Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48418.t1 | AES73164.2 | 93.8 | 544 | 34 | 0 | 1 | 544 | 48 | 591 | 9.10E-286 | 992.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48418.t1 | Q8L7W1 | 61.4 | 438 | 167 | 1 | 17 | 454 | 66 | 501 | 2.8e-150 | 533.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48418.t1 | G7J539 | 93.8 | 544 | 34 | 0 | 1 | 544 | 48 | 591 | 6.5e-286 | 992.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052159 | MS.gene48418 | 0.968627 | 6.02E-129 | -1.69E-46 |
| MS.gene059868 | MS.gene48418 | 0.8182 | 2.22E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48418.t1 | MTR_3g100320 | 97.243 | 544 | 15 | 0 | 1 | 544 | 48 | 591 | 0.0 | 1095 |
| MS.gene48418.t1 | MTR_3g100320 | 97.541 | 366 | 9 | 0 | 1 | 366 | 60 | 425 | 0.0 | 745 |
| MS.gene48418.t1 | MTR_3g100280 | 65.318 | 519 | 166 | 6 | 11 | 522 | 69 | 580 | 0.0 | 681 |
| MS.gene48418.t1 | MTR_3g100280 | 67.933 | 421 | 125 | 3 | 108 | 522 | 1 | 417 | 0.0 | 578 |
| MS.gene48418.t1 | MTR_5g032090 | 58.282 | 489 | 190 | 7 | 27 | 506 | 72 | 555 | 0.0 | 577 |
| MS.gene48418.t1 | MTR_3g100300 | 36.410 | 195 | 75 | 9 | 271 | 454 | 143 | 299 | 2.26e-15 | 77.8 |
| MS.gene48418.t1 | MTR_3g099260 | 37.634 | 93 | 55 | 2 | 281 | 373 | 72 | 161 | 1.17e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48418.t1 | AT1G58200 | 55.278 | 521 | 213 | 5 | 17 | 523 | 66 | 580 | 0.0 | 578 |
| MS.gene48418.t1 | AT1G58200 | 55.278 | 521 | 213 | 5 | 17 | 523 | 66 | 580 | 0.0 | 578 |
| MS.gene48418.t1 | AT5G10490 | 54.038 | 520 | 229 | 4 | 18 | 537 | 39 | 548 | 0.0 | 560 |
| MS.gene48418.t1 | AT5G10490 | 54.038 | 520 | 229 | 4 | 18 | 537 | 67 | 576 | 0.0 | 560 |
| MS.gene48418.t1 | AT5G10490 | 54.038 | 520 | 229 | 4 | 18 | 537 | 65 | 574 | 0.0 | 559 |
| MS.gene48418.t1 | AT4G00290 | 26.106 | 226 | 155 | 6 | 180 | 404 | 276 | 490 | 3.94e-13 | 72.4 |
Find 115 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTAGATGATAACAAAATT+TGG | 0.123396 | 3.1:-79783213 | None:intergenic |
| TGCTGCCGTGTCATTGTTTA+TGG | 0.178720 | 3.1:+79780501 | MS.gene48418:CDS |
| ATCCCCGCTCTTGGTATAAT+TGG | 0.180696 | 3.1:+79779267 | MS.gene48418:CDS |
| TGCTCTCGAACGAGTGAAAA+TGG | 0.182392 | 3.1:-79782912 | None:intergenic |
| ATAATTGGCTTTGCTATCTT+TGG | 0.188913 | 3.1:+79779282 | MS.gene48418:CDS |
| ATTAAAGGATATGAGGTTTC+TGG | 0.198213 | 3.1:+79780851 | MS.gene48418:CDS |
| CAACCTTTGCTGCTGTGGAC+TGG | 0.249892 | 3.1:+79779496 | MS.gene48418:CDS |
| AACCTCTCCTACGCCGTTGC+AGG | 0.261064 | 3.1:+79779310 | MS.gene48418:CDS |
| ATTAGATGATAACAAAATTT+GGG | 0.273692 | 3.1:-79783212 | None:intergenic |
| GGGTGATGTTTCTGATTTAG+AGG | 0.275710 | 3.1:-79783191 | None:intergenic |
| AGATTCAGAGGCTAAATTTC+GGG | 0.275982 | 3.1:-79783146 | None:intergenic |
| GGGATTAATTGAAGCATAAT+TGG | 0.279859 | 3.1:-79779249 | None:intergenic |
| GTTGAAGGCTTAGCTTTATA+AGG | 0.287270 | 3.1:-79782968 | None:intergenic |
| AGCTGATATGCGCAAGGTTT+TGG | 0.287823 | 3.1:+79781287 | MS.gene48418:CDS |
| ACAGTATTGCTTTCACTTGC+AGG | 0.308252 | 3.1:+79780574 | MS.gene48418:CDS |
| AACCTTTGCTGCTGTGGACT+GGG | 0.325778 | 3.1:+79779497 | MS.gene48418:CDS |
| ATTCGTGAAACCTTGATAAC+TGG | 0.330316 | 3.1:+79783028 | MS.gene48418:CDS |
| TATCAAGGTTTCACGAATCT+TGG | 0.330485 | 3.1:-79783023 | None:intergenic |
| CGGATTAAAACAAAGATTAA+AGG | 0.332484 | 3.1:+79780836 | MS.gene48418:CDS |
| ATAGTAGTTGATTGAGTTGA+AGG | 0.349386 | 3.1:-79782983 | None:intergenic |
| GATTTAGAGGCCTTCTGAAC+TGG | 0.357096 | 3.1:-79783178 | None:intergenic |
| AAGCTGTATATACTGCAGTA+TGG | 0.361800 | 3.1:+79780476 | MS.gene48418:CDS |
| GTGGTTGGCTGCTGGTGGTA+TGG | 0.365271 | 3.1:+79780549 | MS.gene48418:CDS |
| GTCATTGTTTATGGAGTTGT+TGG | 0.376702 | 3.1:+79780510 | MS.gene48418:CDS |
| AAGATTCAGAGGCTAAATTT+CGG | 0.378425 | 3.1:-79783147 | None:intergenic |
| AGCAGCCGTTGCTTTAAAAT+CGG | 0.381438 | 3.1:-79779656 | None:intergenic |
| ATGTTGACTTTAACTTATCC+TGG | 0.383411 | 3.1:-79783111 | None:intergenic |
| AACAAAGATTAAAGGATATG+AGG | 0.385214 | 3.1:+79780844 | MS.gene48418:CDS |
| TCCAGAAAATCAAGCTGTTA+TGG | 0.387172 | 3.1:+79781371 | MS.gene48418:CDS |
| GTGAAAATGGGGTCGTCAAA+TGG | 0.395728 | 3.1:-79782899 | None:intergenic |
| TTCACACTCAACTTGTGATT+AGG | 0.403461 | 3.1:-79781067 | None:intergenic |
| TGGTTGGCTGCTGGTGGTAT+GGG | 0.409781 | 3.1:+79780550 | MS.gene48418:CDS |
| CTGGGGTAATGCTGCTCTGC+AGG | 0.412173 | 3.1:+79779515 | MS.gene48418:CDS |
| AGGTCATGTAATGCTATATC+AGG | 0.416426 | 3.1:+79779222 | MS.gene48418:intron |
| ATCTTTGAAACCAGTTATCA+AGG | 0.419330 | 3.1:-79783038 | None:intergenic |
| GCTCTCGAACGAGTGAAAAT+GGG | 0.423150 | 3.1:-79782911 | None:intergenic |
| AACAAAACATTACATCTAGA+AGG | 0.427497 | 3.1:-79778301 | None:intergenic |
| CATTTGCCTACTGTTCTTCA+AGG | 0.430153 | 3.1:+79779711 | MS.gene48418:CDS |
| CAGATGAGCATTGATCTTAT+CGG | 0.431050 | 3.1:+79780451 | MS.gene48418:intron |
| ATCCGCTCATTCACAACAAA+TGG | 0.433039 | 3.1:-79780818 | None:intergenic |
| CGGTCTGCCTTGGTACCGGC+TGG | 0.433778 | 3.1:+79778328 | MS.gene48418:CDS |
| ACAAGCACAAAATTTCTGTA+TGG | 0.446067 | 3.1:+79780151 | MS.gene48418:CDS |
| ATAACTGGTTTCAAAGATGA+AGG | 0.457024 | 3.1:+79783043 | MS.gene48418:CDS |
| TTCAGTGGAACGATAAAAGT+TGG | 0.457315 | 3.1:+79779434 | MS.gene48418:intron |
| TTATAAGGTGAATTTGTGAA+TGG | 0.457800 | 3.1:-79782953 | None:intergenic |
| TATAAGGTGAATTTGTGAAT+GGG | 0.464354 | 3.1:-79782952 | None:intergenic |
| AGATGAGCATTGATCTTATC+GGG | 0.466557 | 3.1:+79780452 | MS.gene48418:intron |
| TTCACTCGTTCGAGAGCAAA+GGG | 0.468144 | 3.1:+79782917 | MS.gene48418:CDS |
| CTTATCCTGGGACTTTACAC+TGG | 0.468864 | 3.1:-79783098 | None:intergenic |
| TGAAGAGTATCTCCGTGTTA+AGG | 0.473513 | 3.1:+79782132 | MS.gene48418:CDS |
| CTTGCGCATATCAGCTATGA+TGG | 0.477938 | 3.1:-79781280 | None:intergenic |
| GCACAGAAGTGGTTGGCTGC+TGG | 0.483881 | 3.1:+79780541 | MS.gene48418:CDS |
| TGGTCACCAACAGTAGTTAG+AGG | 0.488933 | 3.1:+79781019 | MS.gene48418:CDS |
| AAAACAGGAGGCCATTCTCT+TGG | 0.492432 | 3.1:+79782781 | MS.gene48418:intron |
| CTTAGAGTCATCAGTCATCA+TGG | 0.504609 | 3.1:+79782809 | MS.gene48418:CDS |
| CTGAATTGTGCGGATGGGTG+TGG | 0.513236 | 3.1:-79782843 | None:intergenic |
| GTGTCGGTCTGCCTTGGTAC+CGG | 0.515358 | 3.1:+79778324 | MS.gene48418:CDS |
| TTTGTTGTGTCGGTCTGCCT+TGG | 0.519884 | 3.1:+79778318 | MS.gene48418:CDS |
| CTTCAATTAATCCCCGCTCT+TGG | 0.524426 | 3.1:+79779258 | MS.gene48418:CDS |
| TCATTGTTTATGGAGTTGTT+GGG | 0.529134 | 3.1:+79780511 | MS.gene48418:CDS |
| AAGCCAATTATACCAAGAGC+GGG | 0.529821 | 3.1:-79779270 | None:intergenic |
| TGTTGACTTTAACTTATCCT+GGG | 0.529999 | 3.1:-79783110 | None:intergenic |
| CTGGGACTTTACACTGGATG+AGG | 0.533658 | 3.1:-79783092 | None:intergenic |
| TTTCACTCGTTCGAGAGCAA+AGG | 0.537364 | 3.1:+79782916 | MS.gene48418:CDS |
| CTCATCCAGTGTAAAGTCCC+AGG | 0.537833 | 3.1:+79783093 | MS.gene48418:CDS |
| AATCTACCTTGAAGAACAGT+AGG | 0.538559 | 3.1:-79779717 | None:intergenic |
| CATGAATCATCACACTTGAA+AGG | 0.538831 | 3.1:-79780787 | None:intergenic |
| AGCTGTATATACTGCAGTAT+GGG | 0.539129 | 3.1:+79780477 | MS.gene48418:CDS |
| CCGTTGCTTTAAAATCGGAC+TGG | 0.548639 | 3.1:-79779651 | None:intergenic |
| ACCTCTCCTACGCCGTTGCA+GGG | 0.550012 | 3.1:+79779311 | MS.gene48418:CDS |
| TGAGGTTTCTGGTAGAGTTG+AGG | 0.552626 | 3.1:+79780862 | MS.gene48418:CDS |
| ATCTTAGTAAGAAAACTCAT+TGG | 0.552673 | 3.1:+79781101 | MS.gene48418:CDS |
| TTCTGATAATCCAGTTCAGA+AGG | 0.553518 | 3.1:+79783168 | MS.gene48418:CDS |
| TAGAAGGTACAGGCTTATGT+TGG | 0.558063 | 3.1:-79778285 | None:intergenic |
| TGGCTACTGTTTCGTTGTCA+AGG | 0.558304 | 3.1:+79778377 | MS.gene48418:CDS |
| CATCTTCTGAATTGTGCGGA+TGG | 0.559810 | 3.1:-79782849 | None:intergenic |
| GGCCATTTGTTGTGAATGAG+CGG | 0.561264 | 3.1:+79780816 | MS.gene48418:CDS |
| TCAGCACCTCTAACTACTGT+TGG | 0.561707 | 3.1:-79781025 | None:intergenic |
| ACCTTTGCTGCTGTGGACTG+GGG | 0.562252 | 3.1:+79779498 | MS.gene48418:CDS |
| GGATGAGGGCGTCCATGTTG+CGG | 0.563662 | 3.1:-79783077 | None:intergenic |
| TCTAAGAAGATCCAAGAGAA+TGG | 0.567023 | 3.1:-79782792 | None:intergenic |
| TGGGTCTCTCCGCACAGAAG+TGG | 0.571017 | 3.1:+79780530 | MS.gene48418:CDS |
| GGTACCGGCTGGAGCGTGTG+AGG | 0.573244 | 3.1:+79778339 | MS.gene48418:CDS |
| TCTCTCCGCACAGAAGTGGT+TGG | 0.580196 | 3.1:+79780534 | MS.gene48418:CDS |
| TGAGGCTCCGCTGTTGAAAG+TGG | 0.580679 | 3.1:+79778357 | MS.gene48418:CDS |
| ATCTTCTGAATTGTGCGGAT+GGG | 0.581018 | 3.1:-79782848 | None:intergenic |
| ATAGAGCCCTGCAACGGCGT+AGG | 0.581176 | 3.1:-79779317 | None:intergenic |
| CTCTCGAACGAGTGAAAATG+GGG | 0.581916 | 3.1:-79782910 | None:intergenic |
| GCCCTGCAACGGCGTAGGAG+AGG | 0.582945 | 3.1:-79779312 | None:intergenic |
| TCACCTTGCTATCAGTCACT+TGG | 0.584498 | 3.1:+79781135 | MS.gene48418:CDS |
| ACATTACATCTAGAAGGTAC+AGG | 0.584956 | 3.1:-79778295 | None:intergenic |
| ACCCCAGTCCACAGCAGCAA+AGG | 0.591276 | 3.1:-79779499 | None:intergenic |
| AATTTGTGAATGGGAAAGAG+TGG | 0.592121 | 3.1:-79782943 | None:intergenic |
| CATCCAAGTGACTGATAGCA+AGG | 0.593216 | 3.1:-79781138 | None:intergenic |
| GGAGCCTCACACGCTCCAGC+CGG | 0.596349 | 3.1:-79778343 | None:intergenic |
| TCATCAGTCATCATGGAGCT+CGG | 0.597209 | 3.1:+79782816 | MS.gene48418:CDS |
| GCTTTCACTTGCAGGTCGTG+AGG | 0.598539 | 3.1:+79780582 | MS.gene48418:CDS |
| TTCTGTAGCATGTAGGATGG+TGG | 0.601690 | 3.1:+79780999 | MS.gene48418:intron |
| GTGTGATGATTCATGCAACT+CGG | 0.610555 | 3.1:+79780795 | MS.gene48418:CDS |
| TTAGATGATAACAAAATTTG+GGG | 0.623288 | 3.1:-79783211 | None:intergenic |
| TGGATTATCAGAAGATTCAG+AGG | 0.623721 | 3.1:-79783158 | None:intergenic |
| ACACGCTCCAGCCGGTACCA+AGG | 0.634927 | 3.1:-79778335 | None:intergenic |
| CATCATAGCTGATATGCGCA+AGG | 0.643564 | 3.1:+79781281 | MS.gene48418:CDS |
| CAGAAGTGGTTGGCTGCTGG+TGG | 0.645748 | 3.1:+79780544 | MS.gene48418:CDS |
| CAACTCCATAAACAATGACA+CGG | 0.645901 | 3.1:-79780506 | None:intergenic |
| AAAGCCAATTATACCAAGAG+CGG | 0.646228 | 3.1:-79779271 | None:intergenic |
| ACAGTAGGCAAATGTAAGCA+CGG | 0.647849 | 3.1:-79779702 | None:intergenic |
| GGAGAAATAGAGCCCTGCAA+CGG | 0.655517 | 3.1:-79779323 | None:intergenic |
| TGGGACTTTACACTGGATGA+GGG | 0.659785 | 3.1:-79783091 | None:intergenic |
| AATCTAGTCTCACCTTAACA+CGG | 0.682332 | 3.1:-79782144 | None:intergenic |
| AGCAGCCAACCACTTCTGTG+CGG | 0.694661 | 3.1:-79780539 | None:intergenic |
| TGTACATCTTCTGAATTGTG+CGG | 0.699375 | 3.1:-79782853 | None:intergenic |
| AGCCAATTATACCAAGAGCG+GGG | 0.701628 | 3.1:-79779269 | None:intergenic |
| ACAGTAGCCACTTTCAACAG+CGG | 0.712676 | 3.1:-79778364 | None:intergenic |
| AGTTGAGTGTGAATGTTGTG+AGG | 0.723498 | 3.1:+79781077 | MS.gene48418:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACAAAAATAAATAAAAAA+GGG | + | chr3.1:79779861-79779880 | MS.gene48418:intron | 10.0% |
| !!! | TAACATTTTTCTAAAATAAT+GGG | + | chr3.1:79780252-79780271 | MS.gene48418:intron | 10.0% |
| !!! | TACTATCATTATTTTTTATT+TGG | + | chr3.1:79779955-79779974 | MS.gene48418:intron | 10.0% |
| !!! | TAGAATAATTTTCAAAAAAT+AGG | - | chr3.1:79778740-79778759 | None:intergenic | 10.0% |
| !!! | TATTTTTATATCACTTAAAA+TGG | - | chr3.1:79780953-79780972 | None:intergenic | 10.0% |
| !!! | TTTTTTGTAAACATAAAAAT+TGG | - | chr3.1:79782319-79782338 | None:intergenic | 10.0% |
| !! | AAAAAGTAAAAAGTAAATCT+TGG | - | chr3.1:79782373-79782392 | None:intergenic | 15.0% |
| !! | AATTGTTTCATCATAAAATA+TGG | + | chr3.1:79782668-79782687 | MS.gene48418:intron | 15.0% |
| !! | ATGGTATTTAAAAAATTTAC+TGG | + | chr3.1:79781193-79781212 | MS.gene48418:intron | 15.0% |
| !! | ATTAGATGATAACAAAATTT+GGG | - | chr3.1:79783215-79783234 | None:intergenic | 15.0% |
| !! | CACACAAAAATAAATAAAAA+AGG | + | chr3.1:79779860-79779879 | MS.gene48418:intron | 15.0% |
| !! | TGGTATTTAAAAAATTTACT+GGG | + | chr3.1:79781194-79781213 | MS.gene48418:intron | 15.0% |
| !! | TTGTTAGAATTAATGTAAAT+TGG | + | chr3.1:79778459-79778478 | MS.gene48418:intron | 15.0% |
| !!! | AATAATCCTATATATTTTAC+AGG | - | chr3.1:79780353-79780372 | None:intergenic | 15.0% |
| !!! | CATAATTTAATTTAGAGTTT+CGG | - | chr3.1:79779046-79779065 | None:intergenic | 15.0% |
| !!! | CATTTATTTCATTAACATTT+TGG | + | chr3.1:79781947-79781966 | MS.gene48418:intron | 15.0% |
| !!! | GTAACATTTTTCTAAAATAA+TGG | + | chr3.1:79780251-79780270 | MS.gene48418:intron | 15.0% |
| !!! | TTATATTTTGAAATTGATGT+AGG | + | chr3.1:79779202-79779221 | MS.gene48418:intron | 15.0% |
| !!! | TTTTGTCATTTACTTTTTTA+TGG | + | chr3.1:79780657-79780676 | MS.gene48418:intron | 15.0% |
| !! | AAAATTAGATACTAACTTCT+TGG | - | chr3.1:79779347-79779366 | None:intergenic | 20.0% |
| !! | AACAAATGCATAACAAATTT+AGG | - | chr3.1:79782566-79782585 | None:intergenic | 20.0% |
| !! | AATAAGCTTATCTTACAATT+AGG | - | chr3.1:79779809-79779828 | None:intergenic | 20.0% |
| !! | AATTATCTAACTAACTGAAA+AGG | + | chr3.1:79780893-79780912 | MS.gene48418:intron | 20.0% |
| !! | ATAAACCAATTAACAGAAAA+AGG | - | chr3.1:79781403-79781422 | None:intergenic | 20.0% |
| !! | CAAAAATAAATAAAAAAGGG+AGG | + | chr3.1:79779864-79779883 | MS.gene48418:intron | 20.0% |
| !! | CACATAATAGCTTATTATAT+AGG | + | chr3.1:79782456-79782475 | MS.gene48418:intron | 20.0% |
| !! | CATTAGATGATAACAAAATT+TGG | - | chr3.1:79783216-79783235 | None:intergenic | 20.0% |
| !! | GTGTAATTATTATGGTAATT+AGG | + | chr3.1:79778501-79778520 | MS.gene48418:intron | 20.0% |
| !! | TAAAAATTGGTGAAAAATTG+AGG | - | chr3.1:79782306-79782325 | None:intergenic | 20.0% |
| !! | TAATGTAAATTGGACAATTA+TGG | + | chr3.1:79778469-79778488 | MS.gene48418:intron | 20.0% |
| !! | TATTGTATTTAGGAATTAGT+AGG | - | chr3.1:79779169-79779188 | None:intergenic | 20.0% |
| !! | TTAGATGATAACAAAATTTG+GGG | - | chr3.1:79783214-79783233 | None:intergenic | 20.0% |
| !! | TTGTCAAATTATACTATGAT+AGG | + | chr3.1:79781840-79781859 | MS.gene48418:intron | 20.0% |
| !!! | AATTTTTTTTGTTCTACTAG+AGG | - | chr3.1:79781321-79781340 | None:intergenic | 20.0% |
| !!! | GTGATATAAAAATAGTTTTC+TGG | + | chr3.1:79780959-79780978 | MS.gene48418:intron | 20.0% |
| !!! | TATATTCAAGTCATTTTGTT+CGG | + | chr3.1:79782707-79782726 | MS.gene48418:intron | 20.0% |
| ! | AACAAAAAAAATTGCACAGA+AGG | + | chr3.1:79781328-79781347 | MS.gene48418:CDS | 25.0% |
| ! | AACAAAACATTACATCTAGA+AGG | - | chr3.1:79778304-79778323 | None:intergenic | 25.0% |
| ! | AACAAAGATTAAAGGATATG+AGG | + | chr3.1:79780844-79780863 | MS.gene48418:CDS | 25.0% |
| ! | ACAAAAAAAATTGCACAGAA+GGG | + | chr3.1:79781329-79781348 | MS.gene48418:CDS | 25.0% |
| ! | AGTCAACCTGTAAAATATAT+AGG | + | chr3.1:79780344-79780363 | MS.gene48418:intron | 25.0% |
| ! | ATCTTAGTAAGAAAACTCAT+TGG | + | chr3.1:79781101-79781120 | MS.gene48418:CDS | 25.0% |
| ! | CCAATGATTGATAAATTACT+AGG | - | chr3.1:79781889-79781908 | None:intergenic | 25.0% |
| ! | CCTAAATACAATATCTATGA+AGG | + | chr3.1:79779176-79779195 | MS.gene48418:intron | 25.0% |
| ! | CCTAGTAAAAAATTCTACAA+AGG | - | chr3.1:79781627-79781646 | None:intergenic | 25.0% |
| ! | CCTAGTAATTTATCAATCAT+TGG | + | chr3.1:79781886-79781905 | MS.gene48418:intron | 25.0% |
| ! | CCTTCATAGATATTGTATTT+AGG | - | chr3.1:79779179-79779198 | None:intergenic | 25.0% |
| ! | CGGATTAAAACAAAGATTAA+AGG | + | chr3.1:79780836-79780855 | MS.gene48418:CDS | 25.0% |
| ! | CTACTATTCTAATCTTCATT+TGG | - | chr3.1:79780326-79780345 | None:intergenic | 25.0% |
| ! | CTTATTATATAGGCTGATAT+CGG | + | chr3.1:79782466-79782485 | MS.gene48418:intron | 25.0% |
| ! | CTTCAAACACATAATAGTAA+TGG | - | chr3.1:79780075-79780094 | None:intergenic | 25.0% |
| ! | GAAAATTATTCTACTTGCAA+TGG | + | chr3.1:79778747-79778766 | MS.gene48418:intron | 25.0% |
| ! | GAAACAATAGTAATGTAATG+AGG | - | chr3.1:79782527-79782546 | None:intergenic | 25.0% |
| ! | GCATCAAATGATATGATTTA+TGG | - | chr3.1:79779105-79779124 | None:intergenic | 25.0% |
| ! | TAATATCTGCAACAGAAAAA+GGG | - | chr3.1:79782083-79782102 | None:intergenic | 25.0% |
| ! | TAATTTCCATGTGATAAAAC+AGG | + | chr3.1:79782766-79782785 | MS.gene48418:intron | 25.0% |
| ! | TATAAGGTGAATTTGTGAAT+GGG | - | chr3.1:79782955-79782974 | None:intergenic | 25.0% |
| ! | TTATAAGGTGAATTTGTGAA+TGG | - | chr3.1:79782956-79782975 | None:intergenic | 25.0% |
| ! | TTCCACAATGTTAATTATGA+GGG | + | chr3.1:79780373-79780392 | MS.gene48418:intron | 25.0% |
| ! | TTTCCACAATGTTAATTATG+AGG | + | chr3.1:79780372-79780391 | MS.gene48418:intron | 25.0% |
| ! | TTTCCATCATGCAATAAAAT+TGG | + | chr3.1:79778615-79778634 | MS.gene48418:intron | 25.0% |
| ! | TTTCTTCTTCAAATTACTCT+CGG | + | chr3.1:79782393-79782412 | MS.gene48418:intron | 25.0% |
| !! | AAACACATAATAGTAATGGA+TGG | - | chr3.1:79780071-79780090 | None:intergenic | 25.0% |
| !! | AAACCAATTTTATTGCATGA+TGG | - | chr3.1:79778621-79778640 | None:intergenic | 25.0% |
| !! | GGAATAAAAAAGTATAGACA+CGG | + | chr3.1:79779885-79779904 | MS.gene48418:intron | 25.0% |
| !! | GTATAATTTGACAACCATTT+TGG | - | chr3.1:79781834-79781853 | None:intergenic | 25.0% |
| !! | TACTTTTCTTTCATTGTTGT+CGG | - | chr3.1:79780186-79780205 | None:intergenic | 25.0% |
| !! | TATTTTCTTGAGATTTGTGT+CGG | + | chr3.1:79778924-79778943 | MS.gene48418:intron | 25.0% |
| !! | TGATACCTTTTTCTGTTAAT+TGG | + | chr3.1:79781395-79781414 | MS.gene48418:intron | 25.0% |
| !!! | AACACATAATAGTAATGGAT+GGG | - | chr3.1:79780070-79780089 | None:intergenic | 25.0% |
| !!! | AGAAAGTATCAACTATCAAA+GGG | - | chr3.1:79780618-79780637 | None:intergenic | 25.0% |
| !!! | ATTTTATTGCATGATGGAAA+AGG | - | chr3.1:79778615-79778634 | None:intergenic | 25.0% |
| !!! | CCTTTGTAGAATTTTTTACT+AGG | + | chr3.1:79781624-79781643 | MS.gene48418:intron | 25.0% |
| !!! | TAGAAAGTATCAACTATCAA+AGG | - | chr3.1:79780619-79780638 | None:intergenic | 25.0% |
| !!! | TGCAATAAAATTGGTTTGTT+TGG | + | chr3.1:79778624-79778643 | MS.gene48418:intron | 25.0% |
| !!! | TTGATAACATATGTTTTCAG+TGG | + | chr3.1:79779419-79779438 | MS.gene48418:intron | 25.0% |
| !!! | TTTTTTTCATCTTGCTTTGA+TGG | - | chr3.1:79783247-79783266 | None:intergenic | 25.0% |
| AAGATTCAGAGGCTAAATTT+CGG | - | chr3.1:79783150-79783169 | None:intergenic | 30.0% | |
| AAGGGAAGAAAATAAGATAC+TGG | - | chr3.1:79781451-79781470 | None:intergenic | 30.0% | |
| AAGTAGAGCAGAAAGATAAT+AGG | - | chr3.1:79781997-79782016 | None:intergenic | 30.0% | |
| ACAAGCACAAAATTTCTGTA+TGG | + | chr3.1:79780151-79780170 | MS.gene48418:CDS | 30.0% | |
| ACATGGCAAAGATATGTAAA+AGG | - | chr3.1:79780213-79780232 | None:intergenic | 30.0% | |
| AGATAGCTAATTGTGTACAA+TGG | - | chr3.1:79778837-79778856 | None:intergenic | 30.0% | |
| AGTAGAGCAGAAAGATAATA+GGG | - | chr3.1:79781996-79782015 | None:intergenic | 30.0% | |
| ATAACTCTGACTAAAGTCAA+AGG | + | chr3.1:79781710-79781729 | MS.gene48418:intron | 30.0% | |
| ATCAATCATTGGAATCTGAT+TGG | + | chr3.1:79781897-79781916 | MS.gene48418:intron | 30.0% | |
| ATTAAAGGATATGAGGTTTC+TGG | + | chr3.1:79780851-79780870 | MS.gene48418:CDS | 30.0% | |
| CTAAAAGGAAAACCAAAGTT+TGG | - | chr3.1:79778969-79778988 | None:intergenic | 30.0% | |
| CTAATATCTGCAACAGAAAA+AGG | - | chr3.1:79782084-79782103 | None:intergenic | 30.0% | |
| GGGATTAATTGAAGCATAAT+TGG | - | chr3.1:79779252-79779271 | None:intergenic | 30.0% | |
| GGTTATGACTTATGATTGAA+AGG | + | chr3.1:79778768-79778787 | MS.gene48418:intron | 30.0% | |
| TAAATTGGACAATTATGGAC+TGG | + | chr3.1:79778474-79778493 | MS.gene48418:intron | 30.0% | |
| TCATCTGTTTCATTCCAAAA+TGG | + | chr3.1:79781817-79781836 | MS.gene48418:intron | 30.0% | |
| TCATTGTTTATGGAGTTGTT+GGG | + | chr3.1:79780511-79780530 | MS.gene48418:CDS | 30.0% | |
| TTAGAAACCTGATTCAACTA+CGG | - | chr3.1:79781691-79781710 | None:intergenic | 30.0% | |
| TTTAGGCTACACAATATTTC+TGG | - | chr3.1:79782549-79782568 | None:intergenic | 30.0% | |
| TTTGTTCGGTTAACTGTTAA+GGG | + | chr3.1:79782721-79782740 | MS.gene48418:intron | 30.0% | |
| ! | AAAAGCTTTTGTAAGCATTC+TGG | - | chr3.1:79781787-79781806 | None:intergenic | 30.0% |
| ! | AATTTACTGGGATTTTCTGA+TGG | + | chr3.1:79781206-79781225 | MS.gene48418:intron | 30.0% |
| ! | ATAACTGGTTTCAAAGATGA+AGG | + | chr3.1:79783043-79783062 | MS.gene48418:CDS | 30.0% |
| ! | ATTTTCTTGAGATTTGTGTC+GGG | + | chr3.1:79778925-79778944 | MS.gene48418:intron | 30.0% |
| ! | TCATATTTTCTGTAGCATGT+AGG | + | chr3.1:79780992-79781011 | MS.gene48418:intron | 30.0% |
| ! | TTGTTCTACTAGAGGATTTT+TGG | - | chr3.1:79781313-79781332 | None:intergenic | 30.0% |
| ! | TTTAATTTAGAGTTTCGGTG+CGG | - | chr3.1:79779041-79779060 | None:intergenic | 30.0% |
| ! | TTTTGTTCGGTTAACTGTTA+AGG | + | chr3.1:79782720-79782739 | MS.gene48418:intron | 30.0% |
| !! | AACTCATCTAAAGCTTTAAG+TGG | - | chr3.1:79780295-79780314 | None:intergenic | 30.0% |
| !! | ATAATTGGCTTTGCTATCTT+TGG | + | chr3.1:79779282-79779301 | MS.gene48418:CDS | 30.0% |
| !! | ATAGTAGTTGATTGAGTTGA+AGG | - | chr3.1:79782986-79783005 | None:intergenic | 30.0% |
| !! | ATCTTTGAAACCAGTTATCA+AGG | - | chr3.1:79783041-79783060 | None:intergenic | 30.0% |
| !! | ATGTTGACTTTAACTTATCC+TGG | - | chr3.1:79783114-79783133 | None:intergenic | 30.0% |
| !! | GATGTAATGTTTTGTTGTGT+CGG | + | chr3.1:79778308-79778327 | MS.gene48418:CDS | 30.0% |
| !! | TGTTGACTTTAACTTATCCT+GGG | - | chr3.1:79783113-79783132 | None:intergenic | 30.0% |
| !!! | CAAACTTTGGTTTTCCTTTT+AGG | + | chr3.1:79778967-79778986 | MS.gene48418:intron | 30.0% |
| !!! | CTTGTTGCTTTTGTACATTT+TGG | + | chr3.1:79782501-79782520 | MS.gene48418:intron | 30.0% |
| AAACTTCTGTCAACTACGAA+AGG | - | chr3.1:79778418-79778437 | None:intergenic | 35.0% | |
| AAAGCCAATTATACCAAGAG+CGG | - | chr3.1:79779274-79779293 | None:intergenic | 35.0% | |
| AAGCTGTATATACTGCAGTA+TGG | + | chr3.1:79780476-79780495 | MS.gene48418:CDS | 35.0% | |
| AATCTACCTTGAAGAACAGT+AGG | - | chr3.1:79779720-79779739 | None:intergenic | 35.0% | |
| AATCTAGTCTCACCTTAACA+CGG | - | chr3.1:79782147-79782166 | None:intergenic | 35.0% | |
| AATTTGTGAATGGGAAAGAG+TGG | - | chr3.1:79782946-79782965 | None:intergenic | 35.0% | |
| ACAGAAGTTTCGTCATTCAT+TGG | + | chr3.1:79778428-79778447 | MS.gene48418:intron | 35.0% | |
| AGAACCAAGACTGAAGATAA+AGG | - | chr3.1:79781470-79781489 | None:intergenic | 35.0% | |
| AGATTCAGAGGCTAAATTTC+GGG | - | chr3.1:79783149-79783168 | None:intergenic | 35.0% | |
| AGCAAAACCATAGGGTTAAA+TGG | - | chr3.1:79781650-79781669 | None:intergenic | 35.0% | |
| AGCAACTCAATTGTATTAGC+TGG | + | chr3.1:79782278-79782297 | MS.gene48418:intron | 35.0% | |
| AGCTAATTGTGTACAATGGT+TGG | - | chr3.1:79778833-79778852 | None:intergenic | 35.0% | |
| AGCTGTATATACTGCAGTAT+GGG | + | chr3.1:79780477-79780496 | MS.gene48418:CDS | 35.0% | |
| AGGAATTAGTAGGCTGAAAA+AGG | - | chr3.1:79779159-79779178 | None:intergenic | 35.0% | |
| AGGACTTGACAAACTTTCAA+CGG | - | chr3.1:79779567-79779586 | None:intergenic | 35.0% | |
| AGGCAATACATAAATGACAC+AGG | - | chr3.1:79781869-79781888 | None:intergenic | 35.0% | |
| AGGTCATGTAATGCTATATC+AGG | + | chr3.1:79779222-79779241 | MS.gene48418:intron | 35.0% | |
| ATGTTACACACACACATGAA+TGG | - | chr3.1:79780238-79780257 | None:intergenic | 35.0% | |
| ATTATGTCCACAGTTGTTGT+CGG | + | chr3.1:79779754-79779773 | MS.gene48418:intron | 35.0% | |
| CAACTCCATAAACAATGACA+CGG | - | chr3.1:79780509-79780528 | None:intergenic | 35.0% | |
| CACCCTCATAATTAACATTG+TGG | - | chr3.1:79780378-79780397 | None:intergenic | 35.0% | |
| CATGAATCATCACACTTGAA+AGG | - | chr3.1:79780790-79780809 | None:intergenic | 35.0% | |
| CTAGAAATGTAAACAAGCAG+AGG | - | chr3.1:79781598-79781617 | None:intergenic | 35.0% | |
| CTGGACTCGTGTAATTATTA+TGG | + | chr3.1:79778493-79778512 | MS.gene48418:intron | 35.0% | |
| GAACCAAGACTGAAGATAAA+GGG | - | chr3.1:79781469-79781488 | None:intergenic | 35.0% | |
| GCTAATTGTGTACAATGGTT+GGG | - | chr3.1:79778832-79778851 | None:intergenic | 35.0% | |
| GGCGCAAGATATTAATAGTA+TGG | - | chr3.1:79779788-79779807 | None:intergenic | 35.0% | |
| GTCATTGTTTATGGAGTTGT+TGG | + | chr3.1:79780510-79780529 | MS.gene48418:CDS | 35.0% | |
| TATCAAGGTTTCACGAATCT+TGG | - | chr3.1:79783026-79783045 | None:intergenic | 35.0% | |
| TCCAGAAAATCAAGCTGTTA+TGG | + | chr3.1:79781371-79781390 | MS.gene48418:CDS | 35.0% | |
| TCTAAGAAGATCCAAGAGAA+TGG | - | chr3.1:79782795-79782814 | None:intergenic | 35.0% | |
| TGAATAGCAGCAAAACCATA+GGG | - | chr3.1:79781658-79781677 | None:intergenic | 35.0% | |
| TGGATTATCAGAAGATTCAG+AGG | - | chr3.1:79783161-79783180 | None:intergenic | 35.0% | |
| TGTACATCTTCTGAATTGTG+CGG | - | chr3.1:79782856-79782875 | None:intergenic | 35.0% | |
| TTACCATACGAAAGGATGAT+GGG | - | chr3.1:79778896-79778915 | None:intergenic | 35.0% | |
| TTCACACTCAACTTGTGATT+AGG | - | chr3.1:79781070-79781089 | None:intergenic | 35.0% | |
| TTCAGTGGAACGATAAAAGT+TGG | + | chr3.1:79779434-79779453 | MS.gene48418:intron | 35.0% | |
| TTCTGATAATCCAGTTCAGA+AGG | + | chr3.1:79783168-79783187 | MS.gene48418:CDS | 35.0% | |
| TTTCCATGTGATAAAACAGG+AGG | + | chr3.1:79782769-79782788 | MS.gene48418:intron | 35.0% | |
| ! | AAAGTACCAATTAGGCTTGT+AGG | + | chr3.1:79781543-79781562 | MS.gene48418:intron | 35.0% |
| ! | ACATTACATCTAGAAGGTAC+AGG | - | chr3.1:79778298-79778317 | None:intergenic | 35.0% |
| ! | ACCATAACAGCTTGATTTTC+TGG | - | chr3.1:79781375-79781394 | None:intergenic | 35.0% |
| ! | ATTCGTGAAACCTTGATAAC+TGG | + | chr3.1:79783028-79783047 | MS.gene48418:CDS | 35.0% |
| ! | ATTTTCTGTAGCATGTAGGA+TGG | + | chr3.1:79780996-79781015 | MS.gene48418:intron | 35.0% |
| ! | CAATTGCTTTAGACAACACA+TGG | - | chr3.1:79779373-79779392 | None:intergenic | 35.0% |
| !! | AGATGAGCATTGATCTTATC+GGG | + | chr3.1:79780452-79780471 | MS.gene48418:intron | 35.0% |
| !! | CAGATGAGCATTGATCTTAT+CGG | + | chr3.1:79780451-79780470 | MS.gene48418:intron | 35.0% |
| !! | GGTTCTGAAAGGAAGTTATA+AGG | + | chr3.1:79781484-79781503 | MS.gene48418:intron | 35.0% |
| !! | GTTGAAGGCTTAGCTTTATA+AGG | - | chr3.1:79782971-79782990 | None:intergenic | 35.0% |
| !!! | GCACTGTTGTTTTTACATGT+AGG | - | chr3.1:79778712-79778731 | None:intergenic | 35.0% |
| !!! | TTTGGTTTTCCTTTTAGGAG+AGG | + | chr3.1:79778972-79778991 | MS.gene48418:intron | 35.0% |
| AAAATGGAAACCACTCACGT+TGG | - | chr3.1:79780937-79780956 | None:intergenic | 40.0% | |
| AAAGGCTTTCTTTGACATGC+TGG | + | chr3.1:79778786-79778805 | MS.gene48418:intron | 40.0% | |
| AAGATTGATGTGAGTGCTCT+TGG | + | chr3.1:79781166-79781185 | MS.gene48418:intron | 40.0% | |
| AAGCCAATTATACCAAGAGC+GGG | - | chr3.1:79779273-79779292 | None:intergenic | 40.0% | |
| AAGGCTTTCTTTGACATGCT+GGG | + | chr3.1:79778787-79778806 | MS.gene48418:intron | 40.0% | |
| ACAGTAGGCAAATGTAAGCA+CGG | - | chr3.1:79779705-79779724 | None:intergenic | 40.0% | |
| ACAGTATTGCTTTCACTTGC+AGG | + | chr3.1:79780574-79780593 | MS.gene48418:CDS | 40.0% | |
| ACCTTGACGTAAACTGTTTC+AGG | + | chr3.1:79779597-79779616 | MS.gene48418:intron | 40.0% | |
| ACGTCAAGGTGCATACAAAT+AGG | - | chr3.1:79779587-79779606 | None:intergenic | 40.0% | |
| AGGTATCTTTCTGGATCAGA+AGG | + | chr3.1:79779535-79779554 | MS.gene48418:intron | 40.0% | |
| AGTTGAGTGTGAATGTTGTG+AGG | + | chr3.1:79781077-79781096 | MS.gene48418:CDS | 40.0% | |
| ATCCGCTCATTCACAACAAA+TGG | - | chr3.1:79780821-79780840 | None:intergenic | 40.0% | |
| ATCTTCTGAATTGTGCGGAT+GGG | - | chr3.1:79782851-79782870 | None:intergenic | 40.0% | |
| ATGCTATGAGATGCATCTCA+AGG | - | chr3.1:79781514-79781533 | None:intergenic | 40.0% | |
| ATGTACAAAAGCAACAAGCC+TGG | - | chr3.1:79782499-79782518 | None:intergenic | 40.0% | |
| CACACACATGAATGGAAACA+TGG | - | chr3.1:79780230-79780249 | None:intergenic | 40.0% | |
| CATTTGCCTACTGTTCTTCA+AGG | + | chr3.1:79779711-79779730 | MS.gene48418:CDS | 40.0% | |
| CCTTGACGTAAACTGTTTCA+GGG | + | chr3.1:79779598-79779617 | MS.gene48418:intron | 40.0% | |
| CTAGATTGACGATAGCAACT+TGG | + | chr3.1:79782160-79782179 | MS.gene48418:intron | 40.0% | |
| CTTAGAGTCATCAGTCATCA+TGG | + | chr3.1:79782809-79782828 | MS.gene48418:CDS | 40.0% | |
| CTTCCCTTTATCTTCAGTCT+TGG | + | chr3.1:79781463-79781482 | MS.gene48418:intron | 40.0% | |
| CTTGACGTAAACTGTTTCAG+GGG | + | chr3.1:79779599-79779618 | MS.gene48418:intron | 40.0% | |
| GAGCTTTGCATTTACATTCC+AGG | - | chr3.1:79780403-79780422 | None:intergenic | 40.0% | |
| GCTATCGCATCTTAAAACTG+AGG | + | chr3.1:79781228-79781247 | MS.gene48418:intron | 40.0% | |
| GTGAAAAAATTGCCGCAACA+TGG | + | chr3.1:79783065-79783084 | MS.gene48418:CDS | 40.0% | |
| GTGAATAGCAGCAAAACCAT+AGG | - | chr3.1:79781659-79781678 | None:intergenic | 40.0% | |
| GTGTGATGATTCATGCAACT+CGG | + | chr3.1:79780795-79780814 | MS.gene48418:CDS | 40.0% | |
| GTTACCATACGAAAGGATGA+TGG | - | chr3.1:79778897-79778916 | None:intergenic | 40.0% | |
| TACTAGGCCATTTAACCCTA+TGG | + | chr3.1:79781640-79781659 | MS.gene48418:intron | 40.0% | |
| TCCTTAAGAGCAACTCTTCA+CGG | + | chr3.1:79780709-79780728 | MS.gene48418:intron | 40.0% | |
| TGACAGAGTTATCAGTGCAT+AGG | - | chr3.1:79778678-79778697 | None:intergenic | 40.0% | |
| TGAGAGAGTTACCATACGAA+AGG | - | chr3.1:79778904-79778923 | None:intergenic | 40.0% | |
| TGGAGGAGTGAGTAGTTATT+GGG | + | chr3.1:79779004-79779023 | MS.gene48418:intron | 40.0% | |
| TGTGAGTGCTCTTGGTTTAA+TGG | + | chr3.1:79781174-79781193 | MS.gene48418:intron | 40.0% | |
| TTTCCCATCATCCTTTCGTA+TGG | + | chr3.1:79778890-79778909 | MS.gene48418:intron | 40.0% | |
| ! | ATTGCACAGAAGGGTTTTTC+TGG | + | chr3.1:79781338-79781357 | MS.gene48418:CDS | 40.0% |
| ! | ATTTTCAACCTTTGCTGCTG+TGG | + | chr3.1:79779491-79779510 | MS.gene48418:CDS | 40.0% |
| ! | GGGTGATGTTTCTGATTTAG+AGG | - | chr3.1:79783194-79783213 | None:intergenic | 40.0% |
| ! | TAGAAGGTACAGGCTTATGT+TGG | - | chr3.1:79778288-79778307 | None:intergenic | 40.0% |
| !! | AGCAGCCGTTGCTTTAAAAT+CGG | - | chr3.1:79779659-79779678 | None:intergenic | 40.0% |
| !! | GTTTTTGATTGCACGACTAG+TGG | - | chr3.1:79779632-79779651 | None:intergenic | 40.0% |
| !! | TCTTCAGTCTTGGTTCTGAA+AGG | + | chr3.1:79781473-79781492 | MS.gene48418:intron | 40.0% |
| !! | TGAAGAGTATCTCCGTGTTA+AGG | + | chr3.1:79782132-79782151 | MS.gene48418:CDS | 40.0% |
| !!! | CCAGTCCGATTTTAAAGCAA+CGG | + | chr3.1:79779651-79779670 | MS.gene48418:CDS | 40.0% |
| AAAACAGGAGGCCATTCTCT+TGG | + | chr3.1:79782781-79782800 | MS.gene48418:intron | 45.0% | |
| AAATGCTTCATTGCCGCCAT+GGG | - | chr3.1:79781932-79781951 | None:intergenic | 45.0% | |
| AGCCAATTATACCAAGAGCG+GGG | - | chr3.1:79779272-79779291 | None:intergenic | 45.0% | |
| ATCCCCGCTCTTGGTATAAT+TGG | + | chr3.1:79779267-79779286 | MS.gene48418:CDS | 45.0% | |
| ATGCATCTCATAGCATAGCC+AGG | + | chr3.1:79781518-79781537 | MS.gene48418:intron | 45.0% | |
| ATTGCCACCGTAGTTGAATC+AGG | + | chr3.1:79781681-79781700 | MS.gene48418:intron | 45.0% | |
| CATCATAGCTGATATGCGCA+AGG | + | chr3.1:79781281-79781300 | MS.gene48418:CDS | 45.0% | |
| CATCCAAGTGACTGATAGCA+AGG | - | chr3.1:79781141-79781160 | None:intergenic | 45.0% | |
| CATCTTCTGAATTGTGCGGA+TGG | - | chr3.1:79782852-79782871 | None:intergenic | 45.0% | |
| CCCTGAAACAGTTTACGTCA+AGG | - | chr3.1:79779601-79779620 | None:intergenic | 45.0% | |
| CTACAGCCTACAAGCCTAAT+TGG | - | chr3.1:79781552-79781571 | None:intergenic | 45.0% | |
| CTCTCGAACGAGTGAAAATG+GGG | - | chr3.1:79782913-79782932 | None:intergenic | 45.0% | |
| CTTATCCTGGGACTTTACAC+TGG | - | chr3.1:79783101-79783120 | None:intergenic | 45.0% | |
| CTTCAATTAATCCCCGCTCT+TGG | + | chr3.1:79779258-79779277 | MS.gene48418:CDS | 45.0% | |
| CTTGCGCATATCAGCTATGA+TGG | - | chr3.1:79781283-79781302 | None:intergenic | 45.0% | |
| GAAACCTGATTCAACTACGG+TGG | - | chr3.1:79781688-79781707 | None:intergenic | 45.0% | |
| GATTTAGAGGCCTTCTGAAC+TGG | - | chr3.1:79783181-79783200 | None:intergenic | 45.0% | |
| GCTCTCGAACGAGTGAAAAT+GGG | - | chr3.1:79782914-79782933 | None:intergenic | 45.0% | |
| GTGAAAATGGGGTCGTCAAA+TGG | - | chr3.1:79782902-79782921 | None:intergenic | 45.0% | |
| GTGGAGGAGTGAGTAGTTAT+TGG | + | chr3.1:79779003-79779022 | MS.gene48418:intron | 45.0% | |
| TAAATGCTTCATTGCCGCCA+TGG | - | chr3.1:79781933-79781952 | None:intergenic | 45.0% | |
| TCAGCACCTCTAACTACTGT+TGG | - | chr3.1:79781028-79781047 | None:intergenic | 45.0% | |
| TCATCAGTCATCATGGAGCT+CGG | + | chr3.1:79782816-79782835 | MS.gene48418:CDS | 45.0% | |
| TGCATCTCATAGCATAGCCA+GGG | + | chr3.1:79781519-79781538 | MS.gene48418:intron | 45.0% | |
| TGCTCTCGAACGAGTGAAAA+TGG | - | chr3.1:79782915-79782934 | None:intergenic | 45.0% | |
| TGGCTACTGTTTCGTTGTCA+AGG | + | chr3.1:79778377-79778396 | MS.gene48418:CDS | 45.0% | |
| TGGGACTTTACACTGGATGA+GGG | - | chr3.1:79783094-79783113 | None:intergenic | 45.0% | |
| TGGTCACCAACAGTAGTTAG+AGG | + | chr3.1:79781019-79781038 | MS.gene48418:CDS | 45.0% | |
| TTCACTCGTTCGAGAGCAAA+GGG | + | chr3.1:79782917-79782936 | MS.gene48418:CDS | 45.0% | |
| TTCTGTAGCATGTAGGATGG+TGG | + | chr3.1:79780999-79781018 | MS.gene48418:intron | 45.0% | |
| TTTCACTCGTTCGAGAGCAA+AGG | + | chr3.1:79782916-79782935 | MS.gene48418:CDS | 45.0% | |
| ! | ACAGTAGCCACTTTCAACAG+CGG | - | chr3.1:79778367-79778386 | None:intergenic | 45.0% |
| ! | AGCTGATATGCGCAAGGTTT+TGG | + | chr3.1:79781287-79781306 | MS.gene48418:CDS | 45.0% |
| ! | GACTTTGTGGTGCCAAACTT+TGG | + | chr3.1:79778954-79778973 | MS.gene48418:intron | 45.0% |
| ! | TCACCTTGCTATCAGTCACT+TGG | + | chr3.1:79781135-79781154 | MS.gene48418:CDS | 45.0% |
| ! | TGATTGGCTATCTTCACCCA+TGG | + | chr3.1:79781913-79781932 | MS.gene48418:intron | 45.0% |
| ! | TGCTGCCGTGTCATTGTTTA+TGG | + | chr3.1:79780501-79780520 | MS.gene48418:CDS | 45.0% |
| ! | TGGCCTCCTGTTTTATCACA+TGG | - | chr3.1:79782775-79782794 | None:intergenic | 45.0% |
| ! | TTTAGAGTTTCGGTGCGGTT+CGG | - | chr3.1:79779036-79779055 | None:intergenic | 45.0% |
| !! | CCGTTGCTTTAAAATCGGAC+TGG | - | chr3.1:79779654-79779673 | None:intergenic | 45.0% |
| !! | GATGATGGGAAATAGCCATG+CGG | - | chr3.1:79778882-79778901 | None:intergenic | 45.0% |
| !! | GGCCATTTGTTGTGAATGAG+CGG | + | chr3.1:79780816-79780835 | MS.gene48418:CDS | 45.0% |
| !! | GGTTTTCCTTTTAGGAGAGG+CGG | + | chr3.1:79778975-79778994 | MS.gene48418:intron | 45.0% |
| !! | GTTAATTATGAGGGTGCTCC+TGG | + | chr3.1:79780382-79780401 | MS.gene48418:intron | 45.0% |
| !! | TGAGGTTTCTGGTAGAGTTG+AGG | + | chr3.1:79780862-79780881 | MS.gene48418:CDS | 45.0% |
| AACCTTTGCTGCTGTGGACT+GGG | + | chr3.1:79779497-79779516 | MS.gene48418:CDS | 50.0% | |
| AGGCTTGTAGGCTGTAGCTA+TGG | + | chr3.1:79781555-79781574 | MS.gene48418:intron | 50.0% | |
| CACAAAAGCTTCAGACCGCA+TGG | + | chr3.1:79778864-79778883 | MS.gene48418:intron | 50.0% | |
| CTCATCCAGTGTAAAGTCCC+AGG | + | chr3.1:79783093-79783112 | MS.gene48418:CDS | 50.0% | |
| CTGCTCTGCAGGTATCTTTC+TGG | + | chr3.1:79779526-79779545 | MS.gene48418:intron | 50.0% | |
| CTGGGACTTTACACTGGATG+AGG | - | chr3.1:79783095-79783114 | None:intergenic | 50.0% | |
| GCAGGTCGTGAGGTACAATA+AGG | + | chr3.1:79780592-79780611 | MS.gene48418:intron | 50.0% | |
| GCCGTGAAGAGTTGCTCTTA+AGG | - | chr3.1:79780713-79780732 | None:intergenic | 50.0% | |
| GCCTAATTGGTACTTTGCCC+TGG | - | chr3.1:79781539-79781558 | None:intergenic | 50.0% | |
| GCTGATATCGGAGATTGTCC+AGG | + | chr3.1:79782478-79782497 | MS.gene48418:intron | 50.0% | |
| GGAGAAATAGAGCCCTGCAA+CGG | - | chr3.1:79779326-79779345 | None:intergenic | 50.0% | |
| TAGAACGCCGACAACAACTG+TGG | - | chr3.1:79779764-79779783 | None:intergenic | 50.0% | |
| TTGGCTATCTTCACCCATGG+CGG | + | chr3.1:79781916-79781935 | MS.gene48418:intron | 50.0% | |
| ! | GCACAGAAGGGTTTTTCTGG+AGG | + | chr3.1:79781341-79781360 | MS.gene48418:CDS | 50.0% |
| ! | GCCAGGGCAAAGTACCAATT+AGG | + | chr3.1:79781535-79781554 | MS.gene48418:intron | 50.0% |
| ! | TTTGTTGTGTCGGTCTGCCT+TGG | + | chr3.1:79778318-79778337 | MS.gene48418:CDS | 50.0% |
| !! | TTTCCTTTTAGGAGAGGCGG+TGG | + | chr3.1:79778978-79778997 | MS.gene48418:intron | 50.0% |
| AGCAGCCAACCACTTCTGTG+CGG | - | chr3.1:79780542-79780561 | None:intergenic | 55.0% | |
| CAACCTTTGCTGCTGTGGAC+TGG | + | chr3.1:79779496-79779515 | MS.gene48418:CDS | 55.0% | |
| CTGAATTGTGCGGATGGGTG+TGG | - | chr3.1:79782846-79782865 | None:intergenic | 55.0% | |
| GCGAACTGATCCAACGTGAG+TGG | + | chr3.1:79780924-79780943 | MS.gene48418:intron | 55.0% | |
| GCTTTCACTTGCAGGTCGTG+AGG | + | chr3.1:79780582-79780601 | MS.gene48418:CDS | 55.0% | |
| TCTCTCCGCACAGAAGTGGT+TGG | + | chr3.1:79780534-79780553 | MS.gene48418:CDS | 55.0% | |
| TGAGATTTGTGTCGGGCGTG+TGG | + | chr3.1:79778932-79778951 | MS.gene48418:intron | 55.0% | |
| TGAGGCTCCGCTGTTGAAAG+TGG | + | chr3.1:79778357-79778376 | MS.gene48418:CDS | 55.0% | |
| ! | ACCTTTGCTGCTGTGGACTG+GGG | + | chr3.1:79779498-79779517 | MS.gene48418:CDS | 55.0% |
| ! | TGGTTGGCTGCTGGTGGTAT+GGG | + | chr3.1:79780550-79780569 | MS.gene48418:CDS | 55.0% |
| AACCTCTCCTACGCCGTTGC+AGG | + | chr3.1:79779310-79779329 | MS.gene48418:CDS | 60.0% | |
| ACCCCAGTCCACAGCAGCAA+AGG | - | chr3.1:79779502-79779521 | None:intergenic | 60.0% | |
| ACCTCTCCTACGCCGTTGCA+GGG | + | chr3.1:79779311-79779330 | MS.gene48418:CDS | 60.0% | |
| ATAGAGCCCTGCAACGGCGT+AGG | - | chr3.1:79779320-79779339 | None:intergenic | 60.0% | |
| CTGGGGTAATGCTGCTCTGC+AGG | + | chr3.1:79779515-79779534 | MS.gene48418:CDS | 60.0% | |
| TGGGTCTCTCCGCACAGAAG+TGG | + | chr3.1:79780530-79780549 | MS.gene48418:CDS | 60.0% | |
| TGTCGGGCGTGTGGACTTTG+TGG | + | chr3.1:79778941-79778960 | MS.gene48418:intron | 60.0% | |
| ! | CAGAAGTGGTTGGCTGCTGG+TGG | + | chr3.1:79780544-79780563 | MS.gene48418:CDS | 60.0% |
| ! | GCACAGAAGTGGTTGGCTGC+TGG | + | chr3.1:79780541-79780560 | MS.gene48418:CDS | 60.0% |
| ! | GTGGTTGGCTGCTGGTGGTA+TGG | + | chr3.1:79780549-79780568 | MS.gene48418:CDS | 60.0% |
| ! | GTGTCGGTCTGCCTTGGTAC+CGG | + | chr3.1:79778324-79778343 | MS.gene48418:CDS | 60.0% |
| !! | CCTTTTAGGAGAGGCGGTGG+CGG | + | chr3.1:79778981-79779000 | MS.gene48418:intron | 60.0% |
| !! | GGATGAGGGCGTCCATGTTG+CGG | - | chr3.1:79783080-79783099 | None:intergenic | 60.0% |
| ACACGCTCCAGCCGGTACCA+AGG | - | chr3.1:79778338-79778357 | None:intergenic | 65.0% | |
| CCGCCACCGCCTCTCCTAAA+AGG | - | chr3.1:79778984-79779003 | None:intergenic | 65.0% | |
| ! | TTTAGGAGAGGCGGTGGCGG+TGG | + | chr3.1:79778984-79779003 | MS.gene48418:intron | 65.0% |
| GCCCTGCAACGGCGTAGGAG+AGG | - | chr3.1:79779315-79779334 | None:intergenic | 70.0% | |
| GGAGCCTCACACGCTCCAGC+CGG | - | chr3.1:79778346-79778365 | None:intergenic | 70.0% | |
| !! | CGGTCTGCCTTGGTACCGGC+TGG | + | chr3.1:79778328-79778347 | MS.gene48418:CDS | 70.0% |
| !! | GGTACCGGCTGGAGCGTGTG+AGG | + | chr3.1:79778339-79778358 | MS.gene48418:CDS | 70.0% |
| ! | AGGAGAGGCGGTGGCGGTGG+AGG | + | chr3.1:79778987-79779006 | MS.gene48418:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 79778247 | 79783270 | 79778247 | ID=MS.gene48418 |
| chr3.1 | mRNA | 79778247 | 79783270 | 79778247 | ID=MS.gene48418.t1;Parent=MS.gene48418 |
| chr3.1 | exon | 79778247 | 79778398 | 79778247 | ID=MS.gene48418.t1.exon1;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79778247 | 79778398 | 79778247 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79779224 | 79779350 | 79779224 | ID=MS.gene48418.t1.exon2;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79779224 | 79779350 | 79779224 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79779439 | 79779536 | 79779439 | ID=MS.gene48418.t1.exon3;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79779439 | 79779536 | 79779439 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79779619 | 79779732 | 79779619 | ID=MS.gene48418.t1.exon4;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79779619 | 79779732 | 79779619 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79780142 | 79780202 | 79780142 | ID=MS.gene48418.t1.exon5;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79780142 | 79780202 | 79780142 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79780454 | 79780603 | 79780454 | ID=MS.gene48418.t1.exon6;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79780454 | 79780603 | 79780454 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79780773 | 79780883 | 79780773 | ID=MS.gene48418.t1.exon7;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79780773 | 79780883 | 79780773 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79781007 | 79781174 | 79781007 | ID=MS.gene48418.t1.exon8;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79781007 | 79781174 | 79781007 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79781279 | 79781392 | 79781279 | ID=MS.gene48418.t1.exon9;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79781279 | 79781392 | 79781279 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79782097 | 79782153 | 79782097 | ID=MS.gene48418.t1.exon10;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79782097 | 79782153 | 79782097 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| chr3.1 | exon | 79782788 | 79783270 | 79782788 | ID=MS.gene48418.t1.exon11;Parent=MS.gene48418.t1 |
| chr3.1 | CDS | 79782788 | 79783270 | 79782788 | ID=cds.MS.gene48418.t1;Parent=MS.gene48418.t1 |
| Gene Sequence |
| Protein sequence |
