
MS.gene47423.t1 MTR_3g005910 61.111 72 28 0 513 584 1 72 1.78e-25 100
MS.gene47423.t1 MTR_8g095240 27.532 385 189 11 56 364 9 379 4.94e-25 109
MS.gene47423.t1 MTR_8g095240 32.212 208 128 3 26 220 92 299 1.47e-22 101
MS.gene47423.t1 MTR_8g095240 30.573 157 108 1 45 200 169 325 7.31e-13 72.0
MS.gene47423.t1 MTR_8g095240 34.426 122 80 0 101 222 8 129 2.45e-12 70.1
MS.gene47423.t1 MTR_8g080340 39.231 130 79 0 78 207 23 152 6.17e-22 94.0
MS.gene47423.t1 MTR_8g080340 42.991 107 61 0 124 230 23 129 1.10e-21 93.2
MS.gene47423.t1 MTR_8g080340 30.769 117 81 0 45 161 36 152 7.34e-11 62.0
MS.gene47423.t1 MTR_8g007500 33.721 172 91 1 56 227 225 373 7.31e-21 97.1
MS.gene47423.t1 MTR_8g007500 29.082 196 114 2 37 232 185 355 3.74e-19 91.7
MS.gene47423.t1 MTR_8g007500 34.074 135 89 0 46 180 238 372 9.58e-13 71.6
MS.gene47423.t1 MTR_8g007500 34.545 110 72 0 124 233 201 310 1.24e-12 71.2
MS.gene47423.t1 MTR_7g451440 32.258 186 123 1 52 234 193 378 9.88e-21 96.7
MS.gene47423.t1 MTR_7g451440 32.298 161 109 0 72 232 190 350 2.01e-20 95.5
MS.gene47423.t1 MTR_7g451440 33.871 124 59 1 133 233 182 305 4.53e-12 69.7
MS.gene47423.t1 MTR_4g099180 30.049 203 134 2 72 274 170 364 1.41e-20 95.9
MS.gene47423.t1 MTR_4g099180 31.818 176 120 0 52 227 173 348 8.66e-20 93.2
MS.gene47423.t1 MTR_4g099180 29.592 196 131 3 8 203 159 347 1.19e-17 86.7
MS.gene47423.t1 MTR_4g099180 33.133 166 86 3 68 233 145 285 1.31e-14 77.4
MS.gene47423.t1 MTR_3g072650 32.121 165 112 0 68 232 179 343 1.83e-20 95.5
MS.gene47423.t1 MTR_3g072650 30.636 173 120 0 52 224 186 358 2.27e-18 89.0
MS.gene47423.t1 MTR_3g072650 33.333 138 69 2 96 233 184 298 3.68e-14 75.9
MS.gene47423.t1 MTR_3g072650 29.730 148 81 1 56 180 213 360 6.55e-13 72.0
MS.gene47423.t1 MTR_3g072650 32.121 165 112 0 68 232 179 343 2.67e-20 94.4
MS.gene47423.t1 MTR_3g072650 30.636 173 120 0 52 224 186 358 3.48e-18 88.2
MS.gene47423.t1 MTR_3g072650 33.333 138 69 2 96 233 184 298 5.68e-14 75.1
MS.gene47423.t1 MTR_3g072650 29.730 148 81 1 56 180 213 360 8.19e-13 71.6
MS.gene47423.t1 MTR_5g058920 31.609 174 119 0 59 232 182 355 4.53e-20 94.4
MS.gene47423.t1 MTR_5g058920 32.948 173 116 0 52 224 198 370 1.00e-19 93.2
MS.gene47423.t1 MTR_5g058920 34.058 138 68 2 96 233 196 310 2.76e-15 79.7
MS.gene47423.t1 MTR_5g058920 34.848 132 86 0 49 180 241 372 1.46e-13 74.3
MS.gene47423.t1 MTR_4g099180 33.133 166 86 3 68 233 145 285 1.44e-15 79.0
MS.gene47423.t1 MTR_4g099180 31.452 124 85 0 61 184 159 282 3.74e-11 65.5
MS.gene47423.t1 MTR_4g099180 33.133 166 86 3 68 233 145 285 3.02e-15 78.2
MS.gene47423.t1 MTR_4g099180 31.452 124 85 0 61 184 159 282 6.75e-11 65.1
MS.gene47423.t1 MTR_3g023310 34.328 134 75 1 61 194 6 126 2.93e-13 69.3
MS.gene47423.t1 MTR_3g023310 36.449 107 58 1 134 230 10 116 1.13e-12 67.4
MS.gene47423.t1 MTR_1g112280 26.490 151 88 1 53 203 615 742 2.38e-12 71.2
MS.gene47423.t1 MTR_8g092410 31.387 137 89 3 83 214 140 276 2.01e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47423.t1 AT3G09920 73.129 815 203 6 6 814 8 812 0.0 1237
MS.gene47423.t1 AT3G09920 73.129 815 203 6 6 814 8 812 0.0 1237
MS.gene47423.t1 AT3G09920 73.129 815 203 6 6 814 8 812 0.0 1237
MS.gene47423.t1 AT3G09920 73.129 815 203 6 6 814 8 812 0.0 1237
MS.gene47423.t1 AT1G60890 50.576 781 356 8 44 812 4 766 0.0 766
MS.gene47423.t1 AT1G60890 50.578 779 355 8 46 812 18 778 0.0 764
MS.gene47423.t1 AT1G10900 49.744 780 351 11 43 812 3 751 0.0 748
MS.gene47423.t1 AT1G10900 49.744 780 351 11 43 812 3 751 0.0 748
MS.gene47423.t1 AT1G10900 49.744 780 351 11 43 812 3 751 0.0 748
MS.gene47423.t1 AT2G41210 43.451 794 347 15 38 811 57 768 0.0 624
MS.gene47423.t1 AT3G56960 43.056 792 348 17 46 814 67 778 0.0 613
MS.gene47423.t1 AT3G56960 43.056 792 348 17 46 814 67 778 0.0 613
MS.gene47423.t1 AT1G21980 42.703 740 332 14 97 811 76 748 0.0 541
MS.gene47423.t1 AT1G21980 48.295 176 91 0 47 222 72 247 8.06e-51 191
MS.gene47423.t1 AT1G21980 29.927 137 71 2 37 173 133 244 8.92e-13 72.8
MS.gene47423.t1 AT1G77740 43.221 745 322 16 97 811 77 750 1.19e-179 535
MS.gene47423.t1 AT1G77740 46.591 176 94 0 47 222 73 248 1.87e-51 193
MS.gene47423.t1 AT1G77740 36.905 84 53 0 46 129 164 247 2.60e-11 67.8
MS.gene47423.t1 AT1G77740 43.221 745 322 16 97 811 77 750 1.19e-179 535
MS.gene47423.t1 AT1G77740 46.591 176 94 0 47 222 73 248 1.87e-51 193
MS.gene47423.t1 AT1G77740 36.905 84 53 0 46 129 164 247 2.60e-11 67.8
MS.gene47423.t1 AT2G26420 38.564 822 373 12 7 811 9 715 7.40e-177 526
MS.gene47423.t1 AT2G26420 38.564 822 373 12 7 811 9 715 7.40e-177 526
MS.gene47423.t1 AT2G26420 38.808 822 357 14 7 811 9 701 4.63e-176 524
MS.gene47423.t1 AT3G07960 39.873 785 368 20 47 811 11 711 1.00e-174 521
MS.gene47423.t1 AT3G07960 34.483 174 68 1 46 173 22 195 5.61e-28 121
MS.gene47423.t1 AT3G07960 40.422 616 309 13 47 649 11 581 3.60e-143 436
MS.gene47423.t1 AT3G07960 34.483 174 68 1 46 173 22 195 1.00e-27 119
MS.gene47423.t1 AT3G07960 40.422 616 309 13 47 649 11 581 3.60e-143 436
MS.gene47423.t1 AT3G07960 34.483 174 68 1 46 173 22 195 1.00e-27 119
MS.gene47423.t1 AT3G07960 40.422 616 309 13 47 649 11 581 3.69e-143 436
MS.gene47423.t1 AT3G07960 34.483 174 68 1 46 173 22 195 7.53e-28 120
MS.gene47423.t1 AT4G01190 37.037 405 228 6 424 811 6 400 3.30e-83 272
MS.gene47423.t1 AT4G01190 37.037 405 228 6 424 811 6 400 3.30e-83 272
MS.gene47423.t1 AT4G01190 38.786 379 205 6 450 811 22 390 6.16e-83 271
MS.gene47423.t1 AT1G01460 37.619 420 226 7 424 811 4 419 3.40e-82 270
MS.gene47423.t1 AT1G77660 33.333 165 110 0 68 232 172 336 2.13e-21 98.2
MS.gene47423.t1 AT1G77660 31.429 175 120 0 50 224 177 351 7.41e-19 90.5
MS.gene47423.t1 AT1G77660 34.058 138 68 2 96 233 177 291 4.33e-15 79.0
MS.gene47423.t1 AT1G77660 28.378 148 83 1 56 180 206 353 5.21e-12 69.3
MS.gene47423.t1 AT4G17080 33.125 160 107 0 73 232 256 415 3.24e-21 98.6
MS.gene47423.t1 AT4G17080 32.759 174 117 0 52 225 258 431 3.57e-20 95.5
MS.gene47423.t1 AT4G17080 33.108 148 99 0 56 203 285 432 1.60e-19 93.6
MS.gene47423.t1 AT4G17080 34.532 139 68 2 95 233 255 370 7.45e-15 78.6
MS.gene47423.t1 AT4G17080 34.109 129 85 0 53 181 305 433 3.24e-13 73.6
MS.gene47423.t1 AT2G35170 33.548 155 103 0 78 232 230 384 5.89e-21 97.8
MS.gene47423.t1 AT2G35170 35.135 148 96 0 56 203 254 401 1.07e-20 96.7
MS.gene47423.t1 AT2G35170 32.353 170 115 0 56 225 231 400 8.22e-20 94.0
MS.gene47423.t1 AT2G35170 35.211 142 92 0 53 194 274 415 2.36e-15 80.1
MS.gene47423.t1 AT2G35170 34.586 133 64 2 101 233 230 339 1.00e-13 75.1
MS.gene47423.t1 AT1G21920 32.727 165 111 0 68 232 168 332 7.38e-21 96.7
MS.gene47423.t1 AT1G21920 35.135 148 96 0 56 203 202 349 5.91e-19 90.9
MS.gene47423.t1 AT1G21920 31.159 138 72 2 96 233 173 287 6.68e-13 72.0
MS.gene47423.t1 AT1G21920 32.727 165 111 0 68 232 168 332 1.45e-20 95.1
MS.gene47423.t1 AT1G21920 35.135 148 96 0 56 203 202 349 1.07e-18 89.4
MS.gene47423.t1 AT1G21920 31.159 138 72 2 96 233 173 287 1.87e-12 70.1
MS.gene47423.t1 AT1G75010 25.676 148 87 1 56 203 607 731 2.29e-12 71.2
MS.gene47423.t1 AT1G75010 31.496 127 87 0 99 225 604 730 3.82e-11 67.4
MS.gene47423.t1 AT1G71010 30.882 204 121 8 457 645 1378 1576 8.81e-11 66.6

Find 241 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGTAGGTCAGACTTTC+TGG 0.032461 1.4:-51567555 None:intergenic
CATTTGATGGGAACACTTTC+TGG 0.101303 1.4:-51574018 None:intergenic
GGCTAACGGAAATGTATATT+TGG 0.153313 1.4:+51567692 MS.gene47423:CDS
CATAGAAGATTTGATTTAAA+AGG 0.178433 1.4:+51571464 MS.gene47423:CDS
CATATATTCACGCTCCAAAA+TGG 0.193595 1.4:-51568240 None:intergenic
TAACGAAAAGATCCCCATTT+TGG 0.204980 1.4:+51568226 MS.gene47423:CDS
TAACACTGCTTCAGTTGATA+TGG 0.226428 1.4:+51568001 MS.gene47423:CDS
GAAGTTCGAGCATCGGATTT+TGG 0.230682 1.4:+51569451 MS.gene47423:CDS
CCGTTTGTCAATATAGATAT+AGG 0.267813 1.4:-51567270 None:intergenic
ATTCTACTCTCGTCGCTTCC+TGG 0.269786 1.4:+51573988 MS.gene47423:CDS
GGTATCTGCTCTGCCCTTGC+TGG 0.270097 1.4:-51573806 None:intergenic
CCCGGTGAACAAATTATTAA+AGG 0.280312 1.4:+51568365 MS.gene47423:CDS
TTTGAAGGAAGCTGGTTAAA+TGG 0.303077 1.4:+51567777 MS.gene47423:CDS
GTCAATTGAGAACCTTCTTT+AGG 0.304786 1.4:-51569502 None:intergenic
ATGGACTATAGTCTTCTTCT+AGG 0.307126 1.4:+51572054 MS.gene47423:CDS
TGAGACTGACAGCAAGTTCT+TGG 0.307848 1.4:+51572017 MS.gene47423:CDS
CTGGCATGTTCACACCTAAC+TGG 0.309968 1.4:-51573787 None:intergenic
CTTTATCCTGGCACATTTGA+TGG 0.312989 1.4:-51574031 None:intergenic
GATGGCAGACAGCTTCCTTT+TGG 0.316804 1.4:-51567897 None:intergenic
GAATACCACTCTTAAAGATT+TGG 0.317905 1.4:+51571529 MS.gene47423:CDS
CAGTTCCGCTTTGTTGTAAT+GGG 0.331322 1.4:+51571413 MS.gene47423:intron
TGAAAGGCGGTGGAGTTTAG+AGG 0.341412 1.4:+51568124 MS.gene47423:CDS
GAGATTGATCCAGATTTAAC+AGG 0.341541 1.4:-51568082 None:intergenic
GGGAAAATACAATGGCCTTC+TGG 0.345502 1.4:+51567471 MS.gene47423:CDS
CACAGAAAACCTGTTAAATC+TGG 0.351274 1.4:+51568073 MS.gene47423:CDS
CGGCAACGTTCCCGAGGGTC+AGG 0.351945 1.4:+51567380 MS.gene47423:CDS
CGCATATACTTGGGGTGATG+GGG 0.352244 1.4:+51567818 MS.gene47423:CDS
CTGGCCCCTCAGGATTTCCT+TGG 0.353999 1.4:-51567656 None:intergenic
ATTACTGCCCTATGGTGTTC+AGG 0.369775 1.4:+51569560 MS.gene47423:CDS
CAGGCAAAGGAACCCTTACC+TGG 0.372399 1.4:+51567739 MS.gene47423:CDS
TTAGTTTGCAGCTCGGAATA+AGG 0.372857 1.4:+51568411 MS.gene47423:CDS
CCTAATGGCGAGTCATATTC+CGG 0.375150 1.4:+51567348 MS.gene47423:CDS
GAATCGCCATCGACCTTTGT+AGG 0.376437 1.4:-51567568 None:intergenic
CACGGTACAGGATCATATAT+TGG 0.377388 1.4:+51567531 MS.gene47423:CDS
GGTCATTCCACTGAAATTGC+TGG 0.377930 1.4:+51567300 MS.gene47423:CDS
GCAGTTCCGCTTTGTTGTAA+TGG 0.378074 1.4:+51571412 MS.gene47423:intron
AGGGGCCAGGCAAGTATACC+TGG 0.381587 1.4:+51567670 MS.gene47423:CDS
ATGGTCTTGGCGCATATACT+TGG 0.382832 1.4:+51567808 MS.gene47423:CDS
GAGATATATTTGAAGGCTCT+TGG 0.382922 1.4:+51567631 MS.gene47423:CDS
GTTTGATTCGTTATCTATAT+CGG 0.383128 1.4:+51573952 MS.gene47423:CDS
GCCTTTAATAATTTGTTCAC+CGG 0.383988 1.4:-51568366 None:intergenic
TCGAACTTCTCGTCTCTGTA+TGG 0.387041 1.4:-51569437 None:intergenic
GCGCATATACTTGGGGTGAT+GGG 0.388619 1.4:+51567817 MS.gene47423:CDS
AAGGTCTTGTTCTGGTCCCT+CGG 0.390579 1.4:+51573009 MS.gene47423:CDS
CGAACTTCTCGTCTCTGTAT+GGG 0.392097 1.4:-51569436 None:intergenic
CGTGGCCACAGTTAGTAGTT+TGG 0.396056 1.4:+51567209 MS.gene47423:CDS
TTCACATGATGATGATAATC+TGG 0.397576 1.4:-51571090 None:intergenic
GTATACTTGCCTGGCCCCTC+AGG 0.398524 1.4:-51567666 None:intergenic
CCATCTGAACTTATACTAAC+AGG 0.402778 1.4:-51572111 None:intergenic
CTTTGTAGGTCAGACTTTCT+GGG 0.403996 1.4:-51567554 None:intergenic
ATATATTCACGCTCCAAAAT+GGG 0.411809 1.4:-51568239 None:intergenic
CCGGAATATGACTCGCCATT+AGG 0.412364 1.4:-51567348 None:intergenic
GGCGCATATACTTGGGGTGA+TGG 0.412463 1.4:+51567816 MS.gene47423:CDS
CAAAGCATCATTTCCACAAA+TGG 0.412721 1.4:-51570284 None:intergenic
CTCATCGATTTCTATCTTGT+CGG 0.415967 1.4:-51571507 None:intergenic
ATTCATCCAAAAGCTTGCTT+TGG 0.417999 1.4:-51569476 None:intergenic
TAACAGGAGGACGCAGCTGC+TGG 0.418233 1.4:-51572095 None:intergenic
TTGGTGCCAAAGCAAGCTTT+TGG 0.418662 1.4:+51569470 MS.gene47423:CDS
GCTAACGGAAATGTATATTT+GGG 0.418772 1.4:+51567693 MS.gene47423:CDS
GATTTAAAAGGTTCATCCCT+TGG 0.420681 1.4:+51571476 MS.gene47423:CDS
TCATATTCCGGATCCCTTCT+CGG 0.428398 1.4:+51567360 MS.gene47423:CDS
AGGTCTTGTTCTGGTCCCTC+GGG 0.429600 1.4:+51573010 MS.gene47423:CDS
CTATCCTCAAGGTCTTGTTC+TGG 0.430649 1.4:+51573001 MS.gene47423:CDS
TAGTATAAGTTCAGATGGTT+TGG 0.431889 1.4:+51572116 MS.gene47423:CDS
CCTTCAAATATATCTCCATT+TGG 0.434696 1.4:-51567624 None:intergenic
TTTGGTGAGACCCGGAGAAC+AGG 0.435312 1.4:+51568035 MS.gene47423:CDS
ACGGAACACCACCTGTTCTC+CGG 0.436364 1.4:-51568046 None:intergenic
GCATATACTTGGGGTGATGG+GGG 0.437543 1.4:+51567819 MS.gene47423:CDS
GGTTATCAAGTTTATCCAAA+TGG 0.441746 1.4:+51567609 MS.gene47423:CDS
GATATGGGAAATGCTAGATT+TGG 0.444711 1.4:+51568017 MS.gene47423:CDS
TTACTTGGAGCCGTCTTGGC+GGG 0.446907 1.4:+51571568 MS.gene47423:CDS
CGATTGCGAGCTTCAGCTGC+TGG 0.449991 1.4:+51573080 MS.gene47423:CDS
ATGAAAGGTGGGACAATGTC+AGG 0.450369 1.4:+51567720 MS.gene47423:CDS
AGCTGCTGGTGACGAGGAGG+TGG 0.451559 1.4:+51573094 MS.gene47423:CDS
CCAAATGGAGATATATTTGA+AGG 0.451632 1.4:+51567624 MS.gene47423:CDS
AGATTTGAGAAAACAGAATC+AGG 0.458804 1.4:+51567968 MS.gene47423:CDS
AACGTTGCCGAGAAGGGATC+CGG 0.460862 1.4:-51567367 None:intergenic
ATATGATGGTGAGTGGAGAC+GGG 0.461506 1.4:+51567431 MS.gene47423:CDS
CATATACTTGGGGTGATGGG+GGG 0.462159 1.4:+51567820 MS.gene47423:CDS
TATATGATGGTGAGTGGAGA+CGG 0.465323 1.4:+51567430 MS.gene47423:CDS
AGAACAGGTGGTGTTCCGTC+TGG 0.468196 1.4:+51568050 MS.gene47423:CDS
AAGATTACAACATGACTAAG+AGG 0.470669 1.4:+51573903 MS.gene47423:CDS
CGGAACACCACCTGTTCTCC+GGG 0.474120 1.4:-51568045 None:intergenic
CTATGTTGGGACATGGACAC+GGG 0.476652 1.4:+51567845 MS.gene47423:CDS
TGCAGACTTCAAATCCAGTT+AGG 0.478493 1.4:+51573773 MS.gene47423:intron
CGTTTGTCAATATAGATATA+GGG 0.484716 1.4:-51567269 None:intergenic
GCAAGGGCAGAGCAGATACC+AGG 0.484764 1.4:+51573809 MS.gene47423:CDS
TTGAGAGAACTATCGTCTCC+AGG 0.486817 1.4:+51570304 MS.gene47423:CDS
GCTATGTTGGGACATGGACA+CGG 0.491026 1.4:+51567844 MS.gene47423:CDS
CTTGGAGGAACAGCACATAA+TGG 0.491731 1.4:+51572035 MS.gene47423:CDS
ATATTGACAAACGGCGAAGC+TGG 0.492267 1.4:+51567279 MS.gene47423:CDS
CAAGGAAATCCTGAGGGGCC+AGG 0.493390 1.4:+51567657 MS.gene47423:CDS
CCTGTTAGTATAAGTTCAGA+TGG 0.493551 1.4:+51572111 MS.gene47423:CDS
AACACTGCTTCAGTTGATAT+GGG 0.495094 1.4:+51568002 MS.gene47423:CDS
AGGGTCAGGGTAAGTATGTA+TGG 0.497129 1.4:+51567394 MS.gene47423:CDS
GCAAGAATGTTTCTCTTGAA+AGG 0.498157 1.4:+51568108 MS.gene47423:CDS
ATGTTTCTCTTGAAAGGCGG+TGG 0.498163 1.4:+51568114 MS.gene47423:CDS
GTTAACCTCTTTATTTCCAT+CGG 0.499478 1.4:-51568207 None:intergenic
GTAGCTATTGAGAAAGTGAT+TGG 0.500108 1.4:+51568146 MS.gene47423:CDS
AACAGGAGGACGCAGCTGCT+GGG 0.500261 1.4:-51572094 None:intergenic
GGGGAACTCTCTCTTCCTAA+TGG 0.501996 1.4:+51567333 MS.gene47423:CDS
TTTGAAGGCTCTTGGATCCA+AGG 0.502212 1.4:+51567639 MS.gene47423:CDS
TATACCTTCAAGTGGCCAAA+AGG 0.503382 1.4:+51571161 MS.gene47423:CDS
ATCAGTCGGAGGATTTCAAA+TGG 0.505455 1.4:+51569533 MS.gene47423:CDS
AATGGTATGATGCATGGTCT+TGG 0.506505 1.4:+51567795 MS.gene47423:CDS
TTCGTTATCTATATCGGCGG+TGG 0.508660 1.4:+51573958 MS.gene47423:CDS
GAGACTCGTTTGAAGGAAGC+TGG 0.508961 1.4:+51567769 MS.gene47423:CDS
CTCGGGAACGTTGCCGAGAA+GGG 0.509049 1.4:-51567373 None:intergenic
AAGTTACTCAAACTTTATCC+TGG 0.509319 1.4:-51574043 None:intergenic
TTCAATCTTAAACATGGCCT+AGG 0.509691 1.4:+51567588 MS.gene47423:CDS
GTAAGTGGAGACTCGTTTGA+AGG 0.510136 1.4:+51567762 MS.gene47423:CDS
AGTCTCCACTTACCCAGGTA+AGG 0.510329 1.4:-51567752 None:intergenic
GTCCCTCGGGGAGCAGATGA+TGG 0.512041 1.4:+51573023 MS.gene47423:CDS
CCTCGGGAACGTTGCCGAGA+AGG 0.514362 1.4:-51567374 None:intergenic
TTGTATGAAGGTGAATTCTC+TGG 0.515684 1.4:+51567498 MS.gene47423:CDS
TTTATCCTGGCACATTTGAT+GGG 0.518514 1.4:-51574030 None:intergenic
TTTACTTGGAGCCGTCTTGG+CGG 0.518574 1.4:+51571567 MS.gene47423:CDS
AGATATACTTCTTGTGCAGA+TGG 0.519993 1.4:-51567915 None:intergenic
TAAACTAACCTGAACACCAT+AGG 0.523925 1.4:-51569568 None:intergenic
GGAACCCTTACCTGGGTAAG+TGG 0.524147 1.4:+51567747 MS.gene47423:CDS
AAGAATTACCTTGCAGTACC+AGG 0.524982 1.4:-51573128 None:intergenic
ACTGAGAAGATCAGAAGTAA+AGG 0.525732 1.4:+51570381 MS.gene47423:CDS
GGTGGCTATATCCACGGTAC+AGG 0.525855 1.4:+51567519 MS.gene47423:CDS
GAACTTCTCGTCTCTGTATG+GGG 0.526707 1.4:-51569435 None:intergenic
GACTGACAGCAAGTTCTTGG+AGG 0.527070 1.4:+51572020 MS.gene47423:CDS
TGATTCACAATTTGCCTCAA+CGG 0.528838 1.4:+51568172 MS.gene47423:CDS
ATGGAAAGATTACTGCCCTA+TGG 0.530066 1.4:+51569552 MS.gene47423:CDS
ACATACTTACCCTGACCCTC+GGG 0.531555 1.4:-51567390 None:intergenic
GATGATGGTAGTGTTGTTGT+CGG 0.532990 1.4:+51573038 MS.gene47423:CDS
TGGTCTTGGCGCATATACTT+GGG 0.533338 1.4:+51567809 MS.gene47423:CDS
TACATACTTACCCTGACCCT+CGG 0.534192 1.4:-51567391 None:intergenic
GACTACATGATGTCCATTTG+TGG 0.535966 1.4:+51570271 MS.gene47423:CDS
ATTTGGGAAATATGAAAGGT+GGG 0.536411 1.4:+51567709 MS.gene47423:CDS
GTGTTCCCATCAAATGTGCC+AGG 0.537171 1.4:+51574025 MS.gene47423:CDS
CCTTTAATAATTTGTTCACC+GGG 0.538422 1.4:-51568365 None:intergenic
AGAGCAGATACCAGGAAAAG+AGG 0.538731 1.4:+51573817 MS.gene47423:CDS
AAATTGCCAAAGATATCAAA+AGG 0.539194 1.4:+51568342 MS.gene47423:CDS
ACACTTTCTGGATAAAATCC+AGG 0.539376 1.4:-51574006 None:intergenic
CCTATATCTATATTGACAAA+CGG 0.539708 1.4:+51567270 MS.gene47423:CDS
TTATGACGTCGTACTATACC+TGG 0.539798 1.4:+51573862 MS.gene47423:CDS
TATTTGGGAAATATGAAAGG+TGG 0.542050 1.4:+51567708 MS.gene47423:CDS
GCCAAAGATATCAAAAGGCC+CGG 0.542683 1.4:+51568347 MS.gene47423:CDS
CTATCGTCTCCAGGGAAAAG+TGG 0.543810 1.4:+51570313 MS.gene47423:CDS
AGCTTCAGCTGCTGGTGACG+AGG 0.544007 1.4:+51573088 MS.gene47423:CDS
TTAGCCCAGGTATACTTGCC+TGG 0.547788 1.4:-51567675 None:intergenic
AAGCGACGAGAGTAGAATGT+AGG 0.549703 1.4:-51573983 None:intergenic
ACAGGAGGACGCAGCTGCTG+GGG 0.554405 1.4:-51572093 None:intergenic
GGTAAGTATGTATGGTCAGA+TGG 0.555310 1.4:+51567402 MS.gene47423:CDS
ACGGATTCAGTCTTCGCCGA+TGG 0.557719 1.4:+51568191 MS.gene47423:CDS
AACAAATTATTAAAGGCCAC+AGG 0.558304 1.4:+51568372 MS.gene47423:CDS
TCAGTGTCTTGATCATGAAA+CGG 0.559373 1.4:-51570363 None:intergenic
ATATGTTCTGCACAGAATTG+AGG 0.559541 1.4:+51571438 MS.gene47423:CDS
TTCTCTGGTGGCTATATCCA+CGG 0.561216 1.4:+51567513 MS.gene47423:CDS
TTGGCAATGCTTGCAGAGGA+AGG 0.564272 1.4:+51572135 MS.gene47423:CDS
CAGCAGCTGAAGCTCGCAAT+CGG 0.564387 1.4:-51573079 None:intergenic
AAACTAACCTGAACACCATA+GGG 0.565431 1.4:-51569567 None:intergenic
CCTTCTGGTGTGTTGTATGA+AGG 0.565486 1.4:+51567486 MS.gene47423:CDS
TTGGATAAACTTGATAACCT+AGG 0.565805 1.4:-51567605 None:intergenic
GTTGTCGGGTCACACATTAG+AGG 0.566169 1.4:+51573053 MS.gene47423:CDS
TCTTGTCGGAAGAACGTCCA+AGG 0.570830 1.4:-51571493 None:intergenic
ATATACATTTCCGTTAGCCC+AGG 0.571683 1.4:-51567688 None:intergenic
CCTTCTCGGCAACGTTCCCG+AGG 0.572618 1.4:+51567374 MS.gene47423:CDS
GTATATTTGGGAAATATGAA+AGG 0.572931 1.4:+51567705 MS.gene47423:CDS
TGGACACGGGGTCTTAAAGA+TGG 0.577970 1.4:+51567858 MS.gene47423:CDS
TTGGAGCGTGAATATATGCA+AGG 0.578663 1.4:+51568245 MS.gene47423:CDS
ATGCTAGATTTGGTGAGACC+CGG 0.578871 1.4:+51568027 MS.gene47423:CDS
GGCAAGTATACCTGGGCTAA+CGG 0.580636 1.4:+51567678 MS.gene47423:CDS
TATATACTTCATCCTCTAGA+GGG 0.582725 1.4:-51572977 None:intergenic
CTTCGCCGATGGAAATAAAG+AGG 0.582727 1.4:+51568202 MS.gene47423:CDS
CAAACTACTAACTGTGGCCA+CGG 0.585273 1.4:-51567208 None:intergenic
GGCAACGTTCCCGAGGGTCA+GGG 0.586924 1.4:+51567381 MS.gene47423:CDS
CACAGGATTATACCTTCAAG+TGG 0.587271 1.4:+51571153 MS.gene47423:CDS
ATGATGGTAGTGTTGTTGTC+GGG 0.587597 1.4:+51573039 MS.gene47423:CDS
CAAATCCAAATCTTTAAGAG+TGG 0.589290 1.4:-51571534 None:intergenic
TAGGTGTGAACATGCCAGCA+AGG 0.591715 1.4:+51573792 MS.gene47423:CDS
TTCTTCTACCTGGTACTGCA+AGG 0.594688 1.4:+51573120 MS.gene47423:CDS
GAGACGAGAAGTTCGAGCAT+CGG 0.594986 1.4:+51569444 MS.gene47423:CDS
CCTTCATACAACACACCAGA+AGG 0.602183 1.4:-51567486 None:intergenic
TTCAGCTGCTGGTGACGAGG+AGG 0.602690 1.4:+51573091 MS.gene47423:CDS
TGGATCCAAGGAAATCCTGA+GGG 0.606779 1.4:+51567651 MS.gene47423:CDS
TTATATACTTCATCCTCTAG+AGG 0.607130 1.4:-51572978 None:intergenic
TATATTCACGCTCCAAAATG+GGG 0.608393 1.4:-51568238 None:intergenic
AATAAAGACTCCCGCCAAGA+CGG 0.610613 1.4:-51571578 None:intergenic
ATTGACACCTCCTCATCAGT+CGG 0.612372 1.4:+51569519 MS.gene47423:CDS
TGGAGCGTGAATATATGCAA+GGG 0.612966 1.4:+51568246 MS.gene47423:CDS
TGAGAGAACTATCGTCTCCA+GGG 0.613070 1.4:+51570305 MS.gene47423:CDS
GCAATATATCAATGATACCC+AGG 0.613082 1.4:-51573880 None:intergenic
CCAGAAAGTCTGACCTACAA+AGG 0.613083 1.4:+51567555 MS.gene47423:CDS
GTCTGACCTACAAAGGTCGA+TGG 0.613814 1.4:+51567562 MS.gene47423:CDS
TATGATGGTGAGTGGAGACG+GGG 0.614874 1.4:+51567432 MS.gene47423:CDS
GTTGTGTATATGATGGTGAG+TGG 0.615250 1.4:+51567424 MS.gene47423:CDS
AGGTGTGAACATGCCAGCAA+GGG 0.616410 1.4:+51573793 MS.gene47423:CDS
CTGATGCTTAGTTTGCAGCT+CGG 0.616521 1.4:+51568404 MS.gene47423:CDS
TCAAATGGCTAGGTATACTG+TGG 0.619000 1.4:+51569402 MS.gene47423:intron
TTGAAATCCTCCGACTGATG+AGG 0.619768 1.4:-51569529 None:intergenic
GTCTCCACTTACCCAGGTAA+GGG 0.619943 1.4:-51567751 None:intergenic
GCAAGGGGTATTAATAAGTG+AGG 0.622233 1.4:+51568262 MS.gene47423:CDS
TGGTTTGGCAATGCTTGCAG+AGG 0.623080 1.4:+51572131 MS.gene47423:CDS
TACCATCATCTGCTCCCCGA+GGG 0.625035 1.4:-51573025 None:intergenic
GAAGTATATAACTATCCTCA+AGG 0.626789 1.4:+51572990 MS.gene47423:CDS
TGGCGATTCAATCTTAAACA+TGG 0.628373 1.4:+51567582 MS.gene47423:CDS
GGTCTTGGCGCATATACTTG+GGG 0.631149 1.4:+51567810 MS.gene47423:CDS
TCTAAAACCAGCAATTTCAG+TGG 0.631528 1.4:-51567307 None:intergenic
ATGGATTTGGGAAAATACAA+TGG 0.632638 1.4:+51567463 MS.gene47423:CDS
GGTGGGACAATGTCAGGCAA+AGG 0.633057 1.4:+51567726 MS.gene47423:CDS
CTTCTCGGCAACGTTCCCGA+GGG 0.634639 1.4:+51567375 MS.gene47423:CDS
AAATCCTCCGACTGATGAGG+AGG 0.634836 1.4:-51569526 None:intergenic
GAGGTGGATCTTCTTCTACC+TGG 0.635208 1.4:+51573110 MS.gene47423:CDS
AACTTCTCGTCTCTGTATGG+GGG 0.638602 1.4:-51569434 None:intergenic
AAACGAGTCTCCACTTACCC+AGG 0.643861 1.4:-51567757 None:intergenic
TATGAAGGTGAATTCTCTGG+TGG 0.644862 1.4:+51567501 MS.gene47423:CDS
ATGATGGTGAGTGGAGACGG+GGG 0.645871 1.4:+51567433 MS.gene47423:CDS
TTGGATCCAAGGAAATCCTG+AGG 0.646382 1.4:+51567650 MS.gene47423:CDS
ATTATGCATGTCTGGCTCCG+TGG 0.646691 1.4:+51567191 None:intergenic
GCATCAGATCATAACTCCTG+TGG 0.647690 1.4:-51568388 None:intergenic
CGGGGTCTTAAAGATGGCAA+AGG 0.648365 1.4:+51567864 MS.gene47423:CDS
GGTGAGACCCGGAGAACAGG+TGG 0.648651 1.4:+51568038 MS.gene47423:CDS
TGGTTAAATGGTATGATGCA+TGG 0.651397 1.4:+51567789 MS.gene47423:CDS
CAAATGGCTAGGTATACTGT+GGG 0.653802 1.4:+51569403 MS.gene47423:intron
CTTGTCGGAAGAACGTCCAA+GGG 0.656049 1.4:-51571492 None:intergenic
ATCAACTACAGACCCTCTAG+AGG 0.656438 1.4:+51572965 MS.gene47423:intron
AGAATGTTTCTCTTGAAAGG+CGG 0.656927 1.4:+51568111 MS.gene47423:CDS
GGTCTTGTTCTGGTCCCTCG+GGG 0.658058 1.4:+51573011 MS.gene47423:CDS
GGAGCGTGAATATATGCAAG+GGG 0.659260 1.4:+51568247 MS.gene47423:CDS
TCAGATGGTTGTGTATATGA+TGG 0.660600 1.4:+51567417 MS.gene47423:CDS
TATTTCCCATTACAACAAAG+CGG 0.665063 1.4:-51571418 None:intergenic
CTACCATCATCTGCTCCCCG+AGG 0.672666 1.4:-51573026 None:intergenic
TATGACGTCGTACTATACCT+GGG 0.673057 1.4:+51573863 MS.gene47423:CDS
GACACCTCCTCATCAGTCGG+AGG 0.674116 1.4:+51569522 MS.gene47423:CDS
GGCGAAGACTGAATCCGTTG+AGG 0.675390 1.4:-51568186 None:intergenic
AGGCAAAGGAACCCTTACCT+GGG 0.686161 1.4:+51567740 MS.gene47423:CDS
GTACGACGTCATAAGCCTCG+TGG 0.687876 1.4:-51573853 None:intergenic
TCGATCCAAACTACTAACTG+TGG 0.690124 1.4:-51567214 None:intergenic
TGATTCGTTATCTATATCGG+CGG 0.703435 1.4:+51573955 MS.gene47423:CDS
GGGGCCAGGCAAGTATACCT+GGG 0.703812 1.4:+51567671 MS.gene47423:CDS
TCTGAACTTATACTAACAGG+AGG 0.705844 1.4:-51572108 None:intergenic
TATGTTGGGACATGGACACG+GGG 0.713292 1.4:+51567846 MS.gene47423:CDS
GGGACCAGAACAAGACCTTG+AGG 0.724705 1.4:-51573005 None:intergenic
CAATATATGATCCTGTACCG+TGG 0.736323 1.4:-51567530 None:intergenic
GGATCCAAGGAAATCCTGAG+GGG 0.751805 1.4:+51567652 MS.gene47423:CDS
GGAAACTCAAATGTTCCACG+AGG 0.778032 1.4:+51573838 MS.gene47423:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAAAATAATTTTTTTGTT+TGG - chr1.4:51571353-51571372 None:intergenic 10.0%
!!! AATAAAATATTTTCTTACAA+TGG - chr1.4:51571648-51571667 None:intergenic 10.0%
!!! ATTATACTTTTTTTTTTCTT+CGG + chr1.4:51569045-51569064 MS.gene47423:intron 10.0%
!! AAAAAGAAATAAAGTAGATT+TGG + chr1.4:51570076-51570095 MS.gene47423:intron 15.0%
!! TATAATTGTAAAACTTTGAT+TGG - chr1.4:51572784-51572803 None:intergenic 15.0%
!! TTACAATTATATGATGATTA+TGG + chr1.4:51572793-51572812 MS.gene47423:intron 15.0%
!! TTATTAAATTTGTACATTTG+AGG + chr1.4:51571760-51571779 MS.gene47423:intron 15.0%
!!! ATCATTTTAGAAATTCTTAT+AGG + chr1.4:51572821-51572840 MS.gene47423:intron 15.0%
!!! TAAGAAAATATTTTATTCCT+AGG + chr1.4:51571651-51571670 MS.gene47423:intron 15.0%
!!! TAATTAACTTGAATTGTTAA+TGG - chr1.4:51568968-51568987 None:intergenic 15.0%
!!! TGAACATGTAAAATATTTTA+AGG + chr1.4:51571827-51571846 MS.gene47423:intron 15.0%
!! AAACTTGAAATTCAAACAAA+TGG - chr1.4:51571900-51571919 None:intergenic 20.0%
!! AAATAGTATTTGTTTGCTTA+AGG - chr1.4:51569186-51569205 None:intergenic 20.0%
!! AATAAATGTCAATCACATAA+AGG - chr1.4:51572201-51572220 None:intergenic 20.0%
!! ATATATAACAAGCATATGAA+AGG - chr1.4:51570197-51570216 None:intergenic 20.0%
!! ATATTCTAGCAACTATTTAA+TGG - chr1.4:51573716-51573735 None:intergenic 20.0%
!! GGAAAATTATAGAAACAATA+TGG - chr1.4:51569794-51569813 None:intergenic 20.0%
!! GTGGTTAAAAAACAAATATA+GGG - chr1.4:51568862-51568881 None:intergenic 20.0%
!! TAGAAGAAATTAAGTTATTC+TGG + chr1.4:51569326-51569345 MS.gene47423:intron 20.0%
!! TCTGTAAGTAACTTAAAAAT+GGG + chr1.4:51569377-51569396 MS.gene47423:intron 20.0%
!! TGGTTAAAAAACAAATATAG+GGG - chr1.4:51568861-51568880 None:intergenic 20.0%
!! TGTGGTTAAAAAACAAATAT+AGG - chr1.4:51568863-51568882 None:intergenic 20.0%
!! TTCTGTAAGTAACTTAAAAA+TGG + chr1.4:51569376-51569395 MS.gene47423:intron 20.0%
!! TTGTTATAGCACTATAATTA+TGG + chr1.4:51572915-51572934 MS.gene47423:intron 20.0%
!!! AATTTTCTATTCTAACTTCT+TGG - chr1.4:51570914-51570933 None:intergenic 20.0%
!!! ACTTAATTTCTTCTAAAGTT+TGG - chr1.4:51569321-51569340 None:intergenic 20.0%
!!! AGATTTTTTGAATTAACTTG+TGG + chr1.4:51570947-51570966 MS.gene47423:intron 20.0%
!!! AGGTTAGTTTAAACTTTTTT+AGG + chr1.4:51569580-51569599 MS.gene47423:intron 20.0%
!!! ATAAAATGCTTTTGTGAAAA+AGG - chr1.4:51572442-51572461 None:intergenic 20.0%
!!! ATTTTGGATTTGTTGTATAT+TGG + chr1.4:51572694-51572713 MS.gene47423:intron 20.0%
!!! CATAGAAGATTTGATTTAAA+AGG + chr1.4:51571464-51571483 MS.gene47423:CDS 20.0%
!!! CTTTTAAATCAAATCTTCTA+TGG - chr1.4:51571466-51571485 None:intergenic 20.0%
!!! CTTTTATGTTCATAAAATAC+AGG + chr1.4:51573259-51573278 MS.gene47423:intron 20.0%
!!! TAAGAATTTCTAAAATGATG+TGG - chr1.4:51572820-51572839 None:intergenic 20.0%
!!! TAGAATTGTTTTTGTATACA+TGG + chr1.4:51570118-51570137 MS.gene47423:intron 20.0%
!!! TTTTTTTCTTCTAACTGAAA+CGG + chr1.4:51572718-51572737 MS.gene47423:intron 20.0%
! AAAACATGTAGATTTCATGT+TGG + chr1.4:51569982-51570001 MS.gene47423:intron 25.0%
! AAATTGCCAAAGATATCAAA+AGG + chr1.4:51568342-51568361 MS.gene47423:CDS 25.0%
! AATATAATCCCAAGTGAAAT+AGG - chr1.4:51573664-51573683 None:intergenic 25.0%
! ACATGTACACATTTAAAAGT+AGG - chr1.4:51573505-51573524 None:intergenic 25.0%
! AGAAATGTGGTTATTGAAAA+TGG + chr1.4:51568887-51568906 MS.gene47423:intron 25.0%
! ATGTGATTGACATTTATTTC+TGG + chr1.4:51572203-51572222 MS.gene47423:intron 25.0%
! ATTCCATTTCATTTCCTATT+GGG + chr1.4:51569132-51569151 MS.gene47423:intron 25.0%
! CATGAAGATGTAATAATGAT+AGG - chr1.4:51571330-51571349 None:intergenic 25.0%
! CCTATATCTATATTGACAAA+CGG + chr1.4:51567270-51567289 MS.gene47423:CDS 25.0%
! CGTTTGTCAATATAGATATA+GGG - chr1.4:51567272-51567291 None:intergenic 25.0%
! GAAAGCTAATGTTTAGTAAT+TGG + chr1.4:51572175-51572194 MS.gene47423:intron 25.0%
! GAAATGTGGTTATTGAAAAT+GGG + chr1.4:51568888-51568907 MS.gene47423:intron 25.0%
! GATTGTTTATTAACATGAGA+TGG + chr1.4:51572479-51572498 MS.gene47423:intron 25.0%
! GTAATTCTTCATGAGTTTAA+TGG + chr1.4:51573142-51573161 MS.gene47423:intron 25.0%
! GTATATTTGGGAAATATGAA+AGG + chr1.4:51567705-51567724 MS.gene47423:CDS 25.0%
! TAAATTACTTTGTTGAAGGA+CGG - chr1.4:51571701-51571720 None:intergenic 25.0%
! TAAGGTAAAAGATACTATCT+TGG + chr1.4:51568429-51568448 MS.gene47423:intron 25.0%
! TAGACCAAATTATAGATAAC+CGG - chr1.4:51572852-51572871 None:intergenic 25.0%
! TATTCCATTTCATTTCCTAT+TGG + chr1.4:51569131-51569150 MS.gene47423:intron 25.0%
! TATTGATATACAAACTTCCT+TGG + chr1.4:51570453-51570472 MS.gene47423:intron 25.0%
! TTATCCGGTTATCTATAATT+TGG + chr1.4:51572845-51572864 MS.gene47423:intron 25.0%
! TTATGTTCATAAAATACAGG+CGG + chr1.4:51573262-51573281 MS.gene47423:intron 25.0%
! TTTCTAATATCAGAACACTA+AGG - chr1.4:51569815-51569834 None:intergenic 25.0%
!! ACTTGGGATTATATTGATTA+AGG + chr1.4:51573669-51573688 MS.gene47423:intron 25.0%
!! GATATAAACACTGCTTATTT+TGG + chr1.4:51572326-51572345 MS.gene47423:intron 25.0%
!! GATGTAAAAGAAAGATTTTC+TGG - chr1.4:51572395-51572414 None:intergenic 25.0%
!! GCTTTGAATATCAGTAATTA+TGG + chr1.4:51569006-51569025 MS.gene47423:intron 25.0%
!! GTTCTAAATTACTTTGTTGA+AGG - chr1.4:51571705-51571724 None:intergenic 25.0%
!! GTTTGATTCGTTATCTATAT+CGG + chr1.4:51573952-51573971 MS.gene47423:CDS 25.0%
!! TCTTATTATGTCTTGCATTT+TGG + chr1.4:51572678-51572697 MS.gene47423:intron 25.0%
!! TTCCATATTTCATTTTACCT+GGG + chr1.4:51570499-51570518 MS.gene47423:intron 25.0%
!! TTCTTATGGGAATTTTCATA+TGG + chr1.4:51568607-51568626 MS.gene47423:intron 25.0%
!! TTTTTCATATGTACATGATC+CGG + chr1.4:51570734-51570753 MS.gene47423:intron 25.0%
!!! AAATGGAATATCTTGCTTTT+TGG - chr1.4:51569121-51569140 None:intergenic 25.0%
!!! AAATGTTAGGAGCTATTTTT+AGG + chr1.4:51572535-51572554 MS.gene47423:intron 25.0%
!!! AATGGAATATCTTGCTTTTT+GGG - chr1.4:51569120-51569139 None:intergenic 25.0%
!!! CTGCTTATTTTGGTATTATT+AGG + chr1.4:51572336-51572355 MS.gene47423:intron 25.0%
!!! TATCAATATTTGCTTTTGCA+TGG + chr1.4:51569351-51569370 MS.gene47423:intron 25.0%
!!! TTGTTTTTGTATACATGGTA+AGG + chr1.4:51570123-51570142 MS.gene47423:intron 25.0%
!!! TTTGGTTCTTTCATTGTATA+TGG - chr1.4:51569294-51569313 None:intergenic 25.0%
!!! TTTTTTCTTCTAACTGAAAC+GGG + chr1.4:51572719-51572738 MS.gene47423:intron 25.0%
AAAACCTCAATCTCTTTAAG+AGG - chr1.4:51568740-51568759 None:intergenic 30.0%
AACAAATTATTAAAGGCCAC+AGG + chr1.4:51568372-51568391 MS.gene47423:CDS 30.0%
AACAATCTACCTATTTCACT+TGG + chr1.4:51573652-51573671 MS.gene47423:intron 30.0%
AACCAATCAGCATGTTTAAT+TGG - chr1.4:51572626-51572645 None:intergenic 30.0%
AAGATTACAACATGACTAAG+AGG + chr1.4:51573903-51573922 MS.gene47423:CDS 30.0%
AATACCTACTTGACAACTTA+AGG + chr1.4:51569901-51569920 MS.gene47423:intron 30.0%
AATCACTAAATTGTCACTCA+TGG + chr1.4:51568809-51568828 MS.gene47423:intron 30.0%
AATGACATACTTGCAAAAAG+GGG + chr1.4:51570548-51570567 MS.gene47423:intron 30.0%
AATTCAGTAGTTACTGTAAG+AGG - chr1.4:51569763-51569782 None:intergenic 30.0%
ACAATCTACCTATTTCACTT+GGG + chr1.4:51573653-51573672 MS.gene47423:intron 30.0%
ACCAACTGTAAAGAATAGAA+GGG + chr1.4:51568706-51568725 MS.gene47423:intron 30.0%
ACTATTTAATGGTGCACTAA+AGG - chr1.4:51573705-51573724 None:intergenic 30.0%
ACTTAAGGTGAATACAAGAA+TGG + chr1.4:51569916-51569935 MS.gene47423:intron 30.0%
AGAACCTACATTTCAGATTA+TGG - chr1.4:51571057-51571076 None:intergenic 30.0%
AGATTTGAGAAAACAGAATC+AGG + chr1.4:51567968-51567987 MS.gene47423:CDS 30.0%
ATATATTCACGCTCCAAAAT+GGG - chr1.4:51568242-51568261 None:intergenic 30.0%
ATCACTAAATTGTCACTCAT+GGG + chr1.4:51568810-51568829 MS.gene47423:intron 30.0%
ATGGATTTGGGAAAATACAA+TGG + chr1.4:51567463-51567482 MS.gene47423:CDS 30.0%
ATTCCCAATAGGAAATGAAA+TGG - chr1.4:51569138-51569157 None:intergenic 30.0%
ATTCCTGCTTGAAAAATGTT+AGG + chr1.4:51572522-51572541 MS.gene47423:intron 30.0%
ATTTGGGAAATATGAAAGGT+GGG + chr1.4:51567709-51567728 MS.gene47423:CDS 30.0%
CAAAGCAAAATATAGCTCAA+AGG - chr1.4:51568788-51568807 None:intergenic 30.0%
CAATGACATACTTGCAAAAA+GGG + chr1.4:51570547-51570566 MS.gene47423:intron 30.0%
CCAAATGGAGATATATTTGA+AGG + chr1.4:51567624-51567643 MS.gene47423:CDS 30.0%
CCGTTTGTCAATATAGATAT+AGG - chr1.4:51567273-51567292 None:intergenic 30.0%
CCTTCAAATATATCTCCATT+TGG - chr1.4:51567627-51567646 None:intergenic 30.0%
CGTAACTTATGTAAGAATGA+TGG - chr1.4:51570688-51570707 None:intergenic 30.0%
CTAAAGTTGGCATATATCAT+CGG + chr1.4:51572250-51572269 MS.gene47423:intron 30.0%
GAAATTCTTATAGGCTTATC+CGG + chr1.4:51572830-51572849 MS.gene47423:intron 30.0%
GAAGTATATAACTATCCTCA+AGG + chr1.4:51572990-51573009 MS.gene47423:CDS 30.0%
GAATACCACTCTTAAAGATT+TGG + chr1.4:51571529-51571548 MS.gene47423:CDS 30.0%
GAATATCATCCAAGTTAATG+AGG - chr1.4:51570843-51570862 None:intergenic 30.0%
GCTAACGGAAATGTATATTT+GGG + chr1.4:51567693-51567712 MS.gene47423:CDS 30.0%
GCTAGAATATAATAGACTGA+GGG + chr1.4:51573726-51573745 MS.gene47423:intron 30.0%
GCTATGATCACACTAATAAT+AGG - chr1.4:51573220-51573239 None:intergenic 30.0%
GGAGTCTTTATTAAAGTAAG+GGG + chr1.4:51571589-51571608 MS.gene47423:intron 30.0%
GGATTCAAGAAAAAAGAATG+TGG + chr1.4:51568831-51568850 MS.gene47423:intron 30.0%
GGGAGTCTTTATTAAAGTAA+GGG + chr1.4:51571588-51571607 MS.gene47423:intron 30.0%
GGTTATCAAGTTTATCCAAA+TGG + chr1.4:51567609-51567628 MS.gene47423:CDS 30.0%
TAAATATACGAGAGCTTGAA+CGG - chr1.4:51573437-51573456 None:intergenic 30.0%
TAACATGAGATGGATATGAA+TGG + chr1.4:51572489-51572508 MS.gene47423:intron 30.0%
TACCAACTGTAAAGAATAGA+AGG + chr1.4:51568705-51568724 MS.gene47423:intron 30.0%
TAGTATAAGTTCAGATGGTT+TGG + chr1.4:51572116-51572135 MS.gene47423:CDS 30.0%
TATATACTTCATCCTCTAGA+GGG - chr1.4:51572980-51572999 None:intergenic 30.0%
TATTTCCCATTACAACAAAG+CGG - chr1.4:51571421-51571440 None:intergenic 30.0%
TATTTGGGAAATATGAAAGG+TGG + chr1.4:51567708-51567727 MS.gene47423:CDS 30.0%
TCAATGACATACTTGCAAAA+AGG + chr1.4:51570546-51570565 MS.gene47423:intron 30.0%
TCAATGCATTGAGAAAAAGA+GGG + chr1.4:51567937-51567956 MS.gene47423:CDS 30.0%
TGATTTAGTAAAGCAAGGAT+TGG - chr1.4:51569667-51569686 None:intergenic 30.0%
TGCTAGAATATAATAGACTG+AGG + chr1.4:51573725-51573744 MS.gene47423:intron 30.0%
TGTAGTGATTTAGTAAAGCA+AGG - chr1.4:51569672-51569691 None:intergenic 30.0%
TGTTATAGTAGAACTAACAC+AGG + chr1.4:51569229-51569248 MS.gene47423:intron 30.0%
TTAACCACAGAAAAGAAATG+TGG + chr1.4:51568874-51568893 MS.gene47423:intron 30.0%
TTATATACTTCATCCTCTAG+AGG - chr1.4:51572981-51573000 None:intergenic 30.0%
TTATTCCTGTTAATGACATG+AGG + chr1.4:51569265-51569284 MS.gene47423:intron 30.0%
! AAAGGAACCTTTTATCCAAA+AGG + chr1.4:51567882-51567901 MS.gene47423:CDS 30.0%
! AAGTATGTCATTGATAACCA+AGG - chr1.4:51570540-51570559 None:intergenic 30.0%
! ACTTAAAAATGGGCTTCAAA+TGG + chr1.4:51569387-51569406 MS.gene47423:intron 30.0%
! AGGAGGTCATAATTTTCTTA+TGG + chr1.4:51568593-51568612 MS.gene47423:intron 30.0%
! ATAACCACATTTCTTTTCTG+TGG - chr1.4:51568881-51568900 None:intergenic 30.0%
! CAAATCCAAATCTTTAAGAG+TGG - chr1.4:51571537-51571556 None:intergenic 30.0%
! CTTAAAGAGATTGAGGTTTT+AGG + chr1.4:51568740-51568759 MS.gene47423:intron 30.0%
! GGAGGTCATAATTTTCTTAT+GGG + chr1.4:51568594-51568613 MS.gene47423:intron 30.0%
! GTAGGTATTGCAATTTGAAA+TGG - chr1.4:51569890-51569909 None:intergenic 30.0%
! GTTAACCTCTTTATTTCCAT+CGG - chr1.4:51568210-51568229 None:intergenic 30.0%
! GTTCCATATTTCATTTTACC+TGG + chr1.4:51570498-51570517 MS.gene47423:intron 30.0%
! TCAGACAGTTTTTATGTTCA+CGG + chr1.4:51568659-51568678 MS.gene47423:intron 30.0%
! TGATTCTGTTTTCTCAAATC+TGG - chr1.4:51567969-51567988 None:intergenic 30.0%
! TGCATTTAAGTTAATGAAGC+AGG - chr1.4:51570713-51570732 None:intergenic 30.0%
! TGGATGAATTTTCCTAAAGA+AGG + chr1.4:51569490-51569509 MS.gene47423:CDS 30.0%
! TTCACATGATGATGATAATC+TGG - chr1.4:51571093-51571112 None:intergenic 30.0%
! TTGGATAAACTTGATAACCT+AGG - chr1.4:51567608-51567627 None:intergenic 30.0%
! TTGTGTGTTTTACCTAAAGT+TGG + chr1.4:51572237-51572256 MS.gene47423:intron 30.0%
! TTTTGTGAAAAAGGTCAGAT+GGG - chr1.4:51572433-51572452 None:intergenic 30.0%
!! ATTCTTTACAGTTGGTAACA+AGG - chr1.4:51568702-51568721 None:intergenic 30.0%
!! CCTTTAATAATTTGTTCACC+GGG - chr1.4:51568368-51568387 None:intergenic 30.0%
!! CTTCTAAAGTTTGGTACATT+TGG - chr1.4:51569312-51569331 None:intergenic 30.0%
!! GCCTTTAATAATTTGTTCAC+CGG - chr1.4:51568369-51568388 None:intergenic 30.0%
!! TTTGAACTACTGCTTTTACT+TGG + chr1.4:51571553-51571572 MS.gene47423:CDS 30.0%
!!! AAATTGCTGGTTTTAGAGTA+GGG + chr1.4:51567313-51567332 MS.gene47423:CDS 30.0%
!!! ACACTCGTTACAAAGTTTTT+TGG + chr1.4:51571126-51571145 MS.gene47423:CDS 30.0%
!!! ATGGAATATCTTGCTTTTTG+GGG - chr1.4:51569119-51569138 None:intergenic 30.0%
!!! ATTTTTTTCATGCAGAAGTG+TGG - chr1.4:51573579-51573598 None:intergenic 30.0%
!!! GTAAAGGTGTGTTTATTTTG+TGG + chr1.4:51570397-51570416 MS.gene47423:intron 30.0%
AAACTAACCTGAACACCATA+GGG - chr1.4:51569570-51569589 None:intergenic 35.0%
AATGCCTCTTAAAGAGATTG+AGG + chr1.4:51568733-51568752 MS.gene47423:intron 35.0%
AATTTCTGCAAAAGGTCACA+AGG - chr1.4:51570222-51570241 None:intergenic 35.0%
ACACTTTCTGGATAAAATCC+AGG - chr1.4:51574009-51574028 None:intergenic 35.0%
ACTGAGAAGATCAGAAGTAA+AGG + chr1.4:51570381-51570400 MS.gene47423:CDS 35.0%
AGAATGTTTCTCTTGAAAGG+CGG + chr1.4:51568111-51568130 MS.gene47423:CDS 35.0%
AGAGTAGTTTATGTTCTGCT+AGG + chr1.4:51573323-51573342 MS.gene47423:intron 35.0%
AGATATACTTCTTGTGCAGA+TGG - chr1.4:51567918-51567937 None:intergenic 35.0%
AGGACCAATGTTGTAAAATC+TGG + chr1.4:51572555-51572574 MS.gene47423:intron 35.0%
ATATGTTCTGCACAGAATTG+AGG + chr1.4:51571438-51571457 MS.gene47423:CDS 35.0%
ATGTTTAATTGGACCAGCAA+AGG - chr1.4:51572615-51572634 None:intergenic 35.0%
ATTATGACCTCCTTCTAACA+TGG - chr1.4:51568586-51568605 None:intergenic 35.0%
CAAGATGAATCCATGTTAGA+AGG + chr1.4:51568573-51568592 MS.gene47423:intron 35.0%
CACACTAATAATAGGATAGC+TGG - chr1.4:51573212-51573231 None:intergenic 35.0%
CACAGAAAACCTGTTAAATC+TGG + chr1.4:51568073-51568092 MS.gene47423:CDS 35.0%
CACATCACATCATACATTAG+AGG - chr1.4:51570032-51570051 None:intergenic 35.0%
CACCCAGGTAAAATGAAATA+TGG - chr1.4:51570504-51570523 None:intergenic 35.0%
CATATATTCACGCTCCAAAA+TGG - chr1.4:51568243-51568262 None:intergenic 35.0%
CCATCTGAACTTATACTAAC+AGG - chr1.4:51572114-51572133 None:intergenic 35.0%
CCCGGTGAACAAATTATTAA+AGG + chr1.4:51568365-51568384 MS.gene47423:CDS 35.0%
CCTGTTAGTATAAGTTCAGA+TGG + chr1.4:51572111-51572130 MS.gene47423:CDS 35.0%
CGATGATATATGCCAACTTT+AGG - chr1.4:51572252-51572271 None:intergenic 35.0%
CGGGAGTCTTTATTAAAGTA+AGG + chr1.4:51571587-51571606 MS.gene47423:intron 35.0%
CTCAATGCATTGAGAAAAAG+AGG + chr1.4:51567936-51567955 MS.gene47423:CDS 35.0%
CTCTCTCAAATTTCTGCAAA+AGG - chr1.4:51570230-51570249 None:intergenic 35.0%
GAGATATATTTGAAGGCTCT+TGG + chr1.4:51567631-51567650 MS.gene47423:CDS 35.0%
GAGATTGATCCAGATTTAAC+AGG - chr1.4:51568085-51568104 None:intergenic 35.0%
GAGCTCTTGAATTGAGTATT+CGG + chr1.4:51572747-51572766 MS.gene47423:intron 35.0%
GAGTAGTTTATGTTCTGCTA+GGG + chr1.4:51573324-51573343 MS.gene47423:intron 35.0%
GATATGGGAAATGCTAGATT+TGG + chr1.4:51568017-51568036 MS.gene47423:CDS 35.0%
GCAAGAATGTTTCTCTTGAA+AGG + chr1.4:51568108-51568127 MS.gene47423:CDS 35.0%
GCAATATATCAATGATACCC+AGG - chr1.4:51573883-51573902 None:intergenic 35.0%
GGCTAACGGAAATGTATATT+TGG + chr1.4:51567692-51567711 MS.gene47423:CDS 35.0%
GTAGCTATTGAGAAAGTGAT+TGG + chr1.4:51568146-51568165 MS.gene47423:CDS 35.0%
GTCAATTGAGAACCTTCTTT+AGG - chr1.4:51569505-51569524 None:intergenic 35.0%
GTCCAATTAAACATGCTGAT+TGG + chr1.4:51572621-51572640 MS.gene47423:intron 35.0%
TAAACTAACCTGAACACCAT+AGG - chr1.4:51569571-51569590 None:intergenic 35.0%
TATATTCACGCTCCAAAATG+GGG - chr1.4:51568241-51568260 None:intergenic 35.0%
TATTGTCTGCCTCATTAACT+TGG + chr1.4:51570831-51570850 MS.gene47423:intron 35.0%
TCAGATGGTTGTGTATATGA+TGG + chr1.4:51567417-51567436 MS.gene47423:CDS 35.0%
TCAGTGTCTTGATCATGAAA+CGG - chr1.4:51570366-51570385 None:intergenic 35.0%
TCCCTTCTATTCTTTACAGT+TGG - chr1.4:51568710-51568729 None:intergenic 35.0%
TCTGAACTTATACTAACAGG+AGG - chr1.4:51572111-51572130 None:intergenic 35.0%
TCTTGAATTGAGTATTCGGT+TGG + chr1.4:51572751-51572770 MS.gene47423:intron 35.0%
TGATATACAAACTTCCTTGG+AGG + chr1.4:51570456-51570475 MS.gene47423:intron 35.0%
TGATTCACAATTTGCCTCAA+CGG + chr1.4:51568172-51568191 MS.gene47423:CDS 35.0%
TGATTCGTTATCTATATCGG+CGG + chr1.4:51573955-51573974 MS.gene47423:CDS 35.0%
TGGCGATTCAATCTTAAACA+TGG + chr1.4:51567582-51567601 MS.gene47423:CDS 35.0%
TGGTTAAATGGTATGATGCA+TGG + chr1.4:51567789-51567808 MS.gene47423:CDS 35.0%
TTAGATGATGAGATCTACGA+GGG + chr1.4:51572363-51572382 MS.gene47423:intron 35.0%
TTCAATCTTAAACATGGCCT+AGG + chr1.4:51567588-51567607 MS.gene47423:CDS 35.0%
TTGTATGAAGGTGAATTCTC+TGG + chr1.4:51567498-51567517 MS.gene47423:CDS 35.0%
TTTAGATGATGAGATCTACG+AGG + chr1.4:51572362-51572381 MS.gene47423:intron 35.0%
TTTGAAGGAAGCTGGTTAAA+TGG + chr1.4:51567777-51567796 MS.gene47423:CDS 35.0%
! AACACTGCTTCAGTTGATAT+GGG + chr1.4:51568002-51568021 MS.gene47423:CDS 35.0%
! ACAGCTTCCTTTTGGATAAA+AGG - chr1.4:51567892-51567911 None:intergenic 35.0%
! ACAGTGCTGCTAAGTTAAAA+GGG - chr1.4:51572659-51572678 None:intergenic 35.0%
! ATGGACTATAGTCTTCTTCT+AGG + chr1.4:51572054-51572073 MS.gene47423:CDS 35.0%
! ATTCATCCAAAAGCTTGCTT+TGG - chr1.4:51569479-51569498 None:intergenic 35.0%
! CAAAGCATCATTTCCACAAA+TGG - chr1.4:51570287-51570306 None:intergenic 35.0%
! CTTTTGTGAAAAAGGTCAGA+TGG - chr1.4:51572434-51572453 None:intergenic 35.0%
! GATAAACGAGCATTACCTTT+TGG - chr1.4:51571179-51571198 None:intergenic 35.0%
! GTGACCATAATCTGAAATGT+AGG + chr1.4:51571050-51571069 MS.gene47423:intron 35.0%
! TAACACTGCTTCAGTTGATA+TGG + chr1.4:51568001-51568020 MS.gene47423:CDS 35.0%
! TAACGAAAAGATCCCCATTT+TGG + chr1.4:51568226-51568245 MS.gene47423:CDS 35.0%
! TAGTGTCTTTTTCTTGTCTC+AGG + chr1.4:51570336-51570355 MS.gene47423:CDS 35.0%
! TCTAAAACCAGCAATTTCAG+TGG - chr1.4:51567310-51567329 None:intergenic 35.0%
! TTCACCTTAAGTTGTCAAGT+AGG - chr1.4:51569908-51569927 None:intergenic 35.0%
! TTTTATTCCTAGGAACACAG+AGG + chr1.4:51571661-51571680 MS.gene47423:intron 35.0%
!! ATTTGAGTTTCCTCTTTTCC+TGG - chr1.4:51573830-51573849 None:intergenic 35.0%
!! CTCATCGATTTCTATCTTGT+CGG - chr1.4:51571510-51571529 None:intergenic 35.0%
!!! AATTGCTGGTTTTAGAGTAG+GGG + chr1.4:51567314-51567333 MS.gene47423:CDS 35.0%
!!! CAAAGTTTTTTGGTTTGCAC+AGG + chr1.4:51571136-51571155 MS.gene47423:CDS 35.0%
!!! GAAATTGCTGGTTTTAGAGT+AGG + chr1.4:51567312-51567331 MS.gene47423:CDS 35.0%
!!! TGGAATATCTTGCTTTTTGG+GGG - chr1.4:51569118-51569137 None:intergenic 35.0%
AAGAATTACCTTGCAGTACC+AGG - chr1.4:51573131-51573150 None:intergenic 40.0%
AATAGACGAGAGCAAAACAG+AGG - chr1.4:51570163-51570182 None:intergenic 40.0%
AATGGTATGATGCATGGTCT+TGG + chr1.4:51567795-51567814 MS.gene47423:CDS 40.0%
ACACACACACACATATCAAG+AGG + chr1.4:51570773-51570792 MS.gene47423:intron 40.0%
AGGTCTTTGCAGACAGAAAT+AGG + chr1.4:51570793-51570812 MS.gene47423:intron 40.0%
ATATACATTTCCGTTAGCCC+AGG - chr1.4:51567691-51567710 None:intergenic 40.0%
ATCACTACATGCCACTCTTA+TGG + chr1.4:51569683-51569702 MS.gene47423:intron 40.0%
ATCAGTCGGAGGATTTCAAA+TGG + chr1.4:51569533-51569552 MS.gene47423:CDS 40.0%
ATGGAAAGATTACTGCCCTA+TGG + chr1.4:51569552-51569571 MS.gene47423:CDS 40.0%
ATTGGGAATCACATAGCAAC+CGG + chr1.4:51569149-51569168 MS.gene47423:intron 40.0%
CAAATGGCTAGGTATACTGT+GGG + chr1.4:51569403-51569422 MS.gene47423:intron 40.0%
CAACTAGTGTTAGGAGTTAG+AGG - chr1.4:51573478-51573497 None:intergenic 40.0%
CAATATATGATCCTGTACCG+TGG - chr1.4:51567533-51567552 None:intergenic 40.0%
CAATGTTGTAAAATCTGGCC+TGG + chr1.4:51572560-51572579 MS.gene47423:intron 40.0%
CACAGGATTATACCTTCAAG+TGG + chr1.4:51571153-51571172 MS.gene47423:CDS 40.0%
CACGGTACAGGATCATATAT+TGG + chr1.4:51567531-51567550 MS.gene47423:CDS 40.0%
CATTTGATGGGAACACTTTC+TGG - chr1.4:51574021-51574040 None:intergenic 40.0%
CTTTGTAGGTCAGACTTTCT+GGG - chr1.4:51567557-51567576 None:intergenic 40.0%
GACTACATGATGTCCATTTG+TGG + chr1.4:51570271-51570290 MS.gene47423:CDS 40.0%
GATGAATCCATGTTAGAAGG+AGG + chr1.4:51568576-51568595 MS.gene47423:intron 40.0%
GCTTGAACGGCAAAAATCTA+TGG - chr1.4:51573424-51573443 None:intergenic 40.0%
GGTAAGTATGTATGGTCAGA+TGG + chr1.4:51567402-51567421 MS.gene47423:CDS 40.0%
GTTGCTATGTGATTCCCAAT+AGG - chr1.4:51569149-51569168 None:intergenic 40.0%
TAAACTACTCTCCCAACAAC+TGG - chr1.4:51573314-51573333 None:intergenic 40.0%
TACATGCCACTCTTATGGAT+TGG + chr1.4:51569688-51569707 MS.gene47423:intron 40.0%
TAGATGATGAGATCTACGAG+GGG + chr1.4:51572364-51572383 MS.gene47423:intron 40.0%
TATACCTTCAAGTGGCCAAA+AGG + chr1.4:51571161-51571180 MS.gene47423:CDS 40.0%
TATGAAGGTGAATTCTCTGG+TGG + chr1.4:51567501-51567520 MS.gene47423:CDS 40.0%
TATGACGTCGTACTATACCT+GGG + chr1.4:51573863-51573882 MS.gene47423:CDS 40.0%
TCAAATGGCTAGGTATACTG+TGG + chr1.4:51569402-51569421 MS.gene47423:intron 40.0%
TCGATCCAAACTACTAACTG+TGG - chr1.4:51567217-51567236 None:intergenic 40.0%
TGAACGGCAAAAATCTATGG+AGG - chr1.4:51573421-51573440 None:intergenic 40.0%
TGCAGACTTCAAATCCAGTT+AGG + chr1.4:51573773-51573792 MS.gene47423:intron 40.0%
TGGAGCGTGAATATATGCAA+GGG + chr1.4:51568246-51568265 MS.gene47423:CDS 40.0%
TGTCAACCAATCCATAAGAG+TGG - chr1.4:51569697-51569716 None:intergenic 40.0%
TTATGACGTCGTACTATACC+TGG + chr1.4:51573862-51573881 MS.gene47423:CDS 40.0%
TTGGAGCGTGAATATATGCA+AGG + chr1.4:51568245-51568264 MS.gene47423:CDS 40.0%
! AAAATGGGCTTCAAATGGCT+AGG + chr1.4:51569392-51569411 MS.gene47423:intron 40.0%
! ATGATGGTAGTGTTGTTGTC+GGG + chr1.4:51573039-51573058 MS.gene47423:CDS 40.0%
! ATTACCTTTTGGCCACTTGA+AGG - chr1.4:51571168-51571187 None:intergenic 40.0%
! CAGGCCAGATTTTACAACAT+TGG - chr1.4:51572562-51572581 None:intergenic 40.0%
! CAGTTCCGCTTTGTTGTAAT+GGG + chr1.4:51571413-51571432 MS.gene47423:intron 40.0%
! GACAGTGCTGCTAAGTTAAA+AGG - chr1.4:51572660-51572679 None:intergenic 40.0%
! GATGATGGTAGTGTTGTTGT+CGG + chr1.4:51573038-51573057 MS.gene47423:CDS 40.0%
! GTTGTGTATATGATGGTGAG+TGG + chr1.4:51567424-51567443 MS.gene47423:CDS 40.0%
! TATATGATGGTGAGTGGAGA+CGG + chr1.4:51567430-51567449 MS.gene47423:CDS 40.0%
! TCATTGATAACCAAGGACCA+TGG - chr1.4:51570533-51570552 None:intergenic 40.0%
! TGCACAAGAGTACGAGTAAA+AGG - chr1.4:51571990-51572009 None:intergenic 40.0%
! TTTTACTCGTACTCTTGTGC+AGG + chr1.4:51571989-51572008 MS.gene47423:intron 40.0%
!! GCAAGGGGTATTAATAAGTG+AGG + chr1.4:51568262-51568281 MS.gene47423:CDS 40.0%
!! TTAGTTTGCAGCTCGGAATA+AGG + chr1.4:51568411-51568430 MS.gene47423:CDS 40.0%
!!! GCTCCTAACATTTTTCAAGC+AGG - chr1.4:51572528-51572547 None:intergenic 40.0%
!!! GTTTTGAAGTTGAGCATTGC+AGG - chr1.4:51571957-51571976 None:intergenic 40.0%
!!! TCTTGCTTTTTGGGGGAAAA+AGG - chr1.4:51569111-51569130 None:intergenic 40.0%
AACTTCTCGTCTCTGTATGG+GGG - chr1.4:51569437-51569456 None:intergenic 45.0%
AAGCGACGAGAGTAGAATGT+AGG - chr1.4:51573986-51574005 None:intergenic 45.0%
AATAAAGACTCCCGCCAAGA+CGG - chr1.4:51571581-51571600 None:intergenic 45.0%
AGAGCAGATACCAGGAAAAG+AGG + chr1.4:51573817-51573836 MS.gene47423:CDS 45.0%
AGATGATGAGATCTACGAGG+GGG + chr1.4:51572365-51572384 MS.gene47423:intron 45.0%
AGGGTCAGGGTAAGTATGTA+TGG + chr1.4:51567394-51567413 MS.gene47423:CDS 45.0%
ATATTGACAAACGGCGAAGC+TGG + chr1.4:51567279-51567298 MS.gene47423:CDS 45.0%
ATCAACTACAGACCCTCTAG+AGG + chr1.4:51572965-51572984 MS.gene47423:intron 45.0%
ATGAAAGGTGGGACAATGTC+AGG + chr1.4:51567720-51567739 MS.gene47423:CDS 45.0%
ATGTTTCTCTTGAAAGGCGG+TGG + chr1.4:51568114-51568133 MS.gene47423:CDS 45.0%
ATTACTGCCCTATGGTGTTC+AGG + chr1.4:51569560-51569579 MS.gene47423:CDS 45.0%
ATTGACACCTCCTCATCAGT+CGG + chr1.4:51569519-51569538 MS.gene47423:CDS 45.0%
CAAACTACTAACTGTGGCCA+CGG - chr1.4:51567211-51567230 None:intergenic 45.0%
CAGTTGAAAACAAGCCTCCA+AGG - chr1.4:51570473-51570492 None:intergenic 45.0%
CCAGAAAGTCTGACCTACAA+AGG + chr1.4:51567555-51567574 MS.gene47423:CDS 45.0%
CCTAATGGCGAGTCATATTC+CGG + chr1.4:51567348-51567367 MS.gene47423:CDS 45.0%
CCTTCATACAACACACCAGA+AGG - chr1.4:51567489-51567508 None:intergenic 45.0%
CCTTCTGGTGTGTTGTATGA+AGG + chr1.4:51567486-51567505 MS.gene47423:CDS 45.0%
CCTTTGTAGGTCAGACTTTC+TGG - chr1.4:51567558-51567577 None:intergenic 45.0%
CGAACTTCTCGTCTCTGTAT+GGG - chr1.4:51569439-51569458 None:intergenic 45.0%
CTTCGCCGATGGAAATAAAG+AGG + chr1.4:51568202-51568221 MS.gene47423:CDS 45.0%
CTTGGAGGAACAGCACATAA+TGG + chr1.4:51572035-51572054 MS.gene47423:CDS 45.0%
GAACTTCTCGTCTCTGTATG+GGG - chr1.4:51569438-51569457 None:intergenic 45.0%
GCATCAGATCATAACTCCTG+TGG - chr1.4:51568391-51568410 None:intergenic 45.0%
GCCAAAGATATCAAAAGGCC+CGG + chr1.4:51568347-51568366 MS.gene47423:CDS 45.0%
GGAAACTCAAATGTTCCACG+AGG + chr1.4:51573838-51573857 MS.gene47423:CDS 45.0%
GGAGCGTGAATATATGCAAG+GGG + chr1.4:51568247-51568266 MS.gene47423:CDS 45.0%
GGGAAAATACAATGGCCTTC+TGG + chr1.4:51567471-51567490 MS.gene47423:CDS 45.0%
GGTCATTCCACTGAAATTGC+TGG + chr1.4:51567300-51567319 MS.gene47423:CDS 45.0%
GGTGCAATACTCCAGTTGTT+GGG + chr1.4:51573300-51573319 MS.gene47423:intron 45.0%
GGTTGCCTCATGTCATTAAC+AGG - chr1.4:51569273-51569292 None:intergenic 45.0%
GTAAGTGGAGACTCGTTTGA+AGG + chr1.4:51567762-51567781 MS.gene47423:CDS 45.0%
GTGTTAGGAGTTAGAGGATG+TGG - chr1.4:51573472-51573491 None:intergenic 45.0%
TACATACTTACCCTGACCCT+CGG - chr1.4:51567394-51567413 None:intergenic 45.0%
TCATATTCCGGATCCCTTCT+CGG + chr1.4:51567360-51567379 MS.gene47423:CDS 45.0%
TCGAACTTCTCGTCTCTGTA+TGG - chr1.4:51569440-51569459 None:intergenic 45.0%
TCTTTCTCCTCTGTGTTCCT+AGG - chr1.4:51571671-51571690 None:intergenic 45.0%
TGAGACTGACAGCAAGTTCT+TGG + chr1.4:51572017-51572036 MS.gene47423:CDS 45.0%
TGAGAGAACTATCGTCTCCA+GGG + chr1.4:51570305-51570324 MS.gene47423:CDS 45.0%
TGGATCCAAGGAAATCCTGA+GGG + chr1.4:51567651-51567670 MS.gene47423:CDS 45.0%
TGGTGCAATACTCCAGTTGT+TGG + chr1.4:51573299-51573318 MS.gene47423:intron 45.0%
TGTAAAATCTGGCCTGGACT+TGG + chr1.4:51572566-51572585 MS.gene47423:intron 45.0%
TGTGTGTGTGTAGGTACATC+CGG - chr1.4:51570756-51570775 None:intergenic 45.0%
TTCGTTATCTATATCGGCGG+TGG + chr1.4:51573958-51573977 MS.gene47423:CDS 45.0%
TTCTCTGGTGGCTATATCCA+CGG + chr1.4:51567513-51567532 MS.gene47423:CDS 45.0%
TTCTTCTACCTGGTACTGCA+AGG + chr1.4:51573120-51573139 MS.gene47423:CDS 45.0%
TTGAAATCCTCCGACTGATG+AGG - chr1.4:51569532-51569551 None:intergenic 45.0%
TTGAGAGAACTATCGTCTCC+AGG + chr1.4:51570304-51570323 MS.gene47423:CDS 45.0%
TTGGATCCAAGGAAATCCTG+AGG + chr1.4:51567650-51567669 MS.gene47423:CDS 45.0%
TTTGAAGGCTCTTGGATCCA+AGG + chr1.4:51567639-51567658 MS.gene47423:CDS 45.0%
! AAAATACAGGCGGCTGTTTC+TGG + chr1.4:51573272-51573291 MS.gene47423:intron 45.0%
! AAAGGACCTGGCTATCCTTT+TGG - chr1.4:51572597-51572616 None:intergenic 45.0%
! AACAGGTTTTCTGTGCCAGA+CGG - chr1.4:51568068-51568087 None:intergenic 45.0%
! ACCGGGCCTTTTGATATCTT+TGG - chr1.4:51568351-51568370 None:intergenic 45.0%
! ATATGATGGTGAGTGGAGAC+GGG + chr1.4:51567431-51567450 MS.gene47423:CDS 45.0%
! ATGGTCTTGGCGCATATACT+TGG + chr1.4:51567808-51567827 MS.gene47423:CDS 45.0%
! CAGAAGTGTGGTGCAATCAT+TGG - chr1.4:51573567-51573586 None:intergenic 45.0%
! GCAGTTCCGCTTTGTTGTAA+TGG + chr1.4:51571412-51571431 MS.gene47423:intron 45.0%
! GTAGGAGTGCAACTAGTGTT+AGG - chr1.4:51573487-51573506 None:intergenic 45.0%
! TGGTCTTGGCGCATATACTT+GGG + chr1.4:51567809-51567828 MS.gene47423:CDS 45.0%
! TTACCTGGGTGTTTTCTCCA+TGG + chr1.4:51570513-51570532 MS.gene47423:intron 45.0%
!! AAGACACTACCACTTTTCCC+TGG - chr1.4:51570325-51570344 None:intergenic 45.0%
!! ATGCTAGATTTGGTGAGACC+CGG + chr1.4:51568027-51568046 MS.gene47423:CDS 45.0%
!! ATGGATTGGTTGACAGCATC+AGG + chr1.4:51569702-51569721 MS.gene47423:intron 45.0%
!! CTATCCTCAAGGTCTTGTTC+TGG + chr1.4:51573001-51573020 MS.gene47423:CDS 45.0%
!! CTGATGCTTAGTTTGCAGCT+CGG + chr1.4:51568404-51568423 MS.gene47423:CDS 45.0%
!! CTTGGAGGCTTGTTTTCAAC+TGG + chr1.4:51570471-51570490 MS.gene47423:intron 45.0%
!!! GAAGTTCGAGCATCGGATTT+TGG + chr1.4:51569451-51569470 MS.gene47423:CDS 45.0%
!!! TTGGTGCCAAAGCAAGCTTT+TGG + chr1.4:51569470-51569489 MS.gene47423:CDS 45.0%
AAACGAGTCTCCACTTACCC+AGG - chr1.4:51567760-51567779 None:intergenic 50.0%
AAATCCTCCGACTGATGAGG+AGG - chr1.4:51569529-51569548 None:intergenic 50.0%
AAATCTGGCCTGGACTTGGA+TGG + chr1.4:51572570-51572589 MS.gene47423:intron 50.0%
AATTGGACCAGCAAAGGACC+TGG - chr1.4:51572609-51572628 None:intergenic 50.0%
ACATACTTACCCTGACCCTC+GGG - chr1.4:51567393-51567412 None:intergenic 50.0%
AGGCAAAGGAACCCTTACCT+GGG + chr1.4:51567740-51567759 MS.gene47423:CDS 50.0%
AGGTGTGAACATGCCAGCAA+GGG + chr1.4:51573793-51573812 MS.gene47423:CDS 50.0%
AGTCTCCACTTACCCAGGTA+AGG - chr1.4:51567755-51567774 None:intergenic 50.0%
ATTCTACTCTCGTCGCTTCC+TGG + chr1.4:51573988-51574007 MS.gene47423:CDS 50.0%
CCGGAATATGACTCGCCATT+AGG - chr1.4:51567351-51567370 None:intergenic 50.0%
CGCATATACTTGGGGTGATG+GGG + chr1.4:51567818-51567837 MS.gene47423:CDS 50.0%
CGGGGTCTTAAAGATGGCAA+AGG + chr1.4:51567864-51567883 MS.gene47423:CDS 50.0%
CGTGGCCACAGTTAGTAGTT+TGG + chr1.4:51567209-51567228 MS.gene47423:CDS 50.0%
CTATCGTCTCCAGGGAAAAG+TGG + chr1.4:51570313-51570332 MS.gene47423:CDS 50.0%
CTATGTTGGGACATGGACAC+GGG + chr1.4:51567845-51567864 MS.gene47423:CDS 50.0%
CTGGACTTGGATGGTCCAAA+AGG + chr1.4:51572579-51572598 MS.gene47423:intron 50.0%
CTGGCATGTTCACACCTAAC+TGG - chr1.4:51573790-51573809 None:intergenic 50.0%
GAATCGCCATCGACCTTTGT+AGG - chr1.4:51567571-51567590 None:intergenic 50.0%
GACTGACAGCAAGTTCTTGG+AGG + chr1.4:51572020-51572039 MS.gene47423:CDS 50.0%
GAGACGAGAAGTTCGAGCAT+CGG + chr1.4:51569444-51569463 MS.gene47423:CDS 50.0%
GAGACTCGTTTGAAGGAAGC+TGG + chr1.4:51567769-51567788 MS.gene47423:CDS 50.0%
GAGGTGGATCTTCTTCTACC+TGG + chr1.4:51573110-51573129 MS.gene47423:CDS 50.0%
GATGGTCCAAAAGGATAGCC+AGG + chr1.4:51572588-51572607 MS.gene47423:intron 50.0%
GCCTACTGAGTCGATGAATG+AGG - chr1.4:51569632-51569651 None:intergenic 50.0%
GCGCATATACTTGGGGTGAT+GGG + chr1.4:51567817-51567836 MS.gene47423:CDS 50.0%
GCTATGTTGGGACATGGACA+CGG + chr1.4:51567844-51567863 MS.gene47423:CDS 50.0%
GCTTAAGGCAACGCATCTTC+CGG - chr1.4:51569171-51569190 None:intergenic 50.0%
GGATCCAAGGAAATCCTGAG+GGG + chr1.4:51567652-51567671 MS.gene47423:CDS 50.0%
GGCAAGTATACCTGGGCTAA+CGG + chr1.4:51567678-51567697 MS.gene47423:CDS 50.0%
GGGGAACTCTCTCTTCCTAA+TGG + chr1.4:51567333-51567352 MS.gene47423:CDS 50.0%
GGTCTTGGCGCATATACTTG+GGG + chr1.4:51567810-51567829 MS.gene47423:CDS 50.0%
GTCTCCACTTACCCAGGTAA+GGG - chr1.4:51567754-51567773 None:intergenic 50.0%
GTCTGACCTACAAAGGTCGA+TGG + chr1.4:51567562-51567581 MS.gene47423:CDS 50.0%
GTGTGTGTGTGTGTGTGTGT+AGG - chr1.4:51570765-51570784 None:intergenic 50.0%
GTGTTCCCATCAAATGTGCC+AGG + chr1.4:51574025-51574044 MS.gene47423:CDS 50.0%
GTTGTCGGGTCACACATTAG+AGG + chr1.4:51573053-51573072 MS.gene47423:CDS 50.0%
TAGGTGTGAACATGCCAGCA+AGG + chr1.4:51573792-51573811 MS.gene47423:CDS 50.0%
TATGTTGGGACATGGACACG+GGG + chr1.4:51567846-51567865 MS.gene47423:CDS 50.0%
TGAAAGGCGGTGGAGTTTAG+AGG + chr1.4:51568124-51568143 MS.gene47423:CDS 50.0%
TGGACACGGGGTCTTAAAGA+TGG + chr1.4:51567858-51567877 MS.gene47423:CDS 50.0%
TTAGCCCAGGTATACTTGCC+TGG - chr1.4:51567678-51567697 None:intergenic 50.0%
TTGGCAATGCTTGCAGAGGA+AGG + chr1.4:51572135-51572154 MS.gene47423:CDS 50.0%
TTTACTTGGAGCCGTCTTGG+CGG + chr1.4:51571567-51571586 MS.gene47423:CDS 50.0%
! CTTTTGGACCATCCAAGTCC+AGG - chr1.4:51572581-51572600 None:intergenic 50.0%
! GATGGCAGACAGCTTCCTTT+TGG - chr1.4:51567900-51567919 None:intergenic 50.0%
! GCATATACTTGGGGTGATGG+GGG + chr1.4:51567819-51567838 MS.gene47423:CDS 50.0%
! GCTTTTACTTGGAGCCGTCT+TGG + chr1.4:51571564-51571583 MS.gene47423:CDS 50.0%
! GGGGGATGAGGAATGGATTT+GGG + chr1.4:51567451-51567470 MS.gene47423:CDS 50.0%
! GGTGTTTTCTCCATGGTCCT+TGG + chr1.4:51570520-51570539 MS.gene47423:intron 50.0%
! TATGATGGTGAGTGGAGACG+GGG + chr1.4:51567432-51567451 MS.gene47423:CDS 50.0%
! TGGTTTGGCAATGCTTGCAG+AGG + chr1.4:51572131-51572150 MS.gene47423:CDS 50.0%
!! AAGGTCTTGTTCTGGTCCCT+CGG + chr1.4:51573009-51573028 MS.gene47423:CDS 50.0%
!! CATATACTTGGGGTGATGGG+GGG + chr1.4:51567820-51567839 MS.gene47423:CDS 50.0%
!! GCCTCATTCATCGACTCAGT+AGG + chr1.4:51569628-51569647 MS.gene47423:intron 50.0%
AACGTTGCCGAGAAGGGATC+CGG - chr1.4:51567370-51567389 None:intergenic 55.0%
ACGGAACACCACCTGTTCTC+CGG - chr1.4:51568049-51568068 None:intergenic 55.0%
ACGGATTCAGTCTTCGCCGA+TGG + chr1.4:51568191-51568210 MS.gene47423:CDS 55.0%
AGAACAGGTGGTGTTCCGTC+TGG + chr1.4:51568050-51568069 MS.gene47423:CDS 55.0%
AGGATAGCCAGGTCCTTTGC+TGG + chr1.4:51572599-51572618 MS.gene47423:intron 55.0%
CAGCAGCTGAAGCTCGCAAT+CGG - chr1.4:51573082-51573101 None:intergenic 55.0%
CAGGCAAAGGAACCCTTACC+TGG + chr1.4:51567739-51567758 MS.gene47423:CDS 55.0%
GGAACCCTTACCTGGGTAAG+TGG + chr1.4:51567747-51567766 MS.gene47423:CDS 55.0%
GGACCATGGAGAAAACACCC+AGG - chr1.4:51570519-51570538 None:intergenic 55.0%
GGCGAAGACTGAATCCGTTG+AGG - chr1.4:51568189-51568208 None:intergenic 55.0%
GGCGCATATACTTGGGGTGA+TGG + chr1.4:51567816-51567835 MS.gene47423:CDS 55.0%
GGGACCAGAACAAGACCTTG+AGG - chr1.4:51573008-51573027 None:intergenic 55.0%
GGTGGCTATATCCACGGTAC+AGG + chr1.4:51567519-51567538 MS.gene47423:CDS 55.0%
GGTGGGACAATGTCAGGCAA+AGG + chr1.4:51567726-51567745 MS.gene47423:CDS 55.0%
GTACGACGTCATAAGCCTCG+TGG - chr1.4:51573856-51573875 None:intergenic 55.0%
TACCATCATCTGCTCCCCGA+GGG - chr1.4:51573028-51573047 None:intergenic 55.0%
TTACTTGGAGCCGTCTTGGC+GGG + chr1.4:51571568-51571587 MS.gene47423:CDS 55.0%
TTTGGTGAGACCCGGAGAAC+AGG + chr1.4:51568035-51568054 MS.gene47423:CDS 55.0%
! ATGATGGTGAGTGGAGACGG+GGG + chr1.4:51567433-51567452 MS.gene47423:CDS 55.0%
! CGGGGGATGAGGAATGGATT+TGG + chr1.4:51567450-51567469 MS.gene47423:CDS 55.0%
!! AGGTCTTGTTCTGGTCCCTC+GGG + chr1.4:51573010-51573029 MS.gene47423:CDS 55.0%
!! GTGATGGGGGGTGCTATGTT+GGG + chr1.4:51567832-51567851 MS.gene47423:CDS 55.0%
AACAGGAGGACGCAGCTGCT+GGG - chr1.4:51572097-51572116 None:intergenic 60.0%
AGGGGCCAGGCAAGTATACC+TGG + chr1.4:51567670-51567689 MS.gene47423:CDS 60.0%
CAAGGAAATCCTGAGGGGCC+AGG + chr1.4:51567657-51567676 MS.gene47423:CDS 60.0%
CGATTGCGAGCTTCAGCTGC+TGG + chr1.4:51573080-51573099 MS.gene47423:CDS 60.0%
CGGAACACCACCTGTTCTCC+GGG - chr1.4:51568048-51568067 None:intergenic 60.0%
CTACCATCATCTGCTCCCCG+AGG - chr1.4:51573029-51573048 None:intergenic 60.0%
CTCGGGAACGTTGCCGAGAA+GGG - chr1.4:51567376-51567395 None:intergenic 60.0%
CTGGCCCCTCAGGATTTCCT+TGG - chr1.4:51567659-51567678 None:intergenic 60.0%
CTTCTCGGCAACGTTCCCGA+GGG + chr1.4:51567375-51567394 MS.gene47423:CDS 60.0%
GACACCTCCTCATCAGTCGG+AGG + chr1.4:51569522-51569541 MS.gene47423:CDS 60.0%
GCAAGGGCAGAGCAGATACC+AGG + chr1.4:51573809-51573828 MS.gene47423:CDS 60.0%
GGGGCCAGGCAAGTATACCT+GGG + chr1.4:51567671-51567690 MS.gene47423:CDS 60.0%
GGTATCTGCTCTGCCCTTGC+TGG - chr1.4:51573809-51573828 None:intergenic 60.0%
GTATACTTGCCTGGCCCCTC+AGG - chr1.4:51567669-51567688 None:intergenic 60.0%
TAACAGGAGGACGCAGCTGC+TGG - chr1.4:51572098-51572117 None:intergenic 60.0%
TGGAGACGGGGGATGAGGAA+TGG + chr1.4:51567444-51567463 MS.gene47423:CDS 60.0%
! AGCTTCAGCTGCTGGTGACG+AGG + chr1.4:51573088-51573107 MS.gene47423:CDS 60.0%
! TTCAGCTGCTGGTGACGAGG+AGG + chr1.4:51573091-51573110 MS.gene47423:CDS 60.0%
!! AGGCGGCTGTTTCTGGCATC+TGG + chr1.4:51573279-51573298 MS.gene47423:intron 60.0%
!! GGGGGTGCTATGTTGGGACA+TGG + chr1.4:51567838-51567857 MS.gene47423:CDS 60.0%
!! GGTCTTGTTCTGGTCCCTCG+GGG + chr1.4:51573011-51573030 MS.gene47423:CDS 60.0%
!! GGTGATGGGGGGTGCTATGT+TGG + chr1.4:51567831-51567850 MS.gene47423:CDS 60.0%
ACAGGAGGACGCAGCTGCTG+GGG - chr1.4:51572096-51572115 None:intergenic 65.0%
CCTCGGGAACGTTGCCGAGA+AGG - chr1.4:51567377-51567396 None:intergenic 65.0%
CCTTCTCGGCAACGTTCCCG+AGG + chr1.4:51567374-51567393 MS.gene47423:CDS 65.0%
GGCAACGTTCCCGAGGGTCA+GGG + chr1.4:51567381-51567400 MS.gene47423:CDS 65.0%
GGTGAGACCCGGAGAACAGG+TGG + chr1.4:51568038-51568057 MS.gene47423:CDS 65.0%
GTCCCTCGGGGAGCAGATGA+TGG + chr1.4:51573023-51573042 MS.gene47423:CDS 65.0%
GTGAGTGGAGACGGGGGATG+AGG + chr1.4:51567439-51567458 MS.gene47423:CDS 65.0%
! AGCTGCTGGTGACGAGGAGG+TGG + chr1.4:51573094-51573113 MS.gene47423:CDS 65.0%
CGGCAACGTTCCCGAGGGTC+AGG + chr1.4:51567380-51567399 MS.gene47423:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 51567198 51574051 51567198 ID=MS.gene47423
chr1.4 mRNA 51567198 51574051 51567198 ID=MS.gene47423.t1;Parent=MS.gene47423
chr1.4 exon 51567198 51568432 51567198 ID=MS.gene47423.t1.exon1;Parent=MS.gene47423.t1
chr1.4 CDS 51567198 51568432 51567198 ID=cds.MS.gene47423.t1;Parent=MS.gene47423.t1
chr1.4 exon 51569414 51569581 51569414 ID=MS.gene47423.t1.exon2;Parent=MS.gene47423.t1
chr1.4 CDS 51569414 51569581 51569414 ID=cds.MS.gene47423.t1;Parent=MS.gene47423.t1
chr1.4 exon 51570237 51570402 51570237 ID=MS.gene47423.t1.exon3;Parent=MS.gene47423.t1
chr1.4 CDS 51570237 51570402 51570237 ID=cds.MS.gene47423.t1;Parent=MS.gene47423.t1
chr1.4 exon 51571072 51571182 51571072 ID=MS.gene47423.t1.exon4;Parent=MS.gene47423.t1
chr1.4 CDS 51571072 51571182 51571072 ID=cds.MS.gene47423.t1;Parent=MS.gene47423.t1
chr1.4 exon 51571416 51571603 51571416 ID=MS.gene47423.t1.exon5;Parent=MS.gene47423.t1
chr1.4 CDS 51571416 51571603 51571416 ID=cds.MS.gene47423.t1;Parent=MS.gene47423.t1
chr1.4 exon 51572011 51572156 51572011 ID=MS.gene47423.t1.exon6;Parent=MS.gene47423.t1
chr1.4 CDS 51572011 51572156 51572011 ID=cds.MS.gene47423.t1;Parent=MS.gene47423.t1
chr1.4 exon 51572976 51573141 51572976 ID=MS.gene47423.t1.exon7;Parent=MS.gene47423.t1
chr1.4 CDS 51572976 51573141 51572976 ID=cds.MS.gene47423.t1;Parent=MS.gene47423.t1
chr1.4 exon 51573778 51574051 51573778 ID=MS.gene47423.t1.exon8;Parent=MS.gene47423.t1
chr1.4 CDS 51573778 51574051 51573778 ID=cds.MS.gene47423.t1;Parent=MS.gene47423.t1
Gene Sequence

>MS.gene47423

ATGTCTGGCTCCGTGGCCACAGTTAGTAGTTTGGATCGAACACAATCTCTTGCTATCTTTTCTAACATAGACCCTATATCTATATTGACAAACGGCGAAGCTGGTCATTCCACTGAAATTGCTGGTTTTAGAGTAGGGGAACTCTCTCTTCCTAATGGCGAGTCATATTCCGGATCCCTTCTCGGCAACGTTCCCGAGGGTCAGGGTAAGTATGTATGGTCAGATGGTTGTGTATATGATGGTGAGTGGAGACGGGGGATGAGGAATGGATTTGGGAAAATACAATGGCCTTCTGGTGTGTTGTATGAAGGTGAATTCTCTGGTGGCTATATCCACGGTACAGGATCATATATTGGCCCAGAAAGTCTGACCTACAAAGGTCGATGGCGATTCAATCTTAAACATGGCCTAGGTTATCAAGTTTATCCAAATGGAGATATATTTGAAGGCTCTTGGATCCAAGGAAATCCTGAGGGGCCAGGCAAGTATACCTGGGCTAACGGAAATGTATATTTGGGAAATATGAAAGGTGGGACAATGTCAGGCAAAGGAACCCTTACCTGGGTAAGTGGAGACTCGTTTGAAGGAAGCTGGTTAAATGGTATGATGCATGGTCTTGGCGCATATACTTGGGGTGATGGGGGGTGCTATGTTGGGACATGGACACGGGGTCTTAAAGATGGCAAAGGAACCTTTTATCCAAAAGGAAGCTGTCTGCCATCTGCACAAGAAGTATATCTCAATGCATTGAGAAAAAGAGGGCTATTACCAGATTTGAGAAAACAGAATCAGGTGCATATTCATAACACTGCTTCAGTTGATATGGGAAATGCTAGATTTGGTGAGACCCGGAGAACAGGTGGTGTTCCGTCTGGCACAGAAAACCTGTTAAATCTGGATCAATCTCGCAGCAAGAATGTTTCTCTTGAAAGGCGGTGGAGTTTAGAGGTAGCTATTGAGAAAGTGATTGGTCATGATTCACAATTTGCCTCAACGGATTCAGTCTTCGCCGATGGAAATAAAGAGGTTAACGAAAAGATCCCCATTTTGGAGCGTGAATATATGCAAGGGGTATTAATAAGTGAGGTAGTCTTAAATAATAGTTTTGCATCACTTACTAGAAGAGCAAAGCAGCTTAAAAAAAAAATTGCCAAAGATATCAAAAGGCCCGGTGAACAAATTATTAAAGGCCACAGGAGTTATGATCTGATGCTTAGTTTGCAGCTCGGAATAAGGTAAAAGATACTATCTTGGCTTTTTGCACAATCAAGCTGCTTTTGTTGTTTTCATTTATAACAGTGCTACTGCTACATGATTTTGCTTTCTACAAGTTTTTTTTTATTTTTTTTTTTTATTGTTACGAACATAGAATTTTCAAGATGAATCCATGTTAGAAGGAGGTCATAATTTTCTTATGGGAATTTTCATATGGTCATGTACATCTTTTCACTGATCAGATTATCAGACAGTTTTTATGTTCACGGAAATATTTTTTATTCTTCCTTGTTACCAACTGTAAAGAATAGAAGGGATGTAATGCCTCTTAAAGAGATTGAGGTTTTAGGTTTTCAATTTTCAGATTATTATCCTTTGAGCTATATTTTGCTTTGAAATCACTAAATTGTCACTCATGGGATTCAAGAAAAAAGAATGTGGATTACCCCTATATTTGTTTTTTAACCACAGAAAAGAAATGTGGTTATTGAAAATGGGAAAATCACAAACAAGCGAGCGTGAATAAAATATATCAGTTATAAAAAAAATTAACCATTAACAATTCAAGTTAATTAATCATCAAAATCAAACACGCTTTGAATATCAGTAATTATGGTTGAGTGCTAAATTGTATTATACTTTTTTTTTTCTTCGGAAACTGTTTTATACTTTTTATATCAATGATTCATTTTATACCTTTTTCCCCCAAAAAGCAAGATATTCCATTTCATTTCCTATTGGGAATCACATAGCAACCGGAAGATGCGTTGCCTTAAGCAAACAAATACTATTTGCTTCTCTTTTGTATTTCACAATTGTTATAGTAGAACTAACACAGGTTTTCTTGATTCATTATTCCTGTTAATGACATGAGGCAACCATATACAATGAAAGAACCAAATGTACCAAACTTTAGAAGAAATTAAGTTATTCTGGAATATCAATATTTGCTTTTGCATGGTTTTCTGTAAGTAACTTAAAAATGGGCTTCAAATGGCTAGGTATACTGTGGGAAAGATTACCCCCATACAGAGACGAGAAGTTCGAGCATCGGATTTTGGTGCCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTGACACCTCCTCATCAGTCGGAGGATTTCAAATGGAAAGATTACTGCCCTATGGTGTTCAGGTTAGTTTAAACTTTTTTAGGCATGCTGTTTCTTTATATGACTGTTGCCTCATTCATCGACTCAGTAGGCATGCATTTTAAACCAATCCTTGCTTTACTAAATCACTACATGCCACTCTTATGGATTGGTTGACAGCATCAGGCTATATGTTCTATGTTCATCTGAATATAGTTTTTTCCTCTTACAGTAACTACTGAATTTTAATCTTCCATATTGTTTCTATAATTTTCCTTAGTGTTCTGATATTAGAAATAGCAAAAACAGATGCACACACAATAAATTTTGTACATCTGATTTTGAATATCCATTTCAAATTGCAATACCTACTTGACAACTTAAGGTGAATACAAGAATGGAATAACTATTCAAAACTGACTCTTATTTGTGTAATTGATTATTAAAACATGTAGATTTCATGTTGGATTCTTGCTTCAACTACACAAATACCTCTAATGTATGATGTGATGTGTGAACTTCATAATATTGCAAAAAGAAAAAGAAATAAAGTAGATTTGGAAATTGACTGTTCATTTTTTAGAATTGTTTTTGTATACATGGTAAGGAAACACTATTGCAGCCTCTGTTTTGCTCTCGTCTATTTCTTTCTTTCACCTTTCATATGCTTGTTATATATGACCTTGTGACCTTTTGCAGAAATTTGAGAGAGTTGTTCAAGATTGATGCTGCAGACTACATGATGTCCATTTGTGGAAATGATGCTTTGAGAGAACTATCGTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCTTGTCTCAGGATGACCGTTTCATGATCAAGACACTGAGAAGATCAGAAGTAAAGGTGTGTTTATTTTGTGGTTCTTGTTCATTAGCACTTGTTGCAGTTGCAGATATTGATATACAAACTTCCTTGGAGGCTTGTTTTCAACTGGTTCTGTTCCATATTTCATTTTACCTGGGTGTTTTCTCCATGGTCCTTGGTTATCAATGACATACTTGCAAAAAGGGGCTGATGACATCATTGTGCTCAGAATGTTGTCAAGTCAAATGTTAAACAAACTTCATAAATATATTAAGAAAACATTAAATAGTAATTACAATAATCAAACATATAAATAACTTACCATCATTCTTACATAAGTTACGAGCCTGCTTCATTAACTTAAATGCAGTTTTTCATATGTACATGATCCGGATGTACCTACACACACACACACACACACATATCAAGAGGTCTTTGCAGACAGAAATAGGATGTCTTCAGTTTAATATTGTCTGCCTCATTAACTTGGATGATATTCTTTGTTTTTCTGTTTCTCTTTTCTCTTTGATAAAACTACTTTTTCAGTCCAAGAAGTTAGAATAGAAAATTGAGCTTTTAGCTCAGATTTTTTGAATTAACTTGTGGTGCATATGTTTAATAATGATATTTTAGTGTTCACATGTTCTTCTCTACTTTTCAGTTTTTGATGTAAAATAGAAAATGTAGTGACCATAATCTGAAATGTAGGTTCTTCTAAGAATGCTTCCAGATTATCATCATCATGTGAAGTCATATGAGAATACACTCGTTACAAAGTTTTTTGGTTTGCACAGGATTATACCTTCAAGTGGCCAAAAGGTAATGCTCGTTTATCTGCAATTGCGTCATTTTCTTGATTATTTATCAATTACTAATGCGACTTGCACATTAATTCATGCAAATCAGAAAGATCAAAATAATGAGAATTTTTATAAAGCACATGTACGACAGCAAATATTTGAACCTATCATTATTACATCTTCATGCCAAACAAAAAAATTATTTTCTTTAATTTGAAGACGAGCATTTATATATAATTTTCTATCTTGCAGTTCCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTGAGGATCCATAGAAGATTTGATTTAAAAGGTTCATCCCTTGGACGTTCTTCCGACAAGATAGAAATCGATGAGAATACCACTCTTAAAGATTTGGATTTGAACTACTGCTTTTACTTGGAGCCGTCTTGGCGGGAGTCTTTATTAAAGTAAGGGGCATTTACTAAATACTTTCTTAAATCATGTATTTCCATTGTAAGAAAATATTTTATTCCTAGGAACACAGAGGAGAAAGACAAATTACCGTCCTTCAACAAAGTAATTTAGAACAAAGCAAATAAAAATAGATATGTATTGTACTTATATTATTAAATTTGTACATTTGAGGTAATGCAGCAGAATTCTCATCACATTTTTTTATACTGTATACAATGAACATGTAAAATATTTTAAGGACTAATGTCAATCTAATCTATTTATTCTTTCTTGCTAGAAATAGTAACCATTTGTTTGAATTTCAAGTTTTTCTGATGAGTAGCAAATTTTCACGATGTATAGTCCTGCAATGCTCAACTTCAAAACATGCATTTTACCTTTTACTCGTACTCTTGTGCAGGCAGATTGAGACTGACAGCAAGTTCTTGGAGGAACAGCACATAATGGACTATAGTCTTCTTCTAGGTGTTCATTATCGAGCTCCCCAGCAGCTGCGTCCTCCTGTTAGTATAAGTTCAGATGGTTTGGCAATGCTTGCAGAGGAAGGTATGTATTATTAATCAAGAAAGCTAATGTTTAGTAATTGGCCTTTATGTGATTGACATTTATTTCTGGCAAAAATACTATTGTGTGTTTTACCTAAAGTTGGCATATATCATCGGTATAAAACTAATGATCTGTAAATGAGAGATATGACATTGTGTAATCAGCAGATGATATAAACACTGCTTATTTTGGTATTATTAGGTAGTTTAGATGATGAGATCTACGAGGGGGTATTCCAGAAAATCTTTCTTTTACATCATAAATTGACTAATGCCCATCTGACCTTTTTCACAAAAGCATTTTATTATCAATGATATGTGATGATTGTTTATTAACATGAGATGGATATGAATGGCTAAGTTTAGATTCCTGCTTGAAAAATGTTAGGAGCTATTTTTAGGACCAATGTTGTAAAATCTGGCCTGGACTTGGATGGTCCAAAAGGATAGCCAGGTCCTTTGCTGGTCCAATTAAACATGCTGATTGGTTTTCAGTCAAACCCTTTTAACTTAGCAGCACTGTCTTATTATGTCTTGCATTTTGGATTTGTTGTATATTGGTTTTTTTTCTTCTAACTGAAACGGGCAAATGAGCTCTTGAATTGAGTATTCGGTTGGTTGACATCCAATCAAAGTTTTACAATTATATGATGATTATGGACCACATCATTTTAGAAATTCTTATAGGCTTATCCGGTTATCTATAATTTGGTCTATCATTATTTTTAAAGTTTCAGCAATGACTTGTATTCTTGTATTTTGTTATAGCACTATAATTATGGAACTGATTAATTTTGAAAACTTCGATAATCAACTACAGACCCTCTAGAGGATGAAGTATATAACTATCCTCAAGGTCTTGTTCTGGTCCCTCGGGGAGCAGATGATGGTAGTGTTGTTGTCGGGTCACACATTAGAGGTAGCCGATTGCGAGCTTCAGCTGCTGGTGACGAGGAGGTGGATCTTCTTCTACCTGGTACTGCAAGGTAATTCTTCATGAGTTTAATGGTTGTGTTTTATGTTATTTATCACTTTTATCGTATTCGTAGTACTCCAGCTATCCTATTATTAGTGTGATCATAGCATTTACAAATTCACAATCACTTTTATGTTCATAAAATACAGGCGGCTGTTTCTGGCATCTGGTGCAATACTCCAGTTGTTGGGAGAGTAGTTTATGTTCTGCTAGGGTGCTATCAGTTTAGATTGCAGAACAATTACTCTTGAAACGTAACTCATTCATCTTCTTTTTTAGAACAAAACCTCCATAGATTTTTGCCGTTCAAGCTCTCGTATATTTACTCGTCTTCTCTCCACATCCTCTAACTCCTAACACTAGTTGCACTCCTACTTTTAAATGTGTACATGTTGTATGATTGACACAATTTGACAGATGATCTAGTCATTACCAATGATTGCACCACACTTCTGCATGAAAAAAATTCTTGTTAATATCTCTTAATTGTTATCGTATGTGTGAAATGTTATTTGAAACAAACAATCTACCTATTTCACTTGGGATTATATTGATTAAGGCAAAATTCTTCCTTTAGTGCACCATTAAATAGTTGCTAGAATATAATAGACTGAGGGTTTTTCTTTATTGTCAACTCGTTATGCAGACTTCAAATCCAGTTAGGTGTGAACATGCCAGCAAGGGCAGAGCAGATACCAGGAAAAGAGGAAACTCAAATGTTCCACGAGGCTTATGACGTCGTACTATACCTGGGTATCATTGATATATTGCAAGATTACAACATGACTAAGAGGATTGAACATGCGTATAAATCACTTCAGTTTGATTCGTTATCTATATCGGCGGTGGATCCTACATTCTACTCTCGTCGCTTCCTGGATTTTATCCAGAAAGTGTTCCCATCAAATGTGCCAGGATAA
Protein sequence

>MS.gene47423.t1

MSGSVATVSSLDRTQSLAIFSNIDPISILTNGEAGHSTEIAGFRVGELSLPNGESYSGSLLGNVPEGQGKYVWSDGCVYDGEWRRGMRNGFGKIQWPSGVLYEGEFSGGYIHGTGSYIGPESLTYKGRWRFNLKHGLGYQVYPNGDIFEGSWIQGNPEGPGKYTWANGNVYLGNMKGGTMSGKGTLTWVSGDSFEGSWLNGMMHGLGAYTWGDGGCYVGTWTRGLKDGKGTFYPKGSCLPSAQEVYLNALRKRGLLPDLRKQNQVHIHNTASVDMGNARFGETRRTGGVPSGTENLLNLDQSRSKNVSLERRWSLEVAIEKVIGHDSQFASTDSVFADGNKEVNEKIPILEREYMQGVLISEVVLNNSFASLTRRAKQLKKKIAKDIKRPGEQIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGAKASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLVTKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIETDSKFLEEQHIMDYSLLLGVHYRAPQQLRPPVSISSDGLAMLAEEDPLEDEVYNYPQGLVLVPRGADDGSVVVGSHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKEETQMFHEAYDVVLYLGIIDILQDYNMTKRIEHAYKSLQFDSLSISAVDPTFYSRRFLDFIQKVFPSNVPG