Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052155.t1 | KEH35729.1 | 99.2 | 476 | 4 | 0 | 1 | 476 | 78 | 553 | 2.90E-243 | 850.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052155.t1 | Q56X46 | 58.4 | 473 | 159 | 7 | 1 | 472 | 232 | 667 | 2.0e-136 | 487.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052155.t1 | A0A072V133 | 99.2 | 476 | 4 | 0 | 1 | 476 | 78 | 553 | 2.1e-243 | 850.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049227 | MS.gene052155 | -0.812017 | 5.24E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene052155 | -0.829271 | 5.65E-55 | -1.69E-46 |
| MS.gene052153 | MS.gene052155 | 0.938103 | 1.17E-98 | -1.69E-46 |
| MS.gene052155 | MS.gene052514 | -0.813226 | 2.85E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene053143 | -0.809714 | 1.65E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene053144 | -0.832378 | 9.78E-56 | -1.69E-46 |
| MS.gene052155 | MS.gene053536 | -0.811296 | 7.52E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene053538 | -0.804504 | 2.09E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene054584 | -0.810037 | 1.41E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene05894 | -0.829647 | 4.58E-55 | -1.69E-46 |
| MS.gene052155 | MS.gene059778 | -0.806594 | 7.63E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene061773 | -0.804635 | 1.97E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene062184 | -0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene06341 | -0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene064425 | -0.800428 | 1.45E-48 | -1.69E-46 |
| MS.gene052155 | MS.gene066010 | -0.802722 | 4.90E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene066196 | -0.80883 | 2.55E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene067770 | -0.80633 | 8.67E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene06793 | -0.817871 | 2.63E-52 | -1.69E-46 |
| MS.gene052155 | MS.gene07723 | -0.823102 | 1.66E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene09934 | -0.800897 | 1.16E-48 | -1.69E-46 |
| MS.gene052155 | MS.gene21085 | -0.853492 | 2.31E-61 | -1.69E-46 |
| MS.gene052155 | MS.gene22470 | -0.811409 | 7.10E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene23902 | -0.804934 | 1.70E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene24633 | -0.802515 | 5.41E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene25237 | -0.820661 | 6.10E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene26380 | -0.804632 | 1.97E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene26387 | -0.837166 | 6.10E-57 | -1.69E-46 |
| MS.gene052155 | MS.gene26464 | -0.801804 | 7.57E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene26465 | -0.817521 | 3.16E-52 | -1.69E-46 |
| MS.gene052155 | MS.gene26855 | -0.848206 | 7.10E-60 | -1.69E-46 |
| MS.gene052155 | MS.gene26945 | -0.813769 | 2.16E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene27038 | -0.823662 | 1.23E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene27039 | -0.820218 | 7.71E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene27119 | -0.807782 | 4.27E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene27330 | -0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene27646 | 0.825313 | 5.02E-54 | -1.69E-46 |
| MS.gene052155 | MS.gene29082 | -0.800331 | 1.52E-48 | -1.69E-46 |
| MS.gene052155 | MS.gene32028 | -0.813598 | 2.36E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene34286 | -0.825963 | 3.52E-54 | -1.69E-46 |
| MS.gene052155 | MS.gene36285 | -0.812643 | 3.82E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene37927 | 0.979619 | 2.28E-148 | -1.69E-46 |
| MS.gene052155 | MS.gene38303 | -0.82549 | 4.56E-54 | -1.69E-46 |
| MS.gene052155 | MS.gene39297 | -0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene40949 | -0.804236 | 2.38E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene43740 | -0.826108 | 3.25E-54 | -1.69E-46 |
| MS.gene052155 | MS.gene44844 | -0.820536 | 6.51E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene45937 | -0.80485 | 1.77E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene47601 | -0.820439 | 6.85E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene48408 | 0.939067 | 2.36E-99 | -1.69E-46 |
| MS.gene052155 | MS.gene48409 | 0.851815 | 6.94E-61 | -1.69E-46 |
| MS.gene052155 | MS.gene48412 | 0.976303 | 1.44E-141 | -1.69E-46 |
| MS.gene052155 | MS.gene48414 | 0.910142 | 2.61E-82 | -1.69E-46 |
| MS.gene052155 | MS.gene48519 | -0.806425 | 8.28E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene49754 | -0.832733 | 7.99E-56 | -1.69E-46 |
| MS.gene052155 | MS.gene51910 | -0.802804 | 4.71E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene51947 | -0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene55101 | -0.837138 | 6.20E-57 | -1.69E-46 |
| MS.gene052155 | MS.gene55785 | 0.803563 | 3.28E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene59222 | 0.819084 | 1.40E-52 | -1.69E-46 |
| MS.gene052155 | MS.gene60687 | 0.834399 | 3.07E-56 | -1.69E-46 |
| MS.gene052155 | MS.gene65139 | -0.81423 | 1.71E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene70129 | -0.815369 | 9.58E-52 | -1.69E-46 |
| MS.gene052155 | MS.gene71891 | 0.807307 | 5.39E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene72487 | -0.812479 | 4.15E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene74235 | -0.800895 | 1.16E-48 | -1.69E-46 |
| MS.gene052155 | MS.gene76518 | -0.801656 | 8.12E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene77197 | -0.851363 | 9.32E-61 | -1.69E-46 |
| MS.gene052155 | MS.gene80266 | -0.824695 | 7.02E-54 | -1.69E-46 |
| MS.gene052155 | MS.gene80916 | -0.820813 | 5.62E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene82993 | -0.823743 | 1.17E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene84657 | -0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene86799 | -0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene88032 | -0.823152 | 1.62E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene88927 | -0.812176 | 4.84E-51 | -1.69E-46 |
| MS.gene052155 | MS.gene90465 | -0.80194 | 7.10E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene90536 | 0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene052155 | MS.gene90654 | -0.80803 | 3.78E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene90880 | -0.810005 | 1.43E-50 | -1.69E-46 |
| MS.gene052155 | MS.gene91820 | -0.830701 | 2.53E-55 | -1.69E-46 |
| MS.gene052155 | MS.gene92358 | -0.803838 | 2.88E-49 | -1.69E-46 |
| MS.gene052155 | MS.gene98262 | -0.822655 | 2.11E-53 | -1.69E-46 |
| MS.gene052155 | MS.gene99878 | -0.815053 | 1.13E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052155.t1 | MTR_3g100280 | 99.160 | 476 | 4 | 0 | 1 | 476 | 78 | 553 | 0.0 | 972 |
| MS.gene052155.t1 | MTR_3g100280 | 99.160 | 476 | 4 | 0 | 1 | 476 | 241 | 716 | 0.0 | 972 |
| MS.gene052155.t1 | MTR_5g032090 | 58.351 | 485 | 165 | 9 | 1 | 460 | 229 | 701 | 0.0 | 543 |
| MS.gene052155.t1 | MTR_3g100320 | 68.895 | 344 | 97 | 3 | 1 | 340 | 232 | 569 | 3.10e-166 | 482 |
| MS.gene052155.t1 | MTR_3g100320 | 77.473 | 182 | 41 | 0 | 1 | 182 | 244 | 425 | 1.28e-104 | 318 |
| MS.gene052155.t1 | MTR_3g100300 | 34.256 | 289 | 78 | 11 | 78 | 356 | 133 | 319 | 9.11e-24 | 102 |
| MS.gene052155.t1 | MTR_3g099260 | 42.697 | 89 | 48 | 2 | 101 | 189 | 76 | 161 | 1.61e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052155.t1 | AT5G10490 | 60.842 | 475 | 144 | 9 | 1 | 472 | 232 | 667 | 0.0 | 538 |
| MS.gene052155.t1 | AT5G10490 | 60.842 | 475 | 144 | 9 | 1 | 472 | 204 | 639 | 0.0 | 537 |
| MS.gene052155.t1 | AT5G10490 | 60.842 | 475 | 144 | 9 | 1 | 472 | 230 | 665 | 0.0 | 537 |
| MS.gene052155.t1 | AT1G58200 | 57.675 | 456 | 171 | 9 | 1 | 448 | 234 | 675 | 4.03e-176 | 510 |
| MS.gene052155.t1 | AT1G58200 | 57.675 | 456 | 171 | 9 | 1 | 448 | 234 | 675 | 4.03e-176 | 510 |
| MS.gene052155.t1 | AT4G00290 | 26.291 | 213 | 141 | 6 | 16 | 220 | 286 | 490 | 8.81e-12 | 67.8 |
Find 108 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATTCTCATCACTTT+TGG | 0.160964 | 3.2:-83579405 | None:intergenic |
| ATTGAGGGGTATGAGGTTTC+TGG | 0.210367 | 3.2:+83577011 | MS.gene052155:CDS |
| TCTTCACCATTAACTTTATA+CGG | 0.230735 | 3.2:-83579302 | None:intergenic |
| TCCTTGGAGTTTACACTAGA+TGG | 0.266948 | 3.2:-83579443 | None:intergenic |
| AAGAAGAATATTCTCTTCTA+AGG | 0.269634 | 3.2:-83579750 | None:intergenic |
| ATCCACTCATTCAATATAAA+TGG | 0.277217 | 3.2:-83576978 | None:intergenic |
| GAACCACCGTATAAAGTTAA+TGG | 0.285284 | 3.2:+83579296 | MS.gene052155:CDS |
| AGCTGATATGCGCAAGGTTT+TGG | 0.309117 | 3.2:+83577512 | MS.gene052155:CDS |
| TGCTGCTGTGTCATTATTCA+TGG | 0.310689 | 3.2:+83576606 | MS.gene052155:CDS |
| TGGTTAACTGCTGGTGGTTT+GGG | 0.312167 | 3.2:+83576655 | MS.gene052155:CDS |
| TTAGAAGAGAATATTCTTCT+TGG | 0.319652 | 3.2:+83579752 | MS.gene052155:CDS |
| AACTATCAGAACCCATGTTC+TGG | 0.320526 | 3.2:-83579496 | None:intergenic |
| CTTCTTGGGGTTGCACTTGA+AGG | 0.322534 | 3.2:+83579767 | MS.gene052155:CDS |
| TGCTCTGGATCGAGTGAAAA+TGG | 0.324671 | 3.2:-83579246 | None:intergenic |
| GAAACAGGAGGCAATCCTTT+TGG | 0.327663 | 3.2:+83579115 | MS.gene052155:intron |
| TCCGGATGGGAGTGGCTAAC+CGG | 0.331872 | 3.2:-83579169 | None:intergenic |
| TAGAAGAGAATATTCTTCTT+GGG | 0.339763 | 3.2:+83579753 | MS.gene052155:CDS |
| AGCAATATACACTGCTGTTT+GGG | 0.342027 | 3.2:+83576582 | MS.gene052155:CDS |
| AAGCAATATACACTGCTGTT+TGG | 0.345518 | 3.2:+83576581 | MS.gene052155:CDS |
| CGGGCGATTCACTGCTGCTC+TGG | 0.357040 | 3.2:-83579261 | None:intergenic |
| GGATTCATTTCTTCCTCAAT+TGG | 0.382478 | 3.2:-83579806 | None:intergenic |
| CCTCGGAAAATATACCCTTT+GGG | 0.382562 | 3.2:+83579219 | MS.gene052155:CDS |
| ACGATCATCACCTCTAATAA+TGG | 0.384373 | 3.2:-83577251 | None:intergenic |
| GCCTCGGAAAATATACCCTT+TGG | 0.385437 | 3.2:+83579218 | MS.gene052155:CDS |
| TCTTGTGACTCAGCCGAGTT+AGG | 0.388980 | 3.2:-83579833 | None:intergenic |
| ACAGTATTGCTCACTCTTGC+CGG | 0.390378 | 3.2:+83576679 | MS.gene052155:CDS |
| GACTCATGGTTAGTAATAAC+AGG | 0.390821 | 3.2:-83579638 | None:intergenic |
| GTGGTTAACTGCTGGTGGTT+TGG | 0.396659 | 3.2:+83576654 | MS.gene052155:CDS |
| TGAGGAGTACCTTTGTGTTA+AGG | 0.398606 | 3.2:+83578327 | MS.gene052155:CDS |
| TTGACAGTGAACTTGTGATT+AGG | 0.406344 | 3.2:-83577289 | None:intergenic |
| TCCTTCTTATCTTTGTTAGC+AGG | 0.413944 | 3.2:-83579887 | None:intergenic |
| CTTTGACTTGGACTTATCCT+TGG | 0.417001 | 3.2:-83579459 | None:intergenic |
| ATATAAATGGCCGAGTTGTA+TGG | 0.432347 | 3.2:-83576965 | None:intergenic |
| CCACGAGTTGAACGAGTTGA+CGG | 0.433490 | 3.2:-83579335 | None:intergenic |
| AACAAAGATTGAGGGGTATG+AGG | 0.439911 | 3.2:+83577004 | MS.gene052155:CDS |
| ACTATCAGAACCCATGTTCT+GGG | 0.446447 | 3.2:-83579495 | None:intergenic |
| TCCTGAAAACACAGCTCTAA+AGG | 0.450592 | 3.2:+83577596 | MS.gene052155:CDS |
| TTACTAACCATGAGTCTAGC+AGG | 0.459792 | 3.2:+83579645 | MS.gene052155:CDS |
| TCATTATTCATGGAGTTGCT+AGG | 0.467872 | 3.2:+83576616 | MS.gene052155:CDS |
| GCATTTGGAAATGAAGAGGT+TGG | 0.471934 | 3.2:-83579914 | None:intergenic |
| TTGCTTTCCCAGCAAAATCA+AGG | 0.476830 | 3.2:-83576564 | None:intergenic |
| TGGTCACCAACCATTATTAG+AGG | 0.477341 | 3.2:+83577241 | MS.gene052155:CDS |
| CCCGGTTAGCCACTCCCATC+CGG | 0.482156 | 3.2:+83579168 | MS.gene052155:CDS |
| GAGTTTGCTGTCCAACGGAA+TGG | 0.486188 | 3.2:+83579854 | MS.gene052155:CDS |
| TCCTGCTAACAAAGATAAGA+AGG | 0.488760 | 3.2:+83579886 | MS.gene052155:CDS |
| ATCTGACTCAGAAATCTCAT+TGG | 0.494433 | 3.2:+83577323 | MS.gene052155:CDS |
| TATGGATCATTATACTTGAA+AGG | 0.495848 | 3.2:-83576947 | None:intergenic |
| AATTTCTGTTGCTCCACTTG+AGG | 0.495916 | 3.2:-83577543 | None:intergenic |
| ACTGCAGAAGATGTAGGAAA+AGG | 0.496072 | 3.2:+83579560 | MS.gene052155:CDS |
| CCGGATGGGAGTGGCTAACC+GGG | 0.500022 | 3.2:-83579168 | None:intergenic |
| TTCTTATCTTTGTTAGCAGG+AGG | 0.502177 | 3.2:-83579884 | None:intergenic |
| GTGGTTCTATTAGTAAGAAC+GGG | 0.504498 | 3.2:-83579280 | None:intergenic |
| AGTTTGCTGTCCAACGGAAT+GGG | 0.505163 | 3.2:+83579855 | MS.gene052155:CDS |
| TGAGGTTTCTGGCACAGTTG+AGG | 0.511851 | 3.2:+83577022 | MS.gene052155:CDS |
| CAACTCTGAGAAGATCCAAA+AGG | 0.513442 | 3.2:-83579130 | None:intergenic |
| GCTGTCCAACGGAATGGGAA+TGG | 0.514341 | 3.2:+83579860 | MS.gene052155:CDS |
| GGCCATTTATATTGAATGAG+TGG | 0.514735 | 3.2:+83576976 | MS.gene052155:CDS |
| CTGAACTGTCCGGATGGGAG+TGG | 0.519563 | 3.2:-83579177 | None:intergenic |
| TTGAGCATCAGACTTTGACT+TGG | 0.526242 | 3.2:-83579471 | None:intergenic |
| TTACATTTCTATCAGTCACT+TGG | 0.527731 | 3.2:+83577357 | MS.gene052155:CDS |
| GCAAGATGAAGAGAAATCTT+CGG | 0.529586 | 3.2:+83579703 | MS.gene052155:CDS |
| TGGATTCAAACAAAGATTGA+GGG | 0.532585 | 3.2:+83576996 | MS.gene052155:CDS |
| TCAGAAACTACACTATGTGC+AGG | 0.532696 | 3.2:-83579608 | None:intergenic |
| GTGGATTCAAACAAAGATTG+AGG | 0.532984 | 3.2:+83576995 | MS.gene052155:CDS |
| TGATGCTCAAACCCAGAACA+TGG | 0.533483 | 3.2:+83579484 | MS.gene052155:CDS |
| CTCGGAAAATATACCCTTTG+GGG | 0.533597 | 3.2:+83579220 | MS.gene052155:CDS |
| GAGGTCCATTCCCATTCCGT+TGG | 0.538198 | 3.2:-83579865 | None:intergenic |
| AGCAACAGAAATTGCACAGA+AGG | 0.539152 | 3.2:+83577553 | MS.gene052155:CDS |
| CTTAGCATTTGGAAATGAAG+AGG | 0.540708 | 3.2:-83579918 | None:intergenic |
| GACTCAGCCGAGTTAGGAGA+TGG | 0.546014 | 3.2:-83579827 | None:intergenic |
| AAAGAAACTGCAGAAGATGT+AGG | 0.549434 | 3.2:+83579554 | MS.gene052155:CDS |
| TTGTCAGTCATCATCGAGCC+CGG | 0.555870 | 3.2:+83579150 | MS.gene052155:CDS |
| AGAAGAGAATATTCTTCTTG+GGG | 0.555945 | 3.2:+83579754 | MS.gene052155:CDS |
| TGTCTGCCCTGCTAGACTCA+TGG | 0.556999 | 3.2:-83579652 | None:intergenic |
| GTGAAAATGGAATCCCCAAA+GGG | 0.563083 | 3.2:-83579233 | None:intergenic |
| AGAATATTCTCTTCTAAGGG+AGG | 0.566683 | 3.2:-83579746 | None:intergenic |
| TGCCACAGGTTCATCAACCT+TGG | 0.570082 | 3.2:-83579375 | None:intergenic |
| AGAAGAATATTCTCTTCTAA+GGG | 0.571417 | 3.2:-83579749 | None:intergenic |
| GGAGGTTTAACTGCTGATGA+TGG | 0.571460 | 3.2:-83579728 | None:intergenic |
| CACAAGAGTTTGCTGTCCAA+CGG | 0.571868 | 3.2:+83579849 | MS.gene052155:CDS |
| CAGAAACTACACTATGTGCA+GGG | 0.572356 | 3.2:-83579607 | None:intergenic |
| AATATACAGTGAGCCTGCCT+CGG | 0.575648 | 3.2:+83579202 | MS.gene052155:CDS |
| ACACAGAAGTGGTTAACTGC+TGG | 0.580779 | 3.2:+83576646 | MS.gene052155:CDS |
| GCTAACAAAGATAAGAAGGA+TGG | 0.580826 | 3.2:+83579890 | MS.gene052155:CDS |
| GGTGGTTCTATTAGTAAGAA+CGG | 0.584350 | 3.2:-83579281 | None:intergenic |
| ACAGTGGTGTACCTCTCGAC+CGG | 0.589587 | 3.2:-83576698 | None:intergenic |
| TCCATCTAGTGTAAACTCCA+AGG | 0.591305 | 3.2:+83579442 | MS.gene052155:CDS |
| CCGTCAACTCGTTCAACTCG+TGG | 0.592850 | 3.2:+83579335 | MS.gene052155:CDS |
| TCATCACCTCTAATAATGGT+TGG | 0.596112 | 3.2:-83577247 | None:intergenic |
| GCTCACTCTTGCCGGTCGAG+AGG | 0.602784 | 3.2:+83576687 | MS.gene052155:CDS |
| AATGAATCCATCTCCTAACT+CGG | 0.604421 | 3.2:+83579820 | MS.gene052155:CDS |
| TAGGTTTCTCCACACAGAAG+TGG | 0.609034 | 3.2:+83576635 | MS.gene052155:CDS |
| TATTGTAGCTGATATGCGCA+AGG | 0.609834 | 3.2:+83577506 | MS.gene052155:CDS |
| CAGAAGTGGTTAACTGCTGG+TGG | 0.614907 | 3.2:+83576649 | MS.gene052155:CDS |
| TCGTTCAACTCGTGGCAATG+AGG | 0.629437 | 3.2:+83579343 | MS.gene052155:CDS |
| CATGGGTTCTGATAGTTCAG+TGG | 0.631810 | 3.2:+83579502 | MS.gene052155:CDS |
| TACTAACCATGAGTCTAGCA+GGG | 0.636326 | 3.2:+83579646 | MS.gene052155:CDS |
| GCAACAGAAATTGCACAGAA+GGG | 0.640894 | 3.2:+83577554 | MS.gene052155:CDS |
| AGTGAAAATGGAATCCCCAA+AGG | 0.643663 | 3.2:-83579234 | None:intergenic |
| GATGCTCAAACCCAGAACAT+GGG | 0.655040 | 3.2:+83579485 | MS.gene052155:CDS |
| TATTAGAGGTGATGATCGTG+AGG | 0.660808 | 3.2:+83577255 | MS.gene052155:CDS |
| TCACCATTAACTTTATACGG+TGG | 0.661817 | 3.2:-83579299 | None:intergenic |
| AGAAACTACACTATGTGCAG+GGG | 0.663314 | 3.2:-83579606 | None:intergenic |
| AGTACTTTACCTTAACACAA+AGG | 0.665075 | 3.2:-83578336 | None:intergenic |
| GGATTCAAACAAAGATTGAG+GGG | 0.668904 | 3.2:+83576997 | MS.gene052155:CDS |
| GTATAATGATCCATACAACT+CGG | 0.679127 | 3.2:+83576955 | MS.gene052155:CDS |
| AGCAGTTAACCACTTCTGTG+TGG | 0.686421 | 3.2:-83576644 | None:intergenic |
| TGCCAAGGTTGATGAACCTG+TGG | 0.690105 | 3.2:+83579373 | MS.gene052155:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAAGTTTAATGTTTTAA+TGG | + | chr3.2:83577868-83577887 | MS.gene052155:intron | 10.0% |
| !!! | AATAAGTTTAATGTTTTAAT+GGG | + | chr3.2:83577869-83577888 | MS.gene052155:intron | 10.0% |
| !!! | ATTATTAGAAAAAAAAGTTT+TGG | + | chr3.2:83577929-83577948 | MS.gene052155:intron | 10.0% |
| !! | AAAGTTCATTTAATTGATAA+TGG | - | chr3.2:83576841-83576860 | None:intergenic | 15.0% |
| !! | ATATGTAAAAGTTCATTTAA+AGG | - | chr3.2:83577058-83577077 | None:intergenic | 15.0% |
| !!! | ACTTTTTCTTACAAAATTTA+TGG | - | chr3.2:83576796-83576815 | None:intergenic | 15.0% |
| !!! | TAAATGAACTTTTACATATA+AGG | + | chr3.2:83577059-83577078 | MS.gene052155:intron | 15.0% |
| !!! | TGTTTTTTTACATTTGTAAA+AGG | - | chr3.2:83578869-83578888 | None:intergenic | 15.0% |
| !! | AAATATAAGTGGTCTAATTA+AGG | + | chr3.2:83579077-83579096 | MS.gene052155:intron | 20.0% |
| !! | ACTACTGTATTATTATATGT+AGG | - | chr3.2:83578785-83578804 | None:intergenic | 20.0% |
| !! | ATCAATTAAATGAACTTTGT+TGG | + | chr3.2:83576843-83576862 | MS.gene052155:intron | 20.0% |
| !! | CAAATAAGAATCACTATAAT+AGG | + | chr3.2:83578704-83578723 | MS.gene052155:intron | 20.0% |
| !!! | ACTGATAATTAATAATTTGC+CGG | - | chr3.2:83578462-83578481 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTGTGAATATT+CGG | + | chr3.2:83578586-83578605 | MS.gene052155:intron | 20.0% |
| !!! | ATTAGAAAAAAAAGTTTTGG+TGG | + | chr3.2:83577932-83577951 | MS.gene052155:intron | 20.0% |
| !!! | TCATATTTTAATGTGAAAAC+TGG | + | chr3.2:83577451-83577470 | MS.gene052155:intron | 20.0% |
| !!! | TTTTATTACTATGTTAACTG+TGG | - | chr3.2:83577807-83577826 | None:intergenic | 20.0% |
| !!! | TTTTTCCTACTAAATATAAG+TGG | + | chr3.2:83579066-83579085 | MS.gene052155:intron | 20.0% |
| ! | AAGAAGAATATTCTCTTCTA+AGG | - | chr3.2:83579753-83579772 | None:intergenic | 25.0% |
| ! | AATATTCTGCATGAAGAAAA+TGG | - | chr3.2:83577490-83577509 | None:intergenic | 25.0% |
| ! | AATCAAAATGCATATGATGT+TGG | + | chr3.2:83578647-83578666 | MS.gene052155:intron | 25.0% |
| ! | ACATTAGATAGGATTAGAAA+TGG | + | chr3.2:83577902-83577921 | MS.gene052155:intron | 25.0% |
| ! | AGAAGAATATTCTCTTCTAA+GGG | - | chr3.2:83579752-83579771 | None:intergenic | 25.0% |
| ! | AGTCATAAATTTAGCGTTAT+TGG | + | chr3.2:83578993-83579012 | MS.gene052155:intron | 25.0% |
| ! | ATAAGAATCACTATAATAGG+AGG | + | chr3.2:83578707-83578726 | MS.gene052155:intron | 25.0% |
| ! | ATAAGTAACTCAATATTCAC+AGG | - | chr3.2:83578613-83578632 | None:intergenic | 25.0% |
| ! | ATCCACTCATTCAATATAAA+TGG | - | chr3.2:83576981-83577000 | None:intergenic | 25.0% |
| ! | ATTTGTTTCCTTCTTAGATT+AGG | - | chr3.2:83578689-83578708 | None:intergenic | 25.0% |
| ! | CAATAAAGATATTTCCTACT+AGG | - | chr3.2:83578204-83578223 | None:intergenic | 25.0% |
| ! | GTCATAAATTTAGCGTTATT+GGG | + | chr3.2:83578994-83579013 | MS.gene052155:intron | 25.0% |
| ! | TAAGAATCACTATAATAGGA+GGG | + | chr3.2:83578708-83578727 | MS.gene052155:intron | 25.0% |
| ! | TAATCTCTCTTTATGTGATT+TGG | + | chr3.2:83577979-83577998 | MS.gene052155:intron | 25.0% |
| ! | TAGAAGAGAATATTCTTCTT+GGG | + | chr3.2:83579753-83579772 | MS.gene052155:CDS | 25.0% |
| ! | TATGGATCATTATACTTGAA+AGG | - | chr3.2:83576950-83576969 | None:intergenic | 25.0% |
| ! | TCTATATGTCAAATGATTGT+GGG | - | chr3.2:83577133-83577152 | None:intergenic | 25.0% |
| ! | TCTTCACCATTAACTTTATA+CGG | - | chr3.2:83579305-83579324 | None:intergenic | 25.0% |
| ! | TTAGAAGAGAATATTCTTCT+TGG | + | chr3.2:83579752-83579771 | MS.gene052155:CDS | 25.0% |
| ! | TTAGACCACTTATATTTAGT+AGG | - | chr3.2:83579074-83579093 | None:intergenic | 25.0% |
| ! | TTATTCTCGTTTAATGAAAC+AGG | + | chr3.2:83579100-83579119 | MS.gene052155:intron | 25.0% |
| ! | TTCTATATGTCAAATGATTG+TGG | - | chr3.2:83577134-83577153 | None:intergenic | 25.0% |
| ! | TTTGTAAGAAAAAGTCTTCT+AGG | + | chr3.2:83576801-83576820 | MS.gene052155:intron | 25.0% |
| !! | CTAAATCTGCTTGAATTTTA+CGG | - | chr3.2:83577713-83577732 | None:intergenic | 25.0% |
| !!! | AAGTTTAATGTTTTAATGGG+CGG | + | chr3.2:83577872-83577891 | MS.gene052155:intron | 25.0% |
| !!! | ATTTAATTGATAATGGCTAC+TGG | - | chr3.2:83576834-83576853 | None:intergenic | 25.0% |
| !!! | TTTTTGGGATTTTGTGAAAT+TGG | + | chr3.2:83578550-83578569 | MS.gene052155:intron | 25.0% |
| !!! | TTTTTTAGGTTGCATTGTTT+TGG | - | chr3.2:83579537-83579556 | None:intergenic | 25.0% |
| AAAAAGAACTCTTCCAATTG+AGG | + | chr3.2:83579793-83579812 | MS.gene052155:CDS | 30.0% | |
| AAAGGATCGTTAGTAAGATA+TGG | - | chr3.2:83578263-83578282 | None:intergenic | 30.0% | |
| AGAAGAGAATATTCTTCTTG+GGG | + | chr3.2:83579754-83579773 | MS.gene052155:CDS | 30.0% | |
| AGACAGTAGAAAATAAACAG+TGG | - | chr3.2:83576717-83576736 | None:intergenic | 30.0% | |
| AGTACTTTACCTTAACACAA+AGG | - | chr3.2:83578339-83578358 | None:intergenic | 30.0% | |
| ATATCTTACTAACGATCCTT+TGG | + | chr3.2:83578262-83578281 | MS.gene052155:intron | 30.0% | |
| CACAAAACACAATGAATATG+GGG | - | chr3.2:83576765-83576784 | None:intergenic | 30.0% | |
| CCACAAAACACAATGAATAT+GGG | - | chr3.2:83576766-83576785 | None:intergenic | 30.0% | |
| CTATATGTCAAATGATTGTG+GGG | - | chr3.2:83577132-83577151 | None:intergenic | 30.0% | |
| GTATAATGATCCATACAACT+CGG | + | chr3.2:83576955-83576974 | MS.gene052155:CDS | 30.0% | |
| TATCAATATCTGCAATCCAA+AGG | - | chr3.2:83578281-83578300 | None:intergenic | 30.0% | |
| TCCACAAAACACAATGAATA+TGG | - | chr3.2:83576767-83576786 | None:intergenic | 30.0% | |
| TGGATTCAAACAAAGATTGA+GGG | + | chr3.2:83576996-83577015 | MS.gene052155:CDS | 30.0% | |
| TTACATTTCTATCAGTCACT+TGG | + | chr3.2:83577357-83577376 | MS.gene052155:CDS | 30.0% | |
| TTACTATGTTAACTGTGGTA+AGG | - | chr3.2:83577802-83577821 | None:intergenic | 30.0% | |
| TTGCAGAATTAATGCAAAGA+AGG | - | chr3.2:83577180-83577199 | None:intergenic | 30.0% | |
| ! | AAAAGTGATGAGAATTTTGC+AGG | + | chr3.2:83579407-83579426 | MS.gene052155:CDS | 30.0% |
| ! | TGCAAAATTCTCATCACTTT+TGG | - | chr3.2:83579408-83579427 | None:intergenic | 30.0% |
| ! | TGTATATTTTCTGAACTGTC+CGG | - | chr3.2:83579190-83579209 | None:intergenic | 30.0% |
| ! | TGTGAAAACTTCACATTTTG+AGG | + | chr3.2:83578309-83578328 | MS.gene052155:CDS | 30.0% |
| !! | GATGTTGGTTTAAATAGTAC+AGG | + | chr3.2:83578662-83578681 | MS.gene052155:intron | 30.0% |
| !! | TAGTCATTTTGCTTAGCATT+TGG | - | chr3.2:83579932-83579951 | None:intergenic | 30.0% |
| !! | TGTACTTGACTTCTGTTTTT+GGG | + | chr3.2:83578535-83578554 | MS.gene052155:intron | 30.0% |
| !! | TTCATCTTTTTCTAGCATGT+GGG | + | chr3.2:83577214-83577233 | MS.gene052155:intron | 30.0% |
| !! | TTTCATCTTTTTCTAGCATG+TGG | + | chr3.2:83577213-83577232 | MS.gene052155:intron | 30.0% |
| !! | TTTGGGTTGTTATCTATGAT+AGG | + | chr3.2:83577749-83577768 | MS.gene052155:intron | 30.0% |
| !!! | TCCTGATTTTTTGTATATGC+CGG | + | chr3.2:83578440-83578459 | MS.gene052155:intron | 30.0% |
| !!! | TCTTCTGCAGTTTCTTTTTT+AGG | - | chr3.2:83579551-83579570 | None:intergenic | 30.0% |
| AAAGAAACTGCAGAAGATGT+AGG | + | chr3.2:83579554-83579573 | MS.gene052155:CDS | 35.0% | |
| AAAGTTCCAAGAAGTCAAGA+TGG | - | chr3.2:83578928-83578947 | None:intergenic | 35.0% | |
| AACCATTGACAAGACTAGAT+TGG | + | chr3.2:83578104-83578123 | MS.gene052155:intron | 35.0% | |
| AAGCAATATACACTGCTGTT+TGG | + | chr3.2:83576581-83576600 | MS.gene052155:CDS | 35.0% | |
| AATGAATCCATCTCCTAACT+CGG | + | chr3.2:83579820-83579839 | MS.gene052155:CDS | 35.0% | |
| ACGATCATCACCTCTAATAA+TGG | - | chr3.2:83577254-83577273 | None:intergenic | 35.0% | |
| AGAATCAGTCATTTACTGAC+TGG | - | chr3.2:83578818-83578837 | None:intergenic | 35.0% | |
| AGTCAAATGAGAGAATGCTT+TGG | + | chr3.2:83577731-83577750 | MS.gene052155:intron | 35.0% | |
| ATAAGAAACTGCAATTGCCT+CGG | - | chr3.2:83578368-83578387 | None:intergenic | 35.0% | |
| ATATAAATGGCCGAGTTGTA+TGG | - | chr3.2:83576968-83576987 | None:intergenic | 35.0% | |
| ATCTGACTCAGAAATCTCAT+TGG | + | chr3.2:83577323-83577342 | MS.gene052155:CDS | 35.0% | |
| CAAAGAAGGAAATGCATTGA+TGG | - | chr3.2:83577166-83577185 | None:intergenic | 35.0% | |
| CATCAACATTCATGCAACAT+AGG | - | chr3.2:83577830-83577849 | None:intergenic | 35.0% | |
| CTATGTTGCATGAATGTTGA+TGG | + | chr3.2:83577828-83577847 | MS.gene052155:intron | 35.0% | |
| CTTAGCATTTGGAAATGAAG+AGG | - | chr3.2:83579921-83579940 | None:intergenic | 35.0% | |
| GAACCACCGTATAAAGTTAA+TGG | + | chr3.2:83579296-83579315 | MS.gene052155:CDS | 35.0% | |
| GACTCATGGTTAGTAATAAC+AGG | - | chr3.2:83579641-83579660 | None:intergenic | 35.0% | |
| GCAAGATGAAGAGAAATCTT+CGG | + | chr3.2:83579703-83579722 | MS.gene052155:CDS | 35.0% | |
| GCTAACAAAGATAAGAAGGA+TGG | + | chr3.2:83579890-83579909 | MS.gene052155:CDS | 35.0% | |
| GGATTCAAACAAAGATTGAG+GGG | + | chr3.2:83576997-83577016 | MS.gene052155:CDS | 35.0% | |
| GGATTCATTTCTTCCTCAAT+TGG | - | chr3.2:83579809-83579828 | None:intergenic | 35.0% | |
| GGCCATTTATATTGAATGAG+TGG | + | chr3.2:83576976-83576995 | MS.gene052155:CDS | 35.0% | |
| GTCAAATGAGAGAATGCTTT+GGG | + | chr3.2:83577732-83577751 | MS.gene052155:intron | 35.0% | |
| GTGGATTCAAACAAAGATTG+AGG | + | chr3.2:83576995-83577014 | MS.gene052155:CDS | 35.0% | |
| TCACCATTAACTTTATACGG+TGG | - | chr3.2:83579302-83579321 | None:intergenic | 35.0% | |
| TCATCACCTCTAATAATGGT+TGG | - | chr3.2:83577250-83577269 | None:intergenic | 35.0% | |
| TCATTATTCATGGAGTTGCT+AGG | + | chr3.2:83576616-83576635 | MS.gene052155:CDS | 35.0% | |
| TCCTGCTAACAAAGATAAGA+AGG | + | chr3.2:83579886-83579905 | MS.gene052155:CDS | 35.0% | |
| TCCTTCTTATCTTTGTTAGC+AGG | - | chr3.2:83579890-83579909 | None:intergenic | 35.0% | |
| TCTGCATGAAGAAAATGGAA+TGG | - | chr3.2:83577485-83577504 | None:intergenic | 35.0% | |
| TGTCTATTGCACGTAATGAT+AGG | + | chr3.2:83577670-83577689 | MS.gene052155:intron | 35.0% | |
| TGTTTGATGTCTTTGATCCA+TGG | + | chr3.2:83578162-83578181 | MS.gene052155:intron | 35.0% | |
| TTCTCGTTTAATGAAACAGG+AGG | + | chr3.2:83579103-83579122 | MS.gene052155:intron | 35.0% | |
| TTCTTATCTTTGTTAGCAGG+AGG | - | chr3.2:83579887-83579906 | None:intergenic | 35.0% | |
| TTGACAGTGAACTTGTGATT+AGG | - | chr3.2:83577292-83577311 | None:intergenic | 35.0% | |
| TTTCTCATGCTTTAACAACC+TGG | + | chr3.2:83577410-83577429 | MS.gene052155:intron | 35.0% | |
| TTTGGCTAAAAATCCTCAAG+TGG | + | chr3.2:83577530-83577549 | MS.gene052155:CDS | 35.0% | |
| ! | AGAATATTCTCTTCTAAGGG+AGG | - | chr3.2:83579749-83579768 | None:intergenic | 35.0% |
| ! | AGCAATATACACTGCTGTTT+GGG | + | chr3.2:83576582-83576601 | MS.gene052155:CDS | 35.0% |
| ! | AGGAGAGTATATCGAATAGA+GGG | + | chr3.2:83578036-83578055 | MS.gene052155:intron | 35.0% |
| ! | CCCATATTCATTGTGTTTTG+TGG | + | chr3.2:83576763-83576782 | MS.gene052155:intron | 35.0% |
| ! | CTGTACTTGACTTCTGTTTT+TGG | + | chr3.2:83578534-83578553 | MS.gene052155:intron | 35.0% |
| ! | GACTTGTAAAAAGTGCAATG+AGG | + | chr3.2:83578016-83578035 | MS.gene052155:intron | 35.0% |
| ! | GGAAATGCATTGATGGTAAT+AGG | - | chr3.2:83577159-83577178 | None:intergenic | 35.0% |
| ! | GGTGGTTCTATTAGTAAGAA+CGG | - | chr3.2:83579284-83579303 | None:intergenic | 35.0% |
| ! | GTGGTTCTATTAGTAAGAAC+GGG | - | chr3.2:83579283-83579302 | None:intergenic | 35.0% |
| !! | AACCAATCTAGTCTTGTCAA+TGG | - | chr3.2:83578109-83578128 | None:intergenic | 35.0% |
| !! | AAGTTTTGGTGGCACTTTTT+TGG | + | chr3.2:83577943-83577962 | MS.gene052155:intron | 35.0% |
| !! | ATCTAGTCTTGTCAATGGTT+TGG | - | chr3.2:83578104-83578123 | None:intergenic | 35.0% |
| !! | TTATGTGATTTGGTCAAGTG+TGG | + | chr3.2:83577989-83578008 | MS.gene052155:intron | 35.0% |
| !!! | AGTTTTGGTGGCACTTTTTT+GGG | + | chr3.2:83577944-83577963 | MS.gene052155:intron | 35.0% |
| !!! | GCACTTTTTTGGGAAAAAGA+TGG | + | chr3.2:83577954-83577973 | MS.gene052155:intron | 35.0% |
| !!! | TTTAGGTTGCATTGTTTTGG+AGG | - | chr3.2:83579534-83579553 | None:intergenic | 35.0% |
| AACTATCAGAACCCATGTTC+TGG | - | chr3.2:83579499-83579518 | None:intergenic | 40.0% | |
| AATTTCTGTTGCTCCACTTG+AGG | - | chr3.2:83577546-83577565 | None:intergenic | 40.0% | |
| ACTATCAGAACCCATGTTCT+GGG | - | chr3.2:83579498-83579517 | None:intergenic | 40.0% | |
| ACTGCAGAAGATGTAGGAAA+AGG | + | chr3.2:83579560-83579579 | MS.gene052155:CDS | 40.0% | |
| AGAAACTACACTATGTGCAG+GGG | - | chr3.2:83579609-83579628 | None:intergenic | 40.0% | |
| AGAGAGACCTAGAAAACTAG+AGG | + | chr3.2:83578078-83578097 | MS.gene052155:intron | 40.0% | |
| AGCAACAGAAATTGCACAGA+AGG | + | chr3.2:83577553-83577572 | MS.gene052155:CDS | 40.0% | |
| AGTGAAAATGGAATCCCCAA+AGG | - | chr3.2:83579237-83579256 | None:intergenic | 40.0% | |
| ATGATAGGTTAGTGCGACTA+AGG | + | chr3.2:83577764-83577783 | MS.gene052155:intron | 40.0% | |
| CAATGAGGAAAAAGATGCCA+AGG | + | chr3.2:83579358-83579377 | MS.gene052155:CDS | 40.0% | |
| CAGAAACTACACTATGTGCA+GGG | - | chr3.2:83579610-83579629 | None:intergenic | 40.0% | |
| CCTCGGAAAATATACCCTTT+GGG | + | chr3.2:83579219-83579238 | MS.gene052155:CDS | 40.0% | |
| CTCGGAAAATATACCCTTTG+GGG | + | chr3.2:83579220-83579239 | MS.gene052155:CDS | 40.0% | |
| GAGGCAATTGCAGTTTCTTA+TGG | + | chr3.2:83578367-83578386 | MS.gene052155:intron | 40.0% | |
| GCAACAGAAATTGCACAGAA+GGG | + | chr3.2:83577554-83577573 | MS.gene052155:CDS | 40.0% | |
| GCATCAGAAATTGTTTGACC+AGG | - | chr3.2:83577431-83577450 | None:intergenic | 40.0% | |
| GCATTTGGAAATGAAGAGGT+TGG | - | chr3.2:83579917-83579936 | None:intergenic | 40.0% | |
| GCCGGCATATACAAAAAATC+AGG | - | chr3.2:83578444-83578463 | None:intergenic | 40.0% | |
| GTACAGGTCCTAATCTAAGA+AGG | + | chr3.2:83578678-83578697 | MS.gene052155:intron | 40.0% | |
| GTGAAAATGGAATCCCCAAA+GGG | - | chr3.2:83579236-83579255 | None:intergenic | 40.0% | |
| TAAGAAACTGCAATTGCCTC+GGG | - | chr3.2:83578367-83578386 | None:intergenic | 40.0% | |
| TACTAACCATGAGTCTAGCA+GGG | + | chr3.2:83579646-83579665 | MS.gene052155:CDS | 40.0% | |
| TAGAGGGCTGTCTAATAGTT+AGG | + | chr3.2:83578052-83578071 | MS.gene052155:intron | 40.0% | |
| TATGTGCCATCTTGACTTCT+TGG | + | chr3.2:83578919-83578938 | MS.gene052155:intron | 40.0% | |
| TATTAGAGGTGATGATCGTG+AGG | + | chr3.2:83577255-83577274 | MS.gene052155:CDS | 40.0% | |
| TATTGTAGCTGATATGCGCA+AGG | + | chr3.2:83577506-83577525 | MS.gene052155:CDS | 40.0% | |
| TCAGAAACTACACTATGTGC+AGG | - | chr3.2:83579611-83579630 | None:intergenic | 40.0% | |
| TCCATCTAGTGTAAACTCCA+AGG | + | chr3.2:83579442-83579461 | MS.gene052155:CDS | 40.0% | |
| TCCTTGGAGTTTACACTAGA+TGG | - | chr3.2:83579446-83579465 | None:intergenic | 40.0% | |
| TGGTCACCAACCATTATTAG+AGG | + | chr3.2:83577241-83577260 | MS.gene052155:CDS | 40.0% | |
| TTACTAACCATGAGTCTAGC+AGG | + | chr3.2:83579645-83579664 | MS.gene052155:CDS | 40.0% | |
| TTAGTGCGACTAAGGCATAA+GGG | + | chr3.2:83577772-83577791 | MS.gene052155:intron | 40.0% | |
| TTGAGCATCAGACTTTGACT+TGG | - | chr3.2:83579474-83579493 | None:intergenic | 40.0% | |
| TTGCTTTCCCAGCAAAATCA+AGG | - | chr3.2:83576567-83576586 | None:intergenic | 40.0% | |
| ! | AACAAAGATTGAGGGGTATG+AGG | + | chr3.2:83577004-83577023 | MS.gene052155:CDS | 40.0% |
| ! | ATTGCACAGAAGGGTCTTTT+TGG | + | chr3.2:83577563-83577582 | MS.gene052155:CDS | 40.0% |
| ! | ATTTTCTGAACTGTCCGGAT+GGG | - | chr3.2:83579185-83579204 | None:intergenic | 40.0% |
| ! | CAACTCTGAGAAGATCCAAA+AGG | - | chr3.2:83579133-83579152 | None:intergenic | 40.0% |
| ! | GAGGAGAGTATATCGAATAG+AGG | + | chr3.2:83578035-83578054 | MS.gene052155:intron | 40.0% |
| ! | TATTTTCTGAACTGTCCGGA+TGG | - | chr3.2:83579186-83579205 | None:intergenic | 40.0% |
| ! | TCCTGAAAACACAGCTCTAA+AGG | + | chr3.2:83577596-83577615 | MS.gene052155:CDS | 40.0% |
| ! | TGCTGCTGTGTCATTATTCA+TGG | + | chr3.2:83576606-83576625 | MS.gene052155:CDS | 40.0% |
| !! | CTTTGACTTGGACTTATCCT+TGG | - | chr3.2:83579462-83579481 | None:intergenic | 40.0% |
| !! | TGAGGAGTACCTTTGTGTTA+AGG | + | chr3.2:83578327-83578346 | MS.gene052155:CDS | 40.0% |
| !!! | ACCTTTAGAGCTGTGTTTTC+AGG | - | chr3.2:83577600-83577619 | None:intergenic | 40.0% |
| AACTTTCATGCTCCCTTGCA+GGG | + | chr3.2:83578942-83578961 | MS.gene052155:intron | 45.0% | |
| AAGGCAAAGATACCAAACCG+TGG | - | chr3.2:83578850-83578869 | None:intergenic | 45.0% | |
| AATATACAGTGAGCCTGCCT+CGG | + | chr3.2:83579202-83579221 | MS.gene052155:CDS | 45.0% | |
| ACACAGAAGTGGTTAACTGC+TGG | + | chr3.2:83576646-83576665 | MS.gene052155:CDS | 45.0% | |
| ACAGTATTGCTCACTCTTGC+CGG | + | chr3.2:83576679-83576698 | MS.gene052155:CDS | 45.0% | |
| AGCAGTTAACCACTTCTGTG+TGG | - | chr3.2:83576647-83576666 | None:intergenic | 45.0% | |
| GATGCTCAAACCCAGAACAT+GGG | + | chr3.2:83579485-83579504 | MS.gene052155:CDS | 45.0% | |
| GCCTCGGAAAATATACCCTT+TGG | + | chr3.2:83579218-83579237 | MS.gene052155:CDS | 45.0% | |
| GGAGGTTTAACTGCTGATGA+TGG | - | chr3.2:83579731-83579750 | None:intergenic | 45.0% | |
| GTTAGTGCGACTAAGGCATA+AGG | + | chr3.2:83577771-83577790 | MS.gene052155:intron | 45.0% | |
| TAGGTTTCTCCACACAGAAG+TGG | + | chr3.2:83576635-83576654 | MS.gene052155:CDS | 45.0% | |
| TAGTGCGACTAAGGCATAAG+GGG | + | chr3.2:83577773-83577792 | MS.gene052155:intron | 45.0% | |
| TCTACTTAGCTCAGCCTAGT+AGG | + | chr3.2:83578187-83578206 | MS.gene052155:intron | 45.0% | |
| TGATGCTCAAACCCAGAACA+TGG | + | chr3.2:83579484-83579503 | MS.gene052155:CDS | 45.0% | |
| TGGTTAACTGCTGGTGGTTT+GGG | + | chr3.2:83576655-83576674 | MS.gene052155:CDS | 45.0% | |
| ! | ACACTATGTGCAGGGGTTTT+AGG | - | chr3.2:83579602-83579621 | None:intergenic | 45.0% |
| ! | AGCTGATATGCGCAAGGTTT+TGG | + | chr3.2:83577512-83577531 | MS.gene052155:CDS | 45.0% |
| ! | ATTGAGGGGTATGAGGTTTC+TGG | + | chr3.2:83577011-83577030 | MS.gene052155:CDS | 45.0% |
| ! | CATGGGTTCTGATAGTTCAG+TGG | + | chr3.2:83579502-83579521 | MS.gene052155:CDS | 45.0% |
| ! | GAAACAGGAGGCAATCCTTT+TGG | + | chr3.2:83579115-83579134 | MS.gene052155:intron | 45.0% |
| ! | GGTAAAGTACTACATACCCG+AGG | + | chr3.2:83578348-83578367 | MS.gene052155:intron | 45.0% |
| ! | TGCTCTGGATCGAGTGAAAA+TGG | - | chr3.2:83579249-83579268 | None:intergenic | 45.0% |
| !! | AAGGGTATATTTTCCGAGGC+AGG | - | chr3.2:83579218-83579237 | None:intergenic | 45.0% |
| !! | AGTTTGCTGTCCAACGGAAT+GGG | + | chr3.2:83579855-83579874 | MS.gene052155:CDS | 45.0% |
| !! | CACAAGAGTTTGCTGTCCAA+CGG | + | chr3.2:83579849-83579868 | MS.gene052155:CDS | 45.0% |
| !! | CCCAAAGGGTATATTTTCCG+AGG | - | chr3.2:83579222-83579241 | None:intergenic | 45.0% |
| !! | TCTTTTTCTAGCATGTGGGC+TGG | + | chr3.2:83577218-83577237 | MS.gene052155:intron | 45.0% |
| !!! | ACTCTTTTTTCACCCCTGCA+AGG | - | chr3.2:83578958-83578977 | None:intergenic | 45.0% |
| !!! | CTCTTTTTTCACCCCTGCAA+GGG | - | chr3.2:83578957-83578976 | None:intergenic | 45.0% |
| !!! | GGTTTGGCCTCTAGTTTTCT+AGG | - | chr3.2:83578088-83578107 | None:intergenic | 45.0% |
| !!! | AGTTATTTTTATTTATTAAA+TGG | + | chr3.2:83577101-83577120 | MS.gene052155:intron | 5.0% |
| !!! | ATTAAACTTATTTTTTTAAA+AGG | - | chr3.2:83577861-83577880 | None:intergenic | 5.0% |
| !!! | GTTATTTTTATTTATTAAAT+GGG | + | chr3.2:83577102-83577121 | MS.gene052155:intron | 5.0% |
| AAGATACCAAACCGTGGTCG+TGG | - | chr3.2:83578844-83578863 | None:intergenic | 50.0% | |
| ACTTTCATGCTCCCTTGCAG+GGG | + | chr3.2:83578943-83578962 | MS.gene052155:intron | 50.0% | |
| CAGAAGTGGTTAACTGCTGG+TGG | + | chr3.2:83576649-83576668 | MS.gene052155:CDS | 50.0% | |
| CTTCTTGGGGTTGCACTTGA+AGG | + | chr3.2:83579767-83579786 | MS.gene052155:CDS | 50.0% | |
| GAACTTTCATGCTCCCTTGC+AGG | + | chr3.2:83578941-83578960 | MS.gene052155:intron | 50.0% | |
| GCGGCTGCACAACATTAGAT+AGG | + | chr3.2:83577891-83577910 | MS.gene052155:intron | 50.0% | |
| GCTGAGCTAAGTAGACTCCA+TGG | - | chr3.2:83578182-83578201 | None:intergenic | 50.0% | |
| GTGGTTAACTGCTGGTGGTT+TGG | + | chr3.2:83576654-83576673 | MS.gene052155:CDS | 50.0% | |
| TCGTTCAACTCGTGGCAATG+AGG | + | chr3.2:83579343-83579362 | MS.gene052155:CDS | 50.0% | |
| TCTTGTGACTCAGCCGAGTT+AGG | - | chr3.2:83579836-83579855 | None:intergenic | 50.0% | |
| TGCCACAGGTTCATCAACCT+TGG | - | chr3.2:83579378-83579397 | None:intergenic | 50.0% | |
| TTGTCAGTCATCATCGAGCC+CGG | + | chr3.2:83579150-83579169 | MS.gene052155:CDS | 50.0% | |
| ! | CCACGAGTTGAACGAGTTGA+CGG | - | chr3.2:83579338-83579357 | None:intergenic | 50.0% |
| !! | GAGTTTGCTGTCCAACGGAA+TGG | + | chr3.2:83579854-83579873 | MS.gene052155:CDS | 50.0% |
| !! | TGAGGTTTCTGGCACAGTTG+AGG | + | chr3.2:83577022-83577041 | MS.gene052155:CDS | 50.0% |
| !! | TGCCAAGGTTGATGAACCTG+TGG | + | chr3.2:83579373-83579392 | MS.gene052155:CDS | 50.0% |
| !!! | CTTTTGGAGTCTGATGCCAC+AGG | - | chr3.2:83579392-83579411 | None:intergenic | 50.0% |
| !!! | TGTGCAGGGGTTTTAGGTAC+AGG | - | chr3.2:83579596-83579615 | None:intergenic | 50.0% |
| !!! | TTTTCTAGCATGTGGGCTGG+TGG | + | chr3.2:83577221-83577240 | MS.gene052155:intron | 50.0% |
| ACAGTGGTGTACCTCTCGAC+CGG | - | chr3.2:83576701-83576720 | None:intergenic | 55.0% | |
| CCGTCAACTCGTTCAACTCG+TGG | + | chr3.2:83579335-83579354 | MS.gene052155:CDS | 55.0% | |
| CTGATTCTCAGCCACGACCA+CGG | + | chr3.2:83578830-83578849 | MS.gene052155:intron | 55.0% | |
| GACTCAGCCGAGTTAGGAGA+TGG | - | chr3.2:83579830-83579849 | None:intergenic | 55.0% | |
| GAGGTCCATTCCCATTCCGT+TGG | - | chr3.2:83579868-83579887 | None:intergenic | 55.0% | |
| GCTGTCCAACGGAATGGGAA+TGG | + | chr3.2:83579860-83579879 | MS.gene052155:CDS | 55.0% | |
| TGTCTGCCCTGCTAGACTCA+TGG | - | chr3.2:83579655-83579674 | None:intergenic | 55.0% | |
| CTGAACTGTCCGGATGGGAG+TGG | - | chr3.2:83579180-83579199 | None:intergenic | 60.0% | |
| TCCGGATGGGAGTGGCTAAC+CGG | - | chr3.2:83579172-83579191 | None:intergenic | 60.0% | |
| TCTCAGCCACGACCACGGTT+TGG | + | chr3.2:83578835-83578854 | MS.gene052155:intron | 60.0% | |
| CCGGATGGGAGTGGCTAACC+GGG | - | chr3.2:83579171-83579190 | None:intergenic | 65.0% | |
| CGGGCGATTCACTGCTGCTC+TGG | - | chr3.2:83579264-83579283 | None:intergenic | 65.0% | |
| GCTCACTCTTGCCGGTCGAG+AGG | + | chr3.2:83576687-83576706 | MS.gene052155:CDS | 65.0% | |
| ! | CCCGGTTAGCCACTCCCATC+CGG | + | chr3.2:83579168-83579187 | MS.gene052155:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 83576559 | 83579952 | 83576559 | ID=MS.gene052155 |
| chr3.2 | mRNA | 83576559 | 83579952 | 83576559 | ID=MS.gene052155.t1;Parent=MS.gene052155 |
| chr3.2 | exon | 83576559 | 83576708 | 83576559 | ID=MS.gene052155.t1.exon1;Parent=MS.gene052155.t1 |
| chr3.2 | CDS | 83576559 | 83576708 | 83576559 | ID=cds.MS.gene052155.t1;Parent=MS.gene052155.t1 |
| chr3.2 | exon | 83576933 | 83577043 | 83576933 | ID=MS.gene052155.t1.exon2;Parent=MS.gene052155.t1 |
| chr3.2 | CDS | 83576933 | 83577043 | 83576933 | ID=cds.MS.gene052155.t1;Parent=MS.gene052155.t1 |
| chr3.2 | exon | 83577229 | 83577396 | 83577229 | ID=MS.gene052155.t1.exon3;Parent=MS.gene052155.t1 |
| chr3.2 | CDS | 83577229 | 83577396 | 83577229 | ID=cds.MS.gene052155.t1;Parent=MS.gene052155.t1 |
| chr3.2 | exon | 83577504 | 83577617 | 83577504 | ID=MS.gene052155.t1.exon4;Parent=MS.gene052155.t1 |
| chr3.2 | CDS | 83577504 | 83577617 | 83577504 | ID=cds.MS.gene052155.t1;Parent=MS.gene052155.t1 |
| chr3.2 | exon | 83578292 | 83578348 | 83578292 | ID=MS.gene052155.t1.exon5;Parent=MS.gene052155.t1 |
| chr3.2 | CDS | 83578292 | 83578348 | 83578292 | ID=cds.MS.gene052155.t1;Parent=MS.gene052155.t1 |
| chr3.2 | exon | 83579122 | 83579952 | 83579122 | ID=MS.gene052155.t1.exon6;Parent=MS.gene052155.t1 |
| chr3.2 | CDS | 83579122 | 83579952 | 83579122 | ID=cds.MS.gene052155.t1;Parent=MS.gene052155.t1 |
| Gene Sequence |
| Protein sequence |
