Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052159.t1 | AES73164.2 | 93.8 | 544 | 34 | 0 | 1 | 544 | 48 | 591 | 1.20E-285 | 991.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052159.t1 | Q8L7W1 | 61.9 | 438 | 165 | 1 | 17 | 454 | 66 | 501 | 5.6e-151 | 535.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052159.t1 | G7J539 | 93.8 | 544 | 34 | 0 | 1 | 544 | 48 | 591 | 8.6e-286 | 991.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052159 | MS.gene053176 | 0.803735 | 3.02E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene054548 | 0.806877 | 6.64E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene059868 | 0.816212 | 6.21E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene061506 | 0.804522 | 2.07E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene065168 | 0.810421 | 1.16E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene065350 | -0.820434 | 6.87E-53 | -1.69E-46 |
| MS.gene052159 | MS.gene06706 | 0.803209 | 3.89E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene069383 | 0.814448 | 1.53E-51 | -1.69E-46 |
| MS.gene052159 | MS.gene07137 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene07139 | 0.801967 | 7.01E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene07615 | 0.814278 | 1.67E-51 | -1.69E-46 |
| MS.gene052159 | MS.gene07617 | 0.816895 | 4.37E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene07621 | 0.817833 | 2.69E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene08906 | 0.815667 | 8.22E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene08908 | 0.817465 | 3.25E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene20354 | 0.809098 | 2.24E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene24742 | 0.807593 | 4.69E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene26487 | 0.835791 | 1.37E-56 | -1.69E-46 |
| MS.gene052159 | MS.gene27363 | 0.802608 | 5.18E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene30475 | 0.820415 | 6.94E-53 | -1.69E-46 |
| MS.gene052159 | MS.gene39685 | 0.808578 | 2.89E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene40678 | 0.807741 | 4.36E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene48418 | 0.968627 | 6.02E-129 | -1.69E-46 |
| MS.gene052159 | MS.gene61653 | 0.822533 | 2.25E-53 | -1.69E-46 |
| MS.gene052159 | MS.gene65428 | 0.813899 | 2.03E-51 | -1.69E-46 |
| MS.gene052159 | MS.gene66208 | 0.81943 | 1.17E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene66653 | 0.817013 | 4.11E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene68339 | 0.836691 | 8.07E-57 | -1.69E-46 |
| MS.gene052159 | MS.gene68525 | 0.801551 | 8.54E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene68526 | 0.800283 | 1.55E-48 | -1.69E-46 |
| MS.gene052159 | MS.gene70072 | 0.802122 | 6.52E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene70368 | 0.807791 | 4.25E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene72054 | 0.81283 | 3.48E-51 | -1.69E-46 |
| MS.gene052159 | MS.gene74803 | 0.810514 | 1.11E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene78643 | 0.82245 | 2.35E-53 | -1.69E-46 |
| MS.gene052159 | MS.gene80082 | 0.80778 | 4.28E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene83118 | 0.803442 | 3.48E-49 | -1.69E-46 |
| MS.gene052159 | MS.gene87631 | 0.808092 | 3.67E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene88707 | -0.810812 | 9.57E-51 | -1.69E-46 |
| MS.gene052159 | MS.gene89062 | -0.800705 | 1.27E-48 | -1.69E-46 |
| MS.gene052159 | MS.gene93869 | 0.809582 | 1.76E-50 | -1.69E-46 |
| MS.gene052159 | MS.gene94682 | 0.816993 | 4.15E-52 | -1.69E-46 |
| MS.gene052159 | MS.gene96111 | 0.825928 | 3.59E-54 | -1.69E-46 |
| MS.gene052159 | MS.gene99638 | 0.804357 | 2.25E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052159.t1 | MTR_3g100320 | 97.243 | 544 | 15 | 0 | 1 | 544 | 48 | 591 | 0.0 | 1094 |
| MS.gene052159.t1 | MTR_3g100320 | 97.541 | 366 | 9 | 0 | 1 | 366 | 60 | 425 | 0.0 | 745 |
| MS.gene052159.t1 | MTR_3g100280 | 65.703 | 519 | 164 | 6 | 11 | 522 | 69 | 580 | 0.0 | 684 |
| MS.gene052159.t1 | MTR_3g100280 | 68.409 | 421 | 123 | 3 | 108 | 522 | 1 | 417 | 0.0 | 581 |
| MS.gene052159.t1 | MTR_5g032090 | 58.691 | 489 | 188 | 7 | 27 | 506 | 72 | 555 | 0.0 | 581 |
| MS.gene052159.t1 | MTR_3g100300 | 36.410 | 195 | 75 | 9 | 271 | 454 | 143 | 299 | 2.00e-15 | 77.8 |
| MS.gene052159.t1 | MTR_3g099260 | 36.559 | 93 | 56 | 2 | 281 | 373 | 72 | 161 | 2.71e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052159.t1 | AT1G58200 | 55.662 | 521 | 211 | 5 | 17 | 523 | 66 | 580 | 0.0 | 581 |
| MS.gene052159.t1 | AT1G58200 | 55.662 | 521 | 211 | 5 | 17 | 523 | 66 | 580 | 0.0 | 581 |
| MS.gene052159.t1 | AT5G10490 | 54.423 | 520 | 227 | 4 | 18 | 537 | 39 | 548 | 0.0 | 563 |
| MS.gene052159.t1 | AT5G10490 | 54.423 | 520 | 227 | 4 | 18 | 537 | 67 | 576 | 0.0 | 563 |
| MS.gene052159.t1 | AT5G10490 | 54.423 | 520 | 227 | 4 | 18 | 537 | 65 | 574 | 0.0 | 562 |
| MS.gene052159.t1 | AT4G00290 | 26.106 | 226 | 155 | 6 | 180 | 404 | 276 | 490 | 5.90e-13 | 71.6 |
Find 115 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTAGATGATAACAAAATT+TGG | 0.123396 | 3.2:-83606152 | None:intergenic |
| TGCTGCCGTGTCATTGTTTA+TGG | 0.178720 | 3.2:+83603441 | MS.gene052159:CDS |
| ATCCCCGCTCTTGGTATAAT+TGG | 0.180696 | 3.2:+83602207 | MS.gene052159:CDS |
| TGCTCTCGAACGAGTGAAAA+TGG | 0.182392 | 3.2:-83605851 | None:intergenic |
| ATAATTGGCTTTGCTATCTT+TGG | 0.188913 | 3.2:+83602222 | MS.gene052159:CDS |
| ATTAAAGGATATGAGGTTTC+TGG | 0.198213 | 3.2:+83603791 | MS.gene052159:CDS |
| CAACCTTTGCTGCTGTGGAC+TGG | 0.249892 | 3.2:+83602436 | MS.gene052159:CDS |
| AACCTCTCCTACGCCGTTGC+AGG | 0.261064 | 3.2:+83602250 | MS.gene052159:CDS |
| ATTAGATGATAACAAAATTT+GGG | 0.273692 | 3.2:-83606151 | None:intergenic |
| GGGTGATGTTTCTGATTTAG+AGG | 0.275710 | 3.2:-83606130 | None:intergenic |
| AGATTCAGAGGCTAAATTTC+GGG | 0.275982 | 3.2:-83606085 | None:intergenic |
| GGGATTAATTGAAGCATAAT+TGG | 0.279859 | 3.2:-83602189 | None:intergenic |
| GTTGAAGGCTTAGCTTTATA+AGG | 0.287270 | 3.2:-83605907 | None:intergenic |
| AGCTGATATGCGCAAGGTTT+TGG | 0.287823 | 3.2:+83604227 | MS.gene052159:CDS |
| ACAGTATTGCTTTCACTTGC+AGG | 0.308252 | 3.2:+83603514 | MS.gene052159:CDS |
| AACCTTTGCTGCTGTGGACT+GGG | 0.325778 | 3.2:+83602437 | MS.gene052159:CDS |
| ATTCGTGAAACCTTGATAAC+TGG | 0.330316 | 3.2:+83605967 | MS.gene052159:CDS |
| TATCAAGGTTTCACGAATCT+TGG | 0.330485 | 3.2:-83605962 | None:intergenic |
| CGGATTAAAACAAAGATTAA+AGG | 0.332484 | 3.2:+83603776 | MS.gene052159:CDS |
| TCCAGAAAATCAAGCTCTTA+TGG | 0.340918 | 3.2:+83604311 | MS.gene052159:CDS |
| ATAGTAGTTGATTGAGTTGA+AGG | 0.349386 | 3.2:-83605922 | None:intergenic |
| GATTTAGAGGCCTTCTGAAC+TGG | 0.357096 | 3.2:-83606117 | None:intergenic |
| AAGCTGTATATACTGCAGTA+TGG | 0.361800 | 3.2:+83603416 | MS.gene052159:CDS |
| GTGGTTGGCTGCTGGTGGTA+TGG | 0.365271 | 3.2:+83603489 | MS.gene052159:CDS |
| GTCATTGTTTATGGAGTTGT+TGG | 0.376702 | 3.2:+83603450 | MS.gene052159:CDS |
| AAGATTCAGAGGCTAAATTT+CGG | 0.378425 | 3.2:-83606086 | None:intergenic |
| AGCAGCCGTTGCTTTAAAAT+CGG | 0.381438 | 3.2:-83602596 | None:intergenic |
| ATGTTGACTTTAACTTATCC+TGG | 0.383411 | 3.2:-83606050 | None:intergenic |
| AACAAAGATTAAAGGATATG+AGG | 0.385214 | 3.2:+83603784 | MS.gene052159:CDS |
| GTGAAAATGGGGTCGTCAAA+TGG | 0.395728 | 3.2:-83605838 | None:intergenic |
| TTCACACTCAACTTGTGATT+AGG | 0.403461 | 3.2:-83604007 | None:intergenic |
| TGGTTGGCTGCTGGTGGTAT+GGG | 0.409781 | 3.2:+83603490 | MS.gene052159:CDS |
| CTGGGGTAATGCTGCTCTGC+AGG | 0.412173 | 3.2:+83602455 | MS.gene052159:CDS |
| AGGTCATGTAATGCTATATC+AGG | 0.416426 | 3.2:+83602162 | MS.gene052159:intron |
| ATCTTTGAAACCAGTTATCA+AGG | 0.419330 | 3.2:-83605977 | None:intergenic |
| GCTCTCGAACGAGTGAAAAT+GGG | 0.423150 | 3.2:-83605850 | None:intergenic |
| AACAAAACATTACATCTAGA+AGG | 0.427497 | 3.2:-83601241 | None:intergenic |
| CATTTGCCTACTGTTCTTCA+AGG | 0.430153 | 3.2:+83602651 | MS.gene052159:CDS |
| CAGATGAGCATTGATCTTAT+CGG | 0.431050 | 3.2:+83603391 | MS.gene052159:intron |
| ATCCGCTCATTCACAACAAA+TGG | 0.433039 | 3.2:-83603758 | None:intergenic |
| CGGTCTGCCTTGGTACCGGC+TGG | 0.433778 | 3.2:+83601268 | MS.gene052159:CDS |
| ACAAGCACAAAATTTCTGTA+TGG | 0.439246 | 3.2:+83603091 | MS.gene052159:CDS |
| ATAACTGGTTTCAAAGATGA+AGG | 0.457024 | 3.2:+83605982 | MS.gene052159:CDS |
| TTCAGTGGAACGATAAAAGT+TGG | 0.457315 | 3.2:+83602374 | MS.gene052159:intron |
| TTATAAGGTGAATTTGTGAA+TGG | 0.457800 | 3.2:-83605892 | None:intergenic |
| TATAAGGTGAATTTGTGAAT+GGG | 0.464354 | 3.2:-83605891 | None:intergenic |
| AGATGAGCATTGATCTTATC+GGG | 0.466557 | 3.2:+83603392 | MS.gene052159:intron |
| TTCACTCGTTCGAGAGCAAA+GGG | 0.468144 | 3.2:+83605856 | MS.gene052159:CDS |
| CTTATCCTGGGACTTTACAC+TGG | 0.468864 | 3.2:-83606037 | None:intergenic |
| TGAAGAGTATCTCCGTGTTA+AGG | 0.473513 | 3.2:+83605071 | MS.gene052159:CDS |
| CTTGCGCATATCAGCTATGA+TGG | 0.477938 | 3.2:-83604220 | None:intergenic |
| GCACAGAAGTGGTTGGCTGC+TGG | 0.483881 | 3.2:+83603481 | MS.gene052159:CDS |
| TGGTCACCAACAGTAGTTAG+AGG | 0.488933 | 3.2:+83603959 | MS.gene052159:CDS |
| AAAACAGGAGGCCATTCTCT+TGG | 0.492432 | 3.2:+83605720 | MS.gene052159:intron |
| CTTAGAGTCATCAGTCATCA+TGG | 0.504609 | 3.2:+83605748 | MS.gene052159:CDS |
| CTGAATTGTGCGGATGGGTG+TGG | 0.513236 | 3.2:-83605782 | None:intergenic |
| GTGTCGGTCTGCCTTGGTAC+CGG | 0.515358 | 3.2:+83601264 | MS.gene052159:CDS |
| TTTGTTGTGTCGGTCTGCCT+TGG | 0.519884 | 3.2:+83601258 | MS.gene052159:CDS |
| CTTCAATTAATCCCCGCTCT+TGG | 0.524426 | 3.2:+83602198 | MS.gene052159:CDS |
| TCATTGTTTATGGAGTTGTT+GGG | 0.529134 | 3.2:+83603451 | MS.gene052159:CDS |
| AAGCCAATTATACCAAGAGC+GGG | 0.529821 | 3.2:-83602210 | None:intergenic |
| TGTTGACTTTAACTTATCCT+GGG | 0.529999 | 3.2:-83606049 | None:intergenic |
| CTGGGACTTTACACTGGATG+AGG | 0.533658 | 3.2:-83606031 | None:intergenic |
| TTTCACTCGTTCGAGAGCAA+AGG | 0.537364 | 3.2:+83605855 | MS.gene052159:CDS |
| CTCATCCAGTGTAAAGTCCC+AGG | 0.537833 | 3.2:+83606032 | MS.gene052159:CDS |
| AATCTACCTTGAAGAACAGT+AGG | 0.538559 | 3.2:-83602657 | None:intergenic |
| CATGAATCATCACACTTGAA+AGG | 0.538831 | 3.2:-83603727 | None:intergenic |
| AGCTGTATATACTGCAGTAT+GGG | 0.539129 | 3.2:+83603417 | MS.gene052159:CDS |
| CCGTTGCTTTAAAATCGGAC+TGG | 0.548639 | 3.2:-83602591 | None:intergenic |
| ACCTCTCCTACGCCGTTGCA+GGG | 0.550012 | 3.2:+83602251 | MS.gene052159:CDS |
| TGAGGTTTCTGGTAGAGTTG+AGG | 0.552626 | 3.2:+83603802 | MS.gene052159:CDS |
| ATCTTAGTAAGAAAACTCAT+TGG | 0.552673 | 3.2:+83604041 | MS.gene052159:CDS |
| TTCTGATAATCCAGTTCAGA+AGG | 0.553518 | 3.2:+83606107 | MS.gene052159:CDS |
| TAGAAGGTACAGGCTTATGT+TGG | 0.558063 | 3.2:-83601225 | None:intergenic |
| TGGCTACTGTTTCGTTGTCA+AGG | 0.558304 | 3.2:+83601317 | MS.gene052159:CDS |
| CATCTTCTGAATTGTGCGGA+TGG | 0.559810 | 3.2:-83605788 | None:intergenic |
| GGCCATTTGTTGTGAATGAG+CGG | 0.561264 | 3.2:+83603756 | MS.gene052159:CDS |
| TCAGCACCTCTAACTACTGT+TGG | 0.561707 | 3.2:-83603965 | None:intergenic |
| ACCTTTGCTGCTGTGGACTG+GGG | 0.562252 | 3.2:+83602438 | MS.gene052159:CDS |
| GGATGAGGGCGTCCATGTTG+CGG | 0.563662 | 3.2:-83606016 | None:intergenic |
| TCTAAGAAGATCCAAGAGAA+TGG | 0.567023 | 3.2:-83605731 | None:intergenic |
| TGGGTCTCTCCGCACAGAAG+TGG | 0.571017 | 3.2:+83603470 | MS.gene052159:CDS |
| GGTACCGGCTGGAGCGTGTG+AGG | 0.573244 | 3.2:+83601279 | MS.gene052159:CDS |
| TCTCTCCGCACAGAAGTGGT+TGG | 0.580196 | 3.2:+83603474 | MS.gene052159:CDS |
| TGAGGCTCCGCTGTTGAAAG+TGG | 0.580679 | 3.2:+83601297 | MS.gene052159:CDS |
| ATCTTCTGAATTGTGCGGAT+GGG | 0.581018 | 3.2:-83605787 | None:intergenic |
| ATAGAGCCCTGCAACGGCGT+AGG | 0.581176 | 3.2:-83602257 | None:intergenic |
| CTCTCGAACGAGTGAAAATG+GGG | 0.581916 | 3.2:-83605849 | None:intergenic |
| GCCCTGCAACGGCGTAGGAG+AGG | 0.582945 | 3.2:-83602252 | None:intergenic |
| TCACCTTGCTATCAGTCACT+TGG | 0.584498 | 3.2:+83604075 | MS.gene052159:CDS |
| ACATTACATCTAGAAGGTAC+AGG | 0.584956 | 3.2:-83601235 | None:intergenic |
| ACCCCAGTCCACAGCAGCAA+AGG | 0.591276 | 3.2:-83602439 | None:intergenic |
| AATTTGTGAATGGGAAAGAG+TGG | 0.592121 | 3.2:-83605882 | None:intergenic |
| CATCCAAGTGACTGATAGCA+AGG | 0.593216 | 3.2:-83604078 | None:intergenic |
| GGAGCCTCACACGCTCCAGC+CGG | 0.596349 | 3.2:-83601283 | None:intergenic |
| TCATCAGTCATCATGGAGCT+CGG | 0.597209 | 3.2:+83605755 | MS.gene052159:CDS |
| GCTTTCACTTGCAGGTCGTG+AGG | 0.598539 | 3.2:+83603522 | MS.gene052159:CDS |
| TTCTGTAGCATGTAGGATGG+TGG | 0.601690 | 3.2:+83603939 | MS.gene052159:intron |
| GTGTGATGATTCATGCAACT+CGG | 0.610555 | 3.2:+83603735 | MS.gene052159:CDS |
| TTAGATGATAACAAAATTTG+GGG | 0.623288 | 3.2:-83606150 | None:intergenic |
| TGGATTATCAGAAGATTCAG+AGG | 0.623721 | 3.2:-83606097 | None:intergenic |
| ACACGCTCCAGCCGGTACCA+AGG | 0.634927 | 3.2:-83601275 | None:intergenic |
| CATCATAGCTGATATGCGCA+AGG | 0.643564 | 3.2:+83604221 | MS.gene052159:CDS |
| CAGAAGTGGTTGGCTGCTGG+TGG | 0.645748 | 3.2:+83603484 | MS.gene052159:CDS |
| CAACTCCATAAACAATGACA+CGG | 0.645901 | 3.2:-83603446 | None:intergenic |
| AAAGCCAATTATACCAAGAG+CGG | 0.646228 | 3.2:-83602211 | None:intergenic |
| ACAGTAGGCAAATGTAAGCA+CGG | 0.647849 | 3.2:-83602642 | None:intergenic |
| GGAGAAATAGAGCCCTGCAA+CGG | 0.655517 | 3.2:-83602263 | None:intergenic |
| TGGGACTTTACACTGGATGA+GGG | 0.659785 | 3.2:-83606030 | None:intergenic |
| AATCTAGTCTCACCTTAACA+CGG | 0.682332 | 3.2:-83605083 | None:intergenic |
| AGCAGCCAACCACTTCTGTG+CGG | 0.694661 | 3.2:-83603479 | None:intergenic |
| TGTACATCTTCTGAATTGTG+CGG | 0.699375 | 3.2:-83605792 | None:intergenic |
| AGCCAATTATACCAAGAGCG+GGG | 0.701628 | 3.2:-83602209 | None:intergenic |
| ACAGTAGCCACTTTCAACAG+CGG | 0.712676 | 3.2:-83601304 | None:intergenic |
| AGTTGAGTGTGAATGTTGTG+AGG | 0.723498 | 3.2:+83604017 | MS.gene052159:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACAAAAATAAATAAAAAA+GGG | + | chr3.2:83602801-83602820 | MS.gene052159:intron | 10.0% |
| !!! | TAACATTTTTCTAAAATAAT+GGG | + | chr3.2:83603192-83603211 | MS.gene052159:intron | 10.0% |
| !!! | TACTATCATTATTTTTTATT+TGG | + | chr3.2:83602895-83602914 | MS.gene052159:intron | 10.0% |
| !!! | TAGAATAATTTTCAAAAAAT+AGG | - | chr3.2:83601680-83601699 | None:intergenic | 10.0% |
| !!! | TATTTTTATATCACTTAAAA+TGG | - | chr3.2:83603893-83603912 | None:intergenic | 10.0% |
| !!! | TTTTTTGTAAACATAAAAAT+TGG | - | chr3.2:83605258-83605277 | None:intergenic | 10.0% |
| !! | AAAAAGTAAAAAGTAAATCT+TGG | - | chr3.2:83605312-83605331 | None:intergenic | 15.0% |
| !! | AATTGTTTCATCATAAAATA+TGG | + | chr3.2:83605607-83605626 | MS.gene052159:intron | 15.0% |
| !! | ATGGTATTTAAAAAATTTAC+TGG | + | chr3.2:83604133-83604152 | MS.gene052159:intron | 15.0% |
| !! | ATTAGATGATAACAAAATTT+GGG | - | chr3.2:83606154-83606173 | None:intergenic | 15.0% |
| !! | CACACAAAAATAAATAAAAA+AGG | + | chr3.2:83602800-83602819 | MS.gene052159:intron | 15.0% |
| !! | TGGTATTTAAAAAATTTACT+GGG | + | chr3.2:83604134-83604153 | MS.gene052159:intron | 15.0% |
| !! | TTGTTAGAATTAATGTAAAT+TGG | + | chr3.2:83601399-83601418 | MS.gene052159:intron | 15.0% |
| !!! | AATAATCCTATATATTTTAC+AGG | - | chr3.2:83603293-83603312 | None:intergenic | 15.0% |
| !!! | CATAATTTAATTTAGAGTTT+CGG | - | chr3.2:83601986-83602005 | None:intergenic | 15.0% |
| !!! | CATTTATTTCATTAACATTT+TGG | + | chr3.2:83604886-83604905 | MS.gene052159:intron | 15.0% |
| !!! | GTAACATTTTTCTAAAATAA+TGG | + | chr3.2:83603191-83603210 | MS.gene052159:intron | 15.0% |
| !!! | TTATATTTTGAAATTGATGT+AGG | + | chr3.2:83602142-83602161 | MS.gene052159:intron | 15.0% |
| !!! | TTTTGTCATTTACTTTTTTA+TGG | + | chr3.2:83603597-83603616 | MS.gene052159:intron | 15.0% |
| !! | AAAATTAGATACTAACTTCT+TGG | - | chr3.2:83602287-83602306 | None:intergenic | 20.0% |
| !! | AACAAATGCATAACAAATTT+AGG | - | chr3.2:83605505-83605524 | None:intergenic | 20.0% |
| !! | AATAAGCTTATCTTACAATT+AGG | - | chr3.2:83602749-83602768 | None:intergenic | 20.0% |
| !! | AATTATCTAACTTACTGAAA+AGG | + | chr3.2:83603833-83603852 | MS.gene052159:intron | 20.0% |
| !! | ATAAACCAATTAACAGAAAA+AGG | - | chr3.2:83604343-83604362 | None:intergenic | 20.0% |
| !! | CAAAAATAAATAAAAAAGGG+AGG | + | chr3.2:83602804-83602823 | MS.gene052159:intron | 20.0% |
| !! | CACATAATAGCTTATTATAT+AGG | + | chr3.2:83605395-83605414 | MS.gene052159:intron | 20.0% |
| !! | CATTAGATGATAACAAAATT+TGG | - | chr3.2:83606155-83606174 | None:intergenic | 20.0% |
| !! | GTGTAATTATTATGGTAATT+AGG | + | chr3.2:83601441-83601460 | MS.gene052159:intron | 20.0% |
| !! | TAAAAATTGGTGAAAAATTG+AGG | - | chr3.2:83605245-83605264 | None:intergenic | 20.0% |
| !! | TAATGTAAATTGGACAATTA+TGG | + | chr3.2:83601409-83601428 | MS.gene052159:intron | 20.0% |
| !! | TATTGTATTTAGGAATTAGT+AGG | - | chr3.2:83602109-83602128 | None:intergenic | 20.0% |
| !! | TTAGATGATAACAAAATTTG+GGG | - | chr3.2:83606153-83606172 | None:intergenic | 20.0% |
| !! | TTGTCAAATTATACTATGAT+AGG | + | chr3.2:83604779-83604798 | MS.gene052159:intron | 20.0% |
| !!! | AATTTTTTTTGTTCTACTAG+AGG | - | chr3.2:83604261-83604280 | None:intergenic | 20.0% |
| !!! | GTGATATAAAAATAGTTTTC+TGG | + | chr3.2:83603899-83603918 | MS.gene052159:intron | 20.0% |
| !!! | TATATTCAAGTCATTTTGTT+CGG | + | chr3.2:83605646-83605665 | MS.gene052159:intron | 20.0% |
| ! | AACAAAAAAAATTGCACAGA+AGG | + | chr3.2:83604268-83604287 | MS.gene052159:CDS | 25.0% |
| ! | AACAAAACATTACATCTAGA+AGG | - | chr3.2:83601244-83601263 | None:intergenic | 25.0% |
| ! | AACAAAGATTAAAGGATATG+AGG | + | chr3.2:83603784-83603803 | MS.gene052159:CDS | 25.0% |
| ! | ACAAAAAAAATTGCACAGAA+GGG | + | chr3.2:83604269-83604288 | MS.gene052159:CDS | 25.0% |
| ! | AGTCAACCTGTAAAATATAT+AGG | + | chr3.2:83603284-83603303 | MS.gene052159:intron | 25.0% |
| ! | ATCTTAGTAAGAAAACTCAT+TGG | + | chr3.2:83604041-83604060 | MS.gene052159:CDS | 25.0% |
| ! | CCAATGATTGATAAATTACT+AGG | - | chr3.2:83604828-83604847 | None:intergenic | 25.0% |
| ! | CCTAAATACAATATCTATGA+AGG | + | chr3.2:83602116-83602135 | MS.gene052159:intron | 25.0% |
| ! | CCTAGTAAAAAATTCTACAA+AGG | - | chr3.2:83604567-83604586 | None:intergenic | 25.0% |
| ! | CCTAGTAATTTATCAATCAT+TGG | + | chr3.2:83604825-83604844 | MS.gene052159:intron | 25.0% |
| ! | CCTTCATAGATATTGTATTT+AGG | - | chr3.2:83602119-83602138 | None:intergenic | 25.0% |
| ! | CGGATTAAAACAAAGATTAA+AGG | + | chr3.2:83603776-83603795 | MS.gene052159:CDS | 25.0% |
| ! | CTACTATTCTAATCTTCATT+TGG | - | chr3.2:83603266-83603285 | None:intergenic | 25.0% |
| ! | CTTATTATATAGGCTGATAT+CGG | + | chr3.2:83605405-83605424 | MS.gene052159:intron | 25.0% |
| ! | CTTCAAACACATAATAGTAA+TGG | - | chr3.2:83603015-83603034 | None:intergenic | 25.0% |
| ! | GAAAATTATTCTACTTGCAA+TGG | + | chr3.2:83601687-83601706 | MS.gene052159:intron | 25.0% |
| ! | GAAACAATAGTAATGTAATG+AGG | - | chr3.2:83605466-83605485 | None:intergenic | 25.0% |
| ! | GCATCAAATGATATGATTTA+TGG | - | chr3.2:83602045-83602064 | None:intergenic | 25.0% |
| ! | TAATATCTGCAACAGAAAAA+GGG | - | chr3.2:83605022-83605041 | None:intergenic | 25.0% |
| ! | TAATTTCCATGTGATAAAAC+AGG | + | chr3.2:83605705-83605724 | MS.gene052159:intron | 25.0% |
| ! | TATAAGGTGAATTTGTGAAT+GGG | - | chr3.2:83605894-83605913 | None:intergenic | 25.0% |
| ! | TTATAAGGTGAATTTGTGAA+TGG | - | chr3.2:83605895-83605914 | None:intergenic | 25.0% |
| ! | TTCCACAATGTTAATTATGA+GGG | + | chr3.2:83603313-83603332 | MS.gene052159:intron | 25.0% |
| ! | TTTCCACAATGTTAATTATG+AGG | + | chr3.2:83603312-83603331 | MS.gene052159:intron | 25.0% |
| ! | TTTCCATCATGCAATAAAAT+TGG | + | chr3.2:83601555-83601574 | MS.gene052159:intron | 25.0% |
| ! | TTTCTTCTTCAAATTACTCT+CGG | + | chr3.2:83605332-83605351 | MS.gene052159:intron | 25.0% |
| !! | AAACACATAATAGTAATGGA+TGG | - | chr3.2:83603011-83603030 | None:intergenic | 25.0% |
| !! | AAACCAATTTTATTGCATGA+TGG | - | chr3.2:83601561-83601580 | None:intergenic | 25.0% |
| !! | GGAATAAAAAAGTATAGACA+CGG | + | chr3.2:83602825-83602844 | MS.gene052159:intron | 25.0% |
| !! | GTATAATTTGACAACCATTT+TGG | - | chr3.2:83604773-83604792 | None:intergenic | 25.0% |
| !! | TACTTTTCTTTCATTGTTGT+CGG | - | chr3.2:83603126-83603145 | None:intergenic | 25.0% |
| !! | TATTTTCTTGAGATTTGTGT+CGG | + | chr3.2:83601864-83601883 | MS.gene052159:intron | 25.0% |
| !! | TGATACCTTTTTCTGTTAAT+TGG | + | chr3.2:83604335-83604354 | MS.gene052159:intron | 25.0% |
| !!! | AACACATAATAGTAATGGAT+GGG | - | chr3.2:83603010-83603029 | None:intergenic | 25.0% |
| !!! | AGAAAGTATCAACTATCAAA+GGG | - | chr3.2:83603558-83603577 | None:intergenic | 25.0% |
| !!! | ATTTTATTGCATGATGGAAA+AGG | - | chr3.2:83601555-83601574 | None:intergenic | 25.0% |
| !!! | CCTTTGTAGAATTTTTTACT+AGG | + | chr3.2:83604564-83604583 | MS.gene052159:intron | 25.0% |
| !!! | TAGAAAGTATCAACTATCAA+AGG | - | chr3.2:83603559-83603578 | None:intergenic | 25.0% |
| !!! | TGCAATAAAATTGGTTTGTT+TGG | + | chr3.2:83601564-83601583 | MS.gene052159:intron | 25.0% |
| !!! | TTGATAACATATGTTTTCAG+TGG | + | chr3.2:83602359-83602378 | MS.gene052159:intron | 25.0% |
| !!! | TTTTTTTCATCTTGCTTTGA+TGG | - | chr3.2:83606186-83606205 | None:intergenic | 25.0% |
| AAGATTCAGAGGCTAAATTT+CGG | - | chr3.2:83606089-83606108 | None:intergenic | 30.0% | |
| AAGGGAAGAAAATAAGATAC+TGG | - | chr3.2:83604391-83604410 | None:intergenic | 30.0% | |
| AAGTAGAGCAGAAAGATAAT+AGG | - | chr3.2:83604936-83604955 | None:intergenic | 30.0% | |
| ACAAGCACAAAATTTCTGTA+TGG | + | chr3.2:83603091-83603110 | MS.gene052159:CDS | 30.0% | |
| ACATGGCAAAGATATGTAAA+AGG | - | chr3.2:83603153-83603172 | None:intergenic | 30.0% | |
| AGATAGCTAATTGTGTACAA+TGG | - | chr3.2:83601777-83601796 | None:intergenic | 30.0% | |
| AGTAGAGCAGAAAGATAATA+GGG | - | chr3.2:83604935-83604954 | None:intergenic | 30.0% | |
| ATAACTCTGACTAAAGTCAA+AGG | + | chr3.2:83604650-83604669 | MS.gene052159:intron | 30.0% | |
| ATCAATCATTGGAATCTGAT+TGG | + | chr3.2:83604836-83604855 | MS.gene052159:intron | 30.0% | |
| ATTAAAGGATATGAGGTTTC+TGG | + | chr3.2:83603791-83603810 | MS.gene052159:CDS | 30.0% | |
| CTAAAAGGAAAACCAAAGTT+TGG | - | chr3.2:83601909-83601928 | None:intergenic | 30.0% | |
| CTAATATCTGCAACAGAAAA+AGG | - | chr3.2:83605023-83605042 | None:intergenic | 30.0% | |
| GGGATTAATTGAAGCATAAT+TGG | - | chr3.2:83602192-83602211 | None:intergenic | 30.0% | |
| GGTTATGACTTATGATTGAA+AGG | + | chr3.2:83601708-83601727 | MS.gene052159:intron | 30.0% | |
| TAAATTGGACAATTATGGAC+TGG | + | chr3.2:83601414-83601433 | MS.gene052159:intron | 30.0% | |
| TCATCTGTTTCATTCCAAAA+TGG | + | chr3.2:83604756-83604775 | MS.gene052159:intron | 30.0% | |
| TCATTGTTTATGGAGTTGTT+GGG | + | chr3.2:83603451-83603470 | MS.gene052159:CDS | 30.0% | |
| TTAGAAACCTGATTCAACTA+CGG | - | chr3.2:83604631-83604650 | None:intergenic | 30.0% | |
| TTTAGGCTACACAATATTTC+TGG | - | chr3.2:83605488-83605507 | None:intergenic | 30.0% | |
| TTTGTTCGGTTAACTGTTAA+GGG | + | chr3.2:83605660-83605679 | MS.gene052159:intron | 30.0% | |
| ! | AAAAGCTTTTGTAAGCATTC+TGG | - | chr3.2:83604727-83604746 | None:intergenic | 30.0% |
| ! | AATTTACTGGGATTTTCTGA+TGG | + | chr3.2:83604146-83604165 | MS.gene052159:intron | 30.0% |
| ! | ATAACTGGTTTCAAAGATGA+AGG | + | chr3.2:83605982-83606001 | MS.gene052159:CDS | 30.0% |
| ! | ATTTTCTTGAGATTTGTGTC+GGG | + | chr3.2:83601865-83601884 | MS.gene052159:intron | 30.0% |
| ! | TCATATTTTCTGTAGCATGT+AGG | + | chr3.2:83603932-83603951 | MS.gene052159:intron | 30.0% |
| ! | TTGTTCTACTAGAGGATTTT+TGG | - | chr3.2:83604253-83604272 | None:intergenic | 30.0% |
| ! | TTTAATTTAGAGTTTCGGTG+CGG | - | chr3.2:83601981-83602000 | None:intergenic | 30.0% |
| ! | TTTTGTTCGGTTAACTGTTA+AGG | + | chr3.2:83605659-83605678 | MS.gene052159:intron | 30.0% |
| !! | AACTCATCTAAAGCTTTAAG+TGG | - | chr3.2:83603235-83603254 | None:intergenic | 30.0% |
| !! | ATAATTGGCTTTGCTATCTT+TGG | + | chr3.2:83602222-83602241 | MS.gene052159:CDS | 30.0% |
| !! | ATAGTAGTTGATTGAGTTGA+AGG | - | chr3.2:83605925-83605944 | None:intergenic | 30.0% |
| !! | ATCTTTGAAACCAGTTATCA+AGG | - | chr3.2:83605980-83605999 | None:intergenic | 30.0% |
| !! | ATGTTGACTTTAACTTATCC+TGG | - | chr3.2:83606053-83606072 | None:intergenic | 30.0% |
| !! | GATGTAATGTTTTGTTGTGT+CGG | + | chr3.2:83601248-83601267 | MS.gene052159:CDS | 30.0% |
| !! | TGTTGACTTTAACTTATCCT+GGG | - | chr3.2:83606052-83606071 | None:intergenic | 30.0% |
| !!! | CAAACTTTGGTTTTCCTTTT+AGG | + | chr3.2:83601907-83601926 | MS.gene052159:intron | 30.0% |
| !!! | CTTGTTGCTTTTGTACATTT+TGG | + | chr3.2:83605440-83605459 | MS.gene052159:intron | 30.0% |
| AAAGCCAATTATACCAAGAG+CGG | - | chr3.2:83602214-83602233 | None:intergenic | 35.0% | |
| AAGCTGTATATACTGCAGTA+TGG | + | chr3.2:83603416-83603435 | MS.gene052159:CDS | 35.0% | |
| AATCTACCTTGAAGAACAGT+AGG | - | chr3.2:83602660-83602679 | None:intergenic | 35.0% | |
| AATCTAGTCTCACCTTAACA+CGG | - | chr3.2:83605086-83605105 | None:intergenic | 35.0% | |
| AATTTGTGAATGGGAAAGAG+TGG | - | chr3.2:83605885-83605904 | None:intergenic | 35.0% | |
| ACAGAAGTTTCGTCATTCAT+TGG | + | chr3.2:83601368-83601387 | MS.gene052159:intron | 35.0% | |
| AGAACCAAGACTGAAGATAA+AGG | - | chr3.2:83604410-83604429 | None:intergenic | 35.0% | |
| AGATTCAGAGGCTAAATTTC+GGG | - | chr3.2:83606088-83606107 | None:intergenic | 35.0% | |
| AGCAAAACCATAGGGTTAAA+TGG | - | chr3.2:83604590-83604609 | None:intergenic | 35.0% | |
| AGCAACTCAATTGTATTAGC+TGG | + | chr3.2:83605217-83605236 | MS.gene052159:intron | 35.0% | |
| AGCTAATTGTGTACAATGGT+TGG | - | chr3.2:83601773-83601792 | None:intergenic | 35.0% | |
| AGCTGTATATACTGCAGTAT+GGG | + | chr3.2:83603417-83603436 | MS.gene052159:CDS | 35.0% | |
| AGGAATTAGTAGGCTGAAAA+AGG | - | chr3.2:83602099-83602118 | None:intergenic | 35.0% | |
| AGGACTTGACAAACTTTCAA+CGG | - | chr3.2:83602507-83602526 | None:intergenic | 35.0% | |
| AGGCAATACATAAATGACAC+AGG | - | chr3.2:83604808-83604827 | None:intergenic | 35.0% | |
| AGGTCATGTAATGCTATATC+AGG | + | chr3.2:83602162-83602181 | MS.gene052159:intron | 35.0% | |
| ATGTTACACACACACATGAA+TGG | - | chr3.2:83603178-83603197 | None:intergenic | 35.0% | |
| ATTATGTCCACAGTTGTTGT+CGG | + | chr3.2:83602694-83602713 | MS.gene052159:intron | 35.0% | |
| CAACTCCATAAACAATGACA+CGG | - | chr3.2:83603449-83603468 | None:intergenic | 35.0% | |
| CACCCTCATAATTAACATTG+TGG | - | chr3.2:83603318-83603337 | None:intergenic | 35.0% | |
| CATGAATCATCACACTTGAA+AGG | - | chr3.2:83603730-83603749 | None:intergenic | 35.0% | |
| CTAGAAATGTAAACAAGCAG+AGG | - | chr3.2:83604538-83604557 | None:intergenic | 35.0% | |
| CTGGACTCGTGTAATTATTA+TGG | + | chr3.2:83601433-83601452 | MS.gene052159:intron | 35.0% | |
| GAACCAAGACTGAAGATAAA+GGG | - | chr3.2:83604409-83604428 | None:intergenic | 35.0% | |
| GCTAATTGTGTACAATGGTT+GGG | - | chr3.2:83601772-83601791 | None:intergenic | 35.0% | |
| GGCGCAAGATATTAATAGTA+TGG | - | chr3.2:83602728-83602747 | None:intergenic | 35.0% | |
| GTCATTGTTTATGGAGTTGT+TGG | + | chr3.2:83603450-83603469 | MS.gene052159:CDS | 35.0% | |
| TATCAAGGTTTCACGAATCT+TGG | - | chr3.2:83605965-83605984 | None:intergenic | 35.0% | |
| TCCAGAAAATCAAGCTCTTA+TGG | + | chr3.2:83604311-83604330 | MS.gene052159:CDS | 35.0% | |
| TCTAAGAAGATCCAAGAGAA+TGG | - | chr3.2:83605734-83605753 | None:intergenic | 35.0% | |
| TGAATAGCAGCAAAACCATA+GGG | - | chr3.2:83604598-83604617 | None:intergenic | 35.0% | |
| TGGATTATCAGAAGATTCAG+AGG | - | chr3.2:83606100-83606119 | None:intergenic | 35.0% | |
| TGTACATCTTCTGAATTGTG+CGG | - | chr3.2:83605795-83605814 | None:intergenic | 35.0% | |
| TTACCATACGAAAGGATGAT+GGG | - | chr3.2:83601836-83601855 | None:intergenic | 35.0% | |
| TTCACACTCAACTTGTGATT+AGG | - | chr3.2:83604010-83604029 | None:intergenic | 35.0% | |
| TTCAGTGGAACGATAAAAGT+TGG | + | chr3.2:83602374-83602393 | MS.gene052159:intron | 35.0% | |
| TTCTGATAATCCAGTTCAGA+AGG | + | chr3.2:83606107-83606126 | MS.gene052159:CDS | 35.0% | |
| TTTCCATGTGATAAAACAGG+AGG | + | chr3.2:83605708-83605727 | MS.gene052159:intron | 35.0% | |
| ! | AAAGTACCAATTAGGCTTGT+AGG | + | chr3.2:83604483-83604502 | MS.gene052159:intron | 35.0% |
| ! | ACATTACATCTAGAAGGTAC+AGG | - | chr3.2:83601238-83601257 | None:intergenic | 35.0% |
| ! | ACCATAAGAGCTTGATTTTC+TGG | - | chr3.2:83604315-83604334 | None:intergenic | 35.0% |
| ! | ATTCGTGAAACCTTGATAAC+TGG | + | chr3.2:83605967-83605986 | MS.gene052159:CDS | 35.0% |
| ! | ATTTTCTGTAGCATGTAGGA+TGG | + | chr3.2:83603936-83603955 | MS.gene052159:intron | 35.0% |
| ! | CAATTGCTTTAGACAACACA+TGG | - | chr3.2:83602313-83602332 | None:intergenic | 35.0% |
| !! | AGATGAGCATTGATCTTATC+GGG | + | chr3.2:83603392-83603411 | MS.gene052159:intron | 35.0% |
| !! | CAGATGAGCATTGATCTTAT+CGG | + | chr3.2:83603391-83603410 | MS.gene052159:intron | 35.0% |
| !! | GGTTCTGAAAGGAAGTTATA+AGG | + | chr3.2:83604424-83604443 | MS.gene052159:intron | 35.0% |
| !! | GTTGAAGGCTTAGCTTTATA+AGG | - | chr3.2:83605910-83605929 | None:intergenic | 35.0% |
| !!! | GCACTGTTGTTTTTACATGT+AGG | - | chr3.2:83601652-83601671 | None:intergenic | 35.0% |
| !!! | TTTGGTTTTCCTTTTAGGAG+AGG | + | chr3.2:83601912-83601931 | MS.gene052159:intron | 35.0% |
| AAAATGGAAACCACTCACGT+TGG | - | chr3.2:83603877-83603896 | None:intergenic | 40.0% | |
| AAACTTCTGTCAGCTACGAA+AGG | - | chr3.2:83601358-83601377 | None:intergenic | 40.0% | |
| AAAGGCTTTCTTTGACATGC+TGG | + | chr3.2:83601726-83601745 | MS.gene052159:intron | 40.0% | |
| AAGATTGATGTGAGTGCTCT+TGG | + | chr3.2:83604106-83604125 | MS.gene052159:intron | 40.0% | |
| AAGCCAATTATACCAAGAGC+GGG | - | chr3.2:83602213-83602232 | None:intergenic | 40.0% | |
| AAGGCTTTCTTTGACATGCT+GGG | + | chr3.2:83601727-83601746 | MS.gene052159:intron | 40.0% | |
| ACAGTAGGCAAATGTAAGCA+CGG | - | chr3.2:83602645-83602664 | None:intergenic | 40.0% | |
| ACAGTATTGCTTTCACTTGC+AGG | + | chr3.2:83603514-83603533 | MS.gene052159:CDS | 40.0% | |
| ACCTTGACGTAAACTGTTTC+AGG | + | chr3.2:83602537-83602556 | MS.gene052159:intron | 40.0% | |
| ACGTCAAGGTGCATACAAAT+AGG | - | chr3.2:83602527-83602546 | None:intergenic | 40.0% | |
| AGGTATCTTTCTGGATCAGA+AGG | + | chr3.2:83602475-83602494 | MS.gene052159:intron | 40.0% | |
| AGTTGAGTGTGAATGTTGTG+AGG | + | chr3.2:83604017-83604036 | MS.gene052159:CDS | 40.0% | |
| ATCCGCTCATTCACAACAAA+TGG | - | chr3.2:83603761-83603780 | None:intergenic | 40.0% | |
| ATCTTCTGAATTGTGCGGAT+GGG | - | chr3.2:83605790-83605809 | None:intergenic | 40.0% | |
| ATGCTATGAGATGCATCTCA+AGG | - | chr3.2:83604454-83604473 | None:intergenic | 40.0% | |
| ATGTACAAAAGCAACAAGCC+TGG | - | chr3.2:83605438-83605457 | None:intergenic | 40.0% | |
| CACACACATGAATGGAAACA+TGG | - | chr3.2:83603170-83603189 | None:intergenic | 40.0% | |
| CATTTGCCTACTGTTCTTCA+AGG | + | chr3.2:83602651-83602670 | MS.gene052159:CDS | 40.0% | |
| CCTTGACGTAAACTGTTTCA+GGG | + | chr3.2:83602538-83602557 | MS.gene052159:intron | 40.0% | |
| CTAGATTGACGATAGCAACT+TGG | + | chr3.2:83605099-83605118 | MS.gene052159:intron | 40.0% | |
| CTTAGAGTCATCAGTCATCA+TGG | + | chr3.2:83605748-83605767 | MS.gene052159:CDS | 40.0% | |
| CTTCCCTTTATCTTCAGTCT+TGG | + | chr3.2:83604403-83604422 | MS.gene052159:intron | 40.0% | |
| CTTGACGTAAACTGTTTCAG+GGG | + | chr3.2:83602539-83602558 | MS.gene052159:intron | 40.0% | |
| GAGCTTTGCATTTACATTCC+AGG | - | chr3.2:83603343-83603362 | None:intergenic | 40.0% | |
| GCTATCGCATCTTAAAACTG+AGG | + | chr3.2:83604168-83604187 | MS.gene052159:intron | 40.0% | |
| GTGAAAAAATTGCCGCAACA+TGG | + | chr3.2:83606004-83606023 | MS.gene052159:CDS | 40.0% | |
| GTGAATAGCAGCAAAACCAT+AGG | - | chr3.2:83604599-83604618 | None:intergenic | 40.0% | |
| GTGTGATGATTCATGCAACT+CGG | + | chr3.2:83603735-83603754 | MS.gene052159:CDS | 40.0% | |
| GTTACCATACGAAAGGATGA+TGG | - | chr3.2:83601837-83601856 | None:intergenic | 40.0% | |
| TACTAGGCCATTTAACCCTA+TGG | + | chr3.2:83604580-83604599 | MS.gene052159:intron | 40.0% | |
| TCCTTAAGAGCAACTCTTCA+CGG | + | chr3.2:83603649-83603668 | MS.gene052159:intron | 40.0% | |
| TGACAGAGTTATCAGTGCAT+AGG | - | chr3.2:83601618-83601637 | None:intergenic | 40.0% | |
| TGAGAGAGTTACCATACGAA+AGG | - | chr3.2:83601844-83601863 | None:intergenic | 40.0% | |
| TGGAGGAGTGAGTAGTTATT+GGG | + | chr3.2:83601944-83601963 | MS.gene052159:intron | 40.0% | |
| TGTGAGTGCTCTTGGTTTAA+TGG | + | chr3.2:83604114-83604133 | MS.gene052159:intron | 40.0% | |
| TTTCCCATCATCCTTTCGTA+TGG | + | chr3.2:83601830-83601849 | MS.gene052159:intron | 40.0% | |
| ! | ATTGCACAGAAGGGTTTTTC+TGG | + | chr3.2:83604278-83604297 | MS.gene052159:CDS | 40.0% |
| ! | ATTTTCAACCTTTGCTGCTG+TGG | + | chr3.2:83602431-83602450 | MS.gene052159:CDS | 40.0% |
| ! | GGGTGATGTTTCTGATTTAG+AGG | - | chr3.2:83606133-83606152 | None:intergenic | 40.0% |
| ! | TAGAAGGTACAGGCTTATGT+TGG | - | chr3.2:83601228-83601247 | None:intergenic | 40.0% |
| !! | AGCAGCCGTTGCTTTAAAAT+CGG | - | chr3.2:83602599-83602618 | None:intergenic | 40.0% |
| !! | GATGATGGGAAATAACCATG+CGG | - | chr3.2:83601822-83601841 | None:intergenic | 40.0% |
| !! | GTTTTTGATTGCACGACTAG+TGG | - | chr3.2:83602572-83602591 | None:intergenic | 40.0% |
| !! | TCTTCAGTCTTGGTTCTGAA+AGG | + | chr3.2:83604413-83604432 | MS.gene052159:intron | 40.0% |
| !! | TGAAGAGTATCTCCGTGTTA+AGG | + | chr3.2:83605071-83605090 | MS.gene052159:CDS | 40.0% |
| !!! | CCAGTCCGATTTTAAAGCAA+CGG | + | chr3.2:83602591-83602610 | MS.gene052159:CDS | 40.0% |
| AAAACAGGAGGCCATTCTCT+TGG | + | chr3.2:83605720-83605739 | MS.gene052159:intron | 45.0% | |
| AAATGCTTCATTGCCGCCAT+GGG | - | chr3.2:83604871-83604890 | None:intergenic | 45.0% | |
| AGCCAATTATACCAAGAGCG+GGG | - | chr3.2:83602212-83602231 | None:intergenic | 45.0% | |
| ATCCCCGCTCTTGGTATAAT+TGG | + | chr3.2:83602207-83602226 | MS.gene052159:CDS | 45.0% | |
| ATGCATCTCATAGCATAGCC+AGG | + | chr3.2:83604458-83604477 | MS.gene052159:intron | 45.0% | |
| ATTGCCACCGTAGTTGAATC+AGG | + | chr3.2:83604621-83604640 | MS.gene052159:intron | 45.0% | |
| CATCATAGCTGATATGCGCA+AGG | + | chr3.2:83604221-83604240 | MS.gene052159:CDS | 45.0% | |
| CATCCAAGTGACTGATAGCA+AGG | - | chr3.2:83604081-83604100 | None:intergenic | 45.0% | |
| CATCTTCTGAATTGTGCGGA+TGG | - | chr3.2:83605791-83605810 | None:intergenic | 45.0% | |
| CCCTGAAACAGTTTACGTCA+AGG | - | chr3.2:83602541-83602560 | None:intergenic | 45.0% | |
| CTACAGCCTACAAGCCTAAT+TGG | - | chr3.2:83604492-83604511 | None:intergenic | 45.0% | |
| CTCTCGAACGAGTGAAAATG+GGG | - | chr3.2:83605852-83605871 | None:intergenic | 45.0% | |
| CTTATCCTGGGACTTTACAC+TGG | - | chr3.2:83606040-83606059 | None:intergenic | 45.0% | |
| CTTCAATTAATCCCCGCTCT+TGG | + | chr3.2:83602198-83602217 | MS.gene052159:CDS | 45.0% | |
| CTTGCGCATATCAGCTATGA+TGG | - | chr3.2:83604223-83604242 | None:intergenic | 45.0% | |
| GAAACCTGATTCAACTACGG+TGG | - | chr3.2:83604628-83604647 | None:intergenic | 45.0% | |
| GATTTAGAGGCCTTCTGAAC+TGG | - | chr3.2:83606120-83606139 | None:intergenic | 45.0% | |
| GCTCTCGAACGAGTGAAAAT+GGG | - | chr3.2:83605853-83605872 | None:intergenic | 45.0% | |
| GTGAAAATGGGGTCGTCAAA+TGG | - | chr3.2:83605841-83605860 | None:intergenic | 45.0% | |
| GTGGAGGAGTGAGTAGTTAT+TGG | + | chr3.2:83601943-83601962 | MS.gene052159:intron | 45.0% | |
| TAAATGCTTCATTGCCGCCA+TGG | - | chr3.2:83604872-83604891 | None:intergenic | 45.0% | |
| TCAGCACCTCTAACTACTGT+TGG | - | chr3.2:83603968-83603987 | None:intergenic | 45.0% | |
| TCATCAGTCATCATGGAGCT+CGG | + | chr3.2:83605755-83605774 | MS.gene052159:CDS | 45.0% | |
| TGCATCTCATAGCATAGCCA+GGG | + | chr3.2:83604459-83604478 | MS.gene052159:intron | 45.0% | |
| TGCTCTCGAACGAGTGAAAA+TGG | - | chr3.2:83605854-83605873 | None:intergenic | 45.0% | |
| TGGCTACTGTTTCGTTGTCA+AGG | + | chr3.2:83601317-83601336 | MS.gene052159:CDS | 45.0% | |
| TGGGACTTTACACTGGATGA+GGG | - | chr3.2:83606033-83606052 | None:intergenic | 45.0% | |
| TGGTCACCAACAGTAGTTAG+AGG | + | chr3.2:83603959-83603978 | MS.gene052159:CDS | 45.0% | |
| TTCACTCGTTCGAGAGCAAA+GGG | + | chr3.2:83605856-83605875 | MS.gene052159:CDS | 45.0% | |
| TTCTGTAGCATGTAGGATGG+TGG | + | chr3.2:83603939-83603958 | MS.gene052159:intron | 45.0% | |
| TTTCACTCGTTCGAGAGCAA+AGG | + | chr3.2:83605855-83605874 | MS.gene052159:CDS | 45.0% | |
| ! | ACAGTAGCCACTTTCAACAG+CGG | - | chr3.2:83601307-83601326 | None:intergenic | 45.0% |
| ! | AGCTGATATGCGCAAGGTTT+TGG | + | chr3.2:83604227-83604246 | MS.gene052159:CDS | 45.0% |
| ! | GACTTTGTGGTGCCAAACTT+TGG | + | chr3.2:83601894-83601913 | MS.gene052159:intron | 45.0% |
| ! | TCACCTTGCTATCAGTCACT+TGG | + | chr3.2:83604075-83604094 | MS.gene052159:CDS | 45.0% |
| ! | TGATTGGCTATCTTCACCCA+TGG | + | chr3.2:83604852-83604871 | MS.gene052159:intron | 45.0% |
| ! | TGCTGCCGTGTCATTGTTTA+TGG | + | chr3.2:83603441-83603460 | MS.gene052159:CDS | 45.0% |
| ! | TGGCCTCCTGTTTTATCACA+TGG | - | chr3.2:83605714-83605733 | None:intergenic | 45.0% |
| ! | TTTAGAGTTTCGGTGCGGTT+CGG | - | chr3.2:83601976-83601995 | None:intergenic | 45.0% |
| !! | CCGTTGCTTTAAAATCGGAC+TGG | - | chr3.2:83602594-83602613 | None:intergenic | 45.0% |
| !! | GGCCATTTGTTGTGAATGAG+CGG | + | chr3.2:83603756-83603775 | MS.gene052159:CDS | 45.0% |
| !! | GGTTTTCCTTTTAGGAGAGG+CGG | + | chr3.2:83601915-83601934 | MS.gene052159:intron | 45.0% |
| !! | GTTAATTATGAGGGTGCTCC+TGG | + | chr3.2:83603322-83603341 | MS.gene052159:intron | 45.0% |
| !! | TGAGGTTTCTGGTAGAGTTG+AGG | + | chr3.2:83603802-83603821 | MS.gene052159:CDS | 45.0% |
| AACCTTTGCTGCTGTGGACT+GGG | + | chr3.2:83602437-83602456 | MS.gene052159:CDS | 50.0% | |
| AGGCTTGTAGGCTGTAGCTA+TGG | + | chr3.2:83604495-83604514 | MS.gene052159:intron | 50.0% | |
| CACAAAAGCTTCAGACCGCA+TGG | + | chr3.2:83601804-83601823 | MS.gene052159:intron | 50.0% | |
| CTCATCCAGTGTAAAGTCCC+AGG | + | chr3.2:83606032-83606051 | MS.gene052159:CDS | 50.0% | |
| CTGCTCTGCAGGTATCTTTC+TGG | + | chr3.2:83602466-83602485 | MS.gene052159:intron | 50.0% | |
| CTGGGACTTTACACTGGATG+AGG | - | chr3.2:83606034-83606053 | None:intergenic | 50.0% | |
| GCAGGTCGTGAGGTACAATA+AGG | + | chr3.2:83603532-83603551 | MS.gene052159:intron | 50.0% | |
| GCCGTGAAGAGTTGCTCTTA+AGG | - | chr3.2:83603653-83603672 | None:intergenic | 50.0% | |
| GCCTAATTGGTACTTTGCCC+TGG | - | chr3.2:83604479-83604498 | None:intergenic | 50.0% | |
| GCTGATATCGGAGATTGTCC+AGG | + | chr3.2:83605417-83605436 | MS.gene052159:intron | 50.0% | |
| GGAGAAATAGAGCCCTGCAA+CGG | - | chr3.2:83602266-83602285 | None:intergenic | 50.0% | |
| TAGAACGCCGACAACAACTG+TGG | - | chr3.2:83602704-83602723 | None:intergenic | 50.0% | |
| TTGGCTATCTTCACCCATGG+CGG | + | chr3.2:83604855-83604874 | MS.gene052159:intron | 50.0% | |
| ! | GCACAGAAGGGTTTTTCTGG+AGG | + | chr3.2:83604281-83604300 | MS.gene052159:CDS | 50.0% |
| ! | GCCAGGGCAAAGTACCAATT+AGG | + | chr3.2:83604475-83604494 | MS.gene052159:intron | 50.0% |
| ! | TTTGTTGTGTCGGTCTGCCT+TGG | + | chr3.2:83601258-83601277 | MS.gene052159:CDS | 50.0% |
| !! | TTTCCTTTTAGGAGAGGCGG+TGG | + | chr3.2:83601918-83601937 | MS.gene052159:intron | 50.0% |
| AGCAGCCAACCACTTCTGTG+CGG | - | chr3.2:83603482-83603501 | None:intergenic | 55.0% | |
| CAACCTTTGCTGCTGTGGAC+TGG | + | chr3.2:83602436-83602455 | MS.gene052159:CDS | 55.0% | |
| CTGAATTGTGCGGATGGGTG+TGG | - | chr3.2:83605785-83605804 | None:intergenic | 55.0% | |
| GCGAACTGATCCAACGTGAG+TGG | + | chr3.2:83603864-83603883 | MS.gene052159:intron | 55.0% | |
| GCTTTCACTTGCAGGTCGTG+AGG | + | chr3.2:83603522-83603541 | MS.gene052159:CDS | 55.0% | |
| TCTCTCCGCACAGAAGTGGT+TGG | + | chr3.2:83603474-83603493 | MS.gene052159:CDS | 55.0% | |
| TGAGATTTGTGTCGGGCGTG+TGG | + | chr3.2:83601872-83601891 | MS.gene052159:intron | 55.0% | |
| TGAGGCTCCGCTGTTGAAAG+TGG | + | chr3.2:83601297-83601316 | MS.gene052159:CDS | 55.0% | |
| ! | ACCTTTGCTGCTGTGGACTG+GGG | + | chr3.2:83602438-83602457 | MS.gene052159:CDS | 55.0% |
| ! | TGGTTGGCTGCTGGTGGTAT+GGG | + | chr3.2:83603490-83603509 | MS.gene052159:CDS | 55.0% |
| AACCTCTCCTACGCCGTTGC+AGG | + | chr3.2:83602250-83602269 | MS.gene052159:CDS | 60.0% | |
| ACCCCAGTCCACAGCAGCAA+AGG | - | chr3.2:83602442-83602461 | None:intergenic | 60.0% | |
| ACCTCTCCTACGCCGTTGCA+GGG | + | chr3.2:83602251-83602270 | MS.gene052159:CDS | 60.0% | |
| ATAGAGCCCTGCAACGGCGT+AGG | - | chr3.2:83602260-83602279 | None:intergenic | 60.0% | |
| CTGGGGTAATGCTGCTCTGC+AGG | + | chr3.2:83602455-83602474 | MS.gene052159:CDS | 60.0% | |
| TGGGTCTCTCCGCACAGAAG+TGG | + | chr3.2:83603470-83603489 | MS.gene052159:CDS | 60.0% | |
| TGTCGGGCGTGTGGACTTTG+TGG | + | chr3.2:83601881-83601900 | MS.gene052159:intron | 60.0% | |
| ! | CAGAAGTGGTTGGCTGCTGG+TGG | + | chr3.2:83603484-83603503 | MS.gene052159:CDS | 60.0% |
| ! | GCACAGAAGTGGTTGGCTGC+TGG | + | chr3.2:83603481-83603500 | MS.gene052159:CDS | 60.0% |
| ! | GTGGTTGGCTGCTGGTGGTA+TGG | + | chr3.2:83603489-83603508 | MS.gene052159:CDS | 60.0% |
| ! | GTGTCGGTCTGCCTTGGTAC+CGG | + | chr3.2:83601264-83601283 | MS.gene052159:CDS | 60.0% |
| !! | CCTTTTAGGAGAGGCGGTGG+CGG | + | chr3.2:83601921-83601940 | MS.gene052159:intron | 60.0% |
| !! | GGATGAGGGCGTCCATGTTG+CGG | - | chr3.2:83606019-83606038 | None:intergenic | 60.0% |
| ACACGCTCCAGCCGGTACCA+AGG | - | chr3.2:83601278-83601297 | None:intergenic | 65.0% | |
| CCGCCACCGCCTCTCCTAAA+AGG | - | chr3.2:83601924-83601943 | None:intergenic | 65.0% | |
| ! | TTTAGGAGAGGCGGTGGCGG+TGG | + | chr3.2:83601924-83601943 | MS.gene052159:intron | 65.0% |
| GCCCTGCAACGGCGTAGGAG+AGG | - | chr3.2:83602255-83602274 | None:intergenic | 70.0% | |
| GGAGCCTCACACGCTCCAGC+CGG | - | chr3.2:83601286-83601305 | None:intergenic | 70.0% | |
| !! | CGGTCTGCCTTGGTACCGGC+TGG | + | chr3.2:83601268-83601287 | MS.gene052159:CDS | 70.0% |
| !! | GGTACCGGCTGGAGCGTGTG+AGG | + | chr3.2:83601279-83601298 | MS.gene052159:CDS | 70.0% |
| ! | AGGAGAGGCGGTGGCGGTGG+AGG | + | chr3.2:83601927-83601946 | MS.gene052159:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 83601187 | 83606209 | 83601187 | ID=MS.gene052159 |
| chr3.2 | mRNA | 83601187 | 83606209 | 83601187 | ID=MS.gene052159.t1;Parent=MS.gene052159 |
| chr3.2 | exon | 83601187 | 83601338 | 83601187 | ID=MS.gene052159.t1.exon1;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83601187 | 83601338 | 83601187 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83602164 | 83602290 | 83602164 | ID=MS.gene052159.t1.exon2;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83602164 | 83602290 | 83602164 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83602379 | 83602476 | 83602379 | ID=MS.gene052159.t1.exon3;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83602379 | 83602476 | 83602379 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83602559 | 83602672 | 83602559 | ID=MS.gene052159.t1.exon4;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83602559 | 83602672 | 83602559 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83603082 | 83603142 | 83603082 | ID=MS.gene052159.t1.exon5;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83603082 | 83603142 | 83603082 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83603394 | 83603543 | 83603394 | ID=MS.gene052159.t1.exon6;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83603394 | 83603543 | 83603394 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83603713 | 83603823 | 83603713 | ID=MS.gene052159.t1.exon7;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83603713 | 83603823 | 83603713 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83603947 | 83604114 | 83603947 | ID=MS.gene052159.t1.exon8;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83603947 | 83604114 | 83603947 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83604219 | 83604332 | 83604219 | ID=MS.gene052159.t1.exon9;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83604219 | 83604332 | 83604219 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83605036 | 83605092 | 83605036 | ID=MS.gene052159.t1.exon10;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83605036 | 83605092 | 83605036 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| chr3.2 | exon | 83605727 | 83606209 | 83605727 | ID=MS.gene052159.t1.exon11;Parent=MS.gene052159.t1 |
| chr3.2 | CDS | 83605727 | 83606209 | 83605727 | ID=cds.MS.gene052159.t1;Parent=MS.gene052159.t1 |
| Gene Sequence |
| Protein sequence |
