Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47742.t1 | XP_003617330.1 | 97.3 | 670 | 18 | 0 | 1 | 670 | 47 | 716 | 0.00E+00 | 1297 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47742.t1 | F4INY4 | 62.7 | 683 | 234 | 6 | 1 | 670 | 40 | 714 | 2.4e-239 | 829.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47742.t1 | G7KD14 | 97.3 | 670 | 18 | 0 | 1 | 670 | 47 | 716 | 0.0e+00 | 1297.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene47742 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene47742 | 0.800794 | 1.22E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 148 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGTCCCACAATATATTT+TGG | 0.151600 | 5.3:+72864433 | MS.gene47742:intron |
| TCAGGTCAAAACATACTATT+TGG | 0.178819 | 5.3:+72866787 | MS.gene47742:intron |
| AACTGGCCTTACACCGTTAA+TGG | 0.185838 | 5.3:+72867015 | MS.gene47742:CDS |
| CTTTGATGAAGCTATTAATT+TGG | 0.186777 | 5.3:+72866907 | MS.gene47742:CDS |
| ATCACTCCCACCCTTCTTAT+TGG | 0.200185 | 5.3:-72863413 | None:intergenic |
| CAAAACAACATCAACTATTT+CGG | 0.218158 | 5.3:-72867251 | None:intergenic |
| TAGCGCAGTTGTTCCGTCTT+TGG | 0.225785 | 5.3:-72867110 | None:intergenic |
| GTACTACTGGAGTTCTATTA+AGG | 0.228115 | 5.3:+72865492 | MS.gene47742:CDS |
| ATTAAGGGTGTTGGTTTCTA+AGG | 0.229619 | 5.3:+72865508 | MS.gene47742:CDS |
| TTGGCGCAGATTGCAATTTA+AGG | 0.237449 | 5.3:+72867086 | MS.gene47742:CDS |
| AATTATCAGCATTCTTTAAC+TGG | 0.263056 | 5.3:+72866998 | MS.gene47742:CDS |
| TGCTGATAATTGAAGAGTTC+TGG | 0.265951 | 5.3:-72866986 | None:intergenic |
| TTTATTATTTCAGCAGCTTC+TGG | 0.268250 | 5.3:-72867157 | None:intergenic |
| AGATGAAATTACTCGGAAAT+TGG | 0.304460 | 5.3:+72863621 | MS.gene47742:CDS |
| AAGCCTGGAACTTGGATAAC+TGG | 0.306634 | 5.3:-72866666 | None:intergenic |
| TTCCCCAATTCTACCTCTTC+CGG | 0.307027 | 5.3:-72867044 | None:intergenic |
| ATAGGCATTCTCTTGAGTTC+TGG | 0.316942 | 5.3:-72867739 | None:intergenic |
| ATGTGCATGCTCTTATCTTT+TGG | 0.319398 | 5.3:+72867067 | MS.gene47742:CDS |
| TGACATCACTCACATCATTA+TGG | 0.332230 | 5.3:+72865574 | MS.gene47742:CDS |
| AGAGTTGACACATTATTATA+AGG | 0.334582 | 5.3:-72867589 | None:intergenic |
| AGACGTAGATGAGGATATAA+AGG | 0.360353 | 5.3:-72866441 | None:intergenic |
| AAAACAACATCAACTATTTC+GGG | 0.363646 | 5.3:-72867250 | None:intergenic |
| GGGTTTAAGTCTAAAAGTTA+TGG | 0.364494 | 5.3:+72863248 | MS.gene47742:CDS |
| TCTTCCTCATTTCACATTCT+CGG | 0.373502 | 5.3:+72863450 | MS.gene47742:CDS |
| AAGCAGGTAGTTCTCATATC+TGG | 0.375216 | 5.3:+72864146 | MS.gene47742:intron |
| TGGAAGCTGTAACTTCTAGA+AGG | 0.380592 | 5.3:+72863641 | MS.gene47742:CDS |
| TGCCCAGTTATCCAAGTTCC+AGG | 0.382981 | 5.3:+72866663 | MS.gene47742:CDS |
| TGTCAACTCTTCAATCATCT+TGG | 0.392208 | 5.3:+72867602 | MS.gene47742:CDS |
| AGTTCTGGAGTCTGAAAATC+TGG | 0.398961 | 5.3:-72867724 | None:intergenic |
| TTGGATTATATGTGGGGTAA+GGG | 0.400723 | 5.3:+72864452 | MS.gene47742:CDS |
| TTGCCGGAAGAGGTAGAATT+GGG | 0.401573 | 5.3:+72867041 | MS.gene47742:CDS |
| TCTATTGTTCTATGTACTAC+TGG | 0.404227 | 5.3:+72865479 | MS.gene47742:CDS |
| CTTATCATGTGATTGTTTGT+TGG | 0.409380 | 5.3:-72866866 | None:intergenic |
| TTTGGATTATATGTGGGGTA+AGG | 0.410615 | 5.3:+72864451 | MS.gene47742:CDS |
| TTTGCCGGAAGAGGTAGAAT+TGG | 0.410715 | 5.3:+72867040 | MS.gene47742:CDS |
| AGAGAGAGAGGTGAGGCTGC+TGG | 0.411317 | 5.3:+72864633 | MS.gene47742:CDS |
| GATCATATCTCTGCATTCAA+TGG | 0.417789 | 5.3:+72867414 | MS.gene47742:CDS |
| GCATTCAATGGTTCCAACCT+TGG | 0.417827 | 5.3:+72867426 | MS.gene47742:CDS |
| GCTGATAATTGAAGAGTTCT+GGG | 0.419064 | 5.3:-72866985 | None:intergenic |
| GGTTTAAGTCTAAAAGTTAT+GGG | 0.423476 | 5.3:+72863249 | MS.gene47742:CDS |
| TGCAAAACGACGGTCATCAT+TGG | 0.428088 | 5.3:-72863204 | None:intergenic |
| TACTACTGGAGTTCTATTAA+GGG | 0.441536 | 5.3:+72865493 | MS.gene47742:CDS |
| CGTGCTGGCCGTTGTCAACC+TGG | 0.442136 | 5.3:+72867658 | MS.gene47742:CDS |
| TACAAATGATAACAAATTCC+AGG | 0.443741 | 5.3:-72867676 | None:intergenic |
| GTGGGACCTACTGTCAGAAT+TGG | 0.443943 | 5.3:+72866946 | MS.gene47742:CDS |
| AGTTCCAGGCTTCACTTATC+CGG | 0.446106 | 5.3:+72866677 | MS.gene47742:CDS |
| ACACCGTTAATGGTGTTTGC+CGG | 0.446621 | 5.3:+72867025 | MS.gene47742:CDS |
| GACAGCTGTTTCAGCGAGAT+TGG | 0.451628 | 5.3:-72867506 | None:intergenic |
| CGGCGTATCTCTGCAATGTC+AGG | 0.459055 | 5.3:+72864506 | MS.gene47742:CDS |
| TGGAGTTCTATTAAGGGTGT+TGG | 0.459657 | 5.3:+72865499 | MS.gene47742:CDS |
| CAAACACCATTAACGGTGTA+AGG | 0.461307 | 5.3:-72867021 | None:intergenic |
| GATAAGTGAAGCCTGGAACT+TGG | 0.461806 | 5.3:-72866674 | None:intergenic |
| TGCGCTAGAGATTGCTGAAA+GGG | 0.462165 | 5.3:+72867126 | MS.gene47742:CDS |
| CTTCCGGCAAACACCATTAA+CGG | 0.463274 | 5.3:-72867028 | None:intergenic |
| GAAGAGTTCTGGGGTTCCTT+CGG | 0.463538 | 5.3:-72866975 | None:intergenic |
| TTAAGGGTGTTGGTTTCTAA+GGG | 0.466090 | 5.3:+72865509 | MS.gene47742:CDS |
| ATGAAGCTATTAATTTGGCT+TGG | 0.469167 | 5.3:+72866912 | MS.gene47742:CDS |
| ACCTGGTGATGGAAACTTGA+AGG | 0.469278 | 5.3:+72863516 | MS.gene47742:CDS |
| TCCAACCTTGGAGCAAAAGA+AGG | 0.473159 | 5.3:+72867438 | MS.gene47742:CDS |
| TAATTGCTGTCACAAAATCT+TGG | 0.473859 | 5.3:+72867795 | MS.gene47742:CDS |
| ATATGTACTGATTCAAAAGA+TGG | 0.474057 | 5.3:+72867295 | MS.gene47742:CDS |
| TGGATTATATGTGGGGTAAG+GGG | 0.477150 | 5.3:+72864453 | MS.gene47742:CDS |
| TTTATATCCTCATCTACGTC+TGG | 0.483477 | 5.3:+72866443 | MS.gene47742:CDS |
| TGATGGAAACTTGAAGGATC+TGG | 0.485301 | 5.3:+72863522 | MS.gene47742:CDS |
| TGCAGACATAGCTCCTCAAT+AGG | 0.487749 | 5.3:-72867757 | None:intergenic |
| TCCTTCAAGTTTCCATCACC+AGG | 0.489330 | 5.3:-72863517 | None:intergenic |
| CATTCTCGGAAGAGTCAAAA+CGG | 0.495959 | 5.3:+72863464 | MS.gene47742:CDS |
| CCAACATGAAGTCTGAATAT+CGG | 0.496078 | 5.3:-72865911 | None:intergenic |
| TCAGGATGAAATTCATGAAA+GGG | 0.498098 | 5.3:+72865887 | MS.gene47742:intron |
| GGATTATATGTGGGGTAAGG+GGG | 0.498239 | 5.3:+72864454 | MS.gene47742:CDS |
| GTCAGAAATTTCATCCTTCG+CGG | 0.498896 | 5.3:-72865555 | None:intergenic |
| AGAAAATCTCGCAGTATCAA+TGG | 0.500493 | 5.3:-72866625 | None:intergenic |
| TTAATGGTGTTTGCCGGAAG+AGG | 0.506210 | 5.3:+72867031 | MS.gene47742:CDS |
| GGAAGAGTCAAAACGGGCAA+TGG | 0.507368 | 5.3:+72863471 | MS.gene47742:CDS |
| GTTCTCATATCTGGTGAGAC+TGG | 0.511204 | 5.3:+72864155 | MS.gene47742:CDS |
| GCAGAGTACAAGTTTGAAGC+TGG | 0.513941 | 5.3:+72863176 | None:intergenic |
| TTATTTCAGCAGCTTCTGGT+TGG | 0.515110 | 5.3:-72867153 | None:intergenic |
| TTCAGGATGAAATTCATGAA+AGG | 0.519015 | 5.3:+72865886 | MS.gene47742:intron |
| GACGTACACTATATCATCAA+TGG | 0.519039 | 5.3:-72867530 | None:intergenic |
| GAAGAGTCAAAACGGGCAAT+GGG | 0.522524 | 5.3:+72863472 | MS.gene47742:CDS |
| AAGCAACGAGAAGGGCGTGC+TGG | 0.525875 | 5.3:+72867643 | MS.gene47742:CDS |
| CATAGACACTGGGCGAATGA+AGG | 0.529035 | 5.3:+72867552 | MS.gene47742:CDS |
| TCAGAATTGGTTTCTTCCGA+AGG | 0.529870 | 5.3:+72866959 | MS.gene47742:CDS |
| TATAATCCAAAATATATTGT+GGG | 0.534277 | 5.3:-72864439 | None:intergenic |
| GACGTAGATGAGGATATAAA+GGG | 0.540193 | 5.3:-72866440 | None:intergenic |
| TGGAGAAAATGTTGGATACA+AGG | 0.545298 | 5.3:+72864653 | MS.gene47742:CDS |
| GGTCAAAACATACTATTTGG+AGG | 0.545786 | 5.3:+72866790 | MS.gene47742:intron |
| ACTCTGCTCTTCTGTCGAGC+TGG | 0.546153 | 5.3:-72867197 | None:intergenic |
| CAACATCAACTATTTCGGGT+TGG | 0.547694 | 5.3:-72867246 | None:intergenic |
| TATTGAGGAGCTATGTCTGC+AGG | 0.548214 | 5.3:+72867759 | MS.gene47742:CDS |
| GCATCCTTGTAAGATGCAAT+CGG | 0.548739 | 5.3:-72863876 | None:intergenic |
| TCAGAAATTTCATCCTTCGC+GGG | 0.550635 | 5.3:-72865554 | None:intergenic |
| AGATACTTTGCACTCAGCCT+CGG | 0.550947 | 5.3:+72864486 | MS.gene47742:CDS |
| ATTCTCGGAAGAGTCAAAAC+GGG | 0.554446 | 5.3:+72863465 | MS.gene47742:CDS |
| GGTTCGAAAAGCCAATAAGA+AGG | 0.558093 | 5.3:+72863402 | MS.gene47742:CDS |
| TGGGAAGGAGAGGAGATTGT+CGG | 0.558526 | 5.3:+72863381 | MS.gene47742:CDS |
| TTTCAGCGAGATTGGTTGAG+AGG | 0.559075 | 5.3:-72867498 | None:intergenic |
| ATATAATCCAAAATATATTG+TGG | 0.559439 | 5.3:-72864440 | None:intergenic |
| ACTCAAGAGAATGCCTATTG+AGG | 0.559740 | 5.3:+72867744 | MS.gene47742:CDS |
| AGTACCGGATAAGTGAAGCC+TGG | 0.560241 | 5.3:-72866681 | None:intergenic |
| GAAAGAATCTCTAGAGAGAG+AGG | 0.563993 | 5.3:+72864621 | MS.gene47742:CDS |
| CTGCGCTAGAGATTGCTGAA+AGG | 0.565244 | 5.3:+72867125 | MS.gene47742:CDS |
| GCGAGTGCGAAGCAACGAGA+AGG | 0.569473 | 5.3:+72867634 | MS.gene47742:CDS |
| TGTGTAGGACTGGGAAGGAG+AGG | 0.570622 | 5.3:+72863371 | MS.gene47742:intron |
| AGCCTGGAACTTGGATAACT+GGG | 0.571228 | 5.3:-72866665 | None:intergenic |
| CAAATTAATAGCTTCATCAA+AGG | 0.573829 | 5.3:-72866906 | None:intergenic |
| GACTGTATCTGACTTGAAAG+AGG | 0.575980 | 5.3:+72863666 | MS.gene47742:CDS |
| GGAAGCTGTAACTTCTAGAA+GGG | 0.577224 | 5.3:+72863642 | MS.gene47742:CDS |
| GGCTTGGTCTAATGATGAGT+GGG | 0.578337 | 5.3:+72866928 | MS.gene47742:CDS |
| GTAAAATCAAGCAATGATGA+TGG | 0.581090 | 5.3:+72866827 | MS.gene47742:CDS |
| GTTTGTTGGAATACTAAATG+TGG | 0.584665 | 5.3:-72866852 | None:intergenic |
| ATCAGCAGTTGAATCTCACC+AGG | 0.588388 | 5.3:+72863905 | MS.gene47742:CDS |
| TTTGGAGGATGTACTTTCTG+CGG | 0.588477 | 5.3:+72866805 | MS.gene47742:CDS |
| TGCAATTTAAGGTCCAAAGA+CGG | 0.588850 | 5.3:+72867097 | MS.gene47742:CDS |
| CCGATATTCAGACTTCATGT+TGG | 0.589369 | 5.3:+72865911 | MS.gene47742:CDS |
| GCTACCGATTGCATCTTACA+AGG | 0.590410 | 5.3:+72863872 | MS.gene47742:CDS |
| ACTTCATGTTGGCAATAATG+AGG | 0.594931 | 5.3:+72865922 | MS.gene47742:CDS |
| GTATAGCTAACGCAAGACAT+AGG | 0.595255 | 5.3:+72863563 | MS.gene47742:CDS |
| GAGGCTGCTGGAGAAAATGT+TGG | 0.595937 | 5.3:+72864645 | MS.gene47742:CDS |
| ATATCTGGTGAGACTGGCTG+TGG | 0.596856 | 5.3:+72864161 | MS.gene47742:CDS |
| TCTTCCGAGAATGTGAAATG+AGG | 0.601540 | 5.3:-72863454 | None:intergenic |
| CGAAAAGCCAATAAGAAGGG+TGG | 0.602258 | 5.3:+72863406 | MS.gene47742:CDS |
| ATAGTGTACGTCATAGACAC+TGG | 0.604873 | 5.3:+72867541 | MS.gene47742:CDS |
| TGGTTTCTAAGGGTTCTCGT+CGG | 0.608074 | 5.3:+72865519 | MS.gene47742:CDS |
| AACAAATTCCAGGTTGACAA+CGG | 0.612420 | 5.3:-72867666 | None:intergenic |
| CAGATACGCTTAGATAGCAA+AGG | 0.615701 | 5.3:+72865443 | MS.gene47742:intron |
| AAGAAACCAATTCTGACAGT+AGG | 0.616932 | 5.3:-72866952 | None:intergenic |
| ATAATAAAGAAACACATGGA+TGG | 0.620086 | 5.3:+72867172 | MS.gene47742:CDS |
| GAAAAGCCAATAAGAAGGGT+GGG | 0.636827 | 5.3:+72863407 | MS.gene47742:CDS |
| CGAGTGCGAAGCAACGAGAA+GGG | 0.637775 | 5.3:+72867635 | MS.gene47742:CDS |
| TGACAAAAGATGAAATTACT+CGG | 0.639079 | 5.3:+72863614 | MS.gene47742:CDS |
| GGAAACTTGAAGGATCTGGT+TGG | 0.640249 | 5.3:+72863526 | MS.gene47742:CDS |
| GTCAATGAAGAATCCCGCGA+AGG | 0.649567 | 5.3:+72865541 | MS.gene47742:CDS |
| ATACGCTTAGATAGCAAAGG+TGG | 0.651068 | 5.3:+72865446 | MS.gene47742:CDS |
| CCAATAAATGTGCAAAACGA+CGG | 0.652431 | 5.3:-72863214 | None:intergenic |
| GTTCGAAAAGCCAATAAGAA+GGG | 0.653407 | 5.3:+72863403 | MS.gene47742:CDS |
| TGTACTGATTCAAAAGATGG+AGG | 0.653979 | 5.3:+72867298 | MS.gene47742:CDS |
| CTGATAATTGAAGAGTTCTG+GGG | 0.658035 | 5.3:-72866984 | None:intergenic |
| TGGCTTGGTCTAATGATGAG+TGG | 0.659097 | 5.3:+72866927 | MS.gene47742:CDS |
| TAACTGACCAGACGTAGATG+AGG | 0.661853 | 5.3:-72866450 | None:intergenic |
| AATCTCTAGAGAGAGAGGTG+AGG | 0.664499 | 5.3:+72864626 | MS.gene47742:CDS |
| TGAAATAATAAAGAAACACA+TGG | 0.667441 | 5.3:+72867168 | MS.gene47742:CDS |
| TAGTGTACGTCATAGACACT+GGG | 0.675625 | 5.3:+72867542 | MS.gene47742:CDS |
| TGCCGGAAGAGGTAGAATTG+GGG | 0.677012 | 5.3:+72867042 | MS.gene47742:CDS |
| TTCAAGTTTCCATCACCAGG+TGG | 0.683429 | 5.3:-72863514 | None:intergenic |
| TGGCTGTGGAAAGACTACTC+AGG | 0.708313 | 5.3:+72864175 | MS.gene47742:CDS |
| GACATTGCAGAGATACGCCG+AGG | 0.717734 | 5.3:-72864503 | None:intergenic |
| GATCTGGTTGGAGAAAAGAG+TGG | 0.731307 | 5.3:+72863538 | MS.gene47742:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGACTTAATTATTATTA+AGG | + | chr5.3:72865254-72865273 | MS.gene47742:intron | 10.0% |
| !! | TTAATAATAATTAAGTCATA+TGG | - | chr5.3:72865255-72865274 | None:intergenic | 10.0% |
| !!! | ATTGTTTATTTTTAAGTTAT+AGG | - | chr5.3:72865422-72865441 | None:intergenic | 10.0% |
| !! | AACAGAAAAAAAAAATCTTT+CGG | - | chr5.3:72866337-72866356 | None:intergenic | 15.0% |
| !! | ATATAATCCAAAATATATTG+TGG | - | chr5.3:72864443-72864462 | None:intergenic | 15.0% |
| !! | TATAATCCAAAATATATTGT+GGG | - | chr5.3:72864442-72864461 | None:intergenic | 15.0% |
| !! | TCATGTATTAGTAAAAATAA+GGG | + | chr5.3:72865305-72865324 | MS.gene47742:intron | 15.0% |
| !!! | AATATATTTTGGATTATATG+TGG | + | chr5.3:72864444-72864463 | MS.gene47742:CDS | 15.0% |
| !!! | ATATATTTTGGATTATATGT+GGG | + | chr5.3:72864445-72864464 | MS.gene47742:CDS | 15.0% |
| !!! | ATCTAATAGCATAATTTTTA+GGG | + | chr5.3:72866079-72866098 | MS.gene47742:intron | 15.0% |
| !!! | CTTTCTTTATTTTTACTTTT+TGG | + | chr5.3:72866158-72866177 | MS.gene47742:intron | 15.0% |
| !!! | TTAATATTAATTACTGATTC+AGG | + | chr5.3:72864415-72864434 | MS.gene47742:intron | 15.0% |
| !!! | TTATTATAATTTGTTGCTAA+CGG | + | chr5.3:72864247-72864266 | MS.gene47742:intron | 15.0% |
| !!! | TTTATTTTTACTTTTTGGAT+AGG | + | chr5.3:72866163-72866182 | MS.gene47742:intron | 15.0% |
| !! | AAATAAACATACTACAGAAA+AGG | - | chr5.3:72863772-72863791 | None:intergenic | 20.0% |
| !! | AAGACTTTGAATAATGATTA+TGG | - | chr5.3:72865368-72865387 | None:intergenic | 20.0% |
| !! | AAGTGAAATTTGTGAATATT+AGG | + | chr5.3:72867846-72867865 | MS.gene47742:CDS | 20.0% |
| !! | AATAAACATACTACAGAAAA+GGG | - | chr5.3:72863771-72863790 | None:intergenic | 20.0% |
| !! | AATTATAATAAATGACGTTG+TGG | - | chr5.3:72864238-72864257 | None:intergenic | 20.0% |
| !! | AGATATGTATTGTAAAAATG+AGG | + | chr5.3:72865847-72865866 | MS.gene47742:intron | 20.0% |
| !! | ATAGGATATATCAGATAAAA+GGG | - | chr5.3:72865404-72865423 | None:intergenic | 20.0% |
| !! | ATATGATTTGAAAAAGAACT+TGG | - | chr5.3:72866523-72866542 | None:intergenic | 20.0% |
| !! | CAAAAAAATTCATATACACA+AGG | - | chr5.3:72863726-72863745 | None:intergenic | 20.0% |
| !! | CAAAAACTGTCAAAAAATAT+AGG | - | chr5.3:72864362-72864381 | None:intergenic | 20.0% |
| !! | GTCATGTATTAGTAAAAATA+AGG | + | chr5.3:72865304-72865323 | MS.gene47742:intron | 20.0% |
| !! | GTTAAAATATAAGCTGAAAT+GGG | - | chr5.3:72866557-72866576 | None:intergenic | 20.0% |
| !! | TAATAGAAAGTAATGAACAA+AGG | - | chr5.3:72864719-72864738 | None:intergenic | 20.0% |
| !! | TAATGAGGTATAAATTTGAA+AGG | + | chr5.3:72865937-72865956 | MS.gene47742:intron | 20.0% |
| !! | TATAGGATATATCAGATAAA+AGG | - | chr5.3:72865405-72865424 | None:intergenic | 20.0% |
| !! | TATGATTTGAAAAAGAACTT+GGG | - | chr5.3:72866522-72866541 | None:intergenic | 20.0% |
| !! | TATTAGATGCAAATTATCTT+TGG | - | chr5.3:72866067-72866086 | None:intergenic | 20.0% |
| !! | TTAAAAGTTAAAACTCTTCA+AGG | + | chr5.3:72866242-72866261 | MS.gene47742:intron | 20.0% |
| !! | TTAAGTTATTGAATGTTGAA+GGG | - | chr5.3:72865027-72865046 | None:intergenic | 20.0% |
| !!! | AATTTCATCTTTTGTCATTA+CGG | - | chr5.3:72863611-72863630 | None:intergenic | 20.0% |
| !!! | AGTTTTAACTTTTAAACAAG+TGG | - | chr5.3:72866237-72866256 | None:intergenic | 20.0% |
| !!! | CACTTTTTTTATTGATATGT+TGG | + | chr5.3:72864869-72864888 | MS.gene47742:intron | 20.0% |
| !!! | CATCTAATAGCATAATTTTT+AGG | + | chr5.3:72866078-72866097 | MS.gene47742:intron | 20.0% |
| !!! | CATTGACATTTTAAATATGT+TGG | + | chr5.3:72864023-72864042 | MS.gene47742:intron | 20.0% |
| !!! | CTTGTGTATATGAATTTTTT+TGG | + | chr5.3:72863724-72863743 | MS.gene47742:intron | 20.0% |
| !!! | TATATTTTGGATTATATGTG+GGG | + | chr5.3:72864446-72864465 | MS.gene47742:CDS | 20.0% |
| ! | AAAAAAAAAATCTTTCGGAG+GGG | - | chr5.3:72866332-72866351 | None:intergenic | 25.0% |
| ! | AAAACAACATCAACTATTTC+GGG | - | chr5.3:72867253-72867272 | None:intergenic | 25.0% |
| ! | AATTATCAGCATTCTTTAAC+TGG | + | chr5.3:72866998-72867017 | MS.gene47742:CDS | 25.0% |
| ! | AGAAAAAAAAAATCTTTCGG+AGG | - | chr5.3:72866334-72866353 | None:intergenic | 25.0% |
| ! | AGAGTTGACACATTATTATA+AGG | - | chr5.3:72867592-72867611 | None:intergenic | 25.0% |
| ! | ATAAACATACTACAGAAAAG+GGG | - | chr5.3:72863770-72863789 | None:intergenic | 25.0% |
| ! | ATCATGTGATTGCAAAAAAT+TGG | - | chr5.3:72864835-72864854 | None:intergenic | 25.0% |
| ! | CAAAACAACATCAACTATTT+CGG | - | chr5.3:72867254-72867273 | None:intergenic | 25.0% |
| ! | CAAATTAATAGCTTCATCAA+AGG | - | chr5.3:72866909-72866928 | None:intergenic | 25.0% |
| ! | CAATTCTTCAATGGAATAAT+TGG | + | chr5.3:72863285-72863304 | MS.gene47742:intron | 25.0% |
| ! | CTTTGATGAAGCTATTAATT+TGG | + | chr5.3:72866907-72866926 | MS.gene47742:CDS | 25.0% |
| ! | GAAAAAAAAAATCTTTCGGA+GGG | - | chr5.3:72866333-72866352 | None:intergenic | 25.0% |
| ! | GGTTAAAATATAAGCTGAAA+TGG | - | chr5.3:72866558-72866577 | None:intergenic | 25.0% |
| ! | GGTTTAAGTCTAAAAGTTAT+GGG | + | chr5.3:72863249-72863268 | MS.gene47742:CDS | 25.0% |
| ! | GTTAAGTTATTGAATGTTGA+AGG | - | chr5.3:72865028-72865047 | None:intergenic | 25.0% |
| ! | TAAAAGAAAGAAATGAGATG+AGG | - | chr5.3:72864984-72865003 | None:intergenic | 25.0% |
| ! | TACAAATGATAACAAATTCC+AGG | - | chr5.3:72867679-72867698 | None:intergenic | 25.0% |
| ! | TGACAAAAGATGAAATTACT+CGG | + | chr5.3:72863614-72863633 | MS.gene47742:CDS | 25.0% |
| ! | TTCAATGGAATAATTGGTAA+AGG | + | chr5.3:72863291-72863310 | MS.gene47742:intron | 25.0% |
| ! | TTGATTGTCAATAAATCACA+AGG | + | chr5.3:72864795-72864814 | MS.gene47742:intron | 25.0% |
| ! | TTTACAATACATATCTTGCA+AGG | - | chr5.3:72865843-72865862 | None:intergenic | 25.0% |
| !! | AAGTGATTATGTTAGTTTCT+AGG | + | chr5.3:72866197-72866216 | MS.gene47742:intron | 25.0% |
| !! | ATTTCATCTTTTGTCATTAC+GGG | - | chr5.3:72863610-72863629 | None:intergenic | 25.0% |
| !! | CAAGATTTAGTTTAACTCAA+TGG | + | chr5.3:72866124-72866143 | MS.gene47742:intron | 25.0% |
| !! | CGAGATTTTCTCAATATTTT+GGG | + | chr5.3:72866637-72866656 | MS.gene47742:CDS | 25.0% |
| !! | GAGATTTTCTCAATATTTTG+GGG | + | chr5.3:72866638-72866657 | MS.gene47742:CDS | 25.0% |
| !! | GATATGATCACAAATTTTGA+TGG | - | chr5.3:72867403-72867422 | None:intergenic | 25.0% |
| !! | TTTTAACCTTATCTGTTTTC+TGG | + | chr5.3:72866570-72866589 | MS.gene47742:intron | 25.0% |
| !!! | AGATTTTCTCAATATTTTGG+GGG | + | chr5.3:72866639-72866658 | MS.gene47742:CDS | 25.0% |
| !!! | ATATGTACTGATTCAAAAGA+TGG | + | chr5.3:72867295-72867314 | MS.gene47742:CDS | 25.0% |
| !!! | TATTTGCTATTTCTTTCTTC+AGG | + | chr5.3:72866769-72866788 | MS.gene47742:intron | 25.0% |
| !!! | TGATGGATTATTGAAAAAAG+AGG | - | chr5.3:72867386-72867405 | None:intergenic | 25.0% |
| AAAAAAAAATCTTTCGGAGG+GGG | - | chr5.3:72866331-72866350 | None:intergenic | 30.0% | |
| AAAATTGTGAATTGAGTCGT+TGG | - | chr5.3:72864947-72864966 | None:intergenic | 30.0% | |
| ACACGTGAGAATTATATGAA+AGG | - | chr5.3:72865130-72865149 | None:intergenic | 30.0% | |
| ACATTTATTGGCCCAAAAAA+TGG | + | chr5.3:72863226-72863245 | MS.gene47742:CDS | 30.0% | |
| ACCATGTGGATAAATTTCAA+AGG | - | chr5.3:72863960-72863979 | None:intergenic | 30.0% | |
| ACTCCAGATCCTAATTAAAT+AGG | - | chr5.3:72865286-72865305 | None:intergenic | 30.0% | |
| AGATGAAATTACTCGGAAAT+TGG | + | chr5.3:72863621-72863640 | MS.gene47742:CDS | 30.0% | |
| AGCAAAAGAAAACATTAACC+TGG | - | chr5.3:72863926-72863945 | None:intergenic | 30.0% | |
| AGGTCTTTCCCTATTTAATT+AGG | + | chr5.3:72865274-72865293 | MS.gene47742:intron | 30.0% | |
| ATAGGTCCATATACAATGAT+GGG | - | chr5.3:72864344-72864363 | None:intergenic | 30.0% | |
| ATTTATTGGCCCAAAAAATG+GGG | + | chr5.3:72863228-72863247 | MS.gene47742:CDS | 30.0% | |
| CAATTTCAACACTTGAAGAT+TGG | + | chr5.3:72864078-72864097 | MS.gene47742:intron | 30.0% | |
| CATTCTATGTTCAAGAATCT+TGG | + | chr5.3:72865792-72865811 | MS.gene47742:intron | 30.0% | |
| CATTTATTGGCCCAAAAAAT+GGG | + | chr5.3:72863227-72863246 | MS.gene47742:CDS | 30.0% | |
| CTCCAGATCCTAATTAAATA+GGG | - | chr5.3:72865285-72865304 | None:intergenic | 30.0% | |
| CTTATCATGTGATTGTTTGT+TGG | - | chr5.3:72866869-72866888 | None:intergenic | 30.0% | |
| GCATAAGCAAGCATAAAATT+GGG | + | chr5.3:72866024-72866043 | MS.gene47742:intron | 30.0% | |
| GGGTTTAAGTCTAAAAGTTA+TGG | + | chr5.3:72863248-72863267 | MS.gene47742:CDS | 30.0% | |
| GTAAAATCAAGCAATGATGA+TGG | + | chr5.3:72866827-72866846 | MS.gene47742:CDS | 30.0% | |
| TAATTGCTGTCACAAAATCT+TGG | + | chr5.3:72867795-72867814 | MS.gene47742:CDS | 30.0% | |
| TACTACTGGAGTTCTATTAA+GGG | + | chr5.3:72865493-72865512 | MS.gene47742:CDS | 30.0% | |
| TATAGGTCCATATACAATGA+TGG | - | chr5.3:72864345-72864364 | None:intergenic | 30.0% | |
| TCAATCTACTCTATAAGTAC+CGG | - | chr5.3:72866699-72866718 | None:intergenic | 30.0% | |
| TCAGAAACTAGACATAGAAT+GGG | - | chr5.3:72864603-72864622 | None:intergenic | 30.0% | |
| TCAGGATGAAATTCATGAAA+GGG | + | chr5.3:72865887-72865906 | MS.gene47742:intron | 30.0% | |
| TCAGGTCAAAACATACTATT+TGG | + | chr5.3:72866787-72866806 | MS.gene47742:intron | 30.0% | |
| TCTATTGTTCTATGTACTAC+TGG | + | chr5.3:72865479-72865498 | MS.gene47742:CDS | 30.0% | |
| TGCATAAGCAAGCATAAAAT+TGG | + | chr5.3:72866023-72866042 | MS.gene47742:intron | 30.0% | |
| TTCAGAAACTAGACATAGAA+TGG | - | chr5.3:72864604-72864623 | None:intergenic | 30.0% | |
| TTCAGGATGAAATTCATGAA+AGG | + | chr5.3:72865886-72865905 | MS.gene47742:intron | 30.0% | |
| TTCATGTTAAATCATCTCAC+AGG | + | chr5.3:72865190-72865209 | MS.gene47742:intron | 30.0% | |
| TTCCCTATTTAATTAGGATC+TGG | + | chr5.3:72865280-72865299 | MS.gene47742:intron | 30.0% | |
| TTTATTATTTCAGCAGCTTC+TGG | - | chr5.3:72867160-72867179 | None:intergenic | 30.0% | |
| ! | AACTTTTAAACAAGTGGTTG+AGG | - | chr5.3:72866231-72866250 | None:intergenic | 30.0% |
| ! | ACTTTTAAACAAGTGGTTGA+GGG | - | chr5.3:72866230-72866249 | None:intergenic | 30.0% |
| ! | ATGAAGCTATTAATTTGGCT+TGG | + | chr5.3:72866912-72866931 | MS.gene47742:CDS | 30.0% |
| ! | GCGAGATTTTCTCAATATTT+TGG | + | chr5.3:72866636-72866655 | MS.gene47742:CDS | 30.0% |
| ! | GTTTGTTGGAATACTAAATG+TGG | - | chr5.3:72866855-72866874 | None:intergenic | 30.0% |
| ! | TTTAGTTTAACTCAATGGCA+TGG | + | chr5.3:72866129-72866148 | MS.gene47742:intron | 30.0% |
| ! | TTTTATGCTTGCTTATGCAA+CGG | - | chr5.3:72866022-72866041 | None:intergenic | 30.0% |
| !! | CAATCTTCAAGTGTTGAAAT+TGG | - | chr5.3:72864080-72864099 | None:intergenic | 30.0% |
| !! | TGATGTTTTTATCCAGCTTT+GGG | + | chr5.3:72864301-72864320 | MS.gene47742:intron | 30.0% |
| !! | TTGATGTTTTTATCCAGCTT+TGG | + | chr5.3:72864300-72864319 | MS.gene47742:intron | 30.0% |
| !!! | AGACTTAAACCCCATTTTTT+GGG | - | chr5.3:72863240-72863259 | None:intergenic | 30.0% |
| !!! | CATAATTTTTAGGGTAGAGT+TGG | + | chr5.3:72866088-72866107 | MS.gene47742:intron | 30.0% |
| !!! | CCTTGTTTTTTTTTCAGGAT+GGG | + | chr5.3:72867324-72867343 | MS.gene47742:CDS | 30.0% |
| !!! | TAGACTTAAACCCCATTTTT+TGG | - | chr5.3:72863241-72863260 | None:intergenic | 30.0% |
| !!! | TCCTTGTTTTTTTTTCAGGA+TGG | + | chr5.3:72867323-72867342 | MS.gene47742:CDS | 30.0% |
| AAAAAAAATCTTTCGGAGGG+GGG | - | chr5.3:72866330-72866349 | None:intergenic | 35.0% | |
| AACACACCAGAAAACAGATA+AGG | - | chr5.3:72866579-72866598 | None:intergenic | 35.0% | |
| AAGAAACCAATTCTGACAGT+AGG | - | chr5.3:72866955-72866974 | None:intergenic | 35.0% | |
| AATGAGATGAGGAAGAGAAA+AGG | - | chr5.3:72864973-72864992 | None:intergenic | 35.0% | |
| AATTTATCCACATGGTAGCT+TGG | + | chr5.3:72863964-72863983 | MS.gene47742:intron | 35.0% | |
| ACTTCATGTTGGCAATAATG+AGG | + | chr5.3:72865922-72865941 | MS.gene47742:CDS | 35.0% | |
| AGAAAATCTCGCAGTATCAA+TGG | - | chr5.3:72866628-72866647 | None:intergenic | 35.0% | |
| AGACGTAGATGAGGATATAA+AGG | - | chr5.3:72866444-72866463 | None:intergenic | 35.0% | |
| AGTACTCCCATCATTGTATA+TGG | + | chr5.3:72864335-72864354 | MS.gene47742:intron | 35.0% | |
| CCAACATGAAGTCTGAATAT+CGG | - | chr5.3:72865914-72865933 | None:intergenic | 35.0% | |
| CCAATAAATGTGCAAAACGA+CGG | - | chr5.3:72863217-72863236 | None:intergenic | 35.0% | |
| CCCATCCTGAAAAAAAAACA+AGG | - | chr5.3:72867327-72867346 | None:intergenic | 35.0% | |
| CTGATAATTGAAGAGTTCTG+GGG | - | chr5.3:72866987-72867006 | None:intergenic | 35.0% | |
| GACGTACACTATATCATCAA+TGG | - | chr5.3:72867533-72867552 | None:intergenic | 35.0% | |
| GACGTAGATGAGGATATAAA+GGG | - | chr5.3:72866443-72866462 | None:intergenic | 35.0% | |
| GATCATATCTCTGCATTCAA+TGG | + | chr5.3:72867414-72867433 | MS.gene47742:CDS | 35.0% | |
| GCTGATAATTGAAGAGTTCT+GGG | - | chr5.3:72866988-72867007 | None:intergenic | 35.0% | |
| GGTCAAAACATACTATTTGG+AGG | + | chr5.3:72866790-72866809 | MS.gene47742:intron | 35.0% | |
| GTAAGCTATTGTATCCATGT+AGG | - | chr5.3:72866292-72866311 | None:intergenic | 35.0% | |
| GTACTACTGGAGTTCTATTA+AGG | + | chr5.3:72865492-72865511 | MS.gene47742:CDS | 35.0% | |
| GTCAAACAGAATGTTTCACA+TGG | - | chr5.3:72864389-72864408 | None:intergenic | 35.0% | |
| GTGACATTCATTTCTTGTTC+AGG | + | chr5.3:72865869-72865888 | MS.gene47742:intron | 35.0% | |
| GTTCGAAAAGCCAATAAGAA+GGG | + | chr5.3:72863403-72863422 | MS.gene47742:CDS | 35.0% | |
| TCTTCCTCATTTCACATTCT+CGG | + | chr5.3:72863450-72863469 | MS.gene47742:CDS | 35.0% | |
| TGAACAGCACAATTCTTCAA+TGG | + | chr5.3:72863276-72863295 | MS.gene47742:intron | 35.0% | |
| TGACATCACTCACATCATTA+TGG | + | chr5.3:72865574-72865593 | MS.gene47742:CDS | 35.0% | |
| TGCTGATAATTGAAGAGTTC+TGG | - | chr5.3:72866989-72867008 | None:intergenic | 35.0% | |
| TGGAGAAAATGTTGGATACA+AGG | + | chr5.3:72864653-72864672 | MS.gene47742:CDS | 35.0% | |
| TGGTAAAGGAAGAATGTGTT+TGG | + | chr5.3:72863305-72863324 | MS.gene47742:intron | 35.0% | |
| TGTCAACTCTTCAATCATCT+TGG | + | chr5.3:72867602-72867621 | MS.gene47742:CDS | 35.0% | |
| TTCTGGTGTGTTCTAATGTT+AGG | + | chr5.3:72866587-72866606 | MS.gene47742:intron | 35.0% | |
| TTGGATTATATGTGGGGTAA+GGG | + | chr5.3:72864452-72864471 | MS.gene47742:CDS | 35.0% | |
| TTGTGAGATCATTCGTCTTA+AGG | + | chr5.3:72866355-72866374 | MS.gene47742:intron | 35.0% | |
| TTTATATCCTCATCTACGTC+TGG | + | chr5.3:72866443-72866462 | MS.gene47742:CDS | 35.0% | |
| TTTATGCTTGCTTATGCAAC+GGG | - | chr5.3:72866021-72866040 | None:intergenic | 35.0% | |
| TTTGCGTTTCTTTGTAGCAA+TGG | + | chr5.3:72864684-72864703 | MS.gene47742:intron | 35.0% | |
| TTTGGATTATATGTGGGGTA+AGG | + | chr5.3:72864451-72864470 | MS.gene47742:CDS | 35.0% | |
| ! | AAAAACCTTCTTTTGCTCCA+AGG | - | chr5.3:72867446-72867465 | None:intergenic | 35.0% |
| ! | AACAAATTCCAGGTTGACAA+CGG | - | chr5.3:72867669-72867688 | None:intergenic | 35.0% |
| ! | ATGTGCATGCTCTTATCTTT+TGG | + | chr5.3:72867067-72867086 | MS.gene47742:CDS | 35.0% |
| ! | TCAGCTTTTACTTTCTACTG+TGG | + | chr5.3:72865966-72865985 | MS.gene47742:intron | 35.0% |
| ! | TCAGGTCCCACAATATATTT+TGG | + | chr5.3:72864433-72864452 | MS.gene47742:intron | 35.0% |
| ! | TGCAATTTAAGGTCCAAAGA+CGG | + | chr5.3:72867097-72867116 | MS.gene47742:CDS | 35.0% |
| ! | TTATTTGCTCATTTTCCACC+TGG | + | chr5.3:72863499-72863518 | MS.gene47742:CDS | 35.0% |
| !! | ACAAGGTCTTTGAAGTTGAA+TGG | - | chr5.3:72863709-72863728 | None:intergenic | 35.0% |
| !! | ATTAAGGGTGTTGGTTTCTA+AGG | + | chr5.3:72865508-72865527 | MS.gene47742:CDS | 35.0% |
| !! | GCCTTTGAAATTTATCCACA+TGG | + | chr5.3:72863956-72863975 | MS.gene47742:intron | 35.0% |
| !! | TCTTTGAAGTTGAATGGAGA+GGG | - | chr5.3:72863703-72863722 | None:intergenic | 35.0% |
| !! | TGTACTGATTCAAAAGATGG+AGG | + | chr5.3:72867298-72867317 | MS.gene47742:CDS | 35.0% |
| !! | TTAAGGGTGTTGGTTTCTAA+GGG | + | chr5.3:72865509-72865528 | MS.gene47742:CDS | 35.0% |
| !!! | GGCATCCTTGTTTTTTTTTC+AGG | + | chr5.3:72867319-72867338 | MS.gene47742:CDS | 35.0% |
| AAAAAAATCTTTCGGAGGGG+GGG | - | chr5.3:72866329-72866348 | None:intergenic | 40.0% | |
| AAGCAGGTAGTTCTCATATC+TGG | + | chr5.3:72864146-72864165 | MS.gene47742:intron | 40.0% | |
| ACTCAAGAGAATGCCTATTG+AGG | + | chr5.3:72867744-72867763 | MS.gene47742:CDS | 40.0% | |
| AGGGGGGGATTAAATATAAC+AGG | - | chr5.3:72866314-72866333 | None:intergenic | 40.0% | |
| ATACGCTTAGATAGCAAAGG+TGG | + | chr5.3:72865446-72865465 | MS.gene47742:CDS | 40.0% | |
| ATAGGCATTCTCTTGAGTTC+TGG | - | chr5.3:72867742-72867761 | None:intergenic | 40.0% | |
| ATAGTGTACGTCATAGACAC+TGG | + | chr5.3:72867541-72867560 | MS.gene47742:CDS | 40.0% | |
| ATTCTCGGAAGAGTCAAAAC+GGG | + | chr5.3:72863465-72863484 | MS.gene47742:CDS | 40.0% | |
| CAAACACCATTAACGGTGTA+AGG | - | chr5.3:72867024-72867043 | None:intergenic | 40.0% | |
| CAAGCATAAAATTGGGCTGT+AGG | + | chr5.3:72866031-72866050 | MS.gene47742:intron | 40.0% | |
| CAGATACGCTTAGATAGCAA+AGG | + | chr5.3:72865443-72865462 | MS.gene47742:intron | 40.0% | |
| CATTCTCGGAAGAGTCAAAA+CGG | + | chr5.3:72863464-72863483 | MS.gene47742:CDS | 40.0% | |
| CCGATATTCAGACTTCATGT+TGG | + | chr5.3:72865911-72865930 | MS.gene47742:CDS | 40.0% | |
| CCTTGCATTTGTTTCAAAGC+AGG | + | chr5.3:72864130-72864149 | MS.gene47742:intron | 40.0% | |
| GAAAAGCCAATAAGAAGGGT+GGG | + | chr5.3:72863407-72863426 | MS.gene47742:CDS | 40.0% | |
| GCATCCTTGTAAGATGCAAT+CGG | - | chr5.3:72863879-72863898 | None:intergenic | 40.0% | |
| GGTTCGAAAAGCCAATAAGA+AGG | + | chr5.3:72863402-72863421 | MS.gene47742:CDS | 40.0% | |
| GTATAGCTAACGCAAGACAT+AGG | + | chr5.3:72863563-72863582 | MS.gene47742:CDS | 40.0% | |
| GTCAGAAATTTCATCCTTCG+CGG | - | chr5.3:72865558-72865577 | None:intergenic | 40.0% | |
| TAGTGTACGTCATAGACACT+GGG | + | chr5.3:72867542-72867561 | MS.gene47742:CDS | 40.0% | |
| TCAGAAATTTCATCCTTCGC+GGG | - | chr5.3:72865557-72865576 | None:intergenic | 40.0% | |
| TCTTCCGAGAATGTGAAATG+AGG | - | chr5.3:72863457-72863476 | None:intergenic | 40.0% | |
| TGATGGAAACTTGAAGGATC+TGG | + | chr5.3:72863522-72863541 | MS.gene47742:CDS | 40.0% | |
| TGGAAGCTGTAACTTCTAGA+AGG | + | chr5.3:72863641-72863660 | MS.gene47742:CDS | 40.0% | |
| TGGATTATATGTGGGGTAAG+GGG | + | chr5.3:72864453-72864472 | MS.gene47742:CDS | 40.0% | |
| TTATTTCAGCAGCTTCTGGT+TGG | - | chr5.3:72867156-72867175 | None:intergenic | 40.0% | |
| TTCGTCTTAAGGAGTTTGTC+TGG | + | chr5.3:72866366-72866385 | MS.gene47742:intron | 40.0% | |
| TTGGCGCAGATTGCAATTTA+AGG | + | chr5.3:72867086-72867105 | MS.gene47742:CDS | 40.0% | |
| TTGTATCCATGTAGGTAGCT+TGG | - | chr5.3:72866284-72866303 | None:intergenic | 40.0% | |
| TTTGGAGGATGTACTTTCTG+CGG | + | chr5.3:72866805-72866824 | MS.gene47742:CDS | 40.0% | |
| ! | AATGAACCTGCCTTTTGTGT+AGG | + | chr5.3:72863356-72863375 | MS.gene47742:intron | 40.0% |
| ! | CAACATCAACTATTTCGGGT+TGG | - | chr5.3:72867249-72867268 | None:intergenic | 40.0% |
| ! | GAAAGAATCTCTAGAGAGAG+AGG | + | chr5.3:72864621-72864640 | MS.gene47742:CDS | 40.0% |
| ! | GACTGTATCTGACTTGAAAG+AGG | + | chr5.3:72863666-72863685 | MS.gene47742:CDS | 40.0% |
| ! | GGAAGCTGTAACTTCTAGAA+GGG | + | chr5.3:72863642-72863661 | MS.gene47742:CDS | 40.0% |
| ! | TCAGAATTGGTTTCTTCCGA+AGG | + | chr5.3:72866959-72866978 | MS.gene47742:CDS | 40.0% |
| ! | TGGAGTTCTATTAAGGGTGT+TGG | + | chr5.3:72865499-72865518 | MS.gene47742:CDS | 40.0% |
| ! | TGGTTGAGAGGACAATTTTG+CGG | - | chr5.3:72867489-72867508 | None:intergenic | 40.0% |
| ! | TTTGAAGTTGAATGGAGAGG+GGG | - | chr5.3:72863701-72863720 | None:intergenic | 40.0% |
| !! | ACAATGATGGGAGTACTTGT+GGG | - | chr5.3:72864332-72864351 | None:intergenic | 40.0% |
| !! | AGTTCTGGAGTCTGAAAATC+TGG | - | chr5.3:72867727-72867746 | None:intergenic | 40.0% |
| !! | CCGTCGTTTTGCACATTTAT+TGG | + | chr5.3:72863214-72863233 | MS.gene47742:CDS | 40.0% |
| !! | CCTGCTTTGAAACAAATGCA+AGG | - | chr5.3:72864133-72864152 | None:intergenic | 40.0% |
| !! | CTTTGAAGTTGAATGGAGAG+GGG | - | chr5.3:72863702-72863721 | None:intergenic | 40.0% |
| !! | GTCTTTGAAGTTGAATGGAG+AGG | - | chr5.3:72863704-72863723 | None:intergenic | 40.0% |
| !! | TACAATGATGGGAGTACTTG+TGG | - | chr5.3:72864333-72864352 | None:intergenic | 40.0% |
| AAGCCTGGAACTTGGATAAC+TGG | - | chr5.3:72866669-72866688 | None:intergenic | 45.0% | |
| ACACCGTTAATGGTGTTTGC+CGG | + | chr5.3:72867025-72867044 | MS.gene47742:CDS | 45.0% | |
| AGATACTTTGCACTCAGCCT+CGG | + | chr5.3:72864486-72864505 | MS.gene47742:CDS | 45.0% | |
| AGCCTGGAACTTGGATAACT+GGG | - | chr5.3:72866668-72866687 | None:intergenic | 45.0% | |
| AGTTCCAGGCTTCACTTATC+CGG | + | chr5.3:72866677-72866696 | MS.gene47742:CDS | 45.0% | |
| ATCACTCCCACCCTTCTTAT+TGG | - | chr5.3:72863416-72863435 | None:intergenic | 45.0% | |
| ATCAGCAGTTGAATCTCACC+AGG | + | chr5.3:72863905-72863924 | MS.gene47742:CDS | 45.0% | |
| ATCCATGTAGGTAGCTTGGT+TGG | - | chr5.3:72866280-72866299 | None:intergenic | 45.0% | |
| CGAAAAGCCAATAAGAAGGG+TGG | + | chr5.3:72863406-72863425 | MS.gene47742:CDS | 45.0% | |
| CTTCCGGCAAACACCATTAA+CGG | - | chr5.3:72867031-72867050 | None:intergenic | 45.0% | |
| GAAGAGTCAAAACGGGCAAT+GGG | + | chr5.3:72863472-72863491 | MS.gene47742:CDS | 45.0% | |
| GAAGTGACCAATGCTAGGAA+TGG | - | chr5.3:72865064-72865083 | None:intergenic | 45.0% | |
| GATAAGTGAAGCCTGGAACT+TGG | - | chr5.3:72866677-72866696 | None:intergenic | 45.0% | |
| GATCTGGTTGGAGAAAAGAG+TGG | + | chr5.3:72863538-72863557 | MS.gene47742:CDS | 45.0% | |
| GCAAGTTCCATTCCTAGCAT+TGG | + | chr5.3:72865054-72865073 | MS.gene47742:intron | 45.0% | |
| GCATTCAATGGTTCCAACCT+TGG | + | chr5.3:72867426-72867445 | MS.gene47742:CDS | 45.0% | |
| GGAAACTTGAAGGATCTGGT+TGG | + | chr5.3:72863526-72863545 | MS.gene47742:CDS | 45.0% | |
| GGATTATATGTGGGGTAAGG+GGG | + | chr5.3:72864454-72864473 | MS.gene47742:CDS | 45.0% | |
| GTATCTCTGCAATGTCAGGT+GGG | + | chr5.3:72864510-72864529 | MS.gene47742:intron | 45.0% | |
| GTTCTCATATCTGGTGAGAC+TGG | + | chr5.3:72864155-72864174 | MS.gene47742:CDS | 45.0% | |
| TAACTGACCAGACGTAGATG+AGG | - | chr5.3:72866453-72866472 | None:intergenic | 45.0% | |
| TACCAACCAAGCTACCTACA+TGG | + | chr5.3:72866275-72866294 | MS.gene47742:intron | 45.0% | |
| TATTGAGGAGCTATGTCTGC+AGG | + | chr5.3:72867759-72867778 | MS.gene47742:CDS | 45.0% | |
| TCCAACCTTGGAGCAAAAGA+AGG | + | chr5.3:72867438-72867457 | MS.gene47742:CDS | 45.0% | |
| TCTGTAACCAAGCTACCATG+TGG | - | chr5.3:72863974-72863993 | None:intergenic | 45.0% | |
| TGAATTGAGTCGTTGGCAGT+GGG | - | chr5.3:72864940-72864959 | None:intergenic | 45.0% | |
| TGCAAAACGACGGTCATCAT+TGG | - | chr5.3:72863207-72863226 | None:intergenic | 45.0% | |
| TGCAGACATAGCTCCTCAAT+AGG | - | chr5.3:72867760-72867779 | None:intergenic | 45.0% | |
| TGCGCTAGAGATTGCTGAAA+GGG | + | chr5.3:72867126-72867145 | MS.gene47742:CDS | 45.0% | |
| TTAATGGTGTTTGCCGGAAG+AGG | + | chr5.3:72867031-72867050 | MS.gene47742:CDS | 45.0% | |
| TTCCCCAATTCTACCTCTTC+CGG | - | chr5.3:72867047-72867066 | None:intergenic | 45.0% | |
| TTGAAGTTGAATGGAGAGGG+GGG | - | chr5.3:72863700-72863719 | None:intergenic | 45.0% | |
| TTGCCGGAAGAGGTAGAATT+GGG | + | chr5.3:72867041-72867060 | MS.gene47742:CDS | 45.0% | |
| TTTGCCGGAAGAGGTAGAAT+TGG | + | chr5.3:72867040-72867059 | MS.gene47742:CDS | 45.0% | |
| ! | AATCTCTAGAGAGAGAGGTG+AGG | + | chr5.3:72864626-72864645 | MS.gene47742:CDS | 45.0% |
| ! | ACCTTCTTTTGCTCCAAGGT+TGG | - | chr5.3:72867442-72867461 | None:intergenic | 45.0% |
| ! | GCTACCGATTGCATCTTACA+AGG | + | chr5.3:72863872-72863891 | MS.gene47742:CDS | 45.0% |
| ! | GGCTTGGTCTAATGATGAGT+GGG | + | chr5.3:72866928-72866947 | MS.gene47742:CDS | 45.0% |
| ! | TCCTTCAAGTTTCCATCACC+AGG | - | chr5.3:72863520-72863539 | None:intergenic | 45.0% |
| ! | TGGTTTCTAAGGGTTCTCGT+CGG | + | chr5.3:72865519-72865538 | MS.gene47742:CDS | 45.0% |
| ! | TTCAAGTTTCCATCACCAGG+TGG | - | chr5.3:72863517-72863536 | None:intergenic | 45.0% |
| ! | TTTCAGCGAGATTGGTTGAG+AGG | - | chr5.3:72867501-72867520 | None:intergenic | 45.0% |
| !! | AACTGGCCTTACACCGTTAA+TGG | + | chr5.3:72867015-72867034 | MS.gene47742:CDS | 45.0% |
| !! | ACCTGGTGATGGAAACTTGA+AGG | + | chr5.3:72863516-72863535 | MS.gene47742:CDS | 45.0% |
| !! | TGGCTTGGTCTAATGATGAG+TGG | + | chr5.3:72866927-72866946 | MS.gene47742:CDS | 45.0% |
| CATAGACACTGGGCGAATGA+AGG | + | chr5.3:72867552-72867571 | MS.gene47742:CDS | 50.0% | |
| CCTTCCCAGTCCTACACAAA+AGG | - | chr5.3:72863369-72863388 | None:intergenic | 50.0% | |
| CGTATCTCTGCAATGTCAGG+TGG | + | chr5.3:72864509-72864528 | MS.gene47742:intron | 50.0% | |
| CTGCGCTAGAGATTGCTGAA+AGG | + | chr5.3:72867125-72867144 | MS.gene47742:CDS | 50.0% | |
| GAAGCGAAGTGACCAATGCT+AGG | - | chr5.3:72865069-72865088 | None:intergenic | 50.0% | |
| GAATTGAGTCGTTGGCAGTG+GGG | - | chr5.3:72864939-72864958 | None:intergenic | 50.0% | |
| GAGGCTGCTGGAGAAAATGT+TGG | + | chr5.3:72864645-72864664 | MS.gene47742:CDS | 50.0% | |
| GGAAGAGTCAAAACGGGCAA+TGG | + | chr5.3:72863471-72863490 | MS.gene47742:CDS | 50.0% | |
| GTCAATGAAGAATCCCGCGA+AGG | + | chr5.3:72865541-72865560 | MS.gene47742:CDS | 50.0% | |
| GTGAATTGAGTCGTTGGCAG+TGG | - | chr5.3:72864941-72864960 | None:intergenic | 50.0% | |
| GTGGGACCTACTGTCAGAAT+TGG | + | chr5.3:72866946-72866965 | MS.gene47742:CDS | 50.0% | |
| TAGCGCAGTTGTTCCGTCTT+TGG | - | chr5.3:72867113-72867132 | None:intergenic | 50.0% | |
| TGAAGTTGAATGGAGAGGGG+GGG | - | chr5.3:72863699-72863718 | None:intergenic | 50.0% | |
| TGCCCAGTTATCCAAGTTCC+AGG | + | chr5.3:72866663-72866682 | MS.gene47742:CDS | 50.0% | |
| TGCCGGAAGAGGTAGAATTG+GGG | + | chr5.3:72867042-72867061 | MS.gene47742:CDS | 50.0% | |
| TGGCTGTGGAAAGACTACTC+AGG | + | chr5.3:72864175-72864194 | MS.gene47742:CDS | 50.0% | |
| TGGGAAGGAGAGGAGATTGT+CGG | + | chr5.3:72863381-72863400 | MS.gene47742:CDS | 50.0% | |
| TTGTGGGAGAAACCCAAAGC+TGG | - | chr5.3:72864316-72864335 | None:intergenic | 50.0% | |
| ! | ACCTGCCTTTTGTGTAGGAC+TGG | + | chr5.3:72863361-72863380 | MS.gene47742:intron | 50.0% |
| ! | AGTACCGGATAAGTGAAGCC+TGG | - | chr5.3:72866684-72866703 | None:intergenic | 50.0% |
| ! | ATATCTGGTGAGACTGGCTG+TGG | + | chr5.3:72864161-72864180 | MS.gene47742:CDS | 50.0% |
| ! | CCTGCCTTTTGTGTAGGACT+GGG | + | chr5.3:72863362-72863381 | MS.gene47742:intron | 50.0% |
| ! | CCTTTTGTGTAGGACTGGGA+AGG | + | chr5.3:72863366-72863385 | MS.gene47742:intron | 50.0% |
| ! | GACAGCTGTTTCAGCGAGAT+TGG | - | chr5.3:72867509-72867528 | None:intergenic | 50.0% |
| ! | GCTCATTTTCCACCTGGTGA+TGG | + | chr5.3:72863505-72863524 | MS.gene47742:CDS | 50.0% |
| !! | GAAGAGTTCTGGGGTTCCTT+CGG | - | chr5.3:72866978-72866997 | None:intergenic | 50.0% |
| !! | GTTTTTAAGCGTCCACCTCC+TGG | + | chr5.3:72867460-72867479 | MS.gene47742:CDS | 50.0% |
| ACTCTGCTCTTCTGTCGAGC+TGG | - | chr5.3:72867200-72867219 | None:intergenic | 55.0% | |
| CCCAGTCCTACACAAAAGGC+AGG | - | chr5.3:72863365-72863384 | None:intergenic | 55.0% | |
| CGAGTGCGAAGCAACGAGAA+GGG | + | chr5.3:72867635-72867654 | MS.gene47742:CDS | 55.0% | |
| CGGCGTATCTCTGCAATGTC+AGG | + | chr5.3:72864506-72864525 | MS.gene47742:CDS | 55.0% | |
| GACATTGCAGAGATACGCCG+AGG | - | chr5.3:72864506-72864525 | None:intergenic | 55.0% | |
| TGTGTAGGACTGGGAAGGAG+AGG | + | chr5.3:72863371-72863390 | MS.gene47742:intron | 55.0% | |
| ! | ACAATTTTGCGGCAGCCAGG+AGG | - | chr5.3:72867478-72867497 | None:intergenic | 55.0% |
| ! | AGGACAATTTTGCGGCAGCC+AGG | - | chr5.3:72867481-72867500 | None:intergenic | 55.0% |
| AGAGAGAGAGGTGAGGCTGC+TGG | + | chr5.3:72864633-72864652 | MS.gene47742:CDS | 60.0% | |
| GCGAGTGCGAAGCAACGAGA+AGG | + | chr5.3:72867634-72867653 | MS.gene47742:CDS | 60.0% | |
| ! | AAGCAACGAGAAGGGCGTGC+TGG | + | chr5.3:72867643-72867662 | MS.gene47742:CDS | 60.0% |
| ! | ATTTTGCGGCAGCCAGGAGG+TGG | - | chr5.3:72867475-72867494 | None:intergenic | 60.0% |
| ! | CGTGCTGGCCGTTGTCAACC+TGG | + | chr5.3:72867658-72867677 | MS.gene47742:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 72863180 | 72867867 | 72863180 | ID=MS.gene47742 |
| chr5.3 | mRNA | 72863180 | 72867867 | 72863180 | ID=MS.gene47742.t1;Parent=MS.gene47742 |
| chr5.3 | exon | 72863180 | 72863270 | 72863180 | ID=MS.gene47742.t1.exon1;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72863180 | 72863270 | 72863180 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72863378 | 72863687 | 72863378 | ID=MS.gene47742.t1.exon2;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72863378 | 72863687 | 72863378 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72863852 | 72863926 | 72863852 | ID=MS.gene47742.t1.exon3;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72863852 | 72863926 | 72863852 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72864152 | 72864196 | 72864152 | ID=MS.gene47742.t1.exon4;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72864152 | 72864196 | 72864152 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72864437 | 72864527 | 72864437 | ID=MS.gene47742.t1.exon5;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72864437 | 72864527 | 72864437 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72864616 | 72864674 | 72864616 | ID=MS.gene47742.t1.exon6;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72864616 | 72864674 | 72864616 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72865446 | 72865595 | 72865446 | ID=MS.gene47742.t1.exon7;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72865446 | 72865595 | 72865446 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72865891 | 72865943 | 72865891 | ID=MS.gene47742.t1.exon8;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72865891 | 72865943 | 72865891 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72866431 | 72866464 | 72866431 | ID=MS.gene47742.t1.exon9;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72866431 | 72866464 | 72866431 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72866609 | 72866698 | 72866609 | ID=MS.gene47742.t1.exon10;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72866609 | 72866698 | 72866609 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| chr5.3 | exon | 72866791 | 72867867 | 72866791 | ID=MS.gene47742.t1.exon11;Parent=MS.gene47742.t1 |
| chr5.3 | CDS | 72866791 | 72867867 | 72866791 | ID=cds.MS.gene47742.t1;Parent=MS.gene47742.t1 |
| Gene Sequence |
| Protein sequence |
