AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48427

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48427.t1 MTR_3g100480 95.971 1117 43 2 1 1116 1 1116 0.0 2037
MS.gene48427.t1 MTR_3g100480 93.461 1147 43 3 1 1116 1 1146 0.0 2022
MS.gene48427.t1 MTR_5g066000 53.656 1176 357 25 1 1116 1 1048 0.0 1062
MS.gene48427.t1 MTR_5g032380 52.731 531 212 7 495 1003 341 854 1.35e-173 535
MS.gene48427.t1 MTR_5g032380 37.107 159 62 5 19 142 2 157 1.94e-17 88.6
MS.gene48427.t1 MTR_2g071620 44.685 461 225 7 560 993 440 897 2.99e-126 410
MS.gene48427.t1 MTR_1g014680 44.158 505 257 6 539 1025 136 633 1.35e-123 399
MS.gene48427.t1 MTR_4g130940 37.752 347 200 8 585 924 93 430 1.23e-64 235
MS.gene48427.t1 MTR_4g130940 37.752 347 200 8 585 924 93 430 2.24e-64 235
MS.gene48427.t1 MTR_2g070390 38.608 316 184 7 583 892 21 332 1.20e-62 226
MS.gene48427.t1 MTR_6g022290 35.759 316 191 9 576 888 21 327 2.86e-52 194
MS.gene48427.t1 MTR_6g022310 36.246 309 185 9 583 888 126 425 7.57e-51 191
MS.gene48427.t1 MTR_6g022300 35.443 316 192 10 576 888 59 365 3.83e-50 189
MS.gene48427.t1 MTR_5g030360 35.161 310 180 10 585 888 155 449 1.20e-48 186
MS.gene48427.t1 MTR_8g067060 32.727 330 199 8 585 907 204 517 3.16e-48 182
MS.gene48427.t1 MTR_8g471100 32.727 330 199 8 585 907 213 526 3.57e-48 182
MS.gene48427.t1 MTR_5g430360 34.459 296 173 10 599 888 1 281 1.72e-42 164
MS.gene48427.t1 MTR_0279s0020 29.773 309 190 9 585 888 6 292 5.83e-38 146
MS.gene48427.t1 MTR_0279s0020 29.841 315 193 10 591 899 3 295 2.12e-37 143
MS.gene48427.t1 MTR_8g064910 31.646 316 188 11 585 888 55 354 1.21e-36 144
MS.gene48427.t1 MTR_3g087140 30.836 347 187 11 584 886 23 360 2.01e-36 142
MS.gene48427.t1 MTR_1g014260 28.409 352 195 11 585 888 182 524 1.62e-35 145
MS.gene48427.t1 MTR_8g090190 29.462 353 198 10 582 891 21 365 2.06e-34 136
MS.gene48427.t1 MTR_4g115880 26.667 390 193 11 585 888 198 580 2.81e-33 137
MS.gene48427.t1 MTR_4g111860 29.341 334 195 12 585 898 88 400 1.78e-28 120
MS.gene48427.t1 MTR_1g010040 26.116 448 252 17 547 966 69 465 3.50e-22 103
MS.gene48427.t1 MTR_1g010040 26.667 405 231 15 583 966 106 465 4.68e-22 103
MS.gene48427.t1 MTR_2g087710 33.929 168 105 3 741 905 714 878 1.15e-20 99.0
MS.gene48427.t1 MTR_1g041240 27.157 313 181 13 585 877 200 485 1.26e-20 99.0
MS.gene48427.t1 MTR_1g041240 27.157 313 181 13 585 877 201 486 1.29e-20 99.0
MS.gene48427.t1 MTR_1g041240 27.157 313 181 13 585 877 202 487 1.29e-20 99.0
MS.gene48427.t1 MTR_7g106570 34.395 157 96 4 744 896 742 895 4.45e-18 90.5
MS.gene48427.t1 MTR_3g108660 26.384 307 177 12 583 869 106 383 7.03e-18 90.1
MS.gene48427.t1 MTR_3g108660 26.384 307 177 12 583 869 106 383 8.87e-18 89.7
MS.gene48427.t1 MTR_1g077980 34.868 152 92 4 741 888 762 910 1.60e-16 85.5
MS.gene48427.t1 MTR_7g088760 31.677 161 102 5 734 889 744 901 1.28e-15 82.4
MS.gene48427.t1 MTR_7g088760 32.450 151 94 5 744 889 771 918 1.40e-15 82.4
MS.gene48427.t1 MTR_3g083600 35.606 132 64 5 775 888 941 1069 6.20e-14 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48427.t1 AT4G24560 44.306 1045 468 32 22 1029 21 988 0.0 662
MS.gene48427.t1 AT5G65450 63.102 374 127 4 520 892 273 636 7.70e-153 474
MS.gene48427.t1 AT5G65450 42.500 120 63 3 23 138 3 120 2.16e-22 104
MS.gene48427.t1 AT5G65450 63.102 374 127 4 520 892 292 655 3.09e-152 473
MS.gene48427.t1 AT5G65450 41.912 136 69 4 7 138 10 139 4.17e-24 109
MS.gene48427.t1 AT1G17110 45.642 436 207 5 560 993 414 821 7.38e-124 403
MS.gene48427.t1 AT1G17110 53.846 52 21 1 67 115 118 169 1.08e-11 69.7
MS.gene48427.t1 AT1G17110 45.642 436 207 5 560 993 414 821 7.38e-124 403
MS.gene48427.t1 AT1G17110 53.846 52 21 1 67 115 118 169 1.08e-11 69.7
MS.gene48427.t1 AT1G17110 45.602 432 205 5 564 993 422 825 3.44e-123 401
MS.gene48427.t1 AT1G17110 53.846 52 21 1 67 115 118 169 1.06e-11 70.1
MS.gene48427.t1 AT2G24640 47.716 394 195 6 547 939 138 521 7.36e-119 382
MS.gene48427.t1 AT4G31670 46.214 383 203 3 564 943 148 530 3.52e-117 376
MS.gene48427.t1 AT2G24640 48.611 360 175 5 581 939 1 351 7.11e-114 363
MS.gene48427.t1 AT5G57990 37.101 345 201 8 548 888 77 409 1.22e-62 230
MS.gene48427.t1 AT3G14400 37.618 319 187 6 583 892 23 338 1.77e-62 226
MS.gene48427.t1 AT5G46740 33.333 312 193 10 585 888 164 468 1.73e-38 155
MS.gene48427.t1 AT4G39910 29.775 356 197 11 582 891 21 369 2.29e-35 139
MS.gene48427.t1 AT2G22310 29.688 320 189 8 582 872 21 333 7.64e-35 137
MS.gene48427.t1 AT4G17895 29.891 368 227 13 585 933 177 532 4.84e-34 140
MS.gene48427.t1 AT5G46740 37.004 227 131 8 667 888 40 259 3.95e-32 132
MS.gene48427.t1 AT2G22310 27.869 305 184 8 597 872 4 301 1.73e-27 115
MS.gene48427.t1 AT2G22310 29.249 253 147 6 646 872 50 296 1.09e-26 112
MS.gene48427.t1 AT5G10790 25.753 365 198 12 585 888 49 401 2.26e-26 114
MS.gene48427.t1 AT5G10790 25.753 365 198 12 585 888 178 530 1.90e-25 112
MS.gene48427.t1 AT3G49600 27.483 302 183 11 583 871 105 383 9.06e-20 96.3
MS.gene48427.t1 AT3G49600 27.483 302 183 11 583 871 105 383 9.06e-20 96.3
MS.gene48427.t1 AT3G49600 27.483 302 183 11 583 871 105 383 9.33e-20 96.3
MS.gene48427.t1 AT5G22030 34.868 152 92 4 741 888 720 868 6.18e-18 90.1
MS.gene48427.t1 AT5G22030 34.868 152 92 4 741 888 762 910 7.04e-18 90.1
MS.gene48427.t1 AT1G04860 38.281 128 62 4 775 888 832 956 7.11e-18 90.1
MS.gene48427.t1 AT4G10590 34.667 150 91 4 744 889 748 894 1.07e-16 86.3
MS.gene48427.t1 AT4G10590 34.667 150 91 4 744 889 748 894 1.07e-16 86.3
MS.gene48427.t1 AT4G10590 34.667 150 91 4 744 889 748 894 1.07e-16 86.3
MS.gene48427.t1 AT4G10590 34.667 150 91 4 744 889 748 894 1.07e-16 86.3
MS.gene48427.t1 AT4G10570 34.899 149 90 4 744 888 749 894 2.24e-16 85.1
MS.gene48427.t1 AT2G32780 35.606 132 64 4 775 888 954 1082 8.93e-16 83.2
MS.gene48427.t1 AT1G32850 33.333 150 93 4 744 889 734 880 2.01e-15 82.0
MS.gene48427.t1 AT2G40930 31.646 158 100 5 744 896 769 923 1.09e-13 76.3
MS.gene48427.t1 AT2G40930 31.646 158 100 5 744 896 769 923 1.09e-13 76.3

Find 270 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTGTTTCTAATCAATTT+TGG 0.071689 3.1:+79912374 None:intergenic
AAATTGAGCCTTCTGGATTT+TGG 0.137800 3.1:-79916735 MS.gene48427:CDS
ACCACCCTTATCTGCTTATT+TGG 0.165779 3.1:-79915502 MS.gene48427:CDS
TCTCATGTTGCTAGCTATTC+TGG 0.180533 3.1:-79916103 MS.gene48427:CDS
CACTCCGTACAATCTGTAAA+TGG 0.200035 3.1:+79913145 None:intergenic
TGAAACTGTCAGCTTCTTCT+TGG 0.216524 3.1:+79913400 None:intergenic
TGAAGAATATTCAAAATAAA+TGG 0.236585 3.1:-79913067 MS.gene48427:CDS
GGAAGAGGACACTACTTTAA+TGG 0.252937 3.1:-79915016 MS.gene48427:CDS
CAATGCAACTGTAAGAATAT+TGG 0.255783 3.1:+79913370 None:intergenic
ATGCGTGTCACCGGGGATCT+AGG 0.277040 3.1:-79918047 MS.gene48427:CDS
GGAGCCAGGTCAAGTATTTC+TGG 0.278076 3.1:+79913197 None:intergenic
AGCAATACTCCCGGTGGTTC+TGG 0.285574 3.1:-79916421 MS.gene48427:CDS
CCATTCGGTCTTATAAATAT+TGG 0.286412 3.1:-79915823 MS.gene48427:CDS
GCTGGTGAAAAGACTGATTC+TGG 0.300054 3.1:-79916649 MS.gene48427:CDS
AAAGTTGTTGATCAGTTTAG+AGG 0.311825 3.1:-79916046 MS.gene48427:CDS
CTTCTTCTTGGCCTTCTGAT+AGG 0.318080 3.1:+79913412 None:intergenic
AGTTTGCTTGATTCAGTTGA+TGG 0.319779 3.1:-79916865 MS.gene48427:CDS
CCTTGGAGTCTTTCTATTCA+AGG 0.321879 3.1:-79912232 MS.gene48427:CDS
AGCACATTGATAATTGTTAA+TGG 0.329792 3.1:+79917839 None:intergenic
GGGAGTATTGCTCATAATAT+TGG 0.337040 3.1:+79916432 None:intergenic
ACTTTAATGGGTCAAACATT+TGG 0.338468 3.1:-79915003 MS.gene48427:CDS
AATGCAACTGTAAGAATATT+GGG 0.340320 3.1:+79913371 None:intergenic
GTATCGCAGTCTGGAAAATT+CGG 0.341072 3.1:-79913245 MS.gene48427:intron
TTTCTCAACTACAGAGTATT+GGG 0.346305 3.1:-79915245 MS.gene48427:CDS
AGTTGCATTGAAGCGATTTC+AGG 0.347217 3.1:-79913357 MS.gene48427:intron
AATGCAATCTGTATGCCTTA+TGG 0.350845 3.1:-79915067 MS.gene48427:CDS
GATTTGTAATTCGTCGGAAA+TGG 0.358344 3.1:-79917974 MS.gene48427:CDS
AGAAAAGCCGGTATCTTCAT+AGG 0.364664 3.1:+79917176 None:intergenic
AAATCCAGAAAATGAGTTAC+TGG 0.365568 3.1:+79917068 None:intergenic
AGATCTACCTCATCAAATTC+TGG 0.369138 3.1:-79912302 MS.gene48427:CDS
ATATTCTTCCCAACAGAGTT+TGG 0.372541 3.1:+79916538 None:intergenic
TTCTCAGATGATGCTGGTCC+TGG 0.376784 3.1:+79916508 None:intergenic
CATATTTGTCCATATCAGAT+AGG 0.378213 3.1:+79911973 None:intergenic
GAAGAGGACACTACTTTAAT+GGG 0.378755 3.1:-79915015 MS.gene48427:CDS
AGTATTTCTGGAAATTGAAC+AGG 0.382578 3.1:+79913209 None:intergenic
GATCTAACTGTTGAGATAGA+AGG 0.382674 3.1:-79914707 MS.gene48427:CDS
CATCGGAATTACTGCTGAAA+AGG 0.383007 3.1:+79912156 None:intergenic
GATTAATGCATCAGGTTCAT+TGG 0.386928 3.1:-79915037 MS.gene48427:CDS
AGCTTGACAAATGTTTCATA+TGG 0.392055 3.1:+79915874 None:intergenic
TTATCTGCTTATTTGGTTCA+AGG 0.392511 3.1:-79915495 MS.gene48427:CDS
GTCTTATAAATATTGGAAAC+AGG 0.395379 3.1:-79915816 MS.gene48427:intron
GTACGGAGTGGTTGTTCATT+TGG 0.395964 3.1:-79913132 MS.gene48427:CDS
CTGATTGCCAAACCGTTCAT+TGG 0.397532 3.1:-79917350 MS.gene48427:CDS
TCACCGGGGATCTAGGGTTT+AGG 0.398026 3.1:-79918040 MS.gene48427:CDS
AAGATGCTCACGAATTTCTA+AGG 0.399147 3.1:-79915197 MS.gene48427:intron
ACCTGGCTCCTTTCGTGAGT+GGG 0.401172 3.1:-79913184 MS.gene48427:CDS
CCCCAAAATTGATTAGAAAC+AGG 0.404041 3.1:-79912376 MS.gene48427:CDS
GGTGGTTTGTGTGGTGGTTC+CGG 0.405229 3.1:-79918003 MS.gene48427:CDS
AATCAGCAAGCTCGCGTGTC+TGG 0.409041 3.1:+79916203 None:intergenic
CTTCCCTTTGCTCGAGCCTA+AGG 0.410646 3.1:+79916765 None:intergenic
TCCTCCCAATCCTCTAGTAT+TGG 0.411631 3.1:-79916346 MS.gene48427:CDS
CTTTCTCAACTACAGAGTAT+TGG 0.414210 3.1:-79915246 MS.gene48427:CDS
CACCAGCTGATTCATCAGAA+TGG 0.415953 3.1:+79916665 None:intergenic
CTTTGCCAATACTAGAGGAT+TGG 0.419855 3.1:+79916341 None:intergenic
TTTGCCAATACTAGAGGATT+GGG 0.422722 3.1:+79916342 None:intergenic
GTTCAAGTGTGAAGACAGAT+AGG 0.424365 3.1:-79911908 MS.gene48427:CDS
GTTTACAAGCACCGAGACTT+TGG 0.424773 3.1:-79914651 MS.gene48427:CDS
GTAAGATAAATGCGTGTCAC+CGG 0.428306 3.1:-79918056 None:intergenic
TTCAGCAGTAATTCCGATGA+AGG 0.430893 3.1:-79912152 MS.gene48427:CDS
TGATATTGGAAAGAGGGAAT+TGG 0.432266 3.1:-79917262 MS.gene48427:CDS
CAGAGTTCTTATCATTTGAA+TGG 0.432440 3.1:+79911763 None:intergenic
AGTATGCCCGTTGGAGATAG+TGG 0.432973 3.1:+79915267 None:intergenic
TGGTGGGAAGTCCGAGCGTC+AGG 0.433769 3.1:-79914741 MS.gene48427:CDS
CTCATAGCATCTGCAGAACC+TGG 0.434676 3.1:+79916316 None:intergenic
ATCTGTCTTCACACTTGAAC+CGG 0.435398 3.1:+79911911 None:intergenic
GATGGGGTTACAAGTGATAT+TGG 0.440019 3.1:-79917276 MS.gene48427:CDS
ACCAGCTGATTCATCAGAAT+GGG 0.441606 3.1:+79916666 None:intergenic
AGATGAATCACCTGAATTTG+TGG 0.442911 3.1:+79917038 None:intergenic
CAGAGTATTGGGAGTCAGCT+TGG 0.442974 3.1:-79915234 MS.gene48427:CDS
ACAGTCGCCCCTATCTGATA+TGG 0.443547 3.1:-79911982 MS.gene48427:CDS
TTGAACCAAATAAGCAGATA+AGG 0.445737 3.1:+79915497 None:intergenic
TATCGCAGTCTGGAAAATTC+GGG 0.446847 3.1:-79913244 MS.gene48427:intron
AGTGCAAATCTGTTCGATAC+TGG 0.447600 3.1:-79917782 MS.gene48427:intron
TGCTTTCAGATTTCTCCTCA+TGG 0.448738 3.1:+79917220 None:intergenic
ATTCGAAGATTCTTTAGAAT+CGG 0.449038 3.1:+79916573 None:intergenic
AAACATAGGAAGAATGAATA+CGG 0.451334 3.1:-79916136 MS.gene48427:CDS
TCCAAGGTGGGTGAGTCATC+AGG 0.452858 3.1:+79912248 None:intergenic
GGGCGACTGTCTACAATTCA+AGG 0.453460 3.1:+79911995 None:intergenic
GGATCTAGGGTTTAGGAGCC+TGG 0.454466 3.1:-79918033 MS.gene48427:CDS
AAGCAAGTTCCTTCAGCAGC+TGG 0.455434 3.1:-79916010 MS.gene48427:CDS
AAGGTGGAGTTGCGCCCATT+CGG 0.459445 3.1:-79915838 MS.gene48427:CDS
CACAAACCACCACAAGGACC+AGG 0.461741 3.1:+79918015 None:intergenic
GATGCTCTTCCAAACTCTGT+TGG 0.462362 3.1:-79916547 MS.gene48427:CDS
TCTACTATCGGTAGACTTCA+AGG 0.463394 3.1:+79916228 None:intergenic
TAGGCTCGAGCAAAGGGAAG+GGG 0.463530 3.1:-79916762 MS.gene48427:CDS
ATTGGGAGTCAGCTTGGAAA+TGG 0.465606 3.1:-79915228 MS.gene48427:CDS
GAGAGGAAGCTTGCATCAAA+TGG 0.467608 3.1:-79916790 MS.gene48427:CDS
TCTGTATGCCTTATGGAAGC+TGG 0.468299 3.1:-79915060 MS.gene48427:CDS
ATTCGAAAATTAGTTGCCTC+TGG 0.471338 3.1:+79911939 None:intergenic
AAATTAAATCATGTTGCTCC+TGG 0.474076 3.1:-79916826 MS.gene48427:CDS
AAATTGTGTCAGAATGCAAA+TGG 0.477408 3.1:+79911871 None:intergenic
TGTGTGGTGGTTCCGGTGAT+CGG 0.478198 3.1:-79917996 MS.gene48427:CDS
GATGATGCTGGTCCTGGATG+TGG 0.479847 3.1:+79916514 None:intergenic
ATGCTCTTCCAAACTCTGTT+GGG 0.480273 3.1:-79916546 MS.gene48427:CDS
GTGCCTTAGGCTCGAGCAAA+GGG 0.480836 3.1:-79916768 MS.gene48427:CDS
TAAGATAAATGCGTGTCACC+GGG 0.483206 3.1:-79918055 None:intergenic
TCCTGAGGTTTCATTTGGAA+AGG 0.483946 3.1:-79917154 MS.gene48427:CDS
TTAGAGAGAGTCTTGACAAA+AGG 0.484398 3.1:-79912729 MS.gene48427:CDS
TGGGCGCAACTCCACCTTGT+TGG 0.484516 3.1:+79915843 None:intergenic
CTTGACGCCAATGAACGGTT+TGG 0.485006 3.1:+79917343 None:intergenic
TGCGTGTCACCGGGGATCTA+GGG 0.485447 3.1:-79918046 MS.gene48427:CDS
GCAAAACTCATCGGAGCGAT+GGG 0.485645 3.1:-79917293 MS.gene48427:CDS
TCTAGTATTGGCAAAGATCC+AGG 0.486221 3.1:-79916334 MS.gene48427:CDS
CTCTCTTCATTACTAGAACC+AGG 0.486730 3.1:+79916808 None:intergenic
ATCCACCTTGCTATCAATTG+TGG 0.489049 3.1:+79916918 None:intergenic
TGCATCAGGTTCATTGGAAG+AGG 0.491068 3.1:-79915031 MS.gene48427:CDS
TGGTTCTGGATACGATCAAT+TGG 0.493402 3.1:-79916407 MS.gene48427:CDS
AAAACAAGTACCACTGTGTC+AGG 0.493429 3.1:-79914622 MS.gene48427:intron
ATATTTGTCCATATCAGATA+GGG 0.493602 3.1:+79911974 None:intergenic
AGCAAAACTCATCGGAGCGA+TGG 0.497911 3.1:-79917294 MS.gene48427:CDS
TAGCAGCAATAGTAGTAGTA+AGG 0.497989 3.1:-79911817 MS.gene48427:CDS
CCTTGTGGTGGTTTGTGTGG+TGG 0.502679 3.1:-79918009 MS.gene48427:CDS
CATTAATCCCAGCTTCCATA+AGG 0.503883 3.1:+79915052 None:intergenic
TTAGGCTCGAGCAAAGGGAA+GGG 0.504839 3.1:-79916763 MS.gene48427:CDS
CAATATTTATAAGACCGAAT+GGG 0.505487 3.1:+79915824 None:intergenic
TCAAGCAAACTAGCAAACTT+TGG 0.505840 3.1:+79916877 None:intergenic
CGGTGCTTGTAAACCTTCGA+AGG 0.506398 3.1:+79914660 None:intergenic
TGGCTGCTGAGGAAACTGCC+AGG 0.506809 3.1:-79917905 MS.gene48427:CDS
ACTCCGTACAATCTGTAAAT+GGG 0.507881 3.1:+79913146 None:intergenic
TATTCAAAATAAATGGTTCA+AGG 0.509589 3.1:-79913060 MS.gene48427:CDS
AAATCTCCACTATCTCCAAC+GGG 0.510825 3.1:-79915273 MS.gene48427:CDS
TCCTTTCCAAATGAAACCTC+AGG 0.511078 3.1:+79917153 None:intergenic
ACACCCATTTACAGATTGTA+CGG 0.511194 3.1:-79913149 MS.gene48427:CDS
TTAGCGCAGCGCGCAGTGGC+AGG 0.513371 3.1:+79917804 None:intergenic
TACAAGTGATATTGGAAAGA+GGG 0.513972 3.1:-79917268 MS.gene48427:CDS
ATCGGAATTACTGCTGAAAA+GGG 0.514230 3.1:+79912157 None:intergenic
ACAAGCACCGAGACTTTGGA+TGG 0.514723 3.1:-79914647 MS.gene48427:CDS
ATCTAACTGTTGAGATAGAA+GGG 0.514901 3.1:-79914706 MS.gene48427:CDS
GACCTGGCTCCTTTCGTGAG+TGG 0.515663 3.1:-79913185 MS.gene48427:CDS
CATCATCCTTTCCTGACGCT+CGG 0.517139 3.1:+79914730 None:intergenic
TTAATGGGTCAAACATTTGG+AGG 0.519473 3.1:-79915000 MS.gene48427:CDS
CTTGCATCAAATGGTGCCTT+AGG 0.522567 3.1:-79916781 MS.gene48427:CDS
AGGAGATACTGAACTACTGA+TGG 0.523615 3.1:+79912268 None:intergenic
GTAAATGGGTGTCTTATCAC+TGG 0.523618 3.1:+79913160 None:intergenic
CCAATATTTATAAGACCGAA+TGG 0.523988 3.1:+79915823 None:intergenic
CTGTATGCCTTATGGAAGCT+GGG 0.526923 3.1:-79915059 MS.gene48427:CDS
CGAGCGTCAGGAAAGGATGA+TGG 0.527052 3.1:-79914729 MS.gene48427:CDS
CTTAGGCTCGAGCAAAGGGA+AGG 0.527235 3.1:-79916764 MS.gene48427:CDS
GGGAAGAATATGCCACATCC+AGG 0.530645 3.1:-79916526 MS.gene48427:CDS
AGAGAGACGTTGTATTCCTC+CGG 0.532420 3.1:-79917876 MS.gene48427:CDS
TAGGAGCCTGGTCCTTGTGG+TGG 0.535363 3.1:-79918021 MS.gene48427:CDS
TGAACCAAATAAGCAGATAA+GGG 0.535381 3.1:+79915498 None:intergenic
TCCCACTCACGAAAGGAGCC+AGG 0.535900 3.1:+79913183 None:intergenic
ATCAATTGGAATCTAAAGAC+AGG 0.536833 3.1:-79916393 MS.gene48427:CDS
GTTTAGGAGCCTGGTCCTTG+TGG 0.538011 3.1:-79918024 MS.gene48427:CDS
GGCTGCTGAGGAAACTGCCA+GGG 0.538351 3.1:-79917904 MS.gene48427:CDS
GAAGCTGGGATTAATGCATC+AGG 0.542737 3.1:-79915045 MS.gene48427:CDS
CTTTGCCGTTGATGAATGAG+AGG 0.544227 3.1:+79916458 None:intergenic
TTGTATCGTGTAGAAAATCA+AGG 0.544969 3.1:-79911740 MS.gene48427:CDS
TCCCATTCTGATGAATCAGC+TGG 0.545033 3.1:-79916667 MS.gene48427:CDS
ATGTCACTCCCAGCTGCTGA+AGG 0.545313 3.1:+79916001 None:intergenic
CAAACCGTTCATTGGCGTCA+AGG 0.548762 3.1:-79917342 MS.gene48427:CDS
ATCCATGCTAGTTGAATCAC+GGG 0.550084 3.1:+79912109 None:intergenic
TTACAAGTGATATTGGAAAG+AGG 0.550269 3.1:-79917269 MS.gene48427:CDS
AGCAAGTTCCTTCAGCAGCT+GGG 0.550345 3.1:-79916009 MS.gene48427:CDS
ATTTCCAGAAATACTTGACC+TGG 0.554355 3.1:-79913201 MS.gene48427:CDS
GGTCCTTGTGGTGGTTTGTG+TGG 0.556498 3.1:-79918012 MS.gene48427:CDS
AAAATACCCTATGAAGATAC+CGG 0.556626 3.1:-79917183 MS.gene48427:CDS
GGTGCCTTAGGCTCGAGCAA+AGG 0.557657 3.1:-79916769 MS.gene48427:CDS
ATAAGGGTGGTGTAAAAGCT+AGG 0.557843 3.1:+79915514 None:intergenic
TCCTGATGACTCACCCACCT+TGG 0.558898 3.1:-79912249 MS.gene48427:CDS
AATTGTGTCAGAATGCAAAT+GGG 0.560569 3.1:+79911872 None:intergenic
ATAAAATTACCTTCGATCGA+AGG 0.560761 3.1:+79914974 None:intergenic
GCAGCTGGGAGTGACATCGC+TGG 0.564732 3.1:-79915995 MS.gene48427:CDS
TGGAGGATACCTTCGATCGA+AGG 0.566501 3.1:-79914983 MS.gene48427:intron
GAAGAAGCTGACAGTTTCAG+AGG 0.568693 3.1:-79913396 MS.gene48427:CDS
TAGAAAATCAAGGAAAAGAA+CGG 0.568736 3.1:-79911730 MS.gene48427:CDS
GAATGTAATTCATTCTTCAA+AGG 0.568814 3.1:-79916488 MS.gene48427:CDS
CACTTGCGGAGGCCCTTCGA+AGG 0.569322 3.1:-79914673 MS.gene48427:CDS
TTGATCGTATCCAGAACCAC+CGG 0.571432 3.1:+79916411 None:intergenic
TGAAACCTCAGGAGAAAAGC+CGG 0.571592 3.1:+79917164 None:intergenic
TTGGTGATTCAGGGCGCGGA+TGG 0.572787 3.1:-79912067 MS.gene48427:CDS
CATCCATGCTAGTTGAATCA+CGG 0.574164 3.1:+79912108 None:intergenic
TAATTCATTCTTCAAAGGCA+AGG 0.574736 3.1:-79916483 MS.gene48427:CDS
TACCCGTGATTCAACTAGCA+TGG 0.575201 3.1:-79912111 MS.gene48427:CDS
TGATCGGATTTGTAATTCGT+CGG 0.575580 3.1:-79917980 MS.gene48427:CDS
GTGGCATCAAATCATGTTGT+GGG 0.575839 3.1:-79916265 MS.gene48427:CDS
GAAAAGCCGGTATCTTCATA+GGG 0.576719 3.1:+79917177 None:intergenic
AAAAGCTAGGCACTGAAGTA+CGG 0.579933 3.1:+79915527 None:intergenic
TAAAACCACAATTGATAGCA+AGG 0.581874 3.1:-79916923 MS.gene48427:CDS
TGGATCTTTGCCAATACTAG+AGG 0.583767 3.1:+79916336 None:intergenic
CCACCACACAAACCACCACA+AGG 0.585054 3.1:+79918009 None:intergenic
AACATAGGAAGAATGAATAC+GGG 0.587009 3.1:-79916135 MS.gene48427:CDS
GTTGTATTCCTCCGGTGCGG+TGG 0.587415 3.1:-79917868 MS.gene48427:CDS
ATTACATTCTCAGATGATGC+TGG 0.588788 3.1:+79916502 None:intergenic
CTGCTAAATTATCCTCTGCA+AGG 0.589005 3.1:+79917109 None:intergenic
CGCTGGAAAATACAATGACA+AGG 0.590161 3.1:-79915978 MS.gene48427:intron
TGTCTTCACACTTGAACCGG+TGG 0.590395 3.1:+79911914 None:intergenic
TATTCTGGAAATTCTAAGAG+TGG 0.590740 3.1:-79916088 MS.gene48427:CDS
GCGTGTCTGGCATCTACTAT+CGG 0.593769 3.1:+79916216 None:intergenic
TAGACTTCAAGGTGCAGCCA+TGG 0.593984 3.1:+79916239 None:intergenic
TCATGCTCGGTTCCTTGCAG+AGG 0.594898 3.1:-79917121 MS.gene48427:CDS
ATGACCTTGACGCCAATGAA+CGG 0.595313 3.1:+79917338 None:intergenic
AGGCTCGAGCAAAGGGAAGG+GGG 0.595891 3.1:-79916761 MS.gene48427:CDS
AGTACTGCAAGAACCTTCAT+CGG 0.596328 3.1:+79912139 None:intergenic
GATAAAGCTCTTGATTCGAG+AGG 0.596799 3.1:-79916712 MS.gene48427:CDS
AAGATGTAAATCCTATCAGA+AGG 0.597617 3.1:-79913423 MS.gene48427:CDS
GGCGACTGTCTACAATTCAA+GGG 0.598426 3.1:+79911996 None:intergenic
GGAAGTCCGAGCGTCAGGAA+AGG 0.598756 3.1:-79914736 MS.gene48427:CDS
AAAATCTCCACTATCTCCAA+CGG 0.599351 3.1:-79915274 MS.gene48427:CDS
ATAAAGCTCTTGATTCGAGA+GGG 0.600594 3.1:-79916711 MS.gene48427:CDS
GCTCCTAAACCCTAGATCCC+CGG 0.600883 3.1:+79918037 None:intergenic
CTAGAAATGAAGAGATCAAG+AGG 0.601259 3.1:-79917938 MS.gene48427:CDS
GCCAATACTAGAGGATTGGG+AGG 0.601286 3.1:+79916345 None:intergenic
TGTGGCATCAAATCATGTTG+TGG 0.604968 3.1:-79916266 MS.gene48427:CDS
GGAAATATCAACACTTGCGG+AGG 0.607847 3.1:-79914684 MS.gene48427:CDS
CACATCCCGGTACAAAACAT+AGG 0.610843 3.1:-79916150 MS.gene48427:CDS
GGCGGAAACCACCGCACCGG+AGG 0.611070 3.1:+79917860 None:intergenic
AATCATGTTGTGGGCAACCA+TGG 0.611294 3.1:-79916256 MS.gene48427:CDS
GTCTTCACACTTGAACCGGT+GGG 0.615708 3.1:+79911915 None:intergenic
TACCTCATCAAATTCTGGTG+CGG 0.616458 3.1:-79912297 MS.gene48427:CDS
GTCCTCCAAGCAAAACTCAT+CGG 0.616567 3.1:-79917302 MS.gene48427:CDS
GCTGACTCATTTCTGAAACT+AGG 0.616989 3.1:-79911792 MS.gene48427:CDS
TCGTCGGAAATGGCAGATTG+CGG 0.618924 3.1:-79917964 MS.gene48427:CDS
GGAGATACTGAACTACTGAT+GGG 0.620176 3.1:+79912269 None:intergenic
ACAATTCAAGGGAGATGAGG+AGG 0.620553 3.1:+79912007 None:intergenic
CGAATTACAAATCCGATCAC+CGG 0.620968 3.1:+79917984 None:intergenic
GCTGATTCATCAGAATGGGA+TGG 0.622609 3.1:+79916670 None:intergenic
TCACTGGTCCCACTCACGAA+AGG 0.625305 3.1:+79913176 None:intergenic
AATGGCGGAAACCACCGCAC+CGG 0.627431 3.1:+79917857 None:intergenic
TTCAAGTGTGAAGACAGATA+GGG 0.630941 3.1:-79911907 MS.gene48427:CDS
ATGAACGGTTTGGCAATCAG+TGG 0.633937 3.1:+79917353 None:intergenic
TCTACAATTCAAGGGAGATG+AGG 0.638031 3.1:+79912004 None:intergenic
TCGGTGTCTTGTATATGCAA+AGG 0.638069 3.1:+79916592 None:intergenic
AATGAGCATGACAGATCAGA+GGG 0.639492 3.1:-79916982 MS.gene48427:CDS
AATATTATGAGCAATACTCC+CGG 0.645015 3.1:-79916430 MS.gene48427:CDS
ATAAAATGCATGAAATGTGG+TGG 0.645045 3.1:-79914758 MS.gene48427:CDS
CTGGTTCTAGTAATGAAGAG+AGG 0.645269 3.1:-79916807 MS.gene48427:CDS
TATTTGTCCATATCAGATAG+GGG 0.645772 3.1:+79911975 None:intergenic
AAATGAGCATGACAGATCAG+AGG 0.646786 3.1:-79916983 MS.gene48427:CDS
AGGAACCTCTCATTCATCAA+CGG 0.648012 3.1:-79916463 MS.gene48427:CDS
TGATCGTATCCAGAACCACC+GGG 0.648413 3.1:+79916412 None:intergenic
GAATAGAAAGACTCCAAGGT+GGG 0.649202 3.1:+79912236 None:intergenic
AGTTGAGAAAGTATGCCCGT+TGG 0.650024 3.1:+79915258 None:intergenic
TCGGAAATGGCAGATTGCGG+TGG 0.650180 3.1:-79917961 MS.gene48427:CDS
AGGGGAAATATCAACACTTG+CGG 0.651108 3.1:-79914687 MS.gene48427:CDS
GTGTCTTGTATATGCAAAGG+AGG 0.652115 3.1:+79916595 None:intergenic
ATATGATTCAGTTTCTCCAG+AGG 0.652489 3.1:-79911955 MS.gene48427:CDS
AGGATGATAATATTCATGCT+CGG 0.653120 3.1:-79917134 MS.gene48427:CDS
TAAAATGCATGAAATGTGGT+GGG 0.653195 3.1:-79914757 MS.gene48427:CDS
GAATTGGAGCATGATTACTC+TGG 0.653214 3.1:-79917246 MS.gene48427:CDS
CCTTGAATAGAAAGACTCCA+AGG 0.653481 3.1:+79912232 None:intergenic
GGTGCTTGTAAACCTTCGAA+GGG 0.655612 3.1:+79914661 None:intergenic
GCTTTATCCCAAAATCCAGA+AGG 0.658280 3.1:+79916727 None:intergenic
GCACTTAGCGCAGCGCGCAG+TGG 0.661534 3.1:+79917800 None:intergenic
CAACGTCTCTCTCTCAACCC+TGG 0.661731 3.1:+79917887 None:intergenic
AGCCGCACCAGAATTTGATG+AGG 0.664879 3.1:+79912295 None:intergenic
ACATTGATAATTGTTAATGG+CGG 0.666398 3.1:+79917842 None:intergenic
TTGTATATGCAAAGGAGGTG+TGG 0.666440 3.1:+79916600 None:intergenic
GGCGCGGATGGAGTAGCACG+TGG 0.667009 3.1:-79912055 MS.gene48427:CDS
CATTTACAGATTGTACGGAG+TGG 0.667297 3.1:-79913144 MS.gene48427:CDS
ACTGAAGTGATTTCACATCC+CGG 0.667560 3.1:-79916163 MS.gene48427:CDS
GAGGAGAAATCTGAAAGCAG+AGG 0.671864 3.1:-79917216 MS.gene48427:CDS
TCTAACTGTTGAGATAGAAG+GGG 0.674085 3.1:-79914705 MS.gene48427:CDS
CAGATAAAATGCATGAAATG+TGG 0.678663 3.1:-79914761 MS.gene48427:CDS
CAAGCTGTATAACTCCAACA+AGG 0.679148 3.1:-79915857 MS.gene48427:CDS
ACCAAATAAGCAGATAAGGG+TGG 0.680652 3.1:+79915501 None:intergenic
GCTGTATAACTCCAACAAGG+TGG 0.688581 3.1:-79915854 MS.gene48427:CDS
GACGTTGTATTCCTCCGGTG+CGG 0.690831 3.1:-79917871 MS.gene48427:CDS
TTTCAGGTACAAATAAAACA+TGG 0.693039 3.1:-79915344 MS.gene48427:intron
CTTGCAATCATCTAGCTCTG+TGG 0.693583 3.1:-79916284 MS.gene48427:CDS
GCGGATGGAGTAGCACGTGG+AGG 0.697656 3.1:-79912052 MS.gene48427:CDS
GTTCAAGGTTGACGACAGTG+TGG 0.706958 3.1:-79913045 MS.gene48427:intron
CAAAACTCATCGGAGCGATG+GGG 0.708206 3.1:-79917292 MS.gene48427:CDS
TGATTACTCTGGTAACCATG+AGG 0.720197 3.1:-79917235 MS.gene48427:CDS
TGAATAGAAAGACTCCAAGG+TGG 0.723006 3.1:+79912235 None:intergenic
AACCACAATTGATAGCAAGG+TGG 0.726238 3.1:-79916920 MS.gene48427:CDS
ATTATGAGCAATACTCCCGG+TGG 0.731468 3.1:-79916427 MS.gene48427:CDS
AAGATAAATGCGTGTCACCG+GGG 0.735629 3.1:-79918054 None:intergenic
CATCAACCAACCTGACACAG+TGG 0.737047 3.1:+79914612 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATAACAAATGAAAAAA+CGG - chr3.1:79917200-79917219 MS.gene48427:CDS 10.0%
!! ATTTATCATTTAATATATCA+GGG + chr3.1:79914111-79914130 None:intergenic 10.0%
!! AAATTAATACTAAACATGTT+GGG - chr3.1:79913986-79914005 MS.gene48427:intron 15.0%
!! AATAAAAATTTATTAGGTGT+GGG - chr3.1:79916876-79916895 MS.gene48427:CDS 15.0%
!! ATAAAATGTTATAACTCATT+TGG - chr3.1:79914988-79915007 MS.gene48427:CDS 15.0%
!! CAGATTTCTTAAATTAAATA+TGG - chr3.1:79915231-79915250 MS.gene48427:CDS 15.0%
!! CATTTATCATTTAATATATC+AGG + chr3.1:79914112-79914131 None:intergenic 15.0%
!! CTGATATATTAAATGATAAA+TGG - chr3.1:79914110-79914129 MS.gene48427:intron 15.0%
!! GAAATAGTTGATTAATAATT+TGG + chr3.1:79916323-79916342 None:intergenic 15.0%
!! TATTAAATGATAAATGGAAA+TGG - chr3.1:79914116-79914135 MS.gene48427:intron 15.0%
!! TGAAGAATATTCAAAATAAA+TGG - chr3.1:79916705-79916724 MS.gene48427:CDS 15.0%
!!! GACTTTTTTTTTTCAATTTA+TGG + chr3.1:79915315-79915334 None:intergenic 15.0%
!!! TAATTTTCTTATTCTTTGTT+AGG - chr3.1:79912126-79912145 MS.gene48427:CDS 15.0%
!! AAGTAAAAATAAAGGTAATC+AGG - chr3.1:79915643-79915662 MS.gene48427:intron 20.0%
!! AATTAATACTAAACATGTTG+GGG - chr3.1:79913987-79914006 MS.gene48427:intron 20.0%
!! AGTAAAAATAAAGGTAATCA+GGG - chr3.1:79915644-79915663 MS.gene48427:intron 20.0%
!! ATACTTGTTTGTGTATTTAT+AGG - chr3.1:79914022-79914041 MS.gene48427:intron 20.0%
!! ATTTCATCCTTATAAATATG+CGG - chr3.1:79915517-79915536 MS.gene48427:CDS 20.0%
!! CCAAAAATATAATAGTTCAT+AGG - chr3.1:79917247-79917266 MS.gene48427:CDS 20.0%
!! GAAATTAATACTAAACATGT+TGG - chr3.1:79913985-79914004 MS.gene48427:intron 20.0%
!! GAATAAAAATTTATTAGGTG+TGG - chr3.1:79916875-79916894 MS.gene48427:CDS 20.0%
!! TAAAACATGTTTCATTATGA+GGG - chr3.1:79915912-79915931 MS.gene48427:intron 20.0%
!! TAAGATTGAAAACATTAAAG+AGG + chr3.1:79915195-79915214 None:intergenic 20.0%
!! TAAGTGACAATATAATGTAA+AGG + chr3.1:79917329-79917348 None:intergenic 20.0%
!! TATTCAAAATAAATGGTTCA+AGG - chr3.1:79916712-79916731 MS.gene48427:CDS 20.0%
!! TGAATCACCAAAAATATAAT+CGG + chr3.1:79917696-79917715 None:intergenic 20.0%
!! TTAAAACATGTTTCATTATG+AGG - chr3.1:79915911-79915930 MS.gene48427:intron 20.0%
!! TTTCAATCTTAACATATGAT+TGG - chr3.1:79915204-79915223 MS.gene48427:CDS 20.0%
!!! AATGCAGTTACAATAAATTT+TGG + chr3.1:79916847-79916866 None:intergenic 20.0%
!!! ATTATATTTTTGGTGATTCA+GGG - chr3.1:79917696-79917715 MS.gene48427:intron 20.0%
!!! CCTATGAACTATTATATTTT+TGG + chr3.1:79917250-79917269 None:intergenic 20.0%
!!! GGTAATTTTATATTTCTATC+TGG - chr3.1:79914810-79914829 MS.gene48427:intron 20.0%
!!! TACATTATATTGTCACTTAT+CGG - chr3.1:79917330-79917349 MS.gene48427:CDS 20.0%
!!! TATGTTGATTAGAAATAACA+AGG - chr3.1:79914953-79914972 MS.gene48427:intron 20.0%
!!! TCAAGTTTTTTATTTTCTTC+TGG - chr3.1:79914139-79914158 MS.gene48427:intron 20.0%
!!! TGTTAATTATGATGATTTTG+TGG - chr3.1:79912151-79912170 MS.gene48427:CDS 20.0%
! AAAAAATAACTTACACGAAC+TGG + chr3.1:79914087-79914106 None:intergenic 25.0%
! AAACATAGGAAGAATGAATA+CGG - chr3.1:79913636-79913655 MS.gene48427:intron 25.0%
! AATGCAACTGTAAGAATATT+GGG + chr3.1:79916404-79916423 None:intergenic 25.0%
! ATATCTCTTCTGTAAATTTC+AGG - chr3.1:79914412-79914431 MS.gene48427:intron 25.0%
! ATATTTGTCCATATCAGATA+GGG + chr3.1:79917801-79917820 None:intergenic 25.0%
! ATTAATACTAAACATGTTGG+GGG - chr3.1:79913988-79914007 MS.gene48427:intron 25.0%
! ATTCAACATAGTCTGTAAAA+GGG + chr3.1:79912260-79912279 None:intergenic 25.0%
! ATTGTGATGTTCTGTATTAA+TGG - chr3.1:79912290-79912309 MS.gene48427:CDS 25.0%
! CAATATTTATAAGACCGAAT+GGG + chr3.1:79913951-79913970 None:intergenic 25.0%
! CTAAATCATGTATGTGTAAT+GGG - chr3.1:79914308-79914327 MS.gene48427:intron 25.0%
! CTAGAATTTACCTAGAATAA+AGG - chr3.1:79915472-79915491 MS.gene48427:intron 25.0%
! GAATGTAATTCATTCTTCAA+AGG - chr3.1:79913284-79913303 MS.gene48427:intron 25.0%
! GATTGAAGATGTTTATGATT+AGG - chr3.1:79912176-79912195 MS.gene48427:CDS 25.0%
! GGTAGACTAAGTAAAAATAA+AGG - chr3.1:79915635-79915654 MS.gene48427:intron 25.0%
! GTCTTATAAATATTGGAAAC+AGG - chr3.1:79913956-79913975 MS.gene48427:intron 25.0%
! TACATACAAGAAATAAACCA+AGG + chr3.1:79916998-79917017 None:intergenic 25.0%
! TAGAAAATCAAGGAAAAGAA+CGG - chr3.1:79918042-79918061 MS.gene48427:CDS 25.0%
! TATTCTAGGTAAATTCTAGA+CGG + chr3.1:79915471-79915490 None:intergenic 25.0%
! TCTAAATCATGTATGTGTAA+TGG - chr3.1:79914307-79914326 MS.gene48427:intron 25.0%
! TGCAAACAAATAGAAACAAA+GGG + chr3.1:79916758-79916777 None:intergenic 25.0%
! TTAGTGATGTTTAGTTAAAC+TGG - chr3.1:79915943-79915962 MS.gene48427:intron 25.0%
! TTGCAAACAAATAGAAACAA+AGG + chr3.1:79916759-79916778 None:intergenic 25.0%
! TTGTGATGTTCTGTATTAAT+GGG - chr3.1:79912291-79912310 MS.gene48427:CDS 25.0%
!! AATTTTACAGCATAGAAAGT+TGG - chr3.1:79917919-79917938 MS.gene48427:CDS 25.0%
!! ACATTGATAATTGTTAATGG+CGG + chr3.1:79911933-79911952 None:intergenic 25.0%
!! AGCACATTGATAATTGTTAA+TGG + chr3.1:79911936-79911955 None:intergenic 25.0%
!! ATAAACCAAGAAGTACATTT+GGG + chr3.1:79916807-79916826 None:intergenic 25.0%
!! CTCATTTTAAACTAATCACA+TGG - chr3.1:79914651-79914670 MS.gene48427:CDS 25.0%
!! TAACTCATTTTCTGGATTTT+CGG - chr3.1:79912708-79912727 MS.gene48427:CDS 25.0%
!! TGTTATGAATGCTTCTTTTT+CGG - chr3.1:79916664-79916683 MS.gene48427:CDS 25.0%
!! TTTCAGGTACAAATAAAACA+TGG - chr3.1:79914428-79914447 MS.gene48427:intron 25.0%
!!! AACCTGTTTCTAATCAATTT+TGG + chr3.1:79917401-79917420 None:intergenic 25.0%
!!! ACCTGTTTCTAATCAATTTT+GGG + chr3.1:79917400-79917419 None:intergenic 25.0%
!!! ATTCGAAGATTCTTTAGAAT+CGG + chr3.1:79913202-79913221 None:intergenic 25.0%
!!! CATATATGCTTTTTTATGCT+AGG - chr3.1:79917068-79917087 MS.gene48427:CDS 25.0%
!!! GATTATATTTTTGGTGATTC+AGG - chr3.1:79917695-79917714 MS.gene48427:intron 25.0%
!!! GTTGCTTGTTATTTTGATTT+TGG - chr3.1:79916247-79916266 MS.gene48427:CDS 25.0%
AAAATACCCTATGAAGATAC+CGG - chr3.1:79912589-79912608 MS.gene48427:intron 30.0%
AAAGTTGTTGATCAGTTTAG+AGG - chr3.1:79913726-79913745 MS.gene48427:intron 30.0%
AAATCCAGAAAATGAGTTAC+TGG + chr3.1:79912707-79912726 None:intergenic 30.0%
AAATTAAATCATGTTGCTCC+TGG - chr3.1:79912946-79912965 MS.gene48427:intron 30.0%
AAATTGTGTCAGAATGCAAA+TGG + chr3.1:79917904-79917923 None:intergenic 30.0%
AACATAGGAAGAATGAATAC+GGG - chr3.1:79913637-79913656 MS.gene48427:intron 30.0%
AACTGGTTGTTGAAACTTAA+TGG - chr3.1:79915960-79915979 MS.gene48427:intron 30.0%
AACTTATAACTGTTTCCCTT+TGG - chr3.1:79914386-79914405 MS.gene48427:intron 30.0%
AAGATGTAAATCCTATCAGA+AGG - chr3.1:79916349-79916368 MS.gene48427:CDS 30.0%
AAGATGTTTATGATTAGGAG+AGG - chr3.1:79912181-79912200 MS.gene48427:CDS 30.0%
AATATTATGAGCAATACTCC+CGG - chr3.1:79913342-79913361 MS.gene48427:intron 30.0%
AATTGTGTCAGAATGCAAAT+GGG + chr3.1:79917903-79917922 None:intergenic 30.0%
ACAGAAGAGATATTTACCAA+AGG + chr3.1:79914405-79914424 None:intergenic 30.0%
ACCTAAAGGAATTCTTTCAA+AGG + chr3.1:79916920-79916939 None:intergenic 30.0%
ACTGCACAAAATCATCATAA+TGG + chr3.1:79912107-79912126 None:intergenic 30.0%
AGATGTTTATGATTAGGAGA+GGG - chr3.1:79912182-79912201 MS.gene48427:CDS 30.0%
AGCTTGACAAATGTTTCATA+TGG + chr3.1:79913901-79913920 None:intergenic 30.0%
AGGATGATAATATTCATGCT+CGG - chr3.1:79912638-79912657 MS.gene48427:intron 30.0%
ATAAAATGCATGAAATGTGG+TGG - chr3.1:79915014-79915033 MS.gene48427:CDS 30.0%
ATAAAATTACCTTCGATCGA+AGG + chr3.1:79914801-79914820 None:intergenic 30.0%
ATAATAGTTCATAGGCTAAC+TGG - chr3.1:79917255-79917274 MS.gene48427:CDS 30.0%
ATCAATTGGAATCTAAAGAC+AGG - chr3.1:79913379-79913398 MS.gene48427:CDS 30.0%
ATCCCAAGATTCAAAAAGTA+AGG - chr3.1:79917424-79917443 MS.gene48427:intron 30.0%
ATCTAACTGTTGAGATAGAA+GGG - chr3.1:79915066-79915085 MS.gene48427:CDS 30.0%
CAATAGTTTGATGTATTGTG+CGG + chr3.1:79914623-79914642 None:intergenic 30.0%
CAATGCAACTGTAAGAATAT+TGG + chr3.1:79916405-79916424 None:intergenic 30.0%
CAGAAGAGATATTTACCAAA+GGG + chr3.1:79914404-79914423 None:intergenic 30.0%
CAGAGTTCTTATCATTTGAA+TGG + chr3.1:79918012-79918031 None:intergenic 30.0%
CAGATAAAATGCATGAAATG+TGG - chr3.1:79915011-79915030 MS.gene48427:CDS 30.0%
CATATTTGTCCATATCAGAT+AGG + chr3.1:79917802-79917821 None:intergenic 30.0%
CATGCCACACAAAAAAAAAT+AGG + chr3.1:79912065-79912084 None:intergenic 30.0%
CATTCAACATAGTCTGTAAA+AGG + chr3.1:79912261-79912280 None:intergenic 30.0%
CCAATAGTATTCAAGAAACA+TGG + chr3.1:79914362-79914381 None:intergenic 30.0%
CCAATATTTATAAGACCGAA+TGG + chr3.1:79913952-79913971 None:intergenic 30.0%
CCATGTTTCTTGAATACTAT+TGG - chr3.1:79914359-79914378 MS.gene48427:intron 30.0%
CGATACAAATGTAACAAATG+AGG + chr3.1:79916513-79916532 None:intergenic 30.0%
GAATTTACTAGTTCATTCTC+TGG + chr3.1:79915673-79915692 None:intergenic 30.0%
GATTCAAAAAGTAAGGTCAA+TGG - chr3.1:79917431-79917450 MS.gene48427:intron 30.0%
GTAGTAACCGCATATTTATA+AGG + chr3.1:79915527-79915546 None:intergenic 30.0%
GTTTGATCACATTGAATTGT+TGG - chr3.1:79915710-79915729 MS.gene48427:intron 30.0%
TAAAATGCATGAAATGTGGT+GGG - chr3.1:79915015-79915034 MS.gene48427:CDS 30.0%
TAATTCATTCTTCAAAGGCA+AGG - chr3.1:79913289-79913308 MS.gene48427:intron 30.0%
TACAAGTGATATTGGAAAGA+GGG - chr3.1:79912504-79912523 MS.gene48427:intron 30.0%
TATTTGTCCATATCAGATAG+GGG + chr3.1:79917800-79917819 None:intergenic 30.0%
TGAACCAAATAAGCAGATAA+GGG + chr3.1:79914277-79914296 None:intergenic 30.0%
TGATTAGAAATAACAAGGAG+AGG - chr3.1:79914958-79914977 MS.gene48427:intron 30.0%
TGGATAAAAGAAGAAACAGT+TGG + chr3.1:79915377-79915396 None:intergenic 30.0%
TTAAGAAAAACGATCCATAC+AGG + chr3.1:79915895-79915914 None:intergenic 30.0%
TTACAAGTGATATTGGAAAG+AGG - chr3.1:79912503-79912522 MS.gene48427:intron 30.0%
TTGAACCAAATAAGCAGATA+AGG + chr3.1:79914278-79914297 None:intergenic 30.0%
TTGTATCGTGTAGAAAATCA+AGG - chr3.1:79918032-79918051 MS.gene48427:CDS 30.0%
! ACCTTTGAAAGAATTCCTTT+AGG - chr3.1:79916916-79916935 MS.gene48427:CDS 30.0%
! ACTTTAATGGGTCAAACATT+TGG - chr3.1:79914769-79914788 MS.gene48427:intron 30.0%
! ATTCTTCCTATGTTTTGTAC+CGG + chr3.1:79913631-79913650 None:intergenic 30.0%
! CATAAACCAAGAAGTACATT+TGG + chr3.1:79916808-79916827 None:intergenic 30.0%
! CCATCTGAAAAAGATTTTAG+AGG - chr3.1:79917568-79917587 MS.gene48427:intron 30.0%
! CCATTCGGTCTTATAAATAT+TGG - chr3.1:79913949-79913968 MS.gene48427:intron 30.0%
! GACTTCTCCGATTATATTTT+TGG - chr3.1:79917686-79917705 MS.gene48427:intron 30.0%
! GTTATGAATGCTTCTTTTTC+GGG - chr3.1:79916665-79916684 MS.gene48427:CDS 30.0%
! TAAAACCACAATTGATAGCA+AGG - chr3.1:79912849-79912868 MS.gene48427:intron 30.0%
! TATTCTGGAAATTCTAAGAG+TGG - chr3.1:79913684-79913703 MS.gene48427:intron 30.0%
! TGTGCTATATTTTGCCATTA+GGG - chr3.1:79913836-79913855 MS.gene48427:intron 30.0%
! TTATCTGCTTATTTGGTTCA+AGG - chr3.1:79914277-79914296 MS.gene48427:intron 30.0%
! TTGTGCTATATTTTGCCATT+AGG - chr3.1:79913835-79913854 MS.gene48427:intron 30.0%
! TTTCTCAACTACAGAGTATT+GGG - chr3.1:79914527-79914546 MS.gene48427:intron 30.0%
! TTTTCCAGTAACTCATTTTC+TGG - chr3.1:79912700-79912719 MS.gene48427:intron 30.0%
!! AGTATTTCTGGAAATTGAAC+AGG + chr3.1:79916566-79916585 None:intergenic 30.0%
!! ATAGTTTTGCGTCTAAGTTT+TGG - chr3.1:79912218-79912237 MS.gene48427:CDS 30.0%
!! ATGTTCTGTATTAATGGGTT+GGG - chr3.1:79912296-79912315 MS.gene48427:CDS 30.0%
!!! AAGATTGATTTTGAAGTCGA+AGG - chr3.1:79914471-79914490 MS.gene48427:intron 30.0%
!!! CCTCTAAAATCTTTTTCAGA+TGG + chr3.1:79917571-79917590 None:intergenic 30.0%
!!! CCTGTTTCTAATCAATTTTG+GGG + chr3.1:79917399-79917418 None:intergenic 30.0%
!!! CTATTTTTTTTTGTGTGGCA+TGG - chr3.1:79912063-79912082 MS.gene48427:CDS 30.0%
!!! CTTTTTTGTGTTCATGTTGA+GGG - chr3.1:79917102-79917121 MS.gene48427:CDS 30.0%
!!! GACCTTACTTTTTGAATCTT+GGG + chr3.1:79917429-79917448 None:intergenic 30.0%
!!! GCTATCAATTGTGGTTTTAT+CGG + chr3.1:79912848-79912867 None:intergenic 30.0%
!!! TCGACCTATTTTTTTTTGTG+TGG - chr3.1:79912058-79912077 MS.gene48427:CDS 30.0%
!!! TGACCTTACTTTTTGAATCT+TGG + chr3.1:79917430-79917449 None:intergenic 30.0%
AAAATCTCCACTATCTCCAA+CGG - chr3.1:79914498-79914517 MS.gene48427:intron 35.0%
AAATAACAAGGAGAGGATGA+TGG - chr3.1:79914965-79914984 MS.gene48427:intron 35.0%
AAGATGCTCACGAATTTCTA+AGG - chr3.1:79914575-79914594 MS.gene48427:intron 35.0%
AATGCAATCTGTATGCCTTA+TGG - chr3.1:79914705-79914724 MS.gene48427:CDS 35.0%
ACACCCATTTACAGATTGTA+CGG - chr3.1:79916623-79916642 MS.gene48427:CDS 35.0%
ACATTGAATTGTTGGTGTAG+AGG - chr3.1:79915718-79915737 MS.gene48427:intron 35.0%
ACATTGTATTGCACTATGAC+TGG + chr3.1:79914877-79914896 None:intergenic 35.0%
ACGTTAATGCTTTCGTTTCA+TGG - chr3.1:79915557-79915576 MS.gene48427:intron 35.0%
ACTCCGTACAATCTGTAAAT+GGG + chr3.1:79916629-79916648 None:intergenic 35.0%
AGATCTACCTCATCAAATTC+TGG - chr3.1:79917470-79917489 MS.gene48427:intron 35.0%
AGATGAATCACCTGAATTTG+TGG + chr3.1:79912737-79912756 None:intergenic 35.0%
ATATGATTCAGTTTCTCCAG+AGG - chr3.1:79917817-79917836 MS.gene48427:CDS 35.0%
ATATTCTTCCCAACAGAGTT+TGG + chr3.1:79913237-79913256 None:intergenic 35.0%
ATCGGAATTACTGCTGAAAA+GGG + chr3.1:79917618-79917637 None:intergenic 35.0%
ATGAGAATGTGTGAATAGGT+TGG + chr3.1:79915354-79915373 None:intergenic 35.0%
ATTACATTCTCAGATGATGC+TGG + chr3.1:79913273-79913292 None:intergenic 35.0%
ATTCGAAAATTAGTTGCCTC+TGG + chr3.1:79917836-79917855 None:intergenic 35.0%
ATTGTATTGCACTATGACTG+GGG + chr3.1:79914875-79914894 None:intergenic 35.0%
ATTGTGTGGAAGAAGGAAAA+GGG + chr3.1:79915434-79915453 None:intergenic 35.0%
ATTTCCAGAAATACTTGACC+TGG - chr3.1:79916571-79916590 MS.gene48427:CDS 35.0%
CATTGTATTGCACTATGACT+GGG + chr3.1:79914876-79914895 None:intergenic 35.0%
CCCCAAAATTGATTAGAAAC+AGG - chr3.1:79917396-79917415 MS.gene48427:intron 35.0%
CTAGAAATGAAGAGATCAAG+AGG - chr3.1:79911834-79911853 MS.gene48427:CDS 35.0%
CTCTGGTGTGTGTAATTATT+TGG - chr3.1:79916215-79916234 MS.gene48427:CDS 35.0%
CTTTCTCAACTACAGAGTAT+TGG - chr3.1:79914526-79914545 MS.gene48427:intron 35.0%
GAAAGAATTCCTTTAGGTGT+GGG - chr3.1:79916922-79916941 MS.gene48427:CDS 35.0%
GAAGAGGACACTACTTTAAT+GGG - chr3.1:79914757-79914776 MS.gene48427:CDS 35.0%
GACTATGTTGAATGATTGAG+AGG - chr3.1:79912267-79912286 MS.gene48427:CDS 35.0%
GAGGAAAAAGAATATAGAGG+CGG + chr3.1:79913411-79913430 None:intergenic 35.0%
GATACTAATGTTGTTGTCCT+TGG - chr3.1:79916978-79916997 MS.gene48427:CDS 35.0%
GATCTAACTGTTGAGATAGA+AGG - chr3.1:79915065-79915084 MS.gene48427:CDS 35.0%
GATTAATGCATCAGGTTCAT+TGG - chr3.1:79914735-79914754 MS.gene48427:CDS 35.0%
GATTTGTAATTCGTCGGAAA+TGG - chr3.1:79911798-79911817 MS.gene48427:CDS 35.0%
GCAATGTAATCAAACCTCTA+CGG + chr3.1:79915818-79915837 None:intergenic 35.0%
GTCATAGTGCAATACAATGT+TGG - chr3.1:79914877-79914896 MS.gene48427:intron 35.0%
TAAATTCTAGACGGAATGGT+GGG + chr3.1:79915462-79915481 None:intergenic 35.0%
TAGAGGTTTGATTACATTGC+AGG - chr3.1:79915818-79915837 MS.gene48427:CDS 35.0%
TAGCAGCAATAGTAGTAGTA+AGG - chr3.1:79917955-79917974 MS.gene48427:CDS 35.0%
TAGGTAAATTCTAGACGGAA+TGG + chr3.1:79915466-79915485 None:intergenic 35.0%
TCAAGCAAACTAGCAAACTT+TGG + chr3.1:79912898-79912917 None:intergenic 35.0%
TCTAACTGTTGAGATAGAAG+GGG - chr3.1:79915067-79915086 MS.gene48427:CDS 35.0%
TGAAAGAATTCCTTTAGGTG+TGG - chr3.1:79916921-79916940 MS.gene48427:CDS 35.0%
TGAGGAAATGTTCATGACTA+GGG - chr3.1:79915778-79915797 MS.gene48427:intron 35.0%
TGATATTGGAAAGAGGGAAT+TGG - chr3.1:79912510-79912529 MS.gene48427:intron 35.0%
TGATCGGATTTGTAATTCGT+CGG - chr3.1:79911792-79911811 MS.gene48427:CDS 35.0%
TGGGAGGAAAAAGAATATAG+AGG + chr3.1:79913414-79913433 None:intergenic 35.0%
TTAAGCAGCTCAATCATCAA+TGG + chr3.1:79916129-79916148 None:intergenic 35.0%
TTACACTTACAATTGCTGCA+GGG - chr3.1:79913868-79913887 MS.gene48427:intron 35.0%
TTAGAGAGAGTCTTGACAAA+AGG - chr3.1:79917043-79917062 MS.gene48427:CDS 35.0%
TTCAAGTGTGAAGACAGATA+GGG - chr3.1:79917865-79917884 MS.gene48427:CDS 35.0%
TTCTTGTATGTATGTCTTGC+AGG - chr3.1:79917006-79917025 MS.gene48427:CDS 35.0%
TTGGATGAGAATGTGTGAAT+AGG + chr3.1:79915358-79915377 None:intergenic 35.0%
TTTATCCATTTCTGAGCTGT+AGG - chr3.1:79915389-79915408 MS.gene48427:intron 35.0%
TTTGCCAATACTAGAGGATT+GGG + chr3.1:79913433-79913452 None:intergenic 35.0%
! AAATTGAGCCTTCTGGATTT+TGG - chr3.1:79913037-79913056 MS.gene48427:intron 35.0%
! AATTGAGCCTTCTGGATTTT+GGG - chr3.1:79913038-79913057 MS.gene48427:intron 35.0%
! ACTAATTTTCGAATTCCCAC+CGG - chr3.1:79917842-79917861 MS.gene48427:CDS 35.0%
! AGTTTGCTTGATTCAGTTGA+TGG - chr3.1:79912907-79912926 MS.gene48427:intron 35.0%
! ATAAAGCTCTTGATTCGAGA+GGG - chr3.1:79913061-79913080 MS.gene48427:CDS 35.0%
! GATCAGCTGAATCATTTTGT+AGG - chr3.1:79917360-79917379 MS.gene48427:intron 35.0%
! GATGTTCTGTATTAATGGGT+TGG - chr3.1:79912295-79912314 MS.gene48427:CDS 35.0%
! TCTTGAGAGCAGAATTCTTT+TGG - chr3.1:79916779-79916798 MS.gene48427:CDS 35.0%
! TGTGTGTAATTATTTGGCTC+TGG - chr3.1:79916221-79916240 MS.gene48427:CDS 35.0%
! TTAATGGGTCAAACATTTGG+AGG - chr3.1:79914772-79914791 MS.gene48427:intron 35.0%
! TTCTTCCTATGTTTTGTACC+GGG + chr3.1:79913630-79913649 None:intergenic 35.0%
! TTTTCTCCTGAGGTTTCATT+TGG - chr3.1:79912613-79912632 MS.gene48427:intron 35.0%
! TTTTTCTCTTTCCAAGTCAC+CGG - chr3.1:79916001-79916020 MS.gene48427:CDS 35.0%
!! ACCAGTTTTTGAAAGATTGG+CGG - chr3.1:79917285-79917304 MS.gene48427:CDS 35.0%
!! AGCACCAGTTTTTGAAAGAT+TGG - chr3.1:79917282-79917301 MS.gene48427:CDS 35.0%
!! GGGAGTATTGCTCATAATAT+TGG + chr3.1:79913343-79913362 None:intergenic 35.0%
!!! AGTTTTGGAGATGAGTTTTG+TGG - chr3.1:79912233-79912252 MS.gene48427:CDS 35.0%
!!! CAATTGTGGTTTTATCGGTA+AGG + chr3.1:79912843-79912862 None:intergenic 35.0%
!!! CGAAAGCATTAACGTGTTTT+TGG + chr3.1:79915552-79915571 None:intergenic 35.0%
!!! GATCAAGAGGCTTTTGATTT+TGG - chr3.1:79911847-79911866 MS.gene48427:CDS 35.0%
!!! GCTTTTTTGTGTTCATGTTG+AGG - chr3.1:79917101-79917120 MS.gene48427:CDS 35.0%
!!! GGCATAGTTCTACTTTTTGT+AGG + chr3.1:79916100-79916119 None:intergenic 35.0%
!!! GGCATGGATTCTGTTTTTTT+CGG - chr3.1:79912079-79912098 MS.gene48427:CDS 35.0%
!!! GGTGACTGATTGGTTTTTTA+GGG - chr3.1:79915614-79915633 MS.gene48427:intron 35.0%
AAAACAAGTACCACTGTGTC+AGG - chr3.1:79915150-79915169 MS.gene48427:intron 40.0%
AAATCTCCACTATCTCCAAC+GGG - chr3.1:79914499-79914518 MS.gene48427:intron 40.0%
AAATGAGCATGACAGATCAG+AGG - chr3.1:79912789-79912808 MS.gene48427:intron 40.0%
AACCTCTACGGTGTACATTT+AGG + chr3.1:79915806-79915825 None:intergenic 40.0%
AACTAATCACATGGCATACG+TGG - chr3.1:79914660-79914679 MS.gene48427:CDS 40.0%
AATGAGCATGACAGATCAGA+GGG - chr3.1:79912790-79912809 MS.gene48427:intron 40.0%
AATGGGTGTTTCTTCTCTCA+TGG - chr3.1:79914325-79914344 MS.gene48427:intron 40.0%
ACCAAATAAGCAGATAAGGG+TGG + chr3.1:79914274-79914293 None:intergenic 40.0%
ACCACCCTTATCTGCTTATT+TGG - chr3.1:79914270-79914289 MS.gene48427:intron 40.0%
ACTGAAGTGATTTCACATCC+CGG - chr3.1:79913609-79913628 MS.gene48427:intron 40.0%
AGAAAAGCCGGTATCTTCAT+AGG + chr3.1:79912599-79912618 None:intergenic 40.0%
AGCTGAGTTATGGCTCAATT+AGG - chr3.1:79917169-79917188 MS.gene48427:CDS 40.0%
AGGAACCTCTCATTCATCAA+CGG - chr3.1:79913309-79913328 MS.gene48427:intron 40.0%
AGGAGATACTGAACTACTGA+TGG + chr3.1:79917507-79917526 None:intergenic 40.0%
AGGGGAAATATCAACACTTG+CGG - chr3.1:79915085-79915104 MS.gene48427:CDS 40.0%
AGTACTGCAAGAACCTTCAT+CGG + chr3.1:79917636-79917655 None:intergenic 40.0%
AGTGCAAATCTGTTCGATAC+TGG - chr3.1:79911990-79912009 MS.gene48427:CDS 40.0%
AGTTGCATTGAAGCGATTTC+AGG - chr3.1:79916415-79916434 MS.gene48427:CDS 40.0%
ATAAGGGTGGTGTAAAAGCT+AGG + chr3.1:79914261-79914280 None:intergenic 40.0%
ATCCATACAGGCTCAACAAA+GGG + chr3.1:79915883-79915902 None:intergenic 40.0%
ATCCATGCTAGTTGAATCAC+GGG + chr3.1:79917666-79917685 None:intergenic 40.0%
ATCTGTCTTCACACTTGAAC+CGG + chr3.1:79917864-79917883 None:intergenic 40.0%
ATGAGATTGGATTGAACCTG+AGG - chr3.1:79915760-79915779 MS.gene48427:intron 40.0%
ATGCTCTTCCAAACTCTGTT+GGG - chr3.1:79913226-79913245 MS.gene48427:CDS 40.0%
CAAGCTGTATAACTCCAACA+AGG - chr3.1:79913915-79913934 MS.gene48427:intron 40.0%
CACTCCGTACAATCTGTAAA+TGG + chr3.1:79916630-79916649 None:intergenic 40.0%
CACTGACAGACCTTTATTCT+AGG + chr3.1:79915485-79915504 None:intergenic 40.0%
CAGATCACGTAAATCTACCT+TGG + chr3.1:79915270-79915289 None:intergenic 40.0%
CATCATTTGATGCTTCTGTG+AGG + chr3.1:79916058-79916077 None:intergenic 40.0%
CATCCATGCTAGTTGAATCA+CGG + chr3.1:79917667-79917686 None:intergenic 40.0%
CATCGGAATTACTGCTGAAA+AGG + chr3.1:79917619-79917638 None:intergenic 40.0%
CATTAATCCCAGCTTCCATA+AGG + chr3.1:79914723-79914742 None:intergenic 40.0%
CATTACCTACAGCTCAGAAA+TGG + chr3.1:79915397-79915416 None:intergenic 40.0%
CATTGTGTGGAAGAAGGAAA+AGG + chr3.1:79915435-79915454 None:intergenic 40.0%
CATTTACAGATTGTACGGAG+TGG - chr3.1:79916628-79916647 MS.gene48427:CDS 40.0%
CCTTGAATAGAAAGACTCCA+AGG + chr3.1:79917543-79917562 None:intergenic 40.0%
CCTTGGAGTCTTTCTATTCA+AGG - chr3.1:79917540-79917559 MS.gene48427:intron 40.0%
CGAATTACAAATCCGATCAC+CGG + chr3.1:79911791-79911810 None:intergenic 40.0%
CGCTGGAAAATACAATGACA+AGG - chr3.1:79913794-79913813 MS.gene48427:intron 40.0%
CTAGTCATGAACATTTCCTC+AGG + chr3.1:79915779-79915798 None:intergenic 40.0%
CTCTCTTCATTACTAGAACC+AGG + chr3.1:79912967-79912986 None:intergenic 40.0%
CTGAGGAAATGTTCATGACT+AGG - chr3.1:79915777-79915796 MS.gene48427:intron 40.0%
CTGCAGCAATTGTAAGTGTA+AGG + chr3.1:79913869-79913888 None:intergenic 40.0%
CTGCTAAATTATCCTCTGCA+AGG + chr3.1:79912666-79912685 None:intergenic 40.0%
CTTACACTTACAATTGCTGC+AGG - chr3.1:79913867-79913886 MS.gene48427:intron 40.0%
CTTTGCCAATACTAGAGGAT+TGG + chr3.1:79913434-79913453 None:intergenic 40.0%
GAAAAGCCGGTATCTTCATA+GGG + chr3.1:79912598-79912617 None:intergenic 40.0%
GAATAGAAAGACTCCAAGGT+GGG + chr3.1:79917539-79917558 None:intergenic 40.0%
GAATTGGAGCATGATTACTC+TGG - chr3.1:79912526-79912545 MS.gene48427:intron 40.0%
GATGGGGTTACAAGTGATAT+TGG - chr3.1:79912496-79912515 MS.gene48427:intron 40.0%
GCTTTATCCCAAAATCCAGA+AGG + chr3.1:79913048-79913067 None:intergenic 40.0%
GGAAGAGGACACTACTTTAA+TGG - chr3.1:79914756-79914775 MS.gene48427:CDS 40.0%
GGAGATACTGAACTACTGAT+GGG + chr3.1:79917506-79917525 None:intergenic 40.0%
GTAAATGGGTGTCTTATCAC+TGG + chr3.1:79916615-79916634 None:intergenic 40.0%
GTAAATTCTAGACGGAATGG+TGG + chr3.1:79915463-79915482 None:intergenic 40.0%
GTATCGCAGTCTGGAAAATT+CGG - chr3.1:79916527-79916546 MS.gene48427:CDS 40.0%
GTATCTCCATAGGAAGAGTT+GGG - chr3.1:79915593-79915612 MS.gene48427:intron 40.0%
GTGGCATCAAATCATGTTGT+GGG - chr3.1:79913507-79913526 MS.gene48427:intron 40.0%
GTGTCTTGTATATGCAAAGG+AGG + chr3.1:79913180-79913199 None:intergenic 40.0%
GTTACATTTGTATCGCAGTC+TGG - chr3.1:79916518-79916537 MS.gene48427:CDS 40.0%
GTTCAAGTGTGAAGACAGAT+AGG - chr3.1:79917864-79917883 MS.gene48427:CDS 40.0%
GTTTCATGGCTGTGAATGAA+CGG - chr3.1:79915571-79915590 MS.gene48427:intron 40.0%
TACCTCATCAAATTCTGGTG+CGG - chr3.1:79917475-79917494 MS.gene48427:intron 40.0%
TATCGCAGTCTGGAAAATTC+GGG - chr3.1:79916528-79916547 MS.gene48427:CDS 40.0%
TCCTGAGGTTTCATTTGGAA+AGG - chr3.1:79912618-79912637 MS.gene48427:intron 40.0%
TCCTTTCCAAATGAAACCTC+AGG + chr3.1:79912622-79912641 None:intergenic 40.0%
TCTACAATTCAAGGGAGATG+AGG + chr3.1:79917771-79917790 None:intergenic 40.0%
TCTACTATCGGTAGACTTCA+AGG + chr3.1:79913547-79913566 None:intergenic 40.0%
TCTCATGTTGCTAGCTATTC+TGG - chr3.1:79913669-79913688 MS.gene48427:intron 40.0%
TGAAACTGTCAGCTTCTTCT+TGG + chr3.1:79916375-79916394 None:intergenic 40.0%
TGAATAGAAAGACTCCAAGG+TGG + chr3.1:79917540-79917559 None:intergenic 40.0%
TGAATGAACGGTATCTCCAT+AGG - chr3.1:79915583-79915602 MS.gene48427:intron 40.0%
TGATTACTCTGGTAACCATG+AGG - chr3.1:79912537-79912556 MS.gene48427:intron 40.0%
TGCTTTCAGATTTCTCCTCA+TGG + chr3.1:79912555-79912574 None:intergenic 40.0%
TGGATCTTTGCCAATACTAG+AGG + chr3.1:79913439-79913458 None:intergenic 40.0%
TGGTTCCCAAATGTACTTCT+TGG - chr3.1:79916799-79916818 MS.gene48427:CDS 40.0%
TGTGGCATCAAATCATGTTG+TGG - chr3.1:79913506-79913525 MS.gene48427:intron 40.0%
TTCAGCAGTAATTCCGATGA+AGG - chr3.1:79917620-79917639 MS.gene48427:intron 40.0%
TTCCTAAATGTACACCGTAG+AGG - chr3.1:79915801-79915820 MS.gene48427:intron 40.0%
TTGTATATGCAAAGGAGGTG+TGG + chr3.1:79913175-79913194 None:intergenic 40.0%
TTGTTGGTGTAGAGGATAAG+TGG - chr3.1:79915726-79915745 MS.gene48427:intron 40.0%
! AACCACAATTGATAGCAAGG+TGG - chr3.1:79912852-79912871 MS.gene48427:intron 40.0%
! ACCAGCTGATTCATCAGAAT+GGG + chr3.1:79913109-79913128 None:intergenic 40.0%
! ATAGGTTGGAATACTCTGAG+CGG + chr3.1:79915340-79915359 None:intergenic 40.0%
! ATCCACCTTGCTATCAATTG+TGG + chr3.1:79912857-79912876 None:intergenic 40.0%
! ATGGAGACTAGTTAGTTCCA+AGG - chr3.1:79915250-79915269 MS.gene48427:CDS 40.0%
! ATTTTGTAGGTGCTCTCCAA+GGG - chr3.1:79917373-79917392 MS.gene48427:intron 40.0%
! CTTTCAAAGGTGCAACTAAC+AGG + chr3.1:79916907-79916926 None:intergenic 40.0%
! CTTTTCCTTCTTCCACACAA+TGG - chr3.1:79915433-79915452 MS.gene48427:intron 40.0%
! GATAAAGCTCTTGATTCGAG+AGG - chr3.1:79913060-79913079 MS.gene48427:CDS 40.0%
! GTCATTCACAGTGATTAGTC+TGG - chr3.1:79916944-79916963 MS.gene48427:CDS 40.0%
! GTTTTCTCCATCCAAAGTCT+CGG + chr3.1:79915135-79915154 None:intergenic 40.0%
! TCGGTGTCTTGTATATGCAA+AGG + chr3.1:79913183-79913202 None:intergenic 40.0%
! TTTTCGGCTTCCACAAATTC+AGG - chr3.1:79912724-79912743 MS.gene48427:CDS 40.0%
! TTTTGTGTTCATGTTGAGGG+TGG - chr3.1:79917105-79917124 MS.gene48427:CDS 40.0%
!! AAAAGCTAGGCACTGAAGTA+CGG + chr3.1:79914248-79914267 None:intergenic 40.0%
!! AGAGGATAAGTGGATTTTGC+TGG - chr3.1:79915736-79915755 MS.gene48427:intron 40.0%
!! CCAGTTTTTGAAAGATTGGC+GGG - chr3.1:79917286-79917305 MS.gene48427:CDS 40.0%
!! CTGGTTCTAGTAATGAAGAG+AGG - chr3.1:79912965-79912984 MS.gene48427:intron 40.0%
!! GCTGACTCATTTCTGAAACT+AGG - chr3.1:79917980-79917999 MS.gene48427:CDS 40.0%
!! GGTTTTATCGGTAAGGTCAA+GGG + chr3.1:79912836-79912855 None:intergenic 40.0%
!! TCTAGTATTGGCAAAGATCC+AGG - chr3.1:79913438-79913457 MS.gene48427:intron 40.0%
!! TGGTTCTGGATACGATCAAT+TGG - chr3.1:79913365-79913384 MS.gene48427:CDS 40.0%
!! TGTCAGGTTGGTTGATGTTT+GGG - chr3.1:79915166-79915185 MS.gene48427:intron 40.0%
!!! GGGTGACTGATTGGTTTTTT+AGG - chr3.1:79915613-79915632 MS.gene48427:intron 40.0%
!!! TGGTTTTATCGGTAAGGTCA+AGG + chr3.1:79912837-79912856 None:intergenic 40.0%
AAGGAAAAGGGAGAGACAAG+GGG + chr3.1:79915422-79915441 None:intergenic 45.0%
AATCATGTTGTGGGCAACCA+TGG - chr3.1:79913516-79913535 MS.gene48427:intron 45.0%
ACAATTCAAGGGAGATGAGG+AGG + chr3.1:79917768-79917787 None:intergenic 45.0%
AGAAGGAAAAGGGAGAGACA+AGG + chr3.1:79915424-79915443 None:intergenic 45.0%
AGAGAGACGTTGTATTCCTC+CGG - chr3.1:79911896-79911915 MS.gene48427:CDS 45.0%
AGCCATAACTCAGCTCTTGA+CGG + chr3.1:79917164-79917183 None:intergenic 45.0%
ATGACCTTGACGCCAATGAA+CGG + chr3.1:79912437-79912456 None:intergenic 45.0%
ATTATGAGCAATACTCCCGG+TGG - chr3.1:79913345-79913364 MS.gene48427:intron 45.0%
ATTGGGAGTCAGCTTGGAAA+TGG - chr3.1:79914544-79914563 MS.gene48427:intron 45.0%
CACATCCCGGTACAAAACAT+AGG - chr3.1:79913622-79913641 MS.gene48427:intron 45.0%
CCCGCCAATCTTTCAAAAAC+TGG + chr3.1:79917289-79917308 None:intergenic 45.0%
CTCAATCATCAATGGCAGCA+AGG + chr3.1:79916121-79916140 None:intergenic 45.0%
CTGATTGCCAAACCGTTCAT+TGG - chr3.1:79912422-79912441 MS.gene48427:intron 45.0%
CTGTATGCCTTATGGAAGCT+GGG - chr3.1:79914713-79914732 MS.gene48427:CDS 45.0%
CTTGCATCAAATGGTGCCTT+AGG - chr3.1:79912991-79913010 MS.gene48427:intron 45.0%
GAAGAAGCTGACAGTTTCAG+AGG - chr3.1:79916376-79916395 MS.gene48427:CDS 45.0%
GAAGCTGGGATTAATGCATC+AGG - chr3.1:79914727-79914746 MS.gene48427:CDS 45.0%
GAAGGAAAAGGGAGAGACAA+GGG + chr3.1:79915423-79915442 None:intergenic 45.0%
GAGAGGAAGCTTGCATCAAA+TGG - chr3.1:79912982-79913001 MS.gene48427:intron 45.0%
GAGGAGAAATCTGAAAGCAG+AGG - chr3.1:79912556-79912575 MS.gene48427:intron 45.0%
GATCCATACAGGCTCAACAA+AGG + chr3.1:79915884-79915903 None:intergenic 45.0%
GATGCTCTTCCAAACTCTGT+TGG - chr3.1:79913225-79913244 MS.gene48427:CDS 45.0%
GCTGTATAACTCCAACAAGG+TGG - chr3.1:79913918-79913937 MS.gene48427:intron 45.0%
GGAAATATCAACACTTGCGG+AGG - chr3.1:79915088-79915107 MS.gene48427:intron 45.0%
GGCGACTGTCTACAATTCAA+GGG + chr3.1:79917779-79917798 None:intergenic 45.0%
GGTATCTCCATAGGAAGAGT+TGG - chr3.1:79915592-79915611 MS.gene48427:intron 45.0%
GGTGCTTGTAAACCTTCGAA+GGG + chr3.1:79915114-79915133 None:intergenic 45.0%
GTACGGAGTGGTTGTTCATT+TGG - chr3.1:79916640-79916659 MS.gene48427:CDS 45.0%
GTCCTCCAAGCAAAACTCAT+CGG - chr3.1:79912470-79912489 MS.gene48427:intron 45.0%
TACCCGTGATTCAACTAGCA+TGG - chr3.1:79917661-79917680 MS.gene48427:intron 45.0%
TCCCATTCTGATGAATCAGC+TGG - chr3.1:79913105-79913124 MS.gene48427:CDS 45.0%
TCCTCCCAATCCTCTAGTAT+TGG - chr3.1:79913426-79913445 MS.gene48427:intron 45.0%
TCTGTATGCCTTATGGAAGC+TGG - chr3.1:79914712-79914731 MS.gene48427:CDS 45.0%
TGAAACCTCAGGAGAAAAGC+CGG + chr3.1:79912611-79912630 None:intergenic 45.0%
TGCATCAGGTTCATTGGAAG+AGG - chr3.1:79914741-79914760 MS.gene48427:CDS 45.0%
TGTAAGGCAACAGTCCCTAA+TGG + chr3.1:79913853-79913872 None:intergenic 45.0%
TGTGAATGACCCACACCTAA+AGG + chr3.1:79916934-79916953 None:intergenic 45.0%
TTGATCGTATCCAGAACCAC+CGG + chr3.1:79913364-79913383 None:intergenic 45.0%
! AGTTGAGAAAGTATGCCCGT+TGG + chr3.1:79914517-79914536 None:intergenic 45.0%
! ATGAACGGTTTGGCAATCAG+TGG + chr3.1:79912422-79912441 None:intergenic 45.0%
! CACCAGCTGATTCATCAGAA+TGG + chr3.1:79913110-79913129 None:intergenic 45.0%
! CATTTTGTAGGTGCTCTCCA+AGG - chr3.1:79917372-79917391 MS.gene48427:intron 45.0%
! CTTCTTCTTGGCCTTCTGAT+AGG + chr3.1:79916363-79916382 None:intergenic 45.0%
! CTTTGCCGTTGATGAATGAG+AGG + chr3.1:79913317-79913336 None:intergenic 45.0%
! GCTGATTCATCAGAATGGGA+TGG + chr3.1:79913105-79913124 None:intergenic 45.0%
! GCTGGTGAAAAGACTGATTC+TGG - chr3.1:79913123-79913142 MS.gene48427:CDS 45.0%
! GGATTTTGCTGGCATGAGAT+TGG - chr3.1:79915747-79915766 MS.gene48427:intron 45.0%
! GTCTGTCAGTGTCTTGCTAT+AGG - chr3.1:79915494-79915513 MS.gene48427:CDS 45.0%
!! CTTGCAATCATCTAGCTCTG+TGG - chr3.1:79913488-79913507 MS.gene48427:intron 45.0%
!! GTGTCAGGTTGGTTGATGTT+TGG - chr3.1:79915165-79915184 MS.gene48427:intron 45.0%
!! GTTTACAAGCACCGAGACTT+TGG - chr3.1:79915121-79915140 MS.gene48427:intron 45.0%
!! GTTTTTGAAAGATTGGCGGG+TGG - chr3.1:79917289-79917308 MS.gene48427:CDS 45.0%
!!! ATTTTTGGTGATTCAGGGCG+CGG - chr3.1:79917701-79917720 MS.gene48427:intron 45.0%
!!! CTAATCAATTTTGGGGCCCT+TGG + chr3.1:79917392-79917411 None:intergenic 45.0%
!!! GCTTTTGATTTTGGCTGCTG+AGG - chr3.1:79911856-79911875 MS.gene48427:CDS 45.0%
!! AATATGAATAAAAATTTATT+AGG - chr3.1:79916870-79916889 MS.gene48427:CDS 5.0%
AAGCAAGTTCCTTCAGCAGC+TGG - chr3.1:79913762-79913781 MS.gene48427:intron 50.0%
AATCACATGGCATACGTGGC+TGG - chr3.1:79914664-79914683 MS.gene48427:CDS 50.0%
ACAGTCGCCCCTATCTGATA+TGG - chr3.1:79917790-79917809 MS.gene48427:CDS 50.0%
ACCCGTCAAGAGCTGAGTTA+TGG - chr3.1:79917159-79917178 MS.gene48427:CDS 50.0%
AGCAAAACTCATCGGAGCGA+TGG - chr3.1:79912478-79912497 MS.gene48427:intron 50.0%
AGCAAGTTCCTTCAGCAGCT+GGG - chr3.1:79913763-79913782 MS.gene48427:intron 50.0%
AGCCGCACCAGAATTTGATG+AGG + chr3.1:79917480-79917499 None:intergenic 50.0%
AGTATGCCCGTTGGAGATAG+TGG + chr3.1:79914508-79914527 None:intergenic 50.0%
ATAACTCAGCTCTTGACGGG+TGG + chr3.1:79917160-79917179 None:intergenic 50.0%
ATACAGGCTCAACAAAGGGC+GGG + chr3.1:79915879-79915898 None:intergenic 50.0%
CAAAACTCATCGGAGCGATG+GGG - chr3.1:79912480-79912499 MS.gene48427:intron 50.0%
CAAACCGTTCATTGGCGTCA+AGG - chr3.1:79912430-79912449 MS.gene48427:intron 50.0%
CAAGTACCACTGTGTCAGGT+TGG - chr3.1:79915154-79915173 MS.gene48427:intron 50.0%
CAGTCACCCAACTCTTCCTA+TGG + chr3.1:79915602-79915621 None:intergenic 50.0%
CATACAGGCTCAACAAAGGG+CGG + chr3.1:79915880-79915899 None:intergenic 50.0%
CATCAACCAACCTGACACAG+TGG + chr3.1:79915163-79915182 None:intergenic 50.0%
CATCATCCTTTCCTGACGCT+CGG + chr3.1:79915045-79915064 None:intergenic 50.0%
CGGTGCTTGTAAACCTTCGA+AGG + chr3.1:79915115-79915134 None:intergenic 50.0%
CTCATAGCATCTGCAGAACC+TGG + chr3.1:79913459-79913478 None:intergenic 50.0%
CTTGACGCCAATGAACGGTT+TGG + chr3.1:79912432-79912451 None:intergenic 50.0%
GCAAAACTCATCGGAGCGAT+GGG - chr3.1:79912479-79912498 MS.gene48427:intron 50.0%
GCCAATACTAGAGGATTGGG+AGG + chr3.1:79913430-79913449 None:intergenic 50.0%
GCCATAACTCAGCTCTTGAC+GGG + chr3.1:79917163-79917182 None:intergenic 50.0%
GCGTGTCTGGCATCTACTAT+CGG + chr3.1:79913559-79913578 None:intergenic 50.0%
GGAAGAGTTGGGTGACTGAT+TGG - chr3.1:79915604-79915623 MS.gene48427:intron 50.0%
GGAGCCAGGTCAAGTATTTC+TGG + chr3.1:79916578-79916597 None:intergenic 50.0%
GGGAAGAATATGCCACATCC+AGG - chr3.1:79913246-79913265 MS.gene48427:intron 50.0%
GGGCGACTGTCTACAATTCA+AGG + chr3.1:79917780-79917799 None:intergenic 50.0%
GGGGCAAAAATTGAGCCTTC+TGG - chr3.1:79913030-79913049 MS.gene48427:intron 50.0%
GTCTTCACACTTGAACCGGT+GGG + chr3.1:79917860-79917879 None:intergenic 50.0%
GTTCAAGGTTGACGACAGTG+TGG - chr3.1:79916727-79916746 MS.gene48427:CDS 50.0%
TAGACTTCAAGGTGCAGCCA+TGG + chr3.1:79913536-79913555 None:intergenic 50.0%
TCGTCGGAAATGGCAGATTG+CGG - chr3.1:79911808-79911827 MS.gene48427:CDS 50.0%
TCTCTCTCTCTCACTCTCTC+TGG - chr3.1:79916198-79916217 MS.gene48427:CDS 50.0%
TGATCGTATCCAGAACCACC+GGG + chr3.1:79913363-79913382 None:intergenic 50.0%
TGGAGGATACCTTCGATCGA+AGG - chr3.1:79914789-79914808 MS.gene48427:intron 50.0%
TGTCTTCACACTTGAACCGG+TGG + chr3.1:79917861-79917880 None:intergenic 50.0%
TTAGGCTCGAGCAAAGGGAA+GGG - chr3.1:79913009-79913028 MS.gene48427:intron 50.0%
TTCTCAGATGATGCTGGTCC+TGG + chr3.1:79913267-79913286 None:intergenic 50.0%
! CTCCGATGAGTTTTGCTTGG+AGG + chr3.1:79912475-79912494 None:intergenic 50.0%
! TCGCTCCGATGAGTTTTGCT+TGG + chr3.1:79912478-79912497 None:intergenic 50.0%
!! ACAAGCACCGAGACTTTGGA+TGG - chr3.1:79915125-79915144 MS.gene48427:intron 50.0%
!! CAGAGTATTGGGAGTCAGCT+TGG - chr3.1:79914538-79914557 MS.gene48427:intron 50.0%
!! CAGGTTGGTTGATGTTTGGG+AGG - chr3.1:79915169-79915188 MS.gene48427:intron 50.0%
!! TTGGCGGGTGGCTTTAATCA+CGG - chr3.1:79917301-79917320 MS.gene48427:CDS 50.0%
!!! AGATACCGGCTTTTCTCCTG+AGG - chr3.1:79912603-79912622 MS.gene48427:intron 50.0%
AAGGTGGAGTTGCGCCCATT+CGG - chr3.1:79913934-79913953 MS.gene48427:intron 55.0%
AATCAGCAAGCTCGCGTGTC+TGG + chr3.1:79913572-79913591 None:intergenic 55.0%
ACCTGGCTCCTTTCGTGAGT+GGG - chr3.1:79916588-79916607 MS.gene48427:CDS 55.0%
AGCAATACTCCCGGTGGTTC+TGG - chr3.1:79913351-79913370 MS.gene48427:intron 55.0%
ATGTCACTCCCAGCTGCTGA+AGG + chr3.1:79913774-79913793 None:intergenic 55.0%
CAACGTCTCTCTCTCAACCC+TGG + chr3.1:79911888-79911907 None:intergenic 55.0%
CACAAACCACCACAAGGACC+AGG + chr3.1:79911760-79911779 None:intergenic 55.0%
CCACCACACAAACCACCACA+AGG + chr3.1:79911766-79911785 None:intergenic 55.0%
CGAGCGTCAGGAAAGGATGA+TGG - chr3.1:79915043-79915062 MS.gene48427:CDS 55.0%
CGCCCTTTGTTGAGCCTGTA+TGG - chr3.1:79915878-79915897 MS.gene48427:CDS 55.0%
CTTAGGCTCGAGCAAAGGGA+AGG - chr3.1:79913008-79913027 MS.gene48427:intron 55.0%
CTTCCCTTTGCTCGAGCCTA+AGG + chr3.1:79913010-79913029 None:intergenic 55.0%
GACGTTGTATTCCTCCGGTG+CGG - chr3.1:79911901-79911920 MS.gene48427:CDS 55.0%
GATGATGCTGGTCCTGGATG+TGG + chr3.1:79913261-79913280 None:intergenic 55.0%
GCTCCTAAACCCTAGATCCC+CGG + chr3.1:79911738-79911757 None:intergenic 55.0%
GGCTGCCATTGTGTGGAAGA+AGG + chr3.1:79915441-79915460 None:intergenic 55.0%
GGGGGACTCTTCTGCATAAC+AGG + chr3.1:79915855-79915874 None:intergenic 55.0%
GGTTGGAATACTCTGAGCGG+AGG + chr3.1:79915337-79915356 None:intergenic 55.0%
GTGCCTTAGGCTCGAGCAAA+GGG - chr3.1:79913004-79913023 MS.gene48427:intron 55.0%
GTTTAGGAGCCTGGTCCTTG+TGG - chr3.1:79911748-79911767 MS.gene48427:CDS 55.0%
TAGGCTCGAGCAAAGGGAAG+GGG - chr3.1:79913010-79913029 MS.gene48427:intron 55.0%
TCACTGGTCCCACTCACGAA+AGG + chr3.1:79916599-79916618 None:intergenic 55.0%
TCATGCTCGGTTCCTTGCAG+AGG - chr3.1:79912651-79912670 MS.gene48427:intron 55.0%
TCCAAGGTGGGTGAGTCATC+AGG + chr3.1:79917527-79917546 None:intergenic 55.0%
TCCTGATGACTCACCCACCT+TGG - chr3.1:79917523-79917542 MS.gene48427:intron 55.0%
TCGGAAATGGCAGATTGCGG+TGG - chr3.1:79911811-79911830 MS.gene48427:CDS 55.0%
TGTGTGGTGGTTCCGGTGAT+CGG - chr3.1:79911776-79911795 MS.gene48427:CDS 55.0%
! CCTTGTGGTGGTTTGTGTGG+TGG - chr3.1:79911763-79911782 MS.gene48427:CDS 55.0%
! GCTCTTGACGGGTGGATCTT+TGG + chr3.1:79917152-79917171 None:intergenic 55.0%
! GGATCTAGGGTTTAGGAGCC+TGG - chr3.1:79911739-79911758 MS.gene48427:CDS 55.0%
! GGTCCTTGTGGTGGTTTGTG+TGG - chr3.1:79911760-79911779 MS.gene48427:CDS 55.0%
! GGTGGTTTGTGTGGTGGTTC+CGG - chr3.1:79911769-79911788 MS.gene48427:CDS 55.0%
! TCACCGGGGATCTAGGGTTT+AGG - chr3.1:79911732-79911751 MS.gene48427:CDS 55.0%
!! AATGGTGGGCTGCCATTGTG+TGG + chr3.1:79915448-79915467 None:intergenic 55.0%
ACATGGCATACGTGGCTGGC+AGG - chr3.1:79914668-79914687 MS.gene48427:CDS 60.0%
AGGCTCAACAAAGGGCGGGT+GGG + chr3.1:79915875-79915894 None:intergenic 60.0%
AGGCTCGAGCAAAGGGAAGG+GGG - chr3.1:79913011-79913030 MS.gene48427:intron 60.0%
ATGCGTGTCACCGGGGATCT+AGG - chr3.1:79911725-79911744 MS.gene48427:CDS 60.0%
GACCTGGCTCCTTTCGTGAG+TGG - chr3.1:79916587-79916606 MS.gene48427:CDS 60.0%
GGAAGTCCGAGCGTCAGGAA+AGG - chr3.1:79915036-79915055 MS.gene48427:CDS 60.0%
GGCTGCTGAGGAAACTGCCA+GGG - chr3.1:79911868-79911887 MS.gene48427:CDS 60.0%
GGTGCCTTAGGCTCGAGCAA+AGG - chr3.1:79913003-79913022 MS.gene48427:intron 60.0%
GTTGTATTCCTCCGGTGCGG+TGG - chr3.1:79911904-79911923 MS.gene48427:CDS 60.0%
TAGGAGCCTGGTCCTTGTGG+TGG - chr3.1:79911751-79911770 MS.gene48427:CDS 60.0%
TCCCACTCACGAAAGGAGCC+AGG + chr3.1:79916592-79916611 None:intergenic 60.0%
TGCGTGTCACCGGGGATCTA+GGG - chr3.1:79911726-79911745 MS.gene48427:CDS 60.0%
TGGCTGCTGAGGAAACTGCC+AGG - chr3.1:79911867-79911886 MS.gene48427:CDS 60.0%
TGGGCGCAACTCCACCTTGT+TGG + chr3.1:79913932-79913951 None:intergenic 60.0%
! AATGGCGGAAACCACCGCAC+CGG + chr3.1:79911918-79911937 None:intergenic 60.0%
! TTGGTGATTCAGGGCGCGGA+TGG - chr3.1:79917705-79917724 MS.gene48427:intron 60.0%
CACTTGCGGAGGCCCTTCGA+AGG - chr3.1:79915099-79915118 MS.gene48427:intron 65.0%
CAGGCTCAACAAAGGGCGGG+TGG + chr3.1:79915876-79915895 None:intergenic 65.0%
GCAGCTGGGAGTGACATCGC+TGG - chr3.1:79913777-79913796 MS.gene48427:intron 65.0%
GCGGATGGAGTAGCACGTGG+AGG - chr3.1:79917720-79917739 MS.gene48427:intron 65.0%
GCTCAACAAAGGGCGGGTGG+GGG + chr3.1:79915873-79915892 None:intergenic 65.0%
GGCTCAACAAAGGGCGGGTG+GGG + chr3.1:79915874-79915893 None:intergenic 65.0%
TGGTGGGAAGTCCGAGCGTC+AGG - chr3.1:79915031-79915050 MS.gene48427:CDS 65.0%
GCACTTAGCGCAGCGCGCAG+TGG + chr3.1:79911975-79911994 None:intergenic 70.0%
GGCGCGGATGGAGTAGCACG+TGG - chr3.1:79917717-79917736 MS.gene48427:intron 70.0%
TTAGCGCAGCGCGCAGTGGC+AGG + chr3.1:79911971-79911990 None:intergenic 70.0%
GGCGGAAACCACCGCACCGG+AGG + chr3.1:79911915-79911934 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 79911725 79918069 79911725 ID=MS.gene48427
chr3.1 mRNA 79911725 79918069 79911725 ID=MS.gene48427.t1;Parent=MS.gene48427
chr3.1 exon 79917783 79918069 79917783 ID=MS.gene48427.t1.exon1;Parent=MS.gene48427.t1
chr3.1 CDS 79917783 79918069 79917783 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79915979 79917377 79915979 ID=MS.gene48427.t1.exon2;Parent=MS.gene48427.t1
chr3.1 CDS 79915979 79917377 79915979 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79915817 79915905 79915817 ID=MS.gene48427.t1.exon3;Parent=MS.gene48427.t1
chr3.1 CDS 79915817 79915905 79915817 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79915478 79915563 79915478 ID=MS.gene48427.t1.exon4;Parent=MS.gene48427.t1
chr3.1 CDS 79915478 79915563 79915478 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79915198 79915360 79915198 ID=MS.gene48427.t1.exon5;Parent=MS.gene48427.t1
chr3.1 CDS 79915198 79915360 79915198 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79914984 79915104 79914984 ID=MS.gene48427.t1.exon6;Parent=MS.gene48427.t1
chr3.1 CDS 79914984 79915104 79914984 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79914623 79914780 79914623 ID=MS.gene48427.t1.exon7;Parent=MS.gene48427.t1
chr3.1 CDS 79914623 79914780 79914623 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79913358 79913442 79913358 ID=MS.gene48427.t1.exon8;Parent=MS.gene48427.t1
chr3.1 CDS 79913358 79913442 79913358 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79913046 79913258 79913046 ID=MS.gene48427.t1.exon9;Parent=MS.gene48427.t1
chr3.1 CDS 79913046 79913258 79913046 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79912705 79912766 79912705 ID=MS.gene48427.t1.exon10;Parent=MS.gene48427.t1
chr3.1 CDS 79912705 79912766 79912705 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
chr3.1 exon 79911725 79912412 79911725 ID=MS.gene48427.t1.exon11;Parent=MS.gene48427.t1
chr3.1 CDS 79911725 79912412 79911725 ID=cds.MS.gene48427.t1;Parent=MS.gene48427.t1
Gene Sequence

>MS.gene48427

ATGCGTGTCACCGGGGATCTAGGGTTTAGGAGCCTGGTCCTTGTGGTGGTTTGTGTGGTGGTTCCGGTGATCGGATTTGTAATTCGTCGGAAATGGCAGATTGCGGTGGCTAGAAATGAAGAGATCAAGAGGCTTTTGATTTTGGCTGCTGAGGAAACTGCCAGGGTTGAGAGAGAGACGTTGTATTCCTCCGGTGCGGTGGTTTCCGCCATTAACAATTATCAATGTGCTCTCTGCTATTTTCCTGCCACTGCGCGCTGCGCTAAGTGCAAATCTGTTCGATACTGGTGCGTTGTTCTAATCGATTGAATTTGTTAAACTGCGCTGAACTTTTCGACCTATTTTTTTTTGTGTGGCATGGATTCTGTTTTTTTCGGTTCCATTATGATGATTTTGTGCAGTAATTTTCTTATTCTTTGTTAGGAATGTTAATTATGATGATTTTGTGGTTGATTGAAGATGTTTATGATTAGGAGAGGGAAAAATGTTTCAGATAGTTTTGCGTCTAAGTTTTGGAGATGAGTTTTGTGGTCCCTTTTACAGACTATGTTGAATGATTGAGAGGATTGTGATGTTCTGTATTAATGGGTTGGGTTGTGAATGCATTGTTTTTTCTTAACATATTTCTGATTGAGCACTTTTGTAGAAATAATATGCATGTCACTTGTTTGATCAGTTTCATGTTTTTTCAGCTCCACTGATTGCCAAACCGTTCATTGGCGTCAAGGTCATAAATTTGATTGTCGTCCTCCAAGCAAAACTCATCGGAGCGATGGGGTTACAAGTGATATTGGAAAGAGGGAATTGGAGCATGATTACTCTGGTAACCATGAGGAGAAATCTGAAAGCAGAGGTGCAGAGTGTAAAATACCCTATGAAGATACCGGCTTTTCTCCTGAGGTTTCATTTGGAAAGGATGATAATATTCATGCTCGGTTCCTTGCAGAGGATAATTTAGCAGATTCTAATTCTGAATTTTCCAGTAACTCATTTTCTGGATTTTCGGCTTCCACAAATTCAGGTGATTCATCTGATGATTCGTCTGTCTGTGAGAGTATCATCTCAAATGAGCATGACAGATCAGAGGGACATGTTTCTGTTGTTCACACCCTTGACCTTACCGATAAAACCACAATTGATAGCAAGGTGGATGCAGCAATGTCTTCTTCACCAAAGTTTGCTAGTTTGCTTGATTCAGTTGATGGTTCTTCTACAGTTCATAAATTAAATCATGTTGCTCCTGGTTCTAGTAATGAAGAGAGGAAGCTTGCATCAAATGGTGCCTTAGGCTCGAGCAAAGGGAAGGGGGCAAAAATTGAGCCTTCTGGATTTTGGGATAAAGCTCTTGATTCGAGAGGGATTAAAGATGACACTTATCCATCCCATTCTGATGAATCAGCTGGTGAAAAGACTGATTCTGGATTGTCATTTCGCTTTCAATTCAGTACCACACCTCCTTTGCATATACAAGACACCGATTCTAAAGAATCTTCGAATTATGATGCTCTTCCAAACTCTGTTGGGAAGAATATGCCACATCCAGGACCAGCATCATCTGAGAATGTAATTCATTCTTCAAAGGCAAGGAACCTCTCATTCATCAACGGCAAAGATGCCAATATTATGAGCAATACTCCCGGTGGTTCTGGATACGATCAATTGGAATCTAAAGACAGGTCTGAGCCGCCTCTATATTCTTTTTCCTCCCAATCCTCTAGTATTGGCAAAGATCCAGGTTCTGCAGATGCTATGAGCATACATAACTTGCAATCATCTAGCTCTGTGGCATCAAATCATGTTGTGGGCAACCATGGCTGCACCTTGAAGTCTACCGATAGTAGATGCCAGACACGCGAGCTTGCTGATTCTAAATTAGCTTCTACAACTGAAGTGATTTCACATCCCGGTACAAAACATAGGAAGAATGAATACGGGACTGTCACTTCTCATGTTGCTAGCTATTCTGGAAATTCTAAGAGTGGCTTGAAAACATCTGTTTTAAAAGTTGTTGATCAGTTTAGAGGATCAAATTTGTCAAAGCAAGTTCCTTCAGCAGCTGGGAGTGACATCGCTGGAAAATACAATGACAAGGTTCTTTTAGAACAATTCTTTGTGCTATATTTTGCCATTAGGGACTGTTGCCTTACACTTACAATTGCTGCAGGGTTTTTTTCCATATGAAACATTTGTCAAGCTGTATAACTCCAACAAGGTGGAGTTGCGCCCATTCGGTCTTATAAATATTGGAAACAGGTAATTTGAAATTAATACTAAACATGTTGGGGGATAATTGAAGCATACTTGTTTGTGTATTTATAGGTTTACTCTATAATGAATTGTTTAAAACAATCTTTGTTTGCCAGTTCGTGTAAGTTATTTTTTACCCTGATATATTAAATGATAAATGGAAATGGTCAAGTTTTTTATTTTCTTCTGGAATCAATTGCTCTTCTATTGTTTCGTGTTTATTTTTGAGCTTTTCTAAGTTGTCAATTTTTTTTTGCAGTTGTTATGCTAATGCCGTACTTCAGTGCCTAGCTTTTACACCACCCTTATCTGCTTATTTGGTTCAAGGACTACACTCTAAATCATGTATGTGTAATGGGTGTTTCTTCTCTCATGGAATCACATATGCCATGTTTCTTGAATACTATTGGTTGTAACTTATAACTGTTTCCCTTTGGTAAATATCTCTTCTGTAAATTTCAGGTACAAATAAAACATGGTGTTTCATCTGTGAATTTGAAAGATTGATTTTGAAGTCGAAGGATACAAAATCTCCACTATCTCCAACGGGCATACTTTCTCAACTACAGAGTATTGGGAGTCAGCTTGGAAATGGCAAAGAAGAAGATGCTCACGAATTTCTAAGGTATTCTTTCATACAATTTTTAGCCGCACAATACATCAAACTATTGTTTCATAACTCATTTTAAACTAATCACATGGCATACGTGGCTGGCAGGCATGCTATTGACACAATGCAATCTGTATGCCTTATGGAAGCTGGGATTAATGCATCAGGTTCATTGGAAGAGGACACTACTTTAATGGGTCAAACATTTGGAGGATACCTTCGATCGAAGGTAATTTTATATTTCTATCTGGTAAATTGATAAACAACTATCTGCTATGATTTTATTTATTCCCCAGTCATAGTGCAATACAATGTTGGCTTGTTTTTGAAATAGATAATTTAAGTTTCATTTTAGTTAATACATTATAACATATGTTGATTAGAAATAACAAGGAGAGGATGATGGATAAAATGTTATAACTCATTTGGCAGATAAAATGCATGAAATGTGGTGGGAAGTCCGAGCGTCAGGAAAGGATGATGGATCTAACTGTTGAGATAGAAGGGGAAATATCAACACTTGCGGAGGCCCTTCGAAGGTTTACAAGCACCGAGACTTTGGATGGAGAAAACAAGTACCACTGTGTCAGGTTGGTTGATGTTTGGGAGGCCTCTTTAATGTTTTCAATCTTAACATATGATTGGAACTCAGATTTCTTAAATTAAATATGGAGACTAGTTAGTTCCAAGGTAGATTTACGTGATCTGTCAAAAACATAAACAAGCAAGACCATAAATTGAAAAAAAAAAGTCCTCCGCTCAGAGTATTCCAACCTATTCACACATTCTCATCCAACTGTTTCTTCTTTTATCCATTTCTGAGCTGTAGGTAATGTTCCCCTTGTCTCTCCCTTTTCCTTCTTCCACACAATGGCAGCCCACCATTCCGTCTAGAATTTACCTAGAATAAAGGTCTGTCAGTGTCTTGCTATAGGATTTCATCCTTATAAATATGCGGTTACTACTTCCAAAAACACGTTAATGCTTTCGTTTCATGGCTGTGAATGAACGGTATCTCCATAGGAAGAGTTGGGTGACTGATTGGTTTTTTAGGGTAGACTAAGTAAAAATAAAGGTAATCAGGGATGCCAGAGAATGAACTAGTAAATTCTAATAACAGATCTTTATGTTTGATCACATTGAATTGTTGGTGTAGAGGATAAGTGGATTTTGCTGGCATGAGATTGGATTGAACCTGAGGAAATGTTCATGACTAGGGTTCCTAAATGTACACCGTAGAGGTTTGATTACATTGCAGGTCTAGCAATCTCCTGTTATGCAGAAGAGTCCCCCACCCGCCCTTTGTTGAGCCTGTATGGATCGTTTTTCTTAAAACATGTTTCATTATGAGGGAACAATTTTTAGTGATGTTTAGTTAAACTGGTTGTTGAAACTTAATGGCTATGATGTTGAATAACGTTTTTCTCTTTCCAAGTCACCGGTTCATGCATTATTTTATCTTGGTCGTTCTTACCTCACAGAAGCATCAAATGATGCTAGTTTCACAAATCTACACCTACAAAAAGTAGAACTATGCCTTGCTGCCATTGATGATTGAGCTGCTTAACAATCTGTAAAATCAATTATGCGAAAGAAATAGATGTTATCGTTTCTTCTCTCTCTCTCTCACTCTCTCTGGTGTGTGTAATTATTTGGCTCTGGCTAGTTGCTTGTTATTTTGATTTTGGAGCTCTAAGATGTTGAATATTATTTAGATTACTAGTACTCAAATTACGTTCCAAATTATTAATCAACTATTTCTATTTCAAGATGTAAATCCTATCAGAAGGCCAAGAAGAAGCTGACAGTTTCAGAGGCACCCAATATTCTTACAGTTGCATTGAAGCGATTTCAGGTATTTCACACATTAAATTACAAGTTAAGATATTGCTATCTACATTTCTTGCAGTCTGTATATGCAGAGTTTACCTCATTTGTTACATTTGTATCGCAGTCTGGAAAATTCGGGAAGCTCAACAAGCCTGTTCAATTTCCAGAAATACTTGACCTGGCTCCTTTCGTGAGTGGGACCAGTGATAAGACACCCATTTACAGATTGTACGGAGTGGTTGTTCATTTGGATGTTATGAATGCTTCTTTTTCGGGTCACTATGTGTGCTACTTGAAGAATATTCAAAATAAATGGTTCAAGGTTGACGACAGTGTGGTAAGTCCCTTTGTTTCTATTTGTTTGCAATCTTGAGAGCAGAATTCTTTTGGTTCCCAAATGTACTTCTTGGTTTATGTTTTATTAACTTATAACCAAAATTTATTGTAACTGCATTACAAATATGAATAAAAATTTATTAGGTGTGGGTCTTTCCTGTTAGTTGCACCTTTGAAAGAATTCCTTTAGGTGTGGGTCATTCACAGTGATTAGTCTGGTCTGTCTTAGTGATACTAATGTTGTTGTCCTTGGTTTATTTCTTGTATGTATGTCTTGCAGGTAACAGCAGTTGAATTAGAGAGAGTCTTGACAAAAGGAGCATATATGCTTTTTTATGCTAGGTAAAATAGCTGCTTTTTTGTGTTCATGTTGAGGGTGGTTAATATTTGAAAAAACAGCACCAAAGATCCACCCGTCAAGAGCTGAGTTATGGCTCAATTAGGTTTAACTGATTAATAACAAATGAAAAAACGGATTGCATAATAAGAAATTATCAGACCAAAAATATAATAGTTCATAGGCTAACTGGTTGAAGCACCAGTTTTTGAAAGATTGGCGGGTGGCTTTAATCACGGTTCCTTTACATTATATTGTCACTTATCGGCTTCTCTGATCAGCTGAATCATTTTGTAGGTGCTCTCCAAGGGCCCCAAAATTGATTAGAAACAGGTTATTATCCCAAGATTCAAAAAGTAAGGTCAATGGAAAGTCTACAAAAGCAAGATCTACCTCATCAAATTCTGGTGCGGCTGAACCCATCAGTAGTTCAGTATCTCCTGATGACTCACCCACCTTGGAGTCTTTCTATTCAAGGTTTCACCATCTGAAAAAGATTTTAGAGGAAGACTCATCAAGTGATAGTTCATCCCTTTTCAGCAGTAATTCCGATGAAGGTTCTTGCAGTACTGATAGTACCCGTGATTCAACTAGCATGGATGACTTCTCCGATTATATTTTTGGTGATTCAGGGCGCGGATGGAGTAGCACGTGGAGGAATTCTGATTCTGACACGTCTTCCTCCTCATCTCCCTTGAATTGTAGACAGTCGCCCCTATCTGATATGGACAAATATGATTCAGTTTCTCCAGAGGCAACTAATTTTCGAATTCCCACCGGTTCAAGTGTGAAGACAGATAGGGATGATGTTATTTCCCATTTGCATTCTGACACAATTTTACAGCATAGAAAGTTGGATAGTAGTAGCATTAGCAGCAATAGTAGTAGTAAGGACGCTGACTCATTTCTGAAACTAGGATCTAACCATTCAAATGATAAGAACTCTGTTGTATCGTGTAGAAAATCAAGGAAAAGAACGGAATGA
Protein sequence

>MS.gene48427.t1

MRVTGDLGFRSLVLVVVCVVVPVIGFVIRRKWQIAVARNEEIKRLLILAAEETARVERETLYSSGAVVSAINNYQCALCYFPATARCAKCKSVRYCSTDCQTVHWRQGHKFDCRPPSKTHRSDGVTSDIGKRELEHDYSGNHEEKSESRGAECKIPYEDTGFSPEVSFGKDDNIHARFLAEDNLADSNSEFSSNSFSGFSASTNSGDSSDDSSVCESIISNEHDRSEGHVSVVHTLDLTDKTTIDSKVDAAMSSSPKFASLLDSVDGSSTVHKLNHVAPGSSNEERKLASNGALGSSKGKGAKIEPSGFWDKALDSRGIKDDTYPSHSDESAGEKTDSGLSFRFQFSTTPPLHIQDTDSKESSNYDALPNSVGKNMPHPGPASSENVIHSSKARNLSFINGKDANIMSNTPGGSGYDQLESKDRSEPPLYSFSSQSSSIGKDPGSADAMSIHNLQSSSSVASNHVVGNHGCTLKSTDSRCQTRELADSKLASTTEVISHPGTKHRKNEYGTVTSHVASYSGNSKSGLKTSVLKVVDQFRGSNLSKQVPSAAGSDIAGKYNDKGFFPYETFVKLYNSNKVELRPFGLINIGNSCYANAVLQCLAFTPPLSAYLVQGLHSKSCTNKTWCFICEFERLILKSKDTKSPLSPTGILSQLQSIGSQLGNGKEEDAHEFLRHAIDTMQSVCLMEAGINASGSLEEDTTLMGQTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEISTLAEALRRFTSTETLDGENKYHCVRCKSYQKAKKKLTVSEAPNILTVALKRFQSGKFGKLNKPVQFPEILDLAPFVSGTSDKTPIYRLYGVVVHLDVMNASFSGHYVCYLKNIQNKWFKVDDSVVTAVELERVLTKGAYMLFYARCSPRAPKLIRNRLLSQDSKSKVNGKSTKARSTSSNSGAAEPISSSVSPDDSPTLESFYSRFHHLKKILEEDSSSDSSSLFSSNSDEGSCSTDSTRDSTSMDDFSDYIFGDSGRGWSSTWRNSDSDTSSSSSPLNCRQSPLSDMDKYDSVSPEATNFRIPTGSSVKTDRDDVISHLHSDTILQHRKLDSSSISSNSSSKDADSFLKLGSNHSNDKNSVVSCRKSRKRTE