Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48414.t1 | XP_003602909.1 | 98.8 | 591 | 7 | 0 | 1 | 591 | 126 | 716 | 2.00E-307 | 1064.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48414.t1 | Q56X46 | 58.0 | 588 | 209 | 7 | 1 | 587 | 117 | 667 | 1.3e-177 | 624.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48414.t1 | G7J535 | 98.8 | 591 | 7 | 0 | 1 | 591 | 126 | 716 | 1.5e-307 | 1064.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052153 | MS.gene48414 | 0.898072 | 7.59E-77 | -1.69E-46 |
| MS.gene052155 | MS.gene48414 | 0.910142 | 2.61E-82 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 127 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGCCTTTGCTGTTTA+TGG | 0.117984 | 3.1:+79743674 | MS.gene48414:CDS |
| TGCAAAATTCTCATCACTTT+TGG | 0.160964 | 3.1:-79747989 | None:intergenic |
| ATTGAGGGGTATAAGGTTTC+TGG | 0.194350 | 3.1:+79745595 | MS.gene48414:CDS |
| TCTTCACCATTAACTTTATA+CGG | 0.230735 | 3.1:-79747886 | None:intergenic |
| GTCTGAGATGGCAGGATTAT+TGG | 0.231716 | 3.1:-79744035 | None:intergenic |
| TCCTTGGAGTTTACACTAGA+TGG | 0.266948 | 3.1:-79748027 | None:intergenic |
| AAGAAGAATATTCTCTTCTA+AGG | 0.269634 | 3.1:-79748334 | None:intergenic |
| ATCCACTCATTCAATATAAA+TGG | 0.277217 | 3.1:-79745562 | None:intergenic |
| GAACCACCGTATAAAGTTAA+TGG | 0.285284 | 3.1:+79747880 | MS.gene48414:CDS |
| AACAAAGATTGAGGGGTATA+AGG | 0.285821 | 3.1:+79745588 | MS.gene48414:CDS |
| TTATTGCCTTTGCTGTTTAT+GGG | 0.298393 | 3.1:+79743675 | MS.gene48414:CDS |
| AGCTGATATGCGCAAGGTTT+TGG | 0.309117 | 3.1:+79746096 | MS.gene48414:CDS |
| TGCTGCTGTGTCATTATTCA+TGG | 0.310689 | 3.1:+79745190 | MS.gene48414:CDS |
| TGGTTAACTGCTGGTGGTTT+GGG | 0.312167 | 3.1:+79745239 | MS.gene48414:CDS |
| TTAGAAGAGAATATTCTTCT+TGG | 0.319652 | 3.1:+79748336 | MS.gene48414:CDS |
| AACTATCAGAACCCATGTTC+TGG | 0.320526 | 3.1:-79748080 | None:intergenic |
| CTTCTTGGGGTTGCACTTGA+AGG | 0.322534 | 3.1:+79748351 | MS.gene48414:CDS |
| TGCTCTGGATCGAGTGAAAA+TGG | 0.324671 | 3.1:-79747830 | None:intergenic |
| GAAACAGGAGGCAATCCTTT+TGG | 0.327663 | 3.1:+79747699 | MS.gene48414:intron |
| TCCGGATGGGAGTGGCTAAC+CGG | 0.331872 | 3.1:-79747753 | None:intergenic |
| TAGAAGAGAATATTCTTCTT+GGG | 0.339763 | 3.1:+79748337 | MS.gene48414:CDS |
| AGCAATATACACTGCTGTTT+GGG | 0.342027 | 3.1:+79745166 | MS.gene48414:CDS |
| AAGCAATATACACTGCTGTT+TGG | 0.345518 | 3.1:+79745165 | MS.gene48414:CDS |
| CGGGCGATTCACTGCTGCTC+TGG | 0.357040 | 3.1:-79747845 | None:intergenic |
| CAGCCATTATTATTGTGGAC+TGG | 0.362516 | 3.1:+79743910 | MS.gene48414:CDS |
| GGATTCATTTCTTCCTCAAT+TGG | 0.382478 | 3.1:-79748390 | None:intergenic |
| CCTCGGAAAATATACCCTTT+GGG | 0.382562 | 3.1:+79747803 | MS.gene48414:CDS |
| ACGATCATCACCTCTAATAA+TGG | 0.384373 | 3.1:-79745835 | None:intergenic |
| GCCTCGGAAAATATACCCTT+TGG | 0.385437 | 3.1:+79747802 | MS.gene48414:CDS |
| GCCCCAGTCCACAATAATAA+TGG | 0.387380 | 3.1:-79743913 | None:intergenic |
| TCTTGTGACTCAGCCGAGTT+AGG | 0.388980 | 3.1:-79748417 | None:intergenic |
| ACAGTATTGCTCACTCTTGC+CGG | 0.390378 | 3.1:+79745263 | MS.gene48414:CDS |
| GACTCATGGTTAGTAATAAC+AGG | 0.390821 | 3.1:-79748222 | None:intergenic |
| GTGGTTAACTGCTGGTGGTT+TGG | 0.396659 | 3.1:+79745238 | MS.gene48414:CDS |
| TGAGGAGTACCTTTGTGTTA+AGG | 0.398606 | 3.1:+79746911 | MS.gene48414:CDS |
| ACATACATTTCTTGCATCAC+TGG | 0.405151 | 3.1:-79744762 | None:intergenic |
| TTGACAGTGAACTTGTGATT+AGG | 0.406344 | 3.1:-79745873 | None:intergenic |
| AGCCATTATTATTGTGGACT+GGG | 0.408214 | 3.1:+79743911 | MS.gene48414:CDS |
| TCCTTCTTATCTTTGTTAGC+AGG | 0.413944 | 3.1:-79748471 | None:intergenic |
| CTTTGACTTGGACTTATCCT+TGG | 0.417001 | 3.1:-79748043 | None:intergenic |
| CATTTGCTTACTGTTTATCA+AGG | 0.428109 | 3.1:+79744117 | MS.gene48414:CDS |
| ATATAAATGGCCGAGTTGTA+TGG | 0.432347 | 3.1:-79745549 | None:intergenic |
| CCACGAGTTGAACGAGTTGA+CGG | 0.433490 | 3.1:-79747919 | None:intergenic |
| AGCCACTACTTCGTCTCAGC+AGG | 0.445866 | 3.1:+79743702 | MS.gene48414:CDS |
| ACTATCAGAACCCATGTTCT+GGG | 0.446447 | 3.1:-79748079 | None:intergenic |
| TCCTGAAAACACAGCTCTAA+AGG | 0.450592 | 3.1:+79746180 | MS.gene48414:CDS |
| TTACTAACCATGAGTCTAGC+AGG | 0.459792 | 3.1:+79748229 | MS.gene48414:CDS |
| TCATTATTCATGGAGTTGCT+AGG | 0.467872 | 3.1:+79745200 | MS.gene48414:CDS |
| GCATTTGGAAATGAAGAGGT+TGG | 0.471934 | 3.1:-79748498 | None:intergenic |
| TTGCTTTCCCAGCAAAATCA+AGG | 0.476830 | 3.1:-79745148 | None:intergenic |
| TGGTCACCAACCATTATTAG+AGG | 0.477341 | 3.1:+79745825 | MS.gene48414:CDS |
| CCCGGTTAGCCACTCCCATC+CGG | 0.482156 | 3.1:+79747752 | MS.gene48414:CDS |
| GAGTTTGCTGTCCAACGGAA+TGG | 0.486188 | 3.1:+79748438 | MS.gene48414:CDS |
| TCCTGCTAACAAAGATAAGA+AGG | 0.488760 | 3.1:+79748470 | MS.gene48414:CDS |
| ATCTGACTCAGAAATCTCAT+TGG | 0.494433 | 3.1:+79745907 | MS.gene48414:CDS |
| TATGGATCATTATACTTGAA+AGG | 0.495848 | 3.1:-79745531 | None:intergenic |
| AATTTCTGTTGCTCCACTTG+AGG | 0.495916 | 3.1:-79746127 | None:intergenic |
| ACTGCAGAAGATGTAGGAAA+AGG | 0.496072 | 3.1:+79748144 | MS.gene48414:CDS |
| CCGGATGGGAGTGGCTAACC+GGG | 0.500022 | 3.1:-79747752 | None:intergenic |
| TTCTTATCTTTGTTAGCAGG+AGG | 0.502177 | 3.1:-79748468 | None:intergenic |
| TAAGGTTTCTGGCACTGTTG+AGG | 0.502672 | 3.1:+79745606 | MS.gene48414:CDS |
| GTGGTTCTATTAGTAAGAAC+GGG | 0.504498 | 3.1:-79747864 | None:intergenic |
| AGTTTGCTGTCCAACGGAAT+GGG | 0.505163 | 3.1:+79748439 | MS.gene48414:CDS |
| CCTGCCATCTCAGACTAGTC+AGG | 0.507836 | 3.1:+79744043 | MS.gene48414:CDS |
| CAACTCTGAGAAGATCCAAA+AGG | 0.513442 | 3.1:-79747714 | None:intergenic |
| GCTGTCCAACGGAATGGGAA+TGG | 0.514341 | 3.1:+79748444 | MS.gene48414:CDS |
| GGCCATTTATATTGAATGAG+TGG | 0.514735 | 3.1:+79745560 | MS.gene48414:CDS |
| CTGAACTGTCCGGATGGGAG+TGG | 0.519563 | 3.1:-79747761 | None:intergenic |
| TTGAGCATCAGACTTTGACT+TGG | 0.526242 | 3.1:-79748055 | None:intergenic |
| TTACATTTCTATCAGTCACT+TGG | 0.527731 | 3.1:+79745941 | MS.gene48414:CDS |
| TTCAGAGGACTGACAGCAGT+TGG | 0.529245 | 3.1:+79743848 | MS.gene48414:intron |
| GCAAGATGAAGAGAAATCTT+CGG | 0.529586 | 3.1:+79748287 | MS.gene48414:CDS |
| CTGGGGCAATGCTCATATGC+AGG | 0.532365 | 3.1:+79743929 | MS.gene48414:CDS |
| TGGATTCAAACAAAGATTGA+GGG | 0.532585 | 3.1:+79745580 | MS.gene48414:CDS |
| TCAGAAACTACACTATGTGC+AGG | 0.532696 | 3.1:-79748192 | None:intergenic |
| GTGGATTCAAACAAAGATTG+AGG | 0.532984 | 3.1:+79745579 | MS.gene48414:CDS |
| TGATGCTCAAACCCAGAACA+TGG | 0.533483 | 3.1:+79748068 | MS.gene48414:CDS |
| CTCGGAAAATATACCCTTTG+GGG | 0.533597 | 3.1:+79747804 | MS.gene48414:CDS |
| GAGGTCCATTCCCATTCCGT+TGG | 0.538198 | 3.1:-79748449 | None:intergenic |
| AGCAACAGAAATTGCACAGA+AGG | 0.539152 | 3.1:+79746137 | MS.gene48414:CDS |
| CTTAGCATTTGGAAATGAAG+AGG | 0.540708 | 3.1:-79748502 | None:intergenic |
| GACTCAGCCGAGTTAGGAGA+TGG | 0.546014 | 3.1:-79748411 | None:intergenic |
| AAAGAAACTGCAGAAGATGT+AGG | 0.549434 | 3.1:+79748138 | MS.gene48414:CDS |
| TTGTCAGTCATCATCGAGCC+CGG | 0.555870 | 3.1:+79747734 | MS.gene48414:CDS |
| AGAAGAGAATATTCTTCTTG+GGG | 0.555945 | 3.1:+79748338 | MS.gene48414:CDS |
| TGTCTGCCCTGCTAGACTCA+TGG | 0.556999 | 3.1:-79748236 | None:intergenic |
| GTGAAAATGGAATCCCCAAA+GGG | 0.563083 | 3.1:-79747817 | None:intergenic |
| AGAATATTCTCTTCTAAGGG+AGG | 0.566683 | 3.1:-79748330 | None:intergenic |
| TGCCACAGGTTCATCAACCT+TGG | 0.570082 | 3.1:-79747959 | None:intergenic |
| AGAAGAATATTCTCTTCTAA+GGG | 0.571417 | 3.1:-79748333 | None:intergenic |
| GGAGGTTTAACTGCTGATGA+TGG | 0.571460 | 3.1:-79748312 | None:intergenic |
| CACAAGAGTTTGCTGTCCAA+CGG | 0.571868 | 3.1:+79748433 | MS.gene48414:CDS |
| CAGAAACTACACTATGTGCA+GGG | 0.572356 | 3.1:-79748191 | None:intergenic |
| AATATACAGTGAGCCTGCCT+CGG | 0.575648 | 3.1:+79747786 | MS.gene48414:CDS |
| ACACAGAAGTGGTTAACTGC+TGG | 0.580779 | 3.1:+79745230 | MS.gene48414:CDS |
| GCTAACAAAGATAAGAAGGA+TGG | 0.580826 | 3.1:+79748474 | MS.gene48414:CDS |
| GGTGGTTCTATTAGTAAGAA+CGG | 0.584350 | 3.1:-79747865 | None:intergenic |
| ACAGTGGTGTACCTCTCGAC+CGG | 0.589587 | 3.1:-79745282 | None:intergenic |
| TCCATCTAGTGTAAACTCCA+AGG | 0.591305 | 3.1:+79748026 | MS.gene48414:CDS |
| CCGTCAACTCGTTCAACTCG+TGG | 0.592850 | 3.1:+79747919 | MS.gene48414:CDS |
| CCTGACTAGTCTGAGATGGC+AGG | 0.593866 | 3.1:-79744043 | None:intergenic |
| GCCATTATTATTGTGGACTG+GGG | 0.594152 | 3.1:+79743912 | MS.gene48414:CDS |
| TCATCACCTCTAATAATGGT+TGG | 0.596112 | 3.1:-79745831 | None:intergenic |
| CTCAATCCCATAAACAGCAA+AGG | 0.602491 | 3.1:-79743681 | None:intergenic |
| GCTCACTCTTGCCGGTCGAG+AGG | 0.602784 | 3.1:+79745271 | MS.gene48414:CDS |
| AATGAATCCATCTCCTAACT+CGG | 0.604421 | 3.1:+79748404 | MS.gene48414:CDS |
| TAGGTTTCTCCACACAGAAG+TGG | 0.609034 | 3.1:+79745219 | MS.gene48414:CDS |
| TATTGTAGCTGATATGCGCA+AGG | 0.609834 | 3.1:+79746090 | MS.gene48414:CDS |
| CAGAAGTGGTTAACTGCTGG+TGG | 0.614907 | 3.1:+79745233 | MS.gene48414:CDS |
| ACGACCTGACTAGTCTGAGA+TGG | 0.620289 | 3.1:-79744047 | None:intergenic |
| ATCCTGCTGAGACGAAGTAG+TGG | 0.624352 | 3.1:-79743704 | None:intergenic |
| AGCAAAGGCAATAATACCAA+GGG | 0.628101 | 3.1:-79743666 | None:intergenic |
| TCGTTCAACTCGTGGCAATG+AGG | 0.629437 | 3.1:+79747927 | MS.gene48414:CDS |
| CATGGGTTCTGATAGTTCAG+TGG | 0.631810 | 3.1:+79748086 | MS.gene48414:CDS |
| TACTAACCATGAGTCTAGCA+GGG | 0.636326 | 3.1:+79748230 | MS.gene48414:CDS |
| GCAACAGAAATTGCACAGAA+GGG | 0.640894 | 3.1:+79746138 | MS.gene48414:CDS |
| CAGCAAAGGCAATAATACCA+AGG | 0.642606 | 3.1:-79743667 | None:intergenic |
| AGTGAAAATGGAATCCCCAA+AGG | 0.643663 | 3.1:-79747818 | None:intergenic |
| GATGCTCAAACCCAGAACAT+GGG | 0.655040 | 3.1:+79748069 | MS.gene48414:CDS |
| TATTAGAGGTGATGATCGTG+AGG | 0.660808 | 3.1:+79745839 | MS.gene48414:CDS |
| TCACCATTAACTTTATACGG+TGG | 0.661817 | 3.1:-79747883 | None:intergenic |
| AGAAACTACACTATGTGCAG+GGG | 0.663314 | 3.1:-79748190 | None:intergenic |
| AGTACTTTACCTTAACACAA+AGG | 0.665075 | 3.1:-79746920 | None:intergenic |
| GGATTCAAACAAAGATTGAG+GGG | 0.668904 | 3.1:+79745581 | MS.gene48414:CDS |
| GTATAATGATCCATACAACT+CGG | 0.679127 | 3.1:+79745539 | MS.gene48414:CDS |
| AGCAGTTAACCACTTCTGTG+TGG | 0.686421 | 3.1:-79745228 | None:intergenic |
| TGCCAAGGTTGATGAACCTG+TGG | 0.690105 | 3.1:+79747957 | MS.gene48414:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATATTTTATAAA+TGG | + | chr3.1:79744178-79744197 | MS.gene48414:intron | 0.0% |
| !! | AAGAAATAAAGAAATAAAAA+AGG | - | chr3.1:79743762-79743781 | None:intergenic | 10.0% |
| !! | GAAATGAAAAAAAATAAAAA+AGG | - | chr3.1:79743790-79743809 | None:intergenic | 10.0% |
| !!! | AAATAAGTTTAATGTTTTAA+TGG | + | chr3.1:79746452-79746471 | MS.gene48414:intron | 10.0% |
| !!! | AATAAGTTTAATGTTTTAAT+GGG | + | chr3.1:79746453-79746472 | MS.gene48414:intron | 10.0% |
| !!! | ATTATTAGAAAAAAAAGTTT+TGG | + | chr3.1:79746513-79746532 | MS.gene48414:intron | 10.0% |
| !!! | GTTTAAATTTTAATGTTATA+TGG | + | chr3.1:79744677-79744696 | MS.gene48414:intron | 10.0% |
| !! | AAAGTTCATTTAATTGATAA+TGG | - | chr3.1:79745425-79745444 | None:intergenic | 15.0% |
| !! | AATAAAGAAATAAAAAAGGT+TGG | - | chr3.1:79743758-79743777 | None:intergenic | 15.0% |
| !! | ATAAAGAAATAAAAAAGGTT+GGG | - | chr3.1:79743757-79743776 | None:intergenic | 15.0% |
| !! | ATATGTAAAAGTTCATTTAA+AGG | - | chr3.1:79745642-79745661 | None:intergenic | 15.0% |
| !! | ATTAAAATTTAAACGTAATC+AGG | - | chr3.1:79744671-79744690 | None:intergenic | 15.0% |
| !! | TTTAGTATTAAATGTGTATT+GGG | + | chr3.1:79744644-79744663 | MS.gene48414:intron | 15.0% |
| !!! | ACTTTTTCTTACAAAATTTA+TGG | - | chr3.1:79745380-79745399 | None:intergenic | 15.0% |
| !!! | ATAAATGAAATCTTACTTTT+AGG | - | chr3.1:79744397-79744416 | None:intergenic | 15.0% |
| !!! | TAAATGAAATCTTACTTTTA+GGG | - | chr3.1:79744396-79744415 | None:intergenic | 15.0% |
| !!! | TAAATGAACTTTTACATATA+AGG | + | chr3.1:79745643-79745662 | MS.gene48414:intron | 15.0% |
| !!! | TGTTTTTTTACATTTGTAAA+AGG | - | chr3.1:79747453-79747472 | None:intergenic | 15.0% |
| !!! | TTTTAGTATTAAATGTGTAT+TGG | + | chr3.1:79744643-79744662 | MS.gene48414:intron | 15.0% |
| !! | AATTAATCTAGACAAGTAAT+GGG | + | chr3.1:79744362-79744381 | MS.gene48414:intron | 20.0% |
| !! | ACTACTGTATTATTATATGT+AGG | - | chr3.1:79747369-79747388 | None:intergenic | 20.0% |
| !! | ATAAATAGGTTAACGATATT+GGG | - | chr3.1:79745092-79745111 | None:intergenic | 20.0% |
| !! | ATCAATTAAATGAACTTTGT+TGG | + | chr3.1:79745427-79745446 | MS.gene48414:intron | 20.0% |
| !! | CAAATAAGAATCACTATAAT+AGG | + | chr3.1:79747288-79747307 | MS.gene48414:intron | 20.0% |
| !! | TAATTAATCTAGACAAGTAA+TGG | + | chr3.1:79744361-79744380 | MS.gene48414:intron | 20.0% |
| !!! | ACTGATAATTAATAATTTGC+CGG | - | chr3.1:79747046-79747065 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTGTGAATATT+CGG | + | chr3.1:79747170-79747189 | MS.gene48414:intron | 20.0% |
| !!! | ATTAGAAAAAAAAGTTTTGG+TGG | + | chr3.1:79746516-79746535 | MS.gene48414:intron | 20.0% |
| !!! | TCATATTTTAATGTGAAAAC+TGG | + | chr3.1:79746035-79746054 | MS.gene48414:intron | 20.0% |
| !!! | TTTTATTACTATGTTAACTG+TGG | - | chr3.1:79746391-79746410 | None:intergenic | 20.0% |
| ! | AAGAAAAAATGATTGACAGA+TGG | + | chr3.1:79745124-79745143 | MS.gene48414:intron | 25.0% |
| ! | AAGAAGAATATTCTCTTCTA+AGG | - | chr3.1:79748337-79748356 | None:intergenic | 25.0% |
| ! | AATATTCTGCATGAAGAAAA+TGG | - | chr3.1:79746074-79746093 | None:intergenic | 25.0% |
| ! | AATCAAAATGCATATGATGT+TGG | + | chr3.1:79747231-79747250 | MS.gene48414:intron | 25.0% |
| ! | ACATTAGATAGGATTAGAAA+TGG | + | chr3.1:79746486-79746505 | MS.gene48414:intron | 25.0% |
| ! | AGAAAAAATGATTGACAGAT+GGG | + | chr3.1:79745125-79745144 | MS.gene48414:intron | 25.0% |
| ! | AGAAGAATATTCTCTTCTAA+GGG | - | chr3.1:79748336-79748355 | None:intergenic | 25.0% |
| ! | AGTCATAAATTTAGCGTTAT+TGG | + | chr3.1:79747577-79747596 | MS.gene48414:intron | 25.0% |
| ! | ATAAGAATCACTATAATAGG+AGG | + | chr3.1:79747291-79747310 | MS.gene48414:intron | 25.0% |
| ! | ATAAGTAACTCAATATTCAC+AGG | - | chr3.1:79747197-79747216 | None:intergenic | 25.0% |
| ! | ATCCACTCATTCAATATAAA+TGG | - | chr3.1:79745565-79745584 | None:intergenic | 25.0% |
| ! | ATTTGTTTCCTTCTTAGATT+AGG | - | chr3.1:79747273-79747292 | None:intergenic | 25.0% |
| ! | CAATAAAGATATTTCCTACT+AGG | - | chr3.1:79746788-79746807 | None:intergenic | 25.0% |
| ! | CAATATCGTTAACCTATTTA+TGG | + | chr3.1:79745091-79745110 | MS.gene48414:intron | 25.0% |
| ! | CATAAATAGGTTAACGATAT+TGG | - | chr3.1:79745093-79745112 | None:intergenic | 25.0% |
| ! | CTGTTTGAATCTTTCTATTA+GGG | + | chr3.1:79745064-79745083 | MS.gene48414:intron | 25.0% |
| ! | GTCATAAATTTAGCGTTATT+GGG | + | chr3.1:79747578-79747597 | MS.gene48414:intron | 25.0% |
| ! | TAAATAGGTTAACGATATTG+GGG | - | chr3.1:79745091-79745110 | None:intergenic | 25.0% |
| ! | TAAGAATCACTATAATAGGA+GGG | + | chr3.1:79747292-79747311 | MS.gene48414:intron | 25.0% |
| ! | TAATCTCTCTTTATGTGATT+TGG | + | chr3.1:79746563-79746582 | MS.gene48414:intron | 25.0% |
| ! | TAGAAGAGAATATTCTTCTT+GGG | + | chr3.1:79748337-79748356 | MS.gene48414:CDS | 25.0% |
| ! | TAGGATTATACTAGACATTT+AGG | + | chr3.1:79744965-79744984 | MS.gene48414:intron | 25.0% |
| ! | TATGGATCATTATACTTGAA+AGG | - | chr3.1:79745534-79745553 | None:intergenic | 25.0% |
| ! | TCTATATGTCAAATGATTGT+GGG | - | chr3.1:79745717-79745736 | None:intergenic | 25.0% |
| ! | TCTGTTTGAATCTTTCTATT+AGG | + | chr3.1:79745063-79745082 | MS.gene48414:intron | 25.0% |
| ! | TCTTCACCATTAACTTTATA+CGG | - | chr3.1:79747889-79747908 | None:intergenic | 25.0% |
| ! | TTAAATGAGATGCCATAAAT+AGG | - | chr3.1:79745106-79745125 | None:intergenic | 25.0% |
| ! | TTAGAAGAGAATATTCTTCT+TGG | + | chr3.1:79748336-79748355 | MS.gene48414:CDS | 25.0% |
| ! | TTATTCTCGTTTAATGAAAC+AGG | + | chr3.1:79747684-79747703 | MS.gene48414:intron | 25.0% |
| ! | TTCTATATGTCAAATGATTG+TGG | - | chr3.1:79745718-79745737 | None:intergenic | 25.0% |
| ! | TTTGTAAGAAAAAGTCTTCT+AGG | + | chr3.1:79745385-79745404 | MS.gene48414:intron | 25.0% |
| !! | AAAGTATCACAAATCAGAAA+AGG | - | chr3.1:79743828-79743847 | None:intergenic | 25.0% |
| !! | ATTTTCAGCCATTATTATTG+TGG | + | chr3.1:79743905-79743924 | MS.gene48414:CDS | 25.0% |
| !! | CTAAATCTGCTTGAATTTTA+CGG | - | chr3.1:79746297-79746316 | None:intergenic | 25.0% |
| !! | TTTCATTTATTGCTTGCTTT+TGG | + | chr3.1:79744407-79744426 | MS.gene48414:intron | 25.0% |
| !! | TTTGAATACACTGTAAGTTT+TGG | + | chr3.1:79744485-79744504 | MS.gene48414:intron | 25.0% |
| !!! | AAGTTTAATGTTTTAATGGG+CGG | + | chr3.1:79746456-79746475 | MS.gene48414:intron | 25.0% |
| !!! | ATCTTACTTTTAGGGTAAAA+AGG | - | chr3.1:79744388-79744407 | None:intergenic | 25.0% |
| !!! | ATTTAATTGATAATGGCTAC+TGG | - | chr3.1:79745418-79745437 | None:intergenic | 25.0% |
| !!! | TTTTTGGGATTTTGTGAAAT+TGG | + | chr3.1:79747134-79747153 | MS.gene48414:intron | 25.0% |
| !!! | TTTTTTAGGTTGCATTGTTT+TGG | - | chr3.1:79748121-79748140 | None:intergenic | 25.0% |
| AAAAAGAACTCTTCCAATTG+AGG | + | chr3.1:79748377-79748396 | MS.gene48414:CDS | 30.0% | |
| AAAGGATCGTTAGTAAGATA+TGG | - | chr3.1:79746847-79746866 | None:intergenic | 30.0% | |
| AATAAAAAAGGTTGGGAAGT+TGG | - | chr3.1:79743750-79743769 | None:intergenic | 30.0% | |
| ACAAGGTCAAAAATTCTTTC+TGG | + | chr3.1:79744727-79744746 | MS.gene48414:CDS | 30.0% | |
| AGAAGAGAATATTCTTCTTG+GGG | + | chr3.1:79748338-79748357 | MS.gene48414:CDS | 30.0% | |
| AGACAGTAGAAAATAAACAG+TGG | - | chr3.1:79745301-79745320 | None:intergenic | 30.0% | |
| AGTACTTTACCTTAACACAA+AGG | - | chr3.1:79746923-79746942 | None:intergenic | 30.0% | |
| ATAGTAGTTACTACCAGTTA+CGG | + | chr3.1:79744554-79744573 | MS.gene48414:intron | 30.0% | |
| ATATCTTACTAACGATCCTT+TGG | + | chr3.1:79746846-79746865 | MS.gene48414:intron | 30.0% | |
| ATCGTAGCATTATTTGTTTC+AGG | + | chr3.1:79744003-79744022 | MS.gene48414:intron | 30.0% | |
| CACAAAACACAATGAATATG+GGG | - | chr3.1:79745349-79745368 | None:intergenic | 30.0% | |
| CATTTGCTTACTGTTTATCA+AGG | + | chr3.1:79744117-79744136 | MS.gene48414:CDS | 30.0% | |
| CCACAAAACACAATGAATAT+GGG | - | chr3.1:79745350-79745369 | None:intergenic | 30.0% | |
| CTAGACTAGAAATTACGATT+AGG | + | chr3.1:79744946-79744965 | MS.gene48414:intron | 30.0% | |
| CTATATGTCAAATGATTGTG+GGG | - | chr3.1:79745716-79745735 | None:intergenic | 30.0% | |
| GTATAATGATCCATACAACT+CGG | + | chr3.1:79745539-79745558 | MS.gene48414:CDS | 30.0% | |
| TAACTATTTCAGCAGTACTT+TGG | - | chr3.1:79744859-79744878 | None:intergenic | 30.0% | |
| TATCAATATCTGCAATCCAA+AGG | - | chr3.1:79746865-79746884 | None:intergenic | 30.0% | |
| TCCACAAAACACAATGAATA+TGG | - | chr3.1:79745351-79745370 | None:intergenic | 30.0% | |
| TCGTAGCATTATTTGTTTCA+GGG | + | chr3.1:79744004-79744023 | MS.gene48414:intron | 30.0% | |
| TGATTATAGCATTGCATTGA+GGG | - | chr3.1:79744266-79744285 | None:intergenic | 30.0% | |
| TGGATTCAAACAAAGATTGA+GGG | + | chr3.1:79745580-79745599 | MS.gene48414:CDS | 30.0% | |
| TTACATTTCTATCAGTCACT+TGG | + | chr3.1:79745941-79745960 | MS.gene48414:CDS | 30.0% | |
| TTACTATGTTAACTGTGGTA+AGG | - | chr3.1:79746386-79746405 | None:intergenic | 30.0% | |
| TTGCAGAATTAATGCAAAGA+AGG | - | chr3.1:79745764-79745783 | None:intergenic | 30.0% | |
| ! | AAAAGTGATGAGAATTTTGC+AGG | + | chr3.1:79747991-79748010 | MS.gene48414:CDS | 30.0% |
| ! | GTTTTCAGCTTAATTCAACA+AGG | + | chr3.1:79744710-79744729 | MS.gene48414:intron | 30.0% |
| ! | TGCAAAATTCTCATCACTTT+TGG | - | chr3.1:79747992-79748011 | None:intergenic | 30.0% |
| ! | TGTATATTTTCTGAACTGTC+CGG | - | chr3.1:79747774-79747793 | None:intergenic | 30.0% |
| ! | TGTGAAAACTTCACATTTTG+AGG | + | chr3.1:79746893-79746912 | MS.gene48414:CDS | 30.0% |
| !! | ATTATTGCCTTTGCTGTTTA+TGG | + | chr3.1:79743674-79743693 | MS.gene48414:CDS | 30.0% |
| !! | GATGTTGGTTTAAATAGTAC+AGG | + | chr3.1:79747246-79747265 | MS.gene48414:intron | 30.0% |
| !! | TAGTCATTTTGCTTAGCATT+TGG | - | chr3.1:79748516-79748535 | None:intergenic | 30.0% |
| !! | TGTACTTGACTTCTGTTTTT+GGG | + | chr3.1:79747119-79747138 | MS.gene48414:intron | 30.0% |
| !! | TTATTGCCTTTGCTGTTTAT+GGG | + | chr3.1:79743675-79743694 | MS.gene48414:CDS | 30.0% |
| !! | TTCATCTTTTTCTAGCATGT+GGG | + | chr3.1:79745798-79745817 | MS.gene48414:intron | 30.0% |
| !! | TTTCATCTTTTTCTAGCATG+TGG | + | chr3.1:79745797-79745816 | MS.gene48414:intron | 30.0% |
| !! | TTTGGGTTGTTATCTATGAT+AGG | + | chr3.1:79746333-79746352 | MS.gene48414:intron | 30.0% |
| !!! | CTTGCTTTTGGTTTTTGAAA+GGG | + | chr3.1:79744419-79744438 | MS.gene48414:intron | 30.0% |
| !!! | GATTTGTGATACTTTTTCAG+AGG | + | chr3.1:79743833-79743852 | MS.gene48414:intron | 30.0% |
| !!! | TCCTGATTTTTTGTATATGC+CGG | + | chr3.1:79747024-79747043 | MS.gene48414:intron | 30.0% |
| !!! | TCTTCTGCAGTTTCTTTTTT+AGG | - | chr3.1:79748135-79748154 | None:intergenic | 30.0% |
| AAAGAAACTGCAGAAGATGT+AGG | + | chr3.1:79748138-79748157 | MS.gene48414:CDS | 35.0% | |
| AAAGTTCCAAGAAGTCAAGA+TGG | - | chr3.1:79747512-79747531 | None:intergenic | 35.0% | |
| AACCATTGACAAGACTAGAT+TGG | + | chr3.1:79746688-79746707 | MS.gene48414:intron | 35.0% | |
| AAGCAATATACACTGCTGTT+TGG | + | chr3.1:79745165-79745184 | MS.gene48414:CDS | 35.0% | |
| AATGAATCCATCTCCTAACT+CGG | + | chr3.1:79748404-79748423 | MS.gene48414:CDS | 35.0% | |
| ACATACATTTCTTGCATCAC+TGG | - | chr3.1:79744765-79744784 | None:intergenic | 35.0% | |
| ACGATCATCACCTCTAATAA+TGG | - | chr3.1:79745838-79745857 | None:intergenic | 35.0% | |
| ACTATAAGAGACCAAAGACT+AGG | - | chr3.1:79744320-79744339 | None:intergenic | 35.0% | |
| ACTTTGGCAGAGAAACATTA+TGG | - | chr3.1:79744843-79744862 | None:intergenic | 35.0% | |
| AGAATCAGTCATTTACTGAC+TGG | - | chr3.1:79747402-79747421 | None:intergenic | 35.0% | |
| AGCAAAGGCAATAATACCAA+GGG | - | chr3.1:79743669-79743688 | None:intergenic | 35.0% | |
| AGCCATTATTATTGTGGACT+GGG | + | chr3.1:79743911-79743930 | MS.gene48414:CDS | 35.0% | |
| AGGTCAAAAATTCTTTCTGG+AGG | + | chr3.1:79744730-79744749 | MS.gene48414:CDS | 35.0% | |
| AGTCAAATGAGAGAATGCTT+TGG | + | chr3.1:79746315-79746334 | MS.gene48414:intron | 35.0% | |
| ATAAGAAACTGCAATTGCCT+CGG | - | chr3.1:79746952-79746971 | None:intergenic | 35.0% | |
| ATATAAATGGCCGAGTTGTA+TGG | - | chr3.1:79745552-79745571 | None:intergenic | 35.0% | |
| ATCTGACTCAGAAATCTCAT+TGG | + | chr3.1:79745907-79745926 | MS.gene48414:CDS | 35.0% | |
| CAAAGAAGGAAATGCATTGA+TGG | - | chr3.1:79745750-79745769 | None:intergenic | 35.0% | |
| CATCAACATTCATGCAACAT+AGG | - | chr3.1:79746414-79746433 | None:intergenic | 35.0% | |
| CTATAAGAGACCAAAGACTA+GGG | - | chr3.1:79744319-79744338 | None:intergenic | 35.0% | |
| CTATGTTGCATGAATGTTGA+TGG | + | chr3.1:79746412-79746431 | MS.gene48414:intron | 35.0% | |
| CTGATTATAGCATTGCATTG+AGG | - | chr3.1:79744267-79744286 | None:intergenic | 35.0% | |
| CTTAGCATTTGGAAATGAAG+AGG | - | chr3.1:79748505-79748524 | None:intergenic | 35.0% | |
| GAACCACCGTATAAAGTTAA+TGG | + | chr3.1:79747880-79747899 | MS.gene48414:CDS | 35.0% | |
| GACTCATGGTTAGTAATAAC+AGG | - | chr3.1:79748225-79748244 | None:intergenic | 35.0% | |
| GATTATAGCATTGCATTGAG+GGG | - | chr3.1:79744265-79744284 | None:intergenic | 35.0% | |
| GCAAGATGAAGAGAAATCTT+CGG | + | chr3.1:79748287-79748306 | MS.gene48414:CDS | 35.0% | |
| GCTAACAAAGATAAGAAGGA+TGG | + | chr3.1:79748474-79748493 | MS.gene48414:CDS | 35.0% | |
| GCTTAAAAGACCACAGATTA+AGG | + | chr3.1:79744522-79744541 | MS.gene48414:intron | 35.0% | |
| GGATTCAAACAAAGATTGAG+GGG | + | chr3.1:79745581-79745600 | MS.gene48414:CDS | 35.0% | |
| GGATTCATTTCTTCCTCAAT+TGG | - | chr3.1:79748393-79748412 | None:intergenic | 35.0% | |
| GGCCATTTATATTGAATGAG+TGG | + | chr3.1:79745560-79745579 | MS.gene48414:CDS | 35.0% | |
| GTCAAATGAGAGAATGCTTT+GGG | + | chr3.1:79746316-79746335 | MS.gene48414:intron | 35.0% | |
| GTGGATTCAAACAAAGATTG+AGG | + | chr3.1:79745579-79745598 | MS.gene48414:CDS | 35.0% | |
| TCACCATTAACTTTATACGG+TGG | - | chr3.1:79747886-79747905 | None:intergenic | 35.0% | |
| TCATCACCTCTAATAATGGT+TGG | - | chr3.1:79745834-79745853 | None:intergenic | 35.0% | |
| TCATTATTCATGGAGTTGCT+AGG | + | chr3.1:79745200-79745219 | MS.gene48414:CDS | 35.0% | |
| TCCTGCTAACAAAGATAAGA+AGG | + | chr3.1:79748470-79748489 | MS.gene48414:CDS | 35.0% | |
| TCCTTCTTATCTTTGTTAGC+AGG | - | chr3.1:79748474-79748493 | None:intergenic | 35.0% | |
| TCTGCATGAAGAAAATGGAA+TGG | - | chr3.1:79746069-79746088 | None:intergenic | 35.0% | |
| TGAATCATGACTAGCAGAAT+AGG | + | chr3.1:79744154-79744173 | MS.gene48414:intron | 35.0% | |
| TGTCTATTGCACGTAATGAT+AGG | + | chr3.1:79746254-79746273 | MS.gene48414:intron | 35.0% | |
| TGTTTGATGTCTTTGATCCA+TGG | + | chr3.1:79746746-79746765 | MS.gene48414:intron | 35.0% | |
| TTCTCGTTTAATGAAACAGG+AGG | + | chr3.1:79747687-79747706 | MS.gene48414:intron | 35.0% | |
| TTCTTATCTTTGTTAGCAGG+AGG | - | chr3.1:79748471-79748490 | None:intergenic | 35.0% | |
| TTGACAGTGAACTTGTGATT+AGG | - | chr3.1:79745876-79745895 | None:intergenic | 35.0% | |
| TTTCTCATGCTTTAACAACC+TGG | + | chr3.1:79745994-79746013 | MS.gene48414:intron | 35.0% | |
| TTTGGCTAAAAATCCTCAAG+TGG | + | chr3.1:79746114-79746133 | MS.gene48414:CDS | 35.0% | |
| ! | AACAAAGATTGAGGGGTATA+AGG | + | chr3.1:79745588-79745607 | MS.gene48414:CDS | 35.0% |
| ! | AGAATATTCTCTTCTAAGGG+AGG | - | chr3.1:79748333-79748352 | None:intergenic | 35.0% |
| ! | AGCAATATACACTGCTGTTT+GGG | + | chr3.1:79745166-79745185 | MS.gene48414:CDS | 35.0% |
| ! | AGGAGAGTATAACGAATAGA+GGG | + | chr3.1:79746620-79746639 | MS.gene48414:intron | 35.0% |
| ! | CCCATATTCATTGTGTTTTG+TGG | + | chr3.1:79745347-79745366 | MS.gene48414:intron | 35.0% |
| ! | CTGTACTTGACTTCTGTTTT+TGG | + | chr3.1:79747118-79747137 | MS.gene48414:intron | 35.0% |
| ! | GACTTGTAAAAAGTGCAATG+AGG | + | chr3.1:79746600-79746619 | MS.gene48414:intron | 35.0% |
| ! | GGAAATGCATTGATGGTAAT+AGG | - | chr3.1:79745743-79745762 | None:intergenic | 35.0% |
| ! | GGTGGTTCTATTAGTAAGAA+CGG | - | chr3.1:79747868-79747887 | None:intergenic | 35.0% |
| ! | GTGGTTCTATTAGTAAGAAC+GGG | - | chr3.1:79747867-79747886 | None:intergenic | 35.0% |
| !! | AACCAATCTAGTCTTGTCAA+TGG | - | chr3.1:79746693-79746712 | None:intergenic | 35.0% |
| !! | AAGTTTTGGTGGCACTTTTT+TGG | + | chr3.1:79746527-79746546 | MS.gene48414:intron | 35.0% |
| !! | ATCTAGTCTTGTCAATGGTT+TGG | - | chr3.1:79746688-79746707 | None:intergenic | 35.0% |
| !! | GGTTTTTGAAAGGGTACAAA+TGG | + | chr3.1:79744428-79744447 | MS.gene48414:intron | 35.0% |
| !! | TCAGAAAAGGTGCTAATTGT+TGG | - | chr3.1:79743815-79743834 | None:intergenic | 35.0% |
| !! | TTATGTGATTTGGTCAAGTG+TGG | + | chr3.1:79746573-79746592 | MS.gene48414:intron | 35.0% |
| !!! | AGTTTTGGTGGCACTTTTTT+GGG | + | chr3.1:79746528-79746547 | MS.gene48414:intron | 35.0% |
| !!! | GCACTTTTTTGGGAAAAAGA+TGG | + | chr3.1:79746538-79746557 | MS.gene48414:intron | 35.0% |
| !!! | GCTTGCTTTTGGTTTTTGAA+AGG | + | chr3.1:79744418-79744437 | MS.gene48414:intron | 35.0% |
| !!! | TTTAGGTTGCATTGTTTTGG+AGG | - | chr3.1:79748118-79748137 | None:intergenic | 35.0% |
| AACATTATGGACACGTCAAG+TGG | - | chr3.1:79744830-79744849 | None:intergenic | 40.0% | |
| AACTATCAGAACCCATGTTC+TGG | - | chr3.1:79748083-79748102 | None:intergenic | 40.0% | |
| AATTTCTGTTGCTCCACTTG+AGG | - | chr3.1:79746130-79746149 | None:intergenic | 40.0% | |
| ACAAAGCAGAAAACCGTAAC+TGG | - | chr3.1:79744570-79744589 | None:intergenic | 40.0% | |
| ACTATCAGAACCCATGTTCT+GGG | - | chr3.1:79748082-79748101 | None:intergenic | 40.0% | |
| ACTGCAGAAGATGTAGGAAA+AGG | + | chr3.1:79748144-79748163 | MS.gene48414:CDS | 40.0% | |
| AGAAACTACACTATGTGCAG+GGG | - | chr3.1:79748193-79748212 | None:intergenic | 40.0% | |
| AGAGAGACCTAGAAAACTAG+AGG | + | chr3.1:79746662-79746681 | MS.gene48414:intron | 40.0% | |
| AGCAACAGAAATTGCACAGA+AGG | + | chr3.1:79746137-79746156 | MS.gene48414:CDS | 40.0% | |
| AGTGAAAATGGAATCCCCAA+AGG | - | chr3.1:79747821-79747840 | None:intergenic | 40.0% | |
| ATGATAGGTTAGTGCGACTA+AGG | + | chr3.1:79746348-79746367 | MS.gene48414:intron | 40.0% | |
| CAATGAGGAAAAAGATGCCA+AGG | + | chr3.1:79747942-79747961 | MS.gene48414:CDS | 40.0% | |
| CAGAAACTACACTATGTGCA+GGG | - | chr3.1:79748194-79748213 | None:intergenic | 40.0% | |
| CAGCAAAGGCAATAATACCA+AGG | - | chr3.1:79743670-79743689 | None:intergenic | 40.0% | |
| CAGCCATTATTATTGTGGAC+TGG | + | chr3.1:79743910-79743929 | MS.gene48414:CDS | 40.0% | |
| CCTCGGAAAATATACCCTTT+GGG | + | chr3.1:79747803-79747822 | MS.gene48414:CDS | 40.0% | |
| CTCAATCCCATAAACAGCAA+AGG | - | chr3.1:79743684-79743703 | None:intergenic | 40.0% | |
| CTCGGAAAATATACCCTTTG+GGG | + | chr3.1:79747804-79747823 | MS.gene48414:CDS | 40.0% | |
| GAGGCAATTGCAGTTTCTTA+TGG | + | chr3.1:79746951-79746970 | MS.gene48414:intron | 40.0% | |
| GCAACAGAAATTGCACAGAA+GGG | + | chr3.1:79746138-79746157 | MS.gene48414:CDS | 40.0% | |
| GCATCAGAAATTGTTTGACC+AGG | - | chr3.1:79746015-79746034 | None:intergenic | 40.0% | |
| GCATTTGGAAATGAAGAGGT+TGG | - | chr3.1:79748501-79748520 | None:intergenic | 40.0% | |
| GCCGGCATATACAAAAAATC+AGG | - | chr3.1:79747028-79747047 | None:intergenic | 40.0% | |
| GTACAGGTCCTAATCTAAGA+AGG | + | chr3.1:79747262-79747281 | MS.gene48414:intron | 40.0% | |
| GTGAAAATGGAATCCCCAAA+GGG | - | chr3.1:79747820-79747839 | None:intergenic | 40.0% | |
| TAAGAAACTGCAATTGCCTC+GGG | - | chr3.1:79746951-79746970 | None:intergenic | 40.0% | |
| TACTAACCATGAGTCTAGCA+GGG | + | chr3.1:79748230-79748249 | MS.gene48414:CDS | 40.0% | |
| TAGAGGGCTGTCTAATAGTT+AGG | + | chr3.1:79746636-79746655 | MS.gene48414:intron | 40.0% | |
| TATGTGCCATCTTGACTTCT+TGG | + | chr3.1:79747503-79747522 | MS.gene48414:intron | 40.0% | |
| TATTAGAGGTGATGATCGTG+AGG | + | chr3.1:79745839-79745858 | MS.gene48414:CDS | 40.0% | |
| TATTGTAGCTGATATGCGCA+AGG | + | chr3.1:79746090-79746109 | MS.gene48414:CDS | 40.0% | |
| TCAGAAACTACACTATGTGC+AGG | - | chr3.1:79748195-79748214 | None:intergenic | 40.0% | |
| TCCATCTAGTGTAAACTCCA+AGG | + | chr3.1:79748026-79748045 | MS.gene48414:CDS | 40.0% | |
| TCCTTGGAGTTTACACTAGA+TGG | - | chr3.1:79748030-79748049 | None:intergenic | 40.0% | |
| TGGTCACCAACCATTATTAG+AGG | + | chr3.1:79745825-79745844 | MS.gene48414:CDS | 40.0% | |
| TTACTAACCATGAGTCTAGC+AGG | + | chr3.1:79748229-79748248 | MS.gene48414:CDS | 40.0% | |
| TTAGTGCGACTAAGGCATAA+GGG | + | chr3.1:79746356-79746375 | MS.gene48414:intron | 40.0% | |
| TTGAGCATCAGACTTTGACT+TGG | - | chr3.1:79748058-79748077 | None:intergenic | 40.0% | |
| TTGCTTTCCCAGCAAAATCA+AGG | - | chr3.1:79745151-79745170 | None:intergenic | 40.0% | |
| ! | ATTGAGGGGTATAAGGTTTC+TGG | + | chr3.1:79745595-79745614 | MS.gene48414:CDS | 40.0% |
| ! | ATTGCACAGAAGGGTCTTTT+TGG | + | chr3.1:79746147-79746166 | MS.gene48414:CDS | 40.0% |
| ! | ATTTTCTGAACTGTCCGGAT+GGG | - | chr3.1:79747769-79747788 | None:intergenic | 40.0% |
| ! | CAACTCTGAGAAGATCCAAA+AGG | - | chr3.1:79747717-79747736 | None:intergenic | 40.0% |
| ! | GAGGAGAGTATAACGAATAG+AGG | + | chr3.1:79746619-79746638 | MS.gene48414:intron | 40.0% |
| ! | GCCATTATTATTGTGGACTG+GGG | + | chr3.1:79743912-79743931 | MS.gene48414:CDS | 40.0% |
| ! | TATTTTCTGAACTGTCCGGA+TGG | - | chr3.1:79747770-79747789 | None:intergenic | 40.0% |
| ! | TCCTGAAAACACAGCTCTAA+AGG | + | chr3.1:79746180-79746199 | MS.gene48414:CDS | 40.0% |
| ! | TGCTGCTGTGTCATTATTCA+TGG | + | chr3.1:79745190-79745209 | MS.gene48414:CDS | 40.0% |
| !! | CTTTGACTTGGACTTATCCT+TGG | - | chr3.1:79748046-79748065 | None:intergenic | 40.0% |
| !! | TGAGGAGTACCTTTGTGTTA+AGG | + | chr3.1:79746911-79746930 | MS.gene48414:CDS | 40.0% |
| !!! | ACCTTTAGAGCTGTGTTTTC+AGG | - | chr3.1:79746184-79746203 | None:intergenic | 40.0% |
| AACTTTCATGCTCCCTTGCA+GGG | + | chr3.1:79747526-79747545 | MS.gene48414:intron | 45.0% | |
| AAGGCAAAGATACCAAACCG+TGG | - | chr3.1:79747434-79747453 | None:intergenic | 45.0% | |
| AATATACAGTGAGCCTGCCT+CGG | + | chr3.1:79747786-79747805 | MS.gene48414:CDS | 45.0% | |
| ACACAGAAGTGGTTAACTGC+TGG | + | chr3.1:79745230-79745249 | MS.gene48414:CDS | 45.0% | |
| ACAGTATTGCTCACTCTTGC+CGG | + | chr3.1:79745263-79745282 | MS.gene48414:CDS | 45.0% | |
| AGACCACAGATTAAGGACGA+TGG | + | chr3.1:79744529-79744548 | MS.gene48414:intron | 45.0% | |
| AGCAGTTAACCACTTCTGTG+TGG | - | chr3.1:79745231-79745250 | None:intergenic | 45.0% | |
| GACCACAGATTAAGGACGAT+GGG | + | chr3.1:79744530-79744549 | MS.gene48414:intron | 45.0% | |
| GATGCTCAAACCCAGAACAT+GGG | + | chr3.1:79748069-79748088 | MS.gene48414:CDS | 45.0% | |
| GCCCCAGTCCACAATAATAA+TGG | - | chr3.1:79743916-79743935 | None:intergenic | 45.0% | |
| GCCTCGGAAAATATACCCTT+TGG | + | chr3.1:79747802-79747821 | MS.gene48414:CDS | 45.0% | |
| GGAGGTTTAACTGCTGATGA+TGG | - | chr3.1:79748315-79748334 | None:intergenic | 45.0% | |
| GTTAGTGCGACTAAGGCATA+AGG | + | chr3.1:79746355-79746374 | MS.gene48414:intron | 45.0% | |
| TACGATCAGTCAACACTGTC+AGG | - | chr3.1:79743989-79744008 | None:intergenic | 45.0% | |
| TAGGTTTCTCCACACAGAAG+TGG | + | chr3.1:79745219-79745238 | MS.gene48414:CDS | 45.0% | |
| TAGTGCGACTAAGGCATAAG+GGG | + | chr3.1:79746357-79746376 | MS.gene48414:intron | 45.0% | |
| TCAACACTGTCAGGCACTTA+CGG | - | chr3.1:79743980-79743999 | None:intergenic | 45.0% | |
| TCTACTTAGCTCAGCCTAGT+AGG | + | chr3.1:79746771-79746790 | MS.gene48414:intron | 45.0% | |
| TGATGCTCAAACCCAGAACA+TGG | + | chr3.1:79748068-79748087 | MS.gene48414:CDS | 45.0% | |
| TGGTTAACTGCTGGTGGTTT+GGG | + | chr3.1:79745239-79745258 | MS.gene48414:CDS | 45.0% | |
| TTCCCATCGTCCTTAATCTG+TGG | - | chr3.1:79744535-79744554 | None:intergenic | 45.0% | |
| ! | ACACTATGTGCAGGGGTTTT+AGG | - | chr3.1:79748186-79748205 | None:intergenic | 45.0% |
| ! | AGATGGGCCTTGATTTTGCT+GGG | + | chr3.1:79745141-79745160 | MS.gene48414:intron | 45.0% |
| ! | AGCTGATATGCGCAAGGTTT+TGG | + | chr3.1:79746096-79746115 | MS.gene48414:CDS | 45.0% |
| ! | CATGGGTTCTGATAGTTCAG+TGG | + | chr3.1:79748086-79748105 | MS.gene48414:CDS | 45.0% |
| ! | GAAACAGGAGGCAATCCTTT+TGG | + | chr3.1:79747699-79747718 | MS.gene48414:intron | 45.0% |
| ! | GGTAAAGTACTACATACCCG+AGG | + | chr3.1:79746932-79746951 | MS.gene48414:intron | 45.0% |
| ! | GTCTGAGATGGCAGGATTAT+TGG | - | chr3.1:79744038-79744057 | None:intergenic | 45.0% |
| ! | TGCTCTGGATCGAGTGAAAA+TGG | - | chr3.1:79747833-79747852 | None:intergenic | 45.0% |
| !! | AAGGGTATATTTTCCGAGGC+AGG | - | chr3.1:79747802-79747821 | None:intergenic | 45.0% |
| !! | AGTTTGCTGTCCAACGGAAT+GGG | + | chr3.1:79748439-79748458 | MS.gene48414:CDS | 45.0% |
| !! | CACAAGAGTTTGCTGTCCAA+CGG | + | chr3.1:79748433-79748452 | MS.gene48414:CDS | 45.0% |
| !! | CCCAAAGGGTATATTTTCCG+AGG | - | chr3.1:79747806-79747825 | None:intergenic | 45.0% |
| !! | TAAGGTTTCTGGCACTGTTG+AGG | + | chr3.1:79745606-79745625 | MS.gene48414:CDS | 45.0% |
| !! | TCTTTTTCTAGCATGTGGGC+TGG | + | chr3.1:79745802-79745821 | MS.gene48414:intron | 45.0% |
| !!! | ACTCTTTTTTCACCCCTGCA+AGG | - | chr3.1:79747542-79747561 | None:intergenic | 45.0% |
| !!! | CTCTTTTTTCACCCCTGCAA+GGG | - | chr3.1:79747541-79747560 | None:intergenic | 45.0% |
| !!! | GGTTTGGCCTCTAGTTTTCT+AGG | - | chr3.1:79746672-79746691 | None:intergenic | 45.0% |
| !!! | AGTTATTTTTATTTATTAAA+TGG | + | chr3.1:79745685-79745704 | MS.gene48414:intron | 5.0% |
| !!! | ATTAAACTTATTTTTTTAAA+AGG | - | chr3.1:79746445-79746464 | None:intergenic | 5.0% |
| !!! | GTTATTTTTATTTATTAAAT+GGG | + | chr3.1:79745686-79745705 | MS.gene48414:intron | 5.0% |
| AAGATACCAAACCGTGGTCG+TGG | - | chr3.1:79747428-79747447 | None:intergenic | 50.0% | |
| ACTTTCATGCTCCCTTGCAG+GGG | + | chr3.1:79747527-79747546 | MS.gene48414:intron | 50.0% | |
| ATCCTGCTGAGACGAAGTAG+TGG | - | chr3.1:79743707-79743726 | None:intergenic | 50.0% | |
| CAACACTGTCAGGCACTTAC+GGG | - | chr3.1:79743979-79743998 | None:intergenic | 50.0% | |
| CAGAAGTGGTTAACTGCTGG+TGG | + | chr3.1:79745233-79745252 | MS.gene48414:CDS | 50.0% | |
| CTTCTTGGGGTTGCACTTGA+AGG | + | chr3.1:79748351-79748370 | MS.gene48414:CDS | 50.0% | |
| GAACTTTCATGCTCCCTTGC+AGG | + | chr3.1:79747525-79747544 | MS.gene48414:intron | 50.0% | |
| GACCAAAGACTAGGGACAGA+AGG | - | chr3.1:79744311-79744330 | None:intergenic | 50.0% | |
| GCGGCTGCACAACATTAGAT+AGG | + | chr3.1:79746475-79746494 | MS.gene48414:intron | 50.0% | |
| GCTGAGCTAAGTAGACTCCA+TGG | - | chr3.1:79746766-79746785 | None:intergenic | 50.0% | |
| GTGGTTAACTGCTGGTGGTT+TGG | + | chr3.1:79745238-79745257 | MS.gene48414:CDS | 50.0% | |
| TCGTTCAACTCGTGGCAATG+AGG | + | chr3.1:79747927-79747946 | MS.gene48414:CDS | 50.0% | |
| TCTTGTGACTCAGCCGAGTT+AGG | - | chr3.1:79748420-79748439 | None:intergenic | 50.0% | |
| TGCCACAGGTTCATCAACCT+TGG | - | chr3.1:79747962-79747981 | None:intergenic | 50.0% | |
| TTCAGAGGACTGACAGCAGT+TGG | + | chr3.1:79743848-79743867 | MS.gene48414:intron | 50.0% | |
| TTGTCAGTCATCATCGAGCC+CGG | + | chr3.1:79747734-79747753 | MS.gene48414:CDS | 50.0% | |
| ! | CAGATGGGCCTTGATTTTGC+TGG | + | chr3.1:79745140-79745159 | MS.gene48414:intron | 50.0% |
| ! | CCACGAGTTGAACGAGTTGA+CGG | - | chr3.1:79747922-79747941 | None:intergenic | 50.0% |
| ! | CTCCTTCTGTCCCTAGTCTT+TGG | + | chr3.1:79744306-79744325 | MS.gene48414:intron | 50.0% |
| !! | ACGACCTGACTAGTCTGAGA+TGG | - | chr3.1:79744050-79744069 | None:intergenic | 50.0% |
| !! | GAGTTTGCTGTCCAACGGAA+TGG | + | chr3.1:79748438-79748457 | MS.gene48414:CDS | 50.0% |
| !! | TGCCAAGGTTGATGAACCTG+TGG | + | chr3.1:79747957-79747976 | MS.gene48414:CDS | 50.0% |
| !!! | CTTTTGGAGTCTGATGCCAC+AGG | - | chr3.1:79747976-79747995 | None:intergenic | 50.0% |
| !!! | TGTGCAGGGGTTTTAGGTAC+AGG | - | chr3.1:79748180-79748199 | None:intergenic | 50.0% |
| !!! | TTTTCTAGCATGTGGGCTGG+TGG | + | chr3.1:79745805-79745824 | MS.gene48414:intron | 50.0% |
| ACAGTGGTGTACCTCTCGAC+CGG | - | chr3.1:79745285-79745304 | None:intergenic | 55.0% | |
| AGCCACTACTTCGTCTCAGC+AGG | + | chr3.1:79743702-79743721 | MS.gene48414:CDS | 55.0% | |
| CCGTCAACTCGTTCAACTCG+TGG | + | chr3.1:79747919-79747938 | MS.gene48414:CDS | 55.0% | |
| CTGATTCTCAGCCACGACCA+CGG | + | chr3.1:79747414-79747433 | MS.gene48414:intron | 55.0% | |
| CTGGGGCAATGCTCATATGC+AGG | + | chr3.1:79743929-79743948 | MS.gene48414:CDS | 55.0% | |
| GACTCAGCCGAGTTAGGAGA+TGG | - | chr3.1:79748414-79748433 | None:intergenic | 55.0% | |
| GAGGTCCATTCCCATTCCGT+TGG | - | chr3.1:79748452-79748471 | None:intergenic | 55.0% | |
| GCTGTCCAACGGAATGGGAA+TGG | + | chr3.1:79748444-79748463 | MS.gene48414:CDS | 55.0% | |
| TGTCTGCCCTGCTAGACTCA+TGG | - | chr3.1:79748239-79748258 | None:intergenic | 55.0% | |
| ! | CCTGCCATCTCAGACTAGTC+AGG | + | chr3.1:79744043-79744062 | MS.gene48414:CDS | 55.0% |
| !! | CCTGACTAGTCTGAGATGGC+AGG | - | chr3.1:79744046-79744065 | None:intergenic | 55.0% |
| CTGAACTGTCCGGATGGGAG+TGG | - | chr3.1:79747764-79747783 | None:intergenic | 60.0% | |
| TCCGGATGGGAGTGGCTAAC+CGG | - | chr3.1:79747756-79747775 | None:intergenic | 60.0% | |
| TCTCAGCCACGACCACGGTT+TGG | + | chr3.1:79747419-79747438 | MS.gene48414:intron | 60.0% | |
| CCGGATGGGAGTGGCTAACC+GGG | - | chr3.1:79747755-79747774 | None:intergenic | 65.0% | |
| CGGGCGATTCACTGCTGCTC+TGG | - | chr3.1:79747848-79747867 | None:intergenic | 65.0% | |
| GCTCACTCTTGCCGGTCGAG+AGG | + | chr3.1:79745271-79745290 | MS.gene48414:CDS | 65.0% | |
| ! | CCCGGTTAGCCACTCCCATC+CGG | + | chr3.1:79747752-79747771 | MS.gene48414:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 79743666 | 79748536 | 79743666 | ID=MS.gene48414 |
| chr3.1 | mRNA | 79743666 | 79748536 | 79743666 | ID=MS.gene48414.t1;Parent=MS.gene48414 |
| chr3.1 | exon | 79743666 | 79743739 | 79743666 | ID=MS.gene48414.t1.exon1;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79743666 | 79743739 | 79743666 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79743853 | 79743950 | 79743853 | ID=MS.gene48414.t1.exon2;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79743853 | 79743950 | 79743853 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79744025 | 79744138 | 79744025 | ID=MS.gene48414.t1.exon3;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79744025 | 79744138 | 79744025 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79744718 | 79744778 | 79744718 | ID=MS.gene48414.t1.exon4;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79744718 | 79744778 | 79744718 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79745143 | 79745292 | 79745143 | ID=MS.gene48414.t1.exon5;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79745143 | 79745292 | 79745143 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79745517 | 79745627 | 79745517 | ID=MS.gene48414.t1.exon6;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79745517 | 79745627 | 79745517 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79745813 | 79745980 | 79745813 | ID=MS.gene48414.t1.exon7;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79745813 | 79745980 | 79745813 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79746088 | 79746201 | 79746088 | ID=MS.gene48414.t1.exon8;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79746088 | 79746201 | 79746088 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79746876 | 79746932 | 79746876 | ID=MS.gene48414.t1.exon9;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79746876 | 79746932 | 79746876 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| chr3.1 | exon | 79747706 | 79748536 | 79747706 | ID=MS.gene48414.t1.exon10;Parent=MS.gene48414.t1 |
| chr3.1 | CDS | 79747706 | 79748536 | 79747706 | ID=cds.MS.gene48414.t1;Parent=MS.gene48414.t1 |
| Gene Sequence |
| Protein sequence |
