AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48340.t1 MTR_4g105130 94.460 361 17 1 1 358 1 361 0.0 690
MS.gene48340.t1 MTR_3g077110 55.670 388 103 15 1 358 1 349 1.94e-119 349
MS.gene48340.t1 MTR_1g112760 62.115 227 55 5 3 225 4 203 1.27e-88 266
MS.gene48340.t1 MTR_7g110830 86.364 132 18 0 1 132 1 132 8.67e-84 259
MS.gene48340.t1 MTR_1g085640 71.856 167 46 1 1 166 1 167 2.43e-82 256
MS.gene48340.t1 MTR_1g085040 80.851 141 27 0 1 141 1 141 1.35e-81 253
MS.gene48340.t1 MTR_7g111290 81.679 131 24 0 1 131 1 131 2.88e-71 227
MS.gene48340.t1 MTR_2g099740 76.800 125 29 0 1 125 1 125 4.14e-67 217
MS.gene48340.t1 MTR_8g017440 75.000 124 31 0 1 124 1 124 1.10e-65 211
MS.gene48340.t1 MTR_8g017540 75.000 124 31 0 1 124 47 170 3.98e-65 211
MS.gene48340.t1 MTR_2g064160 68.889 135 41 1 1 135 1 134 4.45e-65 209
MS.gene48340.t1 MTR_8g017500 72.581 124 34 0 1 124 1 124 1.22e-63 206
MS.gene48340.t1 MTR_8g095390 68.217 129 41 0 1 129 1 129 7.57e-62 201
MS.gene48340.t1 MTR_8g098860 72.269 119 33 0 1 119 1 119 2.42e-61 199
MS.gene48340.t1 MTR_3g097450 57.233 159 55 2 1 152 1 153 1.04e-60 197
MS.gene48340.t1 MTR_8g017340 63.946 147 52 1 1 146 1 147 4.21e-60 201
MS.gene48340.t1 MTR_4g073420 53.704 162 65 1 1 152 1 162 4.59e-60 195
MS.gene48340.t1 MTR_8g017390 75.424 118 28 1 1 117 1 118 5.24e-60 200
MS.gene48340.t1 MTR_5g079670 65.600 125 43 0 3 127 2 126 7.02e-60 192
MS.gene48340.t1 MTR_4g082230 67.188 128 42 0 1 128 1 128 1.05e-59 198
MS.gene48340.t1 MTR_3g074520 64.122 131 47 0 1 131 1 131 1.75e-59 196
MS.gene48340.t1 MTR_4g082290 67.969 128 41 0 1 128 1 128 2.38e-59 197
MS.gene48340.t1 MTR_4g478180 65.625 128 44 0 1 128 2 129 2.43e-59 195
MS.gene48340.t1 MTR_6g012690 60.690 145 57 0 1 145 1 145 3.88e-59 195
MS.gene48340.t1 MTR_7g011170 63.971 136 49 0 1 136 1 136 8.33e-59 192
MS.gene48340.t1 MTR_5g010020 74.545 110 28 0 1 110 1 110 8.73e-59 193
MS.gene48340.t1 MTR_8g017350 63.265 147 53 1 1 146 1 147 1.07e-58 201
MS.gene48340.t1 MTR_5g029840 63.359 131 48 0 1 131 1 131 1.37e-58 193
MS.gene48340.t1 MTR_5g078140 66.154 130 44 0 1 130 1 130 1.51e-57 189
MS.gene48340.t1 MTR_3g065440 63.235 136 50 0 1 136 1 136 2.17e-57 189
MS.gene48340.t1 MTR_6g009430 58.333 132 55 0 1 132 1 132 2.77e-57 189
MS.gene48340.t1 MTR_7g076740 54.023 174 74 3 1 168 1 174 4.42e-57 188
MS.gene48340.t1 MTR_2g089620 64.844 128 45 0 1 128 1 128 5.46e-57 188
MS.gene48340.t1 MTR_2g011660 62.791 129 47 1 1 128 1 129 6.00e-57 189
MS.gene48340.t1 MTR_4g102380 64.341 129 46 0 1 129 1 129 6.21e-57 186
MS.gene48340.t1 MTR_3g461490 60.544 147 54 2 1 147 1 143 8.69e-57 188
MS.gene48340.t1 MTR_2g097910 78.095 105 23 0 12 116 20 124 9.04e-57 187
MS.gene48340.t1 MTR_4g065017 78.302 106 23 0 11 116 16 121 1.10e-56 188
MS.gene48340.t1 MTR_5g007370 67.500 120 39 0 12 131 12 131 1.30e-56 186
MS.gene48340.t1 MTR_4g091490 62.016 129 48 1 1 128 1 129 2.93e-56 187
MS.gene48340.t1 MTR_3g028740 76.852 108 25 0 9 116 19 126 1.18e-55 186
MS.gene48340.t1 MTR_8g031360 62.963 135 48 2 1 133 1 135 2.68e-55 183
MS.gene48340.t1 MTR_7g115650 63.636 121 44 0 1 121 1 121 2.16e-54 178
MS.gene48340.t1 MTR_3g083540 62.903 124 46 0 6 129 35 158 2.99e-54 181
MS.gene48340.t1 MTR_6g055910 72.727 110 30 0 9 118 11 120 1.39e-53 178
MS.gene48340.t1 MTR_4g485530 61.111 126 49 0 1 126 1 126 1.47e-53 175
MS.gene48340.t1 MTR_1g100667 66.129 124 41 1 9 132 10 132 7.15e-53 176
MS.gene48340.t1 MTR_1g100653 64.655 116 41 0 1 116 1 116 2.06e-52 176
MS.gene48340.t1 MTR_7g096930 64.655 116 41 0 1 116 1 116 1.41e-51 173
MS.gene48340.t1 MTR_2g089450 63.559 118 43 0 1 118 1 118 2.10e-51 171
MS.gene48340.t1 MTR_1g076150 65.517 116 40 0 1 116 1 116 9.47e-50 167
MS.gene48340.t1 MTR_1g043050 63.248 117 43 0 1 117 1 117 5.71e-49 165
MS.gene48340.t1 MTR_4g125520 62.069 116 44 0 1 116 1 116 5.94e-49 167
MS.gene48340.t1 MTR_1g043080 62.393 117 44 0 1 117 1 117 1.34e-48 164
MS.gene48340.t1 MTR_0251s0050 61.607 112 43 0 5 116 6 117 1.51e-48 165
MS.gene48340.t1 MTR_1g017000 54.545 132 56 3 1 131 1 129 2.54e-48 164
MS.gene48340.t1 MTR_5g042030 61.538 117 45 0 12 128 7 123 3.78e-48 164
MS.gene48340.t1 MTR_8g027345 59.843 127 49 1 1 125 1 127 6.60e-48 164
MS.gene48340.t1 MTR_4g121460 62.931 116 43 0 1 116 1 116 1.07e-47 164
MS.gene48340.t1 MTR_0008s0390 61.062 113 44 0 5 117 6 118 1.47e-47 162
MS.gene48340.t1 MTR_2g034790 62.069 116 44 0 1 116 1 116 3.78e-47 163
MS.gene48340.t1 MTR_2g089420 63.393 112 41 0 7 118 6 117 4.29e-47 166
MS.gene48340.t1 MTR_2g067420 63.303 109 40 0 2 110 4 112 8.72e-47 162
MS.gene48340.t1 MTR_1g017140 61.017 118 45 1 1 117 1 118 9.07e-47 162
MS.gene48340.t1 MTR_5g014990 61.017 118 45 1 1 117 1 118 9.86e-47 161
MS.gene48340.t1 MTR_4g057635 58.268 127 51 2 1 126 1 126 1.69e-46 161
MS.gene48340.t1 MTR_7g117730 59.664 119 48 0 1 119 1 119 2.26e-46 159
MS.gene48340.t1 MTR_7g010210 60.169 118 47 0 1 118 1 118 2.96e-46 160
MS.gene48340.t1 MTR_7g010210 60.169 118 47 0 1 118 1 118 4.69e-46 158
MS.gene48340.t1 MTR_0008s0470 56.780 118 50 1 1 117 1 118 3.30e-45 157
MS.gene48340.t1 MTR_3g103570 57.627 118 49 1 1 117 1 118 6.12e-45 157
MS.gene48340.t1 MTR_7g087130 55.147 136 56 2 1 134 1 133 6.47e-44 154
MS.gene48340.t1 MTR_0140s0030 54.688 128 52 1 1 122 2 129 7.34e-44 154
MS.gene48340.t1 MTR_0489s0020 54.688 128 52 1 1 122 2 129 7.34e-44 154
MS.gene48340.t1 MTR_2g095520 59.459 111 44 1 1 110 1 111 3.28e-43 152
MS.gene48340.t1 MTR_7g102110 55.085 118 52 1 1 117 1 118 5.79e-43 150
MS.gene48340.t1 MTR_4g097570 60.000 110 43 1 1 109 1 110 1.38e-42 150
MS.gene48340.t1 MTR_8g020490 41.791 201 111 2 10 204 6 206 1.96e-42 148
MS.gene48340.t1 MTR_3g039990 58.475 118 49 0 1 118 2 119 2.02e-42 150
MS.gene48340.t1 MTR_6g090405 55.932 118 51 1 1 117 1 118 3.13e-42 148
MS.gene48340.t1 MTR_7g109320 53.741 147 67 1 1 146 1 147 5.29e-42 150
MS.gene48340.t1 MTR_6g012180 59.091 110 45 0 1 110 1 110 1.47e-41 148
MS.gene48340.t1 MTR_4g100720 60.748 107 42 0 9 115 10 116 2.48e-41 143
MS.gene48340.t1 MTR_7g111290 79.545 88 18 0 44 131 2 89 4.03e-41 147
MS.gene48340.t1 MTR_4g097570 59.459 111 43 2 1 109 1 111 5.59e-41 145
MS.gene48340.t1 MTR_0008s0280 59.434 106 43 0 9 114 9 114 8.76e-41 143
MS.gene48340.t1 MTR_4g128670 56.757 111 47 1 1 110 1 111 1.35e-40 146
MS.gene48340.t1 MTR_0063s0090 46.405 153 75 2 9 157 9 158 4.86e-40 141
MS.gene48340.t1 MTR_1g021230 60.577 104 41 0 12 115 57 160 1.96e-39 145
MS.gene48340.t1 MTR_5g079120 45.638 149 73 3 9 155 58 200 2.68e-39 142
MS.gene48340.t1 MTR_1g073170 56.757 111 48 0 5 115 13 123 3.01e-39 140
MS.gene48340.t1 MTR_3g052430 56.364 110 47 1 12 121 41 149 6.09e-39 145
MS.gene48340.t1 MTR_1g062940 57.273 110 46 1 12 120 6 115 9.64e-39 137
MS.gene48340.t1 MTR_8g042410 58.654 104 43 0 12 115 37 140 1.01e-38 145
MS.gene48340.t1 MTR_7g035075 53.390 118 53 1 1 116 1 118 1.05e-38 137
MS.gene48340.t1 MTR_1g045610 55.357 112 50 0 4 115 13 124 1.28e-38 138
MS.gene48340.t1 MTR_3g052450 55.455 110 48 1 12 121 40 148 1.30e-38 144
MS.gene48340.t1 MTR_6g006030 56.604 106 46 0 11 116 13 118 2.76e-38 136
MS.gene48340.t1 MTR_1g110460 53.571 112 52 0 11 122 25 136 3.38e-38 139
MS.gene48340.t1 MTR_3g045430 48.148 135 69 1 1 134 1 135 9.25e-38 137
MS.gene48340.t1 MTR_3g011610 56.731 104 45 0 12 115 37 140 1.65e-37 141
MS.gene48340.t1 MTR_5g078800 56.604 106 46 0 12 117 7 112 1.85e-37 135
MS.gene48340.t1 MTR_5g079290 48.333 120 62 0 2 121 7 126 1.86e-37 135
MS.gene48340.t1 MTR_5g078910 54.630 108 49 0 10 117 5 112 4.95e-37 135
MS.gene48340.t1 MTR_5g079220 51.327 113 55 0 7 119 16 128 5.48e-37 135
MS.gene48340.t1 MTR_0197s0010 57.000 100 43 0 17 116 6 105 2.72e-36 131
MS.gene48340.t1 MTR_0247s0040 54.902 102 46 0 12 113 7 108 4.48e-36 129
MS.gene48340.t1 MTR_1g086530 53.211 109 47 1 12 120 33 137 4.91e-36 132
MS.gene48340.t1 MTR_0193s0090 39.583 192 102 6 12 195 7 192 5.33e-36 130
MS.gene48340.t1 MTR_1g086510 56.731 104 45 0 12 115 21 124 6.31e-36 131
MS.gene48340.t1 MTR_4g063100 56.311 103 45 0 13 115 8 110 7.67e-36 131
MS.gene48340.t1 MTR_8g060940 56.436 101 44 0 12 112 7 107 1.09e-35 130
MS.gene48340.t1 MTR_5g078860 52.778 108 51 0 12 119 7 114 1.21e-35 132
MS.gene48340.t1 MTR_5g078930 55.340 103 46 0 13 115 10 112 1.69e-35 129
MS.gene48340.t1 MTR_6g055910 75.676 74 18 0 45 118 18 91 4.87e-35 129
MS.gene48340.t1 MTR_0001s0360 50.000 112 56 0 8 119 3 114 5.27e-35 129
MS.gene48340.t1 MTR_7g017260 51.818 110 51 1 12 119 25 134 5.67e-35 129
MS.gene48340.t1 MTR_2g088170 58.654 104 43 0 12 115 29 132 8.94e-35 133
MS.gene48340.t1 MTR_2g096380 50.926 108 53 0 8 115 2 109 1.52e-34 127
MS.gene48340.t1 MTR_5g078950 51.923 104 50 0 10 113 5 108 2.63e-34 127
MS.gene48340.t1 MTR_8g006470 53.271 107 49 1 9 114 7 113 6.00e-34 127
MS.gene48340.t1 MTR_5g062790 42.857 140 78 2 13 151 10 148 3.53e-33 125
MS.gene48340.t1 MTR_1g083630 47.967 123 58 1 11 127 11 133 6.10e-32 127
MS.gene48340.t1 MTR_5g088640 42.105 152 79 4 13 157 13 162 6.88e-32 121
MS.gene48340.t1 MTR_5g088080 50.000 112 54 2 13 123 13 123 7.27e-32 121
MS.gene48340.t1 MTR_5g088150 50.000 112 54 2 13 123 13 123 7.27e-32 121
MS.gene48340.t1 MTR_5g488210 50.000 112 54 2 13 123 13 123 7.27e-32 121
MS.gene48340.t1 MTR_5g488170 50.000 112 54 2 13 123 13 123 1.14e-31 120
MS.gene48340.t1 MTR_4g029540 41.558 154 85 3 12 164 10 159 1.47e-31 120
MS.gene48340.t1 MTR_2g033170 54.369 103 47 0 12 114 24 126 1.89e-31 121
MS.gene48340.t1 MTR_5g007300 63.750 80 29 0 9 88 61 140 3.76e-31 115
MS.gene48340.t1 MTR_4g123040 53.704 108 49 1 12 119 24 130 2.93e-30 117
MS.gene48340.t1 MTR_5g088610 48.214 112 56 2 13 123 10 120 2.19e-28 113
MS.gene48340.t1 MTR_4g063100 60.526 76 30 0 44 119 10 85 2.75e-28 110
MS.gene48340.t1 MTR_4g019370 50.000 102 50 1 14 115 38 138 6.20e-28 112
MS.gene48340.t1 MTR_3g463400 46.154 104 55 1 12 115 131 233 2.16e-27 112
MS.gene48340.t1 MTR_4g094982 52.941 102 47 1 14 115 5 105 2.49e-27 108
MS.gene48340.t1 MTR_5g049190 40.769 130 74 3 9 138 14 140 2.56e-27 108
MS.gene48340.t1 MTR_5g016510 47.500 120 62 1 14 133 5 123 3.47e-27 109
MS.gene48340.t1 MTR_7g061330 45.385 130 65 3 8 132 107 235 1.21e-26 111
MS.gene48340.t1 MTR_7g461410 45.385 130 65 3 8 132 107 235 1.21e-26 111
MS.gene48340.t1 MTR_5g070020 43.269 104 58 1 12 115 120 222 1.45e-26 108
MS.gene48340.t1 MTR_7g061330 45.038 131 66 3 7 132 70 199 1.62e-26 110
MS.gene48340.t1 MTR_4g128190 45.299 117 48 3 12 127 11 112 2.73e-26 105
MS.gene48340.t1 MTR_2g096380 59.722 72 29 0 44 115 19 90 5.20e-26 103
MS.gene48340.t1 MTR_3g077650 33.862 189 116 6 8 191 173 357 1.20e-25 107
MS.gene48340.t1 MTR_3g110028 46.789 109 57 1 8 116 79 186 1.29e-25 108
MS.gene48340.t1 MTR_7g035350 40.458 131 73 3 14 144 225 350 2.74e-25 106
MS.gene48340.t1 MTR_1g085880 49.533 107 52 2 10 114 9 115 2.92e-25 101
MS.gene48340.t1 MTR_7g037260 41.509 106 61 1 14 119 145 249 6.57e-25 104
MS.gene48340.t1 MTR_3g101290 50.000 102 50 1 14 115 37 137 1.23e-24 100
MS.gene48340.t1 MTR_4g105660 41.964 112 62 2 9 119 175 284 1.28e-24 104
MS.gene48340.t1 MTR_1g085770 49.533 107 52 2 10 114 9 115 1.54e-24 102
MS.gene48340.t1 MTR_6g074860 43.564 101 56 1 14 114 4 103 1.93e-24 100
MS.gene48340.t1 MTR_1g026870 44.954 109 59 1 8 116 79 186 2.00e-24 105
MS.gene48340.t1 MTR_1g057980 46.000 100 53 1 12 111 78 176 5.41e-24 100
MS.gene48340.t1 MTR_7g451170 36.765 136 84 2 14 148 191 325 8.50e-24 101
MS.gene48340.t1 MTR_4g088015 40.566 106 62 1 14 119 221 325 1.01e-23 102
MS.gene48340.t1 MTR_6g015455 50.000 102 50 1 14 115 5 105 1.61e-23 102
MS.gene48340.t1 MTR_5g041570 40.367 109 64 1 11 119 131 238 3.56e-23 100
MS.gene48340.t1 MTR_4g082040 41.509 106 61 1 14 119 105 209 5.45e-23 99.8
MS.gene48340.t1 MTR_7g037130 40.000 110 62 2 14 120 145 253 2.49e-22 97.1
MS.gene48340.t1 MTR_3g089045 43.925 107 57 2 14 119 16 120 2.56e-22 95.9
MS.gene48340.t1 MTR_5g082910 48.485 99 50 1 14 112 19 116 4.91e-22 94.7
MS.gene48340.t1 MTR_6g027340 41.748 103 57 2 14 115 16 116 5.06e-22 92.8
MS.gene48340.t1 MTR_8g017480 75.000 52 13 0 1 52 1 52 7.04e-22 87.8
MS.gene48340.t1 MTR_6g027360 44.444 99 52 2 11 108 75 171 1.39e-21 94.0
MS.gene48340.t1 MTR_6g027370 41.176 102 59 1 14 115 99 199 1.16e-20 92.0
MS.gene48340.t1 MTR_0023s0210 49.351 77 39 0 12 88 7 83 2.77e-20 84.3
MS.gene48340.t1 MTR_5g010650 41.837 98 56 1 12 109 108 204 3.67e-20 91.7
MS.gene48340.t1 MTR_7g086960 36.719 128 80 1 14 141 89 215 4.11e-20 90.5
MS.gene48340.t1 MTR_7g450950 34.127 126 79 2 14 136 157 281 6.66e-20 89.7
MS.gene48340.t1 MTR_7g061550 31.210 157 95 4 17 162 10 164 9.39e-19 86.7
MS.gene48340.t1 MTR_6g055910 68.000 50 16 0 69 118 1 50 2.53e-17 80.1
MS.gene48340.t1 MTR_5g038910 35.354 99 63 1 17 115 29 126 9.97e-15 75.1
MS.gene48340.t1 MTR_5g038910 35.354 99 63 1 17 115 29 126 1.20e-14 75.1
MS.gene48340.t1 MTR_8g468380 27.907 172 116 5 17 187 25 189 5.51e-14 73.2
MS.gene48340.t1 MTR_4g063100 55.319 47 21 0 73 119 4 50 3.39e-12 65.1
MS.gene48340.t1 MTR_2g088730 58.537 41 17 0 70 110 34 74 1.91e-11 60.1
MS.gene48340.t1 MTR_2g096380 55.814 43 19 0 73 115 4 46 7.24e-11 60.8
MS.gene48340.t1 MTR_1g008970 37.805 82 51 0 35 116 111 192 8.05e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48340.t1 AT5G26660 73.006 163 44 0 1 163 1 163 3.96e-82 254
MS.gene48340.t1 AT4G01680 85.496 131 19 0 1 131 1 131 1.34e-80 246
MS.gene48340.t1 AT4G01680 81.295 139 26 0 1 139 1 139 8.36e-80 248
MS.gene48340.t1 AT1G57560 69.939 163 44 2 1 163 1 158 4.45e-79 243
MS.gene48340.t1 AT1G57560 78.417 139 29 1 1 139 1 138 8.53e-79 244
MS.gene48340.t1 AT4G01680 74.834 151 26 1 1 139 1 151 3.78e-76 238
MS.gene48340.t1 AT1G09540 79.545 132 27 0 1 132 1 132 9.35e-76 238
MS.gene48340.t1 AT3G12720 72.222 126 34 1 1 126 12 136 1.52e-65 210
MS.gene48340.t1 AT3G13890 78.632 117 25 0 1 117 1 117 1.87e-65 211
MS.gene48340.t1 AT3G13890 73.016 126 25 1 1 117 1 126 3.02e-62 203
MS.gene48340.t1 AT1G63910 55.435 184 73 4 1 182 1 177 4.92e-62 203
MS.gene48340.t1 AT4G34990 58.065 155 64 1 1 154 1 155 1.48e-61 199
MS.gene48340.t1 AT3G02940 63.359 131 48 0 1 131 1 131 1.97e-61 199
MS.gene48340.t1 AT3G61250 62.500 144 54 0 1 144 1 144 3.98e-61 198
MS.gene48340.t1 AT3G02940 63.359 131 48 0 1 131 1 131 4.95e-61 199
MS.gene48340.t1 AT3G02940 63.359 131 48 0 1 131 1 131 4.95e-61 199
MS.gene48340.t1 AT2G16720 53.107 177 74 2 1 171 1 174 2.22e-60 195
MS.gene48340.t1 AT5G16770 63.359 131 48 0 1 131 1 131 2.43e-60 197
MS.gene48340.t1 AT5G16770 63.359 131 48 0 1 131 1 131 2.43e-60 197
MS.gene48340.t1 AT4G38620 59.155 142 58 0 1 142 1 142 2.99e-60 196
MS.gene48340.t1 AT5G16770 63.359 131 48 0 1 131 1 131 6.27e-60 196
MS.gene48340.t1 AT5G16770 63.359 131 48 0 1 131 1 131 6.27e-60 196
MS.gene48340.t1 AT4G12350 63.910 133 48 0 1 133 1 133 4.43e-59 192
MS.gene48340.t1 AT4G05100 64.341 129 45 1 1 128 1 129 5.88e-59 193
MS.gene48340.t1 AT5G15310 64.179 134 48 0 1 134 1 134 5.95e-59 194
MS.gene48340.t1 AT4G21440 64.844 128 45 0 1 128 1 128 6.07e-59 194
MS.gene48340.t1 AT1G22640 56.849 146 60 1 1 143 1 146 6.62e-59 191
MS.gene48340.t1 AT5G15310 64.179 134 48 0 1 134 1 134 7.73e-59 193
MS.gene48340.t1 AT5G15310 64.179 134 48 0 1 134 1 134 9.57e-59 190
MS.gene48340.t1 AT5G56110 60.544 147 54 2 1 147 1 143 3.04e-58 191
MS.gene48340.t1 AT3G01140 66.142 127 43 0 1 127 1 127 3.44e-58 192
MS.gene48340.t1 AT4G09460 61.364 132 51 0 1 132 1 132 8.39e-58 187
MS.gene48340.t1 AT4G22680 59.589 146 59 0 1 146 1 146 8.44e-58 189
MS.gene48340.t1 AT3G13540 48.404 188 92 3 6 191 17 201 3.45e-57 186
MS.gene48340.t1 AT4G28110 61.719 128 49 0 1 128 1 128 4.87e-57 187
MS.gene48340.t1 AT1G66230 59.732 149 57 1 1 146 1 149 5.42e-57 187
MS.gene48340.t1 AT1G34670 60.902 133 52 0 1 133 1 133 5.71e-57 189
MS.gene48340.t1 AT5G16600 59.184 147 60 0 1 147 1 147 7.76e-57 188
MS.gene48340.t1 AT5G10280 60.902 133 52 0 1 133 1 133 9.48e-57 188
MS.gene48340.t1 AT5G65230 62.595 131 49 0 1 131 1 131 2.20e-56 186
MS.gene48340.t1 AT1G74430 62.687 134 50 0 1 134 1 134 1.29e-55 183
MS.gene48340.t1 AT5G12870 75.229 109 27 0 10 118 16 124 1.89e-55 183
MS.gene48340.t1 AT1G18570 58.993 139 56 1 1 138 1 139 1.95e-55 185
MS.gene48340.t1 AT5G61420 58.333 132 55 0 1 132 1 132 2.48e-55 185
MS.gene48340.t1 AT3G01140 66.393 122 41 0 6 127 49 170 3.08e-55 186
MS.gene48340.t1 AT5G54230 63.281 128 47 0 1 128 1 128 3.18e-55 184
MS.gene48340.t1 AT1G35515 59.542 131 53 0 1 131 1 131 3.34e-55 180
MS.gene48340.t1 AT4G17785 61.832 131 49 1 1 130 1 131 4.46e-55 184
MS.gene48340.t1 AT4G17785 61.832 131 49 1 1 130 1 131 4.99e-55 184
MS.gene48340.t1 AT5G60890 58.915 129 53 0 1 129 1 129 1.57e-54 181
MS.gene48340.t1 AT5G07690 59.231 130 53 0 1 130 1 130 1.60e-54 182
MS.gene48340.t1 AT3G08500 75.000 108 27 0 9 116 27 134 8.73e-54 181
MS.gene48340.t1 AT1G74080 58.519 135 56 0 1 135 1 135 1.32e-53 180
MS.gene48340.t1 AT5G14340 58.219 146 53 1 1 146 13 150 1.64e-53 178
MS.gene48340.t1 AT5G62320 52.597 154 66 1 2 148 3 156 3.66e-53 176
MS.gene48340.t1 AT3G28470 53.988 163 64 1 1 163 1 152 6.95e-53 177
MS.gene48340.t1 AT2G31180 48.634 183 85 2 1 174 1 183 1.39e-52 174
MS.gene48340.t1 AT5G07700 56.061 132 58 0 1 132 1 132 2.91e-52 176
MS.gene48340.t1 AT5G07700 56.061 132 58 0 1 132 1 132 2.91e-52 176
MS.gene48340.t1 AT3G23250 43.939 198 92 3 1 185 1 192 5.19e-52 174
MS.gene48340.t1 AT5G26660 67.769 121 39 0 43 163 12 132 3.88e-51 173
MS.gene48340.t1 AT1G18710 58.015 131 55 0 1 131 1 131 5.31e-51 171
MS.gene48340.t1 AT3G48920 66.964 112 36 1 9 119 15 126 2.02e-50 169
MS.gene48340.t1 AT1G06180 66.379 116 39 0 1 116 1 116 2.15e-50 169
MS.gene48340.t1 AT1G79180 65.217 115 40 0 2 116 4 118 8.66e-50 169
MS.gene48340.t1 AT1G16490 63.478 115 42 0 2 116 4 118 8.98e-48 163
MS.gene48340.t1 AT1G56160 63.478 115 42 0 2 116 4 118 2.35e-47 162
MS.gene48340.t1 AT4G25560 66.972 109 36 0 10 118 8 116 2.46e-47 162
MS.gene48340.t1 AT5G57620 60.169 118 46 1 1 117 1 118 4.06e-47 163
MS.gene48340.t1 AT5G23000 60.169 118 46 1 1 117 1 118 7.55e-47 162
MS.gene48340.t1 AT2G47460 51.701 147 66 1 1 147 1 142 8.27e-47 163
MS.gene48340.t1 AT5G65790 54.348 138 57 2 1 137 1 133 8.95e-47 163
MS.gene48340.t1 AT3G62610 51.007 149 73 0 1 149 1 149 1.24e-46 162
MS.gene48340.t1 AT3G49690 59.167 120 48 1 1 119 1 120 2.75e-46 160
MS.gene48340.t1 AT5G49330 62.069 116 44 0 1 116 1 116 6.30e-46 160
MS.gene48340.t1 AT5G52260 67.273 110 36 0 9 118 9 118 1.80e-45 157
MS.gene48340.t1 AT1G74650 60.684 117 46 0 1 117 1 117 4.91e-45 157
MS.gene48340.t1 AT3G47600 59.322 118 48 0 1 118 1 118 1.06e-44 157
MS.gene48340.t1 AT3G12820 59.829 117 47 0 3 119 5 121 1.75e-44 153
MS.gene48340.t1 AT4G37780 58.197 122 49 2 1 120 1 122 4.31e-44 154
MS.gene48340.t1 AT5G62470 59.322 118 48 0 1 118 1 118 4.68e-44 155
MS.gene48340.t1 AT1G08810 58.197 122 51 0 1 122 1 122 6.15e-44 153
MS.gene48340.t1 AT2G36890 53.543 127 58 1 1 126 1 127 6.60e-44 154
MS.gene48340.t1 AT5G14750 59.615 104 42 0 13 116 17 120 7.96e-44 150
MS.gene48340.t1 AT2G36890 53.543 127 58 1 1 126 42 168 1.16e-43 154
MS.gene48340.t1 AT3G27920 55.556 108 48 0 10 117 12 119 8.20e-43 149
MS.gene48340.t1 AT5G35550 61.818 110 42 0 9 118 11 120 8.79e-43 149
MS.gene48340.t1 AT1G79180 50.676 148 40 1 2 116 4 151 9.94e-43 151
MS.gene48340.t1 AT5G40330 58.654 104 43 0 13 116 13 116 2.28e-42 147
MS.gene48340.t1 AT5G62470 59.322 118 47 1 1 118 1 117 3.17e-42 150
MS.gene48340.t1 AT3G28910 54.264 129 57 1 1 129 1 127 6.26e-42 149
MS.gene48340.t1 AT3G01530 59.048 105 43 0 12 116 25 129 2.10e-41 144
MS.gene48340.t1 AT5G52600 49.265 136 60 1 9 135 9 144 4.53e-41 143
MS.gene48340.t1 AT5G40350 55.455 110 49 0 11 120 16 125 1.47e-40 142
MS.gene48340.t1 AT5G55020 60.909 110 42 1 12 121 26 134 2.40e-40 149
MS.gene48340.t1 AT3G27810 52.174 115 55 0 11 125 19 133 1.53e-39 140
MS.gene48340.t1 AT5G06100 58.654 104 43 0 12 115 32 135 1.63e-39 145
MS.gene48340.t1 AT4G26930 58.182 110 45 1 12 121 19 127 2.00e-39 144
MS.gene48340.t1 AT5G06100 58.654 104 43 0 12 115 32 135 6.15e-39 145
MS.gene48340.t1 AT5G06100 58.654 104 43 0 12 115 32 135 6.15e-39 145
MS.gene48340.t1 AT5G06100 58.654 104 43 0 12 115 32 135 6.15e-39 145
MS.gene48340.t1 AT5G06100 58.654 104 43 0 12 115 32 135 6.15e-39 145
MS.gene48340.t1 AT2G26960 55.140 107 48 0 8 114 16 122 2.48e-38 142
MS.gene48340.t1 AT3G11440 55.769 104 46 0 12 115 41 144 3.59e-38 142
MS.gene48340.t1 AT4G13480 49.286 140 59 2 8 140 2 136 9.41e-38 136
MS.gene48340.t1 AT3G30210 45.638 149 77 1 13 161 28 172 1.39e-37 136
MS.gene48340.t1 AT3G24310 56.481 108 47 0 8 115 14 121 1.45e-37 136
MS.gene48340.t1 AT3G11440 54.206 107 49 0 9 115 38 144 1.47e-37 142
MS.gene48340.t1 AT3G11440 54.206 107 49 0 9 115 38 144 1.47e-37 142
MS.gene48340.t1 AT3G11440 54.206 107 49 0 9 115 38 144 1.47e-37 142
MS.gene48340.t1 AT2G32460 54.630 108 49 0 8 115 2 109 2.07e-37 140
MS.gene48340.t1 AT2G32460 55.660 106 47 0 10 115 16 121 2.15e-37 140
MS.gene48340.t1 AT1G48000 56.364 110 46 1 11 118 31 140 3.29e-37 134
MS.gene48340.t1 AT1G25340 52.174 115 55 0 13 127 19 133 5.57e-37 135
MS.gene48340.t1 AT1G68320 51.695 118 57 0 10 127 17 134 1.47e-36 134
MS.gene48340.t1 AT1G66370 55.769 104 46 0 12 115 8 111 3.59e-36 132
MS.gene48340.t1 AT1G66380 48.921 139 61 1 12 150 8 136 3.99e-36 128
MS.gene48340.t1 AT3G53200 42.690 171 96 2 9 178 6 175 8.80e-36 130
MS.gene48340.t1 AT5G59780 51.261 119 56 1 8 124 4 122 2.99e-35 129
MS.gene48340.t1 AT3G46130 52.632 114 52 1 13 124 10 123 8.28e-35 128
MS.gene48340.t1 AT3G60460 55.140 107 47 1 9 114 8 114 2.79e-34 128
MS.gene48340.t1 AT2G47190 50.962 104 51 0 12 115 20 123 3.74e-34 127
MS.gene48340.t1 AT1G56650 47.101 138 63 1 12 149 8 135 1.91e-33 124
MS.gene48340.t1 AT2G26950 45.690 116 62 1 6 121 10 124 4.77e-33 127
MS.gene48340.t1 AT3G06490 57.282 103 44 0 12 114 19 121 1.67e-32 124
MS.gene48340.t1 AT1G25340 49.565 115 53 1 13 127 19 128 3.93e-32 122
MS.gene48340.t1 AT1G66390 56.604 106 46 0 10 115 6 111 4.70e-32 121
MS.gene48340.t1 AT1G25340 49.565 115 53 1 13 127 19 128 8.55e-32 122
MS.gene48340.t1 AT5G14750 64.935 77 24 1 40 116 13 86 3.08e-31 116
MS.gene48340.t1 AT3G12820 69.444 72 22 0 48 119 2 73 4.79e-31 116
MS.gene48340.t1 AT5G35550 71.622 74 21 0 45 118 50 123 1.15e-30 117
MS.gene48340.t1 AT5G49620 54.369 103 47 0 12 114 26 128 2.34e-30 118
MS.gene48340.t1 AT1G22640 55.056 89 37 1 58 143 1 89 7.27e-30 114
MS.gene48340.t1 AT5G40350 59.211 76 31 0 45 120 5 80 1.16e-28 109
MS.gene48340.t1 AT3G47600 54.737 95 39 1 24 118 22 112 1.46e-28 113
MS.gene48340.t1 AT3G27810 54.321 81 37 0 45 125 4 84 5.61e-28 108
MS.gene48340.t1 AT3G53200 43.796 137 75 2 43 178 7 142 6.59e-28 108
MS.gene48340.t1 AT3G46130 57.831 83 33 1 44 124 9 91 8.75e-28 108
MS.gene48340.t1 AT3G46130 57.143 84 34 1 43 124 18 101 1.95e-27 108
MS.gene48340.t1 AT1G71030 58.442 77 32 0 51 127 5 81 4.03e-27 105
MS.gene48340.t1 AT4G18770 40.458 131 76 2 9 138 212 341 4.42e-27 111
MS.gene48340.t1 AT1G71030 58.442 77 32 0 51 127 19 95 4.69e-27 106
MS.gene48340.t1 AT5G59780 57.143 84 34 1 43 124 18 101 5.73e-27 106
MS.gene48340.t1 AT5G49620 47.863 117 47 1 12 114 26 142 7.74e-27 108
MS.gene48340.t1 AT3G55730 48.551 138 62 5 14 147 56 188 2.39e-26 108
MS.gene48340.t1 AT1G18960 44.915 118 60 3 14 130 10 123 3.45e-26 106
MS.gene48340.t1 AT3G09230 49.038 104 52 1 14 117 55 157 5.25e-26 107
MS.gene48340.t1 AT3G09370 44.715 123 63 2 7 125 123 244 7.92e-26 108
MS.gene48340.t1 AT1G66380 49.057 106 44 1 45 150 8 103 7.96e-26 100
MS.gene48340.t1 AT3G09370 44.715 123 63 2 7 125 128 249 8.64e-26 108
MS.gene48340.t1 AT3G27785 45.370 108 56 2 9 115 184 289 1.14e-25 107
MS.gene48340.t1 AT5G02320 43.966 116 64 1 1 116 54 168 1.29e-25 107
MS.gene48340.t1 AT5G02320 45.455 110 59 1 7 116 120 228 1.51e-25 108
MS.gene48340.t1 AT5G02320 45.455 110 59 1 7 116 120 228 1.51e-25 108
MS.gene48340.t1 AT3G09370 44.715 123 63 2 7 125 136 257 1.68e-25 107
MS.gene48340.t1 AT5G67300 49.020 102 51 1 14 115 6 106 3.71e-25 103
MS.gene48340.t1 AT2G39880 51.402 107 49 2 14 119 50 154 4.77e-25 104
MS.gene48340.t1 AT3G23250 38.298 141 68 3 58 185 1 135 7.61e-25 101
MS.gene48340.t1 AT4G37260 49.533 107 53 1 14 120 13 118 7.87e-25 103
MS.gene48340.t1 AT5G40360 40.566 106 62 1 9 114 153 257 1.56e-24 103
MS.gene48340.t1 AT5G11510 44.545 110 60 1 7 116 74 182 1.68e-24 105
MS.gene48340.t1 AT5G11510 44.545 110 60 1 7 116 74 182 1.68e-24 105
MS.gene48340.t1 AT5G11510 44.545 110 60 1 7 116 74 182 1.68e-24 105
MS.gene48340.t1 AT5G11510 44.954 109 59 1 8 116 75 182 2.61e-24 104
MS.gene48340.t1 AT3G50060 48.039 102 52 1 14 115 6 106 3.10e-24 101
MS.gene48340.t1 AT5G11510 44.954 109 59 1 8 116 75 182 3.12e-24 104
MS.gene48340.t1 AT2G23290 50.980 102 49 1 14 115 13 113 5.50e-24 100
MS.gene48340.t1 AT4G32730 44.037 109 60 1 8 116 81 188 7.97e-24 103
MS.gene48340.t1 AT4G32730 44.037 109 60 1 8 116 81 188 7.97e-24 103
MS.gene48340.t1 AT4G32730 44.037 109 60 1 8 116 81 188 7.97e-24 103
MS.gene48340.t1 AT4G32730 44.037 109 60 1 8 116 81 188 7.97e-24 103
MS.gene48340.t1 AT4G32730 44.037 109 60 1 8 116 81 188 8.87e-24 103
MS.gene48340.t1 AT1G17950 42.157 102 58 1 14 115 5 105 9.01e-24 99.0
MS.gene48340.t1 AT5G58850 41.509 106 61 1 10 115 101 205 9.41e-24 102
MS.gene48340.t1 AT1G69560 41.071 112 63 2 9 119 102 211 1.33e-23 100
MS.gene48340.t1 AT1G69560 41.071 112 63 2 9 119 118 227 1.97e-23 99.8
MS.gene48340.t1 AT5G11050 41.176 102 59 1 14 115 105 205 9.85e-23 99.0
MS.gene48340.t1 AT1G26780 42.857 105 57 2 12 115 96 198 1.59e-22 96.3
MS.gene48340.t1 AT5G14750 64.407 59 21 0 58 116 1 59 2.27e-22 92.0
MS.gene48340.t1 AT5G14750 64.407 59 21 0 58 116 1 59 2.27e-22 92.0
MS.gene48340.t1 AT1G26780 42.857 105 57 2 12 115 96 198 2.67e-22 97.1
MS.gene48340.t1 AT2G25230 35.443 158 85 4 9 164 21 163 5.12e-22 93.6
MS.gene48340.t1 AT1G73410 42.718 103 56 2 14 115 6 106 1.85e-21 92.4
MS.gene48340.t1 AT5G17800 40.196 102 60 1 14 115 93 193 2.72e-21 93.6
MS.gene48340.t1 AT1G66380 56.250 80 35 0 10 89 6 85 3.22e-21 87.8
MS.gene48340.t1 AT4G33450 38.318 107 65 1 9 115 14 119 5.16e-21 91.3
MS.gene48340.t1 AT1G73410 42.718 103 56 2 14 115 6 106 5.57e-21 90.1
MS.gene48340.t1 AT3G29020 37.736 106 65 1 14 119 67 171 2.35e-20 90.5
MS.gene48340.t1 AT3G29020 37.736 106 65 1 14 119 65 169 3.36e-20 88.6
MS.gene48340.t1 AT5G40430 36.607 112 69 2 9 120 49 158 5.18e-18 83.2
MS.gene48340.t1 AT4G00540 39.823 113 64 2 7 116 96 207 5.52e-18 85.1
MS.gene48340.t1 AT4G00540 39.823 113 64 2 7 116 94 205 1.08e-17 84.3
MS.gene48340.t1 AT5G61420 63.462 52 19 0 81 132 2 53 3.92e-17 81.3
MS.gene48340.t1 AT2G37630 41.489 94 53 1 17 108 7 100 5.09e-17 81.6
MS.gene48340.t1 AT2G02820 38.053 113 68 2 4 115 19 130 8.07e-17 81.6
MS.gene48340.t1 AT2G02820 38.053 113 68 2 4 115 19 130 8.87e-17 80.9
MS.gene48340.t1 AT2G02820 38.053 113 68 2 4 115 19 130 1.16e-16 81.3
MS.gene48340.t1 AT1G74430 60.345 58 23 0 77 134 8 65 1.18e-16 78.2
MS.gene48340.t1 AT5G39700 35.135 111 71 1 9 119 51 160 1.23e-15 74.7
MS.gene48340.t1 AT1G14350 39.394 99 59 1 17 115 28 125 1.41e-15 78.2
MS.gene48340.t1 AT1G14350 39.394 99 59 1 17 115 28 125 1.41e-15 78.2
MS.gene48340.t1 AT4G25560 64.000 50 18 0 69 118 1 50 8.84e-15 73.2
MS.gene48340.t1 AT5G15310 65.957 47 16 0 88 134 9 55 1.73e-14 72.8
MS.gene48340.t1 AT4G28110 65.854 41 14 0 88 128 4 44 2.88e-14 71.2
MS.gene48340.t1 AT1G22640 50.847 59 26 1 88 143 16 74 3.71e-14 70.5
MS.gene48340.t1 AT3G46130 53.704 54 23 1 73 124 4 57 1.16e-12 66.6
MS.gene48340.t1 AT5G59780 50.877 57 26 1 70 124 1 57 2.33e-12 65.1
MS.gene48340.t1 AT5G14340 50.847 59 21 1 88 146 10 60 1.88e-11 62.8
MS.gene48340.t1 AT1G74650 65.854 41 14 0 77 117 1 41 3.49e-11 63.2
MS.gene48340.t1 AT3G28910 54.717 53 22 1 77 129 1 51 4.66e-11 62.8

Find 55 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTGAAAGTGATGTTAA+TGG 0.241227 8.3:-17529827 None:intergenic
GCTATAAAATCTGAAGATTA+TGG 0.250747 8.3:+17529740 MS.gene48340:CDS
TTCAATCACATAACCAGATT+TGG 0.287847 8.3:+17528648 MS.gene48340:CDS
CCAGATTTGGTGTTGGTTGC+TGG 0.289527 8.3:+17528661 MS.gene48340:CDS
TTCTGCTATGATTTCCAATC+TGG 0.306161 8.3:+17529374 MS.gene48340:CDS
TCGAGTTACTATGATGATAA+TGG 0.318372 8.3:+17529296 MS.gene48340:CDS
AACATTCCTCTCTTTAAATC+AGG 0.339120 8.3:-17528831 None:intergenic
TTAAGATACGCTTCTGTAAG+AGG 0.356389 8.3:-17529194 None:intergenic
AATTACTTACCAGCTTGTTT+AGG 0.369671 8.3:-17528693 None:intergenic
TTCATGAAGTCCTTGGAAAT+AGG 0.386858 8.3:+17528886 MS.gene48340:CDS
GTAAGAGGCTTGTGTGTTGT+TGG 0.393471 8.3:-17529179 None:intergenic
CCAGCAACCAACACCAAATC+TGG 0.395560 8.3:-17528661 None:intergenic
GACTCTGATCACATGGTTTG+TGG 0.425354 8.3:-17529430 None:intergenic
GGATGGATCAGAAAACAAAT+TGG 0.426049 8.3:+17529691 MS.gene48340:CDS
CCATGTGATCAGAGTCAATT+CGG 0.429235 8.3:+17529437 MS.gene48340:CDS
TTTACTTGGAACTGAAACAT+AGG 0.434255 8.3:-17529716 None:intergenic
AAGATTATGGAACTAGTTCA+TGG 0.437284 8.3:+17529753 MS.gene48340:CDS
AATTTACAATTCATATATGA+TGG 0.446483 8.3:-17529877 None:intergenic
TGAGATGGATAAACTATTTG+AGG 0.450225 8.3:+17528808 MS.gene48340:CDS
TCATTGTTCATTAATGATCA+AGG 0.452544 8.3:+17529569 MS.gene48340:CDS
TTTCACCAACAAACAAGCAT+TGG 0.454876 8.3:+17529343 MS.gene48340:CDS
TAGGTAAGTTATAACCAGAT+TGG 0.455802 8.3:-17529388 None:intergenic
ATCAGTCTTCATGAAGTCCT+TGG 0.474400 8.3:+17528879 MS.gene48340:CDS
CAAATAGCAGCACAATTACC+AGG 0.477311 8.3:+17529083 MS.gene48340:CDS
TCAAATGAGAAGTACTATGA+TGG 0.493294 8.3:+17529643 MS.gene48340:CDS
ATGATGGAAAATAACAATGC+AGG 0.493671 8.3:+17529659 MS.gene48340:CDS
CTTTCAGGACTTCAAAGATG+TGG 0.499979 8.3:+17528771 MS.gene48340:intron
CACATAACCAGATTTGGTGT+TGG 0.505261 8.3:+17528654 MS.gene48340:CDS
AGGGTCCAATGCTTGTTTGT+TGG 0.508884 8.3:-17529348 None:intergenic
ATCATCATAGTAACTCGAAT+CGG 0.515891 8.3:-17529291 None:intergenic
TCTTACAGAAGCGTATCTTA+AGG 0.516237 8.3:+17529196 MS.gene48340:CDS
AAGAAGAAGCTTCTAAAGCA+AGG 0.517547 8.3:+17529149 MS.gene48340:CDS
ATAGTACTTCTCATTTGAGA+TGG 0.517884 8.3:-17529638 None:intergenic
GGAAATCATAGCAGAACAAA+GGG 0.529276 8.3:-17529367 None:intergenic
ATTTCATTATCTGTTCTCCC+TGG 0.534130 8.3:-17529101 None:intergenic
CCTTATGTTACCTATTTCCA+AGG 0.537924 8.3:-17528896 None:intergenic
TTGAGGCCTGATTTAAAGAG+AGG 0.539010 8.3:+17528825 MS.gene48340:CDS
GGAACTAGTTCATGGGAAGA+AGG 0.543673 8.3:+17529761 MS.gene48340:CDS
CCGAATTGACTCTGATCACA+TGG 0.550295 8.3:-17529437 None:intergenic
TGATGGAAAATAACAATGCA+GGG 0.558719 8.3:+17529660 MS.gene48340:CDS
TGATCTGAATTTGTTAGACT+CGG 0.559414 8.3:-17529491 None:intergenic
CTTGTGTGATCATTACTCAT+AGG 0.561692 8.3:-17529407 None:intergenic
AGAAGAAGCTTCTAAAGCAA+GGG 0.563543 8.3:+17529150 MS.gene48340:CDS
CATTGTTCATTAATGATCAA+GGG 0.568836 8.3:+17529570 MS.gene48340:CDS
TTACTTGGAACTGAAACATA+GGG 0.577045 8.3:-17529715 None:intergenic
TGGAAATCATAGCAGAACAA+AGG 0.583893 8.3:-17529368 None:intergenic
GAAAGAGTTGTAGATTGAGA+TGG 0.584976 8.3:+17528793 MS.gene48340:CDS
AGTTCTGTTCCTAAACAAGC+TGG 0.588563 8.3:+17528684 MS.gene48340:CDS
TGTGATGGTATTTGCATAGG+TGG 0.620021 8.3:-17529248 None:intergenic
CCATGTGATGGTATTTGCAT+AGG 0.627759 8.3:-17529251 None:intergenic
AGATTATGGAACTAGTTCAT+GGG 0.627814 8.3:+17529754 MS.gene48340:CDS
GTTGTCCGAAAACTCTGTCA+CGG 0.647107 8.3:-17529525 None:intergenic
CCTATGCAAATACCATCACA+TGG 0.666893 8.3:+17529251 MS.gene48340:CDS
AGAAATGCTGAACCATGTGA+TGG 0.672145 8.3:-17529263 None:intergenic
AAATAGCAGCACAATTACCA+GGG 0.695212 8.3:+17529084 MS.gene48340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATGAAATTAAAAACTTT+TGG + chr8.3:17529114-17529133 MS.gene48340:CDS 10.0%
!!! TTTCTTTTTTTGAACATTAT+AGG + chr8.3:17529054-17529073 MS.gene48340:intron 15.0%
!! GTAAATTTGATAAAATCACA+AGG - chr8.3:17528997-17529016 None:intergenic 20.0%
!!! TTTTTTTGAACATTATAGGT+GGG + chr8.3:17529058-17529077 MS.gene48340:intron 20.0%
! AAAAATTGAGGAAAGGTTTA+TGG + chr8.3:17528601-17528620 MS.gene48340:CDS 25.0%
! CATTGTTCATTAATGATCAA+GGG + chr8.3:17529570-17529589 MS.gene48340:CDS 25.0%
! GATTCAATATATATCGTGTT+TGG + chr8.3:17528940-17528959 MS.gene48340:intron 25.0%
! GCTATAAAATCTGAAGATTA+TGG + chr8.3:17529740-17529759 MS.gene48340:CDS 25.0%
! TCATTGTTCATTAATGATCA+AGG + chr8.3:17529569-17529588 MS.gene48340:CDS 25.0%
! TTAAAGCAAAAATTGAGGAA+AGG + chr8.3:17528594-17528613 MS.gene48340:CDS 25.0%
!! CAGATTTTATAGCATTTACT+TGG - chr8.3:17529733-17529752 None:intergenic 25.0%
!! GTTGTTTAAAGCAAAAATTG+AGG + chr8.3:17528589-17528608 MS.gene48340:CDS 25.0%
!!! CTTTTTTTGAACATTATAGG+TGG + chr8.3:17529057-17529076 MS.gene48340:intron 25.0%
AACATTCCTCTCTTTAAATC+AGG - chr8.3:17528834-17528853 None:intergenic 30.0%
AAGATTATGGAACTAGTTCA+TGG + chr8.3:17529753-17529772 MS.gene48340:CDS 30.0%
AGATTATGGAACTAGTTCAT+GGG + chr8.3:17529754-17529773 MS.gene48340:CDS 30.0%
ATAGTACTTCTCATTTGAGA+TGG - chr8.3:17529641-17529660 None:intergenic 30.0%
ATCATCATAGTAACTCGAAT+CGG - chr8.3:17529294-17529313 None:intergenic 30.0%
TAGGTAAGTTATAACCAGAT+TGG - chr8.3:17529391-17529410 None:intergenic 30.0%
TCAAAACTAAGAGTCTAACA+TGG + chr8.3:17528737-17528756 MS.gene48340:intron 30.0%
TCGAGTTACTATGATGATAA+TGG + chr8.3:17529296-17529315 MS.gene48340:CDS 30.0%
TGAGATGGATAAACTATTTG+AGG + chr8.3:17528808-17528827 MS.gene48340:CDS 30.0%
TGATGGAAAATAACAATGCA+GGG + chr8.3:17529660-17529679 MS.gene48340:CDS 30.0%
TTACTTGGAACTGAAACATA+GGG - chr8.3:17529718-17529737 None:intergenic 30.0%
TTCAATCACATAACCAGATT+TGG + chr8.3:17528648-17528667 MS.gene48340:CDS 30.0%
TTTACTTGGAACTGAAACAT+AGG - chr8.3:17529719-17529738 None:intergenic 30.0%
! AAAAGCTTTTCATCTTCTTC+AGG - chr8.3:17528630-17528649 None:intergenic 30.0%
! AATTACTTACCAGCTTGTTT+AGG - chr8.3:17528696-17528715 None:intergenic 30.0%
! ATATATCGTGTTTGGAATCA+CGG + chr8.3:17528948-17528967 MS.gene48340:intron 30.0%
! ATGATGGAAAATAACAATGC+AGG + chr8.3:17529659-17529678 MS.gene48340:CDS 30.0%
! TCTTCTGAAAGTGATGTTAA+TGG - chr8.3:17529830-17529849 None:intergenic 30.0%
!! ATGGTTGATGAATTTCTTTC+AGG + chr8.3:17528756-17528775 MS.gene48340:intron 30.0%
!! TCAAATGAGAAGTACTATGA+TGG + chr8.3:17529643-17529662 MS.gene48340:CDS 30.0%
!! TGATCTGAATTTGTTAGACT+CGG - chr8.3:17529494-17529513 None:intergenic 30.0%
AAATAGCAGCACAATTACCA+GGG + chr8.3:17529084-17529103 MS.gene48340:CDS 35.0%
ATTTCATTATCTGTTCTCCC+TGG - chr8.3:17529104-17529123 None:intergenic 35.0%
CCTTATGTTACCTATTTCCA+AGG - chr8.3:17528899-17528918 None:intergenic 35.0%
CCTTGGAAATAGGTAACATA+AGG + chr8.3:17528896-17528915 MS.gene48340:intron 35.0%
CTTGTGTGATCATTACTCAT+AGG - chr8.3:17529410-17529429 None:intergenic 35.0%
GAAAGAGTTGTAGATTGAGA+TGG + chr8.3:17528793-17528812 MS.gene48340:CDS 35.0%
GGAAATCATAGCAGAACAAA+GGG - chr8.3:17529370-17529389 None:intergenic 35.0%
GGATGGATCAGAAAACAAAT+TGG + chr8.3:17529691-17529710 MS.gene48340:CDS 35.0%
TGGAAATCATAGCAGAACAA+AGG - chr8.3:17529371-17529390 None:intergenic 35.0%
TTAAGATACGCTTCTGTAAG+AGG - chr8.3:17529197-17529216 None:intergenic 35.0%
TTCATGAAGTCCTTGGAAAT+AGG + chr8.3:17528886-17528905 MS.gene48340:CDS 35.0%
TTCTGCTATGATTTCCAATC+TGG + chr8.3:17529374-17529393 MS.gene48340:CDS 35.0%
TTTCACCAACAAACAAGCAT+TGG + chr8.3:17529343-17529362 MS.gene48340:CDS 35.0%
! TCTTACAGAAGCGTATCTTA+AGG + chr8.3:17529196-17529215 MS.gene48340:CDS 35.0%
!! AAGAAGAAGCTTCTAAAGCA+AGG + chr8.3:17529149-17529168 MS.gene48340:CDS 35.0%
!! AGAAGAAGCTTCTAAAGCAA+GGG + chr8.3:17529150-17529169 MS.gene48340:CDS 35.0%
!! ATAACAATGCAGGGTTTTGT+TGG + chr8.3:17529669-17529688 MS.gene48340:CDS 35.0%
!!! TAACAATGCAGGGTTTTGTT+GGG + chr8.3:17529670-17529689 MS.gene48340:CDS 35.0%
AGAAATGCTGAACCATGTGA+TGG - chr8.3:17529266-17529285 None:intergenic 40.0%
AGTTCTGTTCCTAAACAAGC+TGG + chr8.3:17528684-17528703 MS.gene48340:CDS 40.0%
ATCAGTCTTCATGAAGTCCT+TGG + chr8.3:17528879-17528898 MS.gene48340:CDS 40.0%
CAAATAGCAGCACAATTACC+AGG + chr8.3:17529083-17529102 MS.gene48340:CDS 40.0%
CCATGTGATCAGAGTCAATT+CGG + chr8.3:17529437-17529456 MS.gene48340:CDS 40.0%
CCATGTGATGGTATTTGCAT+AGG - chr8.3:17529254-17529273 None:intergenic 40.0%
CCTATGCAAATACCATCACA+TGG + chr8.3:17529251-17529270 MS.gene48340:CDS 40.0%
CTTTCAGGACTTCAAAGATG+TGG + chr8.3:17528771-17528790 MS.gene48340:intron 40.0%
TGTGATGGTATTTGCATAGG+TGG - chr8.3:17529251-17529270 None:intergenic 40.0%
TTGAGGCCTGATTTAAAGAG+AGG + chr8.3:17528825-17528844 MS.gene48340:CDS 40.0%
!! CACATAACCAGATTTGGTGT+TGG + chr8.3:17528654-17528673 MS.gene48340:CDS 40.0%
AGGGTCCAATGCTTGTTTGT+TGG - chr8.3:17529351-17529370 None:intergenic 45.0%
GACTCTGATCACATGGTTTG+TGG - chr8.3:17529433-17529452 None:intergenic 45.0%
GGAACTAGTTCATGGGAAGA+AGG + chr8.3:17529761-17529780 MS.gene48340:CDS 45.0%
GTAAGAGGCTTGTGTGTTGT+TGG - chr8.3:17529182-17529201 None:intergenic 45.0%
GTTGTCCGAAAACTCTGTCA+CGG - chr8.3:17529528-17529547 None:intergenic 45.0%
! CCGAATTGACTCTGATCACA+TGG - chr8.3:17529440-17529459 None:intergenic 45.0%
! TGTGTCCGTGACAGAGTTTT+CGG + chr8.3:17529520-17529539 MS.gene48340:CDS 45.0%
!!! AATGCAGGGTTTTGTTGGGA+TGG + chr8.3:17529674-17529693 MS.gene48340:CDS 45.0%
CCAGCAACCAACACCAAATC+TGG - chr8.3:17528664-17528683 None:intergenic 50.0%
!! CCAGATTTGGTGTTGGTTGC+TGG + chr8.3:17528661-17528680 MS.gene48340:CDS 50.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 17528573 17529889 17528573 ID=MS.gene48340
chr8.3 mRNA 17528573 17529889 17528573 ID=MS.gene48340.t1;Parent=MS.gene48340
chr8.3 exon 17528573 17528705 17528573 ID=MS.gene48340.t1.exon1;Parent=MS.gene48340.t1
chr8.3 CDS 17528573 17528705 17528573 ID=cds.MS.gene48340.t1;Parent=MS.gene48340.t1
chr8.3 exon 17528778 17528907 17528778 ID=MS.gene48340.t1.exon2;Parent=MS.gene48340.t1
chr8.3 CDS 17528778 17528907 17528778 ID=cds.MS.gene48340.t1;Parent=MS.gene48340.t1
chr8.3 exon 17529076 17529889 17529076 ID=MS.gene48340.t1.exon3;Parent=MS.gene48340.t1
chr8.3 CDS 17529076 17529889 17529076 ID=cds.MS.gene48340.t1;Parent=MS.gene48340.t1
Gene Sequence

>MS.gene48340

ATGGGTCGTCATTCATGTTGTTTAAAGCAAAAATTGAGGAAAGGTTTATGGTCTCCTGAAGAAGATGAAAAGCTTTTCAATCACATAACCAGATTTGGTGTTGGTTGCTGGAGTTCTGTTCCTAAACAAGCTGGTAAGTAATTGTTAATATCATGTTACATTCTTCAAAACTAAGAGTCTAACATGGTTGATGAATTTCTTTCAGGACTTCAAAGATGTGGAAAGAGTTGTAGATTGAGATGGATAAACTATTTGAGGCCTGATTTAAAGAGAGGAATGTTCTCACAACAAGAAGAAGATCTTATAATCAGTCTTCATGAAGTCCTTGGAAATAGGTAACATAAGGATATATCATATATAAATATATGATTCAATATATATCGTGTTTGGAATCACGGTGAGTTTGACAAAATCATCGTAGCCTTGTGATTTTATCAAATTTACTGCGAATTCAAACATATTTCTTCAGTTACGAAATGAATTTCTTTTTTTGAACATTATAGGTGGGCTCAAATAGCAGCACAATTACCAGGGAGAACAGATAATGAAATTAAAAACTTTTGGAATTCATGTTTAAAGAAGAAGCTTCTAAAGCAAGGGATTGATCCAACAACACACAAGCCTCTTACAGAAGCGTATCTTAAGGAAGAGAACAAAATCACAGAAACAACAGCACCACCTATGCAAATACCATCACATGGTTCAGCATTTCTAATAACCGATTCGAGTTACTATGATGATAATGGCTTAACAGAAGCTTCAAGAGAAATTTTCACCAACAAACAAGCATTGGACCCTTTGTTCTGCTATGATTTCCAATCTGGTTATAACTTACCTATGAGTAATGATCACACAAGCCACAAACCATGTGATCAGAGTCAATTCGGATTTAATTCAAGCTATTGTTTCACTTCAATGCCGAGTCTAACAAATTCAGATCACGCAAATGTGTCCGTGACAGAGTTTTCGGACAACAATTCAGCTTCAAAATTCAGCTCATTGTTCATTAATGATCAAGGGAAAGAAAGCAATTCAAGTAATAGCTCAAATATGAGTACTATTTATCCATCTCAAATGAGAAGTACTATGATGGAAAATAACAATGCAGGGTTTTGTTGGGATGGATCAGAAAACAAATTGGACCCTATGTTTCAGTTCCAAGTAAATGCTATAAAATCTGAAGATTATGGAACTAGTTCATGGGAAGAAGGACAACTTCAAACTCATAATTCAATAGAAGATTTCAATAGCTATCCATTAACATCACTTTCAGAAGATTTAACAGAAGCAAATTTTGATGTCTTCCATCATATATGA
Protein sequence

>MS.gene48340.t1

MGRHSCCLKQKLRKGLWSPEEDEKLFNHITRFGVGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLLKQGIDPTTHKPLTEAYLKEENKITETTAPPMQIPSHGSAFLITDSSYYDDNGLTEASREIFTNKQALDPLFCYDFQSGYNLPMSNDHTSHKPCDQSQFGFNSSYCFTSMPSLTNSDHANVSVTEFSDNNSASKFSSLFINDQGKESNSSNSSNMSTIYPSQMRSTMMENNNAGFCWDGSENKLDPMFQFQVNAIKSEDYGTSSWEEGQLQTHNSIEDFNSYPLTSLSEDLTEANFDVFHHI