AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055513


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055513.t1 MTR_3g098990 95.960 495 16 3 1 494 1 492 0.0 924
MS.gene055513.t1 MTR_5g095720 40.749 427 211 13 93 494 444 853 3.33e-69 237
MS.gene055513.t1 MTR_3g058970 40.238 420 215 9 93 490 371 776 1.05e-66 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055513.t1 AT3G48710 48.372 430 197 10 69 494 30 438 1.60e-109 333
MS.gene055513.t1 AT5G63550 48.798 416 170 11 94 494 94 481 1.83e-94 296
MS.gene055513.t1 AT5G63550 48.309 414 174 10 94 494 94 480 3.80e-93 293
MS.gene055513.t1 AT5G55660 52.632 171 73 4 93 261 323 487 9.47e-46 171
MS.gene055513.t1 AT4G26630 43.509 285 128 5 12 268 207 486 6.12e-42 160
MS.gene055513.t1 AT4G26630 43.509 285 128 5 12 268 207 486 6.12e-42 160

Find 95 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAAGCTGTTGGAATTTC+TGG 0.096765 3.2:-82392496 MS.gene055513:CDS
TTCACACTACTCTTGTTTAT+TGG 0.122133 3.2:+82392625 None:intergenic
TTCTGGTTTGGGTTCATCTT+TGG 0.192982 3.2:+82394704 None:intergenic
TTCAACTTCTTCTTCTGGTT+TGG 0.223760 3.2:+82394692 None:intergenic
TTCAATTATCAGTCCTTTAC+TGG 0.245498 3.2:+82394386 None:intergenic
TCTTCCCAAACAGTATATTA+TGG 0.253248 3.2:+82393051 None:intergenic
ATGTTGACAGGTAAACATTT+TGG 0.262420 3.2:-82390182 MS.gene055513:intron
TCAACTTCTTCTTCTGGTTT+GGG 0.267047 3.2:+82394693 None:intergenic
CTGCAACATCTTCATCTTCT+TGG 0.269136 3.2:+82391125 None:intergenic
GAACCTTCACCTTCGAAGTT+TGG 0.300483 3.2:-82394420 MS.gene055513:CDS
GTTACTTCAACTTCTTCTTC+TGG 0.304574 3.2:+82394687 None:intergenic
ATGCTCCATAATATACTGTT+TGG 0.317065 3.2:-82393056 MS.gene055513:CDS
ACCGTCTTCCTTTCCCTAGT+TGG 0.341819 3.2:+82394456 None:intergenic
AACTGCAAAGGCTGCGGTTA+AGG 0.346132 3.2:-82390789 MS.gene055513:CDS
GAAGTACTCTTGTGAGCTTT+TGG 0.351465 3.2:+82391046 None:intergenic
GGAAGATGCTGGTGAGAAGA+AGG 0.360035 3.2:-82394538 MS.gene055513:CDS
TAAGGAAGTAGATTTCAATA+AGG 0.361423 3.2:-82390398 MS.gene055513:intron
TTCATCATCATCATCTTTCT+CGG 0.365632 3.2:+82394602 None:intergenic
TGCAACATCTTCATCTTCTT+GGG 0.375038 3.2:+82391126 None:intergenic
CTATCACTCGTCGGAGTAAC+CGG 0.377163 3.2:+82394480 None:intergenic
TTTGGTATCGTCTAGGGTTT+CGG 0.386462 3.2:+82394749 None:intergenic
AACAATCTAAAGAGGAATAT+AGG 0.417865 3.2:-82392929 MS.gene055513:CDS
CCCACACATAACCAGAAAAC+TGG 0.422298 3.2:+82392906 None:intergenic
CGGTTACTCCGACGAGTGAT+AGG 0.432059 3.2:-82394479 MS.gene055513:CDS
AAAGGAAAAGCAAGATACTA+AGG 0.439714 3.2:-82390828 MS.gene055513:CDS
TGCTCCATAATATACTGTTT+GGG 0.440179 3.2:-82393055 MS.gene055513:CDS
TGTGGATTTAGCTTCAGCTT+TGG 0.444959 3.2:+82390994 None:intergenic
AGCATATGCAGGTTGTCGTC+AGG 0.453182 3.2:+82393074 None:intergenic
AGTTGTAGTTGAGATTCTTA+AGG 0.454398 3.2:-82390416 MS.gene055513:CDS
CAGCTCAAGGATATTCCTAA+TGG 0.456524 3.2:-82394262 MS.gene055513:intron
ACCTTTGCAAGTGTTTCTCC+AGG 0.461153 3.2:+82392102 None:intergenic
CGACGAGTGATAGGCCAACT+AGG 0.464921 3.2:-82394470 MS.gene055513:CDS
CTGCCTACTCGGCTCTACCT+TGG 0.468843 3.2:+82390450 None:intergenic
TAAAGGACTGATAATTGAAA+AGG 0.476582 3.2:-82394382 MS.gene055513:intron
GGAAGGTCTTCTTCCAGTAA+AGG 0.477738 3.2:-82394399 MS.gene055513:CDS
GATGTTGCAGTGGCAAATAA+TGG 0.486223 3.2:-82391112 MS.gene055513:CDS
AAAACAGAGAACAAGGGTAA+AGG 0.493647 3.2:-82392707 MS.gene055513:CDS
GGTTGCAGGTTGATCTGACT+TGG 0.495113 3.2:+82390868 None:intergenic
CTTCACCTTCGAAGTTTGGA+AGG 0.500580 3.2:-82394416 MS.gene055513:CDS
GCAACCTCTAGCAAATCTCC+TGG 0.500613 3.2:-82392120 MS.gene055513:CDS
GAAGATGCTGGTGAGAAGAA+GGG 0.505112 3.2:-82394537 MS.gene055513:CDS
CAAGGTAGAGCCGAGTAGGC+AGG 0.505315 3.2:-82390449 MS.gene055513:CDS
GGAACTGTCTGCAAAGCTGT+TGG 0.508885 3.2:-82392505 MS.gene055513:CDS
GCGTGCATGTCCTGCCTACT+CGG 0.511396 3.2:+82390439 None:intergenic
TGTGATATCCTCCGCCAACT+TGG 0.519770 3.2:-82390278 MS.gene055513:intron
GATGAGGAGGAGGAAGATGC+TGG 0.524251 3.2:-82394549 MS.gene055513:CDS
GTCTAGGGTTTCGGTAGCCA+TGG 0.528885 3.2:+82394758 None:intergenic
AAAGATGATGATGATGAAGA+TGG 0.532403 3.2:-82394597 MS.gene055513:CDS
CTTCCAAACTTCGAAGGTGA+AGG 0.533904 3.2:+82394417 None:intergenic
AAACAAGAGTAGTGTGAAGA+AGG 0.535530 3.2:-82392620 MS.gene055513:intron
GTATATTATGGAGCATATGC+AGG 0.537093 3.2:+82393063 None:intergenic
AAGGCTGCGGTTAAGGATCA+AGG 0.539742 3.2:-82390782 MS.gene055513:intron
GGTGGGTAAATCAGAGGGAG+AGG 0.543397 3.2:-82391077 MS.gene055513:CDS
TCATCCTCTTCAACATCAGA+AGG 0.546993 3.2:+82391181 None:intergenic
GCATAGAAAAGCAGAGGTGA+AGG 0.548691 3.2:-82390147 MS.gene055513:CDS
GTCAGGTTAACAATCTAAAG+AGG 0.549753 3.2:-82392937 MS.gene055513:intron
TCCTGGAGAAACACTTGCAA+AGG 0.550947 3.2:-82392103 MS.gene055513:intron
AAGCAAAACTGCAAAGGCTG+CGG 0.555092 3.2:-82390795 MS.gene055513:CDS
GGCTGCAAGCAAAACTGCAA+AGG 0.556180 3.2:-82390801 MS.gene055513:CDS
AGACCAAGGTAGAGCCGAGT+AGG 0.561195 3.2:-82390453 MS.gene055513:CDS
AGAGGTCTTCTTAACAGATG+TGG 0.571409 3.2:+82390976 None:intergenic
AGATCGTACCAAGTTGGCGG+AGG 0.575455 3.2:+82390270 None:intergenic
AATGGAAGTGATAACGAGGT+GGG 0.578180 3.2:-82391094 MS.gene055513:CDS
GTCGTCAGAGAAGAAGAGTC+CGG 0.583062 3.2:-82394499 MS.gene055513:CDS
AAAGCCTTCTGATGTTGAAG+AGG 0.584119 3.2:-82391185 MS.gene055513:CDS
TTGCATCAGAAAGTTCAGCT+TGG 0.584847 3.2:+82391158 None:intergenic
GACGAGTGATAGGCCAACTA+GGG 0.592833 3.2:-82394469 MS.gene055513:CDS
AAAGCAAGATACTAAGGGAA+AGG 0.596671 3.2:-82390822 MS.gene055513:CDS
CTAGTTGGCCTATCACTCGT+CGG 0.600264 3.2:+82394471 None:intergenic
AACGAGGTGGGTAAATCAGA+GGG 0.602782 3.2:-82391082 MS.gene055513:CDS
GGGACGTGGTACTCAGCTCA+AGG 0.605098 3.2:-82394275 MS.gene055513:CDS
AAAAGATCGTACCAAGTTGG+CGG 0.607538 3.2:+82390267 None:intergenic
GCCAACTAGGGAAAGGAAGA+CGG 0.609544 3.2:-82394457 MS.gene055513:CDS
GTGATAGGCCAACTAGGGAA+AGG 0.614124 3.2:-82394464 MS.gene055513:CDS
AAGGAAAAGCAAGATACTAA+GGG 0.616103 3.2:-82390827 MS.gene055513:CDS
TGATGCTGATGATGAGGAGG+AGG 0.619807 3.2:-82394559 MS.gene055513:CDS
GAACATCAGTAGTAGCATGT+GGG 0.620057 3.2:+82392469 None:intergenic
TTATGTGTGGGCTGAAAATG+AGG 0.621414 3.2:-82392894 MS.gene055513:intron
TTTAATGCATAGAAAAGCAG+AGG 0.621749 3.2:-82390153 MS.gene055513:CDS
GAAGACCTTCCAAACTTCGA+AGG 0.621788 3.2:+82394411 None:intergenic
AGAACATCAGTAGTAGCATG+TGG 0.622938 3.2:+82392468 None:intergenic
TTCTCCAGGAGATTTGCTAG+AGG 0.624862 3.2:+82392116 None:intergenic
AGAGAACAAGGGTAAAGGAG+AGG 0.625869 3.2:-82392702 MS.gene055513:CDS
TAATGGAAGTGATAACGAGG+TGG 0.625907 3.2:-82391095 MS.gene055513:CDS
TAACGAGGTGGGTAAATCAG+AGG 0.626281 3.2:-82391083 MS.gene055513:CDS
AACATCAGTAGTAGCATGTG+GGG 0.636718 3.2:+82392470 None:intergenic
TAAAAGTAGTAAGAAGACCA+AGG 0.637365 3.2:-82390467 MS.gene055513:CDS
AGAAGATGAAGATGTTGCAG+TGG 0.648957 3.2:-82391122 MS.gene055513:CDS
TGCTGATGCTGATGATGAGG+AGG 0.650159 3.2:-82394562 MS.gene055513:CDS
CGATGCTGATGCTGATGATG+AGG 0.652325 3.2:-82394565 MS.gene055513:CDS
AAGAGAAGCAGAATCCTGCT+CGG 0.653130 3.2:+82390892 None:intergenic
AACTAGGGAAAGGAAGACGG+TGG 0.691004 3.2:-82394454 MS.gene055513:CDS
ACTGTTTGGGAAGAAAACAA+AGG 0.691158 3.2:-82393042 MS.gene055513:intron
TGAAGTAACTGAACAAGACG+CGG 0.710408 3.2:-82394673 MS.gene055513:CDS
AAATAATGGAAGTGATAACG+AGG 0.765529 3.2:-82391098 MS.gene055513:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATTATACATTGTTTA+CGG + chr3.2:82392238-82392257 None:intergenic 10.0%
!! GATTTATTTCATTTATTTAA+AGG - chr3.2:82391617-82391636 MS.gene055513:intron 10.0%
!!! GTTTGTTATTTAATATAAAT+GGG - chr3.2:82392186-82392205 MS.gene055513:intron 10.0%
!!! TTTTTTTCTCAATTTTTTAT+CGG - chr3.2:82390644-82390663 MS.gene055513:intron 10.0%
!! AATAAAAAAGATTATTTGTC+TGG + chr3.2:82392332-82392351 None:intergenic 15.0%
!! ATGCAAAAAAAAAAAGAAAA+AGG + chr3.2:82390501-82390520 None:intergenic 15.0%
!! TTCAGAATAACAAAAAATTA+GGG + chr3.2:82394004-82394023 None:intergenic 15.0%
!!! AGACAAATAATCTTTTTTAT+TGG - chr3.2:82392331-82392350 MS.gene055513:intron 15.0%
!!! GGTTTGTTATTTAATATAAA+TGG - chr3.2:82392185-82392204 MS.gene055513:intron 15.0%
!!! GTTTTTGATTAATTTGATTT+TGG - chr3.2:82390303-82390322 MS.gene055513:intron 15.0%
!!! TGTCTTTATTTTATTCATTT+TGG - chr3.2:82392535-82392554 MS.gene055513:intron 15.0%
!!! TTTTTTGGTATTGATTTTTT+TGG + chr3.2:82393692-82393711 None:intergenic 15.0%
!! AATGAAATAAATCTTTGCAA+AGG + chr3.2:82391610-82391629 None:intergenic 20.0%
!! AATTAATAATATGTCTGATG+AGG - chr3.2:82394504-82394523 MS.gene055513:CDS 20.0%
!! ACAATTAAAATCATCCATAT+AGG + chr3.2:82390526-82390545 None:intergenic 20.0%
!! ATGAAAATAAAATTTAGCTG+TGG + chr3.2:82394672-82394691 None:intergenic 20.0%
!! GAGAAAACTTAATTAATGTT+TGG - chr3.2:82392978-82392997 MS.gene055513:intron 20.0%
!! GTTCAGAATAACAAAAAATT+AGG + chr3.2:82394005-82394024 None:intergenic 20.0%
!! TCAGAATAACAAAAAATTAG+GGG + chr3.2:82394003-82394022 None:intergenic 20.0%
!! TGAAAATAAAATTTAGCTGT+GGG + chr3.2:82394671-82394690 None:intergenic 20.0%
!!! ATAAATGGGTTAATATCATT+TGG - chr3.2:82392200-82392219 MS.gene055513:intron 20.0%
!!! TATATCATTTTTGAATCCAA+AGG - chr3.2:82392025-82392044 MS.gene055513:intron 20.0%
!!! TTTATTTTCCATTTTAGAAG+TGG + chr3.2:82392061-82392080 None:intergenic 20.0%
!!! TTTTTTTTGCATTTCCTATA+TGG - chr3.2:82390509-82390528 MS.gene055513:intron 20.0%
! AACAATCTAAAGAGGAATAT+AGG - chr3.2:82391683-82391702 MS.gene055513:intron 25.0%
! AACTAAAGGTTTAAAAACTG+TGG + chr3.2:82393952-82393971 None:intergenic 25.0%
! AAGATCATCAAACATAAAGA+GGG + chr3.2:82393873-82393892 None:intergenic 25.0%
! AATAGATATGAATCTTTGTG+AGG - chr3.2:82391780-82391799 MS.gene055513:intron 25.0%
! AATTATAAGTCACGCTTATT+GGG + chr3.2:82391144-82391163 None:intergenic 25.0%
! AGAATAACAAAAAATTAGGG+GGG + chr3.2:82394001-82394020 None:intergenic 25.0%
! ATAGATATGAATCTTTGTGA+GGG - chr3.2:82391781-82391800 MS.gene055513:intron 25.0%
! ATCTACATCTTCACAATTAT+TGG - chr3.2:82391877-82391896 MS.gene055513:intron 25.0%
! ATTTATTCGCTAAAATGAAC+AGG + chr3.2:82393195-82393214 None:intergenic 25.0%
! CAGAATAACAAAAAATTAGG+GGG + chr3.2:82394002-82394021 None:intergenic 25.0%
! CTAGAACAAATATTCAGAAT+TGG + chr3.2:82392674-82392693 None:intergenic 25.0%
! GAAGATATCTTCATACAAAT+TGG + chr3.2:82393103-82393122 None:intergenic 25.0%
! GAATATATGTGATGTATTTG+AGG + chr3.2:82392878-82392897 None:intergenic 25.0%
! GCAAACAAAAATAAACATGT+GGG + chr3.2:82391305-82391324 None:intergenic 25.0%
! TAAAGGACTGATAATTGAAA+AGG - chr3.2:82390230-82390249 MS.gene055513:intron 25.0%
! TAAGGAAGTAGATTTCAATA+AGG - chr3.2:82394214-82394233 MS.gene055513:intron 25.0%
! TGATAAAATTTCTTCCTTCA+GGG - chr3.2:82394371-82394390 MS.gene055513:intron 25.0%
! TTCAAGATAGTTCCATAAAA+AGG - chr3.2:82392948-82392967 MS.gene055513:intron 25.0%
! TTGAACATAATCACATATGT+TGG + chr3.2:82390615-82390634 None:intergenic 25.0%
! TTTATGGAACTATCTTGAAT+GGG + chr3.2:82392947-82392966 None:intergenic 25.0%
! TTTATTCGCTAAAATGAACA+GGG + chr3.2:82393194-82393213 None:intergenic 25.0%
! TTTCAATAACCAAAATGGTA+TGG + chr3.2:82391379-82391398 None:intergenic 25.0%
!! AAGTAATTGGTTTCAACAAA+AGG + chr3.2:82391278-82391297 None:intergenic 25.0%
!! CTTTTCTATGCATTAAATCA+AGG + chr3.2:82394456-82394475 None:intergenic 25.0%
!! TATAGTTGATTGAAGTATCA+TGG - chr3.2:82391049-82391068 MS.gene055513:CDS 25.0%
!! TTCTAACAAAACATGTTTTC+AGG - chr3.2:82392083-82392102 MS.gene055513:intron 25.0%
!! TTTTATGGAACTATCTTGAA+TGG + chr3.2:82392948-82392967 None:intergenic 25.0%
!! TTTTGCAATTAAATGTTGAC+AGG - chr3.2:82394418-82394437 MS.gene055513:CDS 25.0%
!!! AAAAATTTTAACCTGCAAAC+TGG + chr3.2:82394267-82394286 None:intergenic 25.0%
!!! ACTGACTTTCATTAATCTTT+TGG - chr3.2:82391400-82391419 MS.gene055513:intron 25.0%
!!! CATTTTTTCTCTCTCAATTT+TGG - chr3.2:82390261-82390280 MS.gene055513:intron 25.0%
!!! TATCATCCTTTTATTTCCTT+TGG - chr3.2:82393268-82393287 MS.gene055513:intron 25.0%
!!! TCTAGAGTTTGACTTTTTTT+GGG - chr3.2:82392689-82392708 MS.gene055513:CDS 25.0%
!!! TGATTTTGGTTATTTTTCCA+GGG - chr3.2:82390317-82390336 MS.gene055513:intron 25.0%
!!! TTCTAGAGTTTGACTTTTTT+TGG - chr3.2:82392688-82392707 MS.gene055513:CDS 25.0%
!!! TTGATTTTGGTTATTTTTCC+AGG - chr3.2:82390316-82390335 MS.gene055513:intron 25.0%
!!! TTGCTTTTATGTTAACAGAA+AGG - chr3.2:82392450-82392469 MS.gene055513:CDS 25.0%
AAAAAGCAAACTTCAGAATC+TGG - chr3.2:82393395-82393414 MS.gene055513:intron 30.0%
AAAGGAAAAGCAAGATACTA+AGG - chr3.2:82393784-82393803 MS.gene055513:intron 30.0%
AAGCGTGACTTATAATTCTA+GGG - chr3.2:82391147-82391166 MS.gene055513:CDS 30.0%
AAGGAAAAGCAAGATACTAA+GGG - chr3.2:82393785-82393804 MS.gene055513:intron 30.0%
AATCCTCCAAAGGAAATAAA+AGG + chr3.2:82393277-82393296 None:intergenic 30.0%
ACAAAAGGTTGCTTATATGT+TGG + chr3.2:82391263-82391282 None:intergenic 30.0%
ACTGAATTGTTGTCAAATCT+AGG + chr3.2:82390835-82390854 None:intergenic 30.0%
AGACTTCAATGCTTAATCTA+GGG - chr3.2:82393902-82393921 MS.gene055513:intron 30.0%
AGTTGTAGTTGAGATTCTTA+AGG - chr3.2:82394196-82394215 MS.gene055513:intron 30.0%
ATAAAATTTCTTCCTTCAGG+GGG - chr3.2:82394373-82394392 MS.gene055513:intron 30.0%
ATGCTCCATAATATACTGTT+TGG - chr3.2:82391556-82391575 MS.gene055513:intron 30.0%
CAAGATACAAAAAACTGGAA+AGG - chr3.2:82393766-82393785 MS.gene055513:intron 30.0%
CAAGATCATCAAACATAAAG+AGG + chr3.2:82393874-82393893 None:intergenic 30.0%
CAGTGTTTCAATAACCAAAA+TGG + chr3.2:82391384-82391403 None:intergenic 30.0%
CTGAATTGTTGTCAAATCTA+GGG + chr3.2:82390834-82390853 None:intergenic 30.0%
CTGATAAAATTTCTTCCTTC+AGG - chr3.2:82394370-82394389 MS.gene055513:intron 30.0%
GAAGATATCGTGTGAATTTA+GGG - chr3.2:82390417-82390436 MS.gene055513:CDS 30.0%
GAATAACAAAAAATTAGGGG+GGG + chr3.2:82394000-82394019 None:intergenic 30.0%
GAATTATAAGTCACGCTTAT+TGG + chr3.2:82391145-82391164 None:intergenic 30.0%
GATAAAATTTCTTCCTTCAG+GGG - chr3.2:82394372-82394391 MS.gene055513:intron 30.0%
GGCAAACAAAAATAAACATG+TGG + chr3.2:82391306-82391325 None:intergenic 30.0%
TAAAAGTAGTAAGAAGACCA+AGG - chr3.2:82394145-82394164 MS.gene055513:intron 30.0%
TAAACAAGACTTCCAAATAC+TGG + chr3.2:82390988-82391007 None:intergenic 30.0%
TAAGCGTGACTTATAATTCT+AGG - chr3.2:82391146-82391165 MS.gene055513:CDS 30.0%
TACTTCCAAAAAATCTGTGA+AGG - chr3.2:82393583-82393602 MS.gene055513:intron 30.0%
TAGACTTCAATGCTTAATCT+AGG - chr3.2:82393901-82393920 MS.gene055513:intron 30.0%
TAGATATGAATCTTTGTGAG+GGG - chr3.2:82391782-82391801 MS.gene055513:intron 30.0%
TCATCAATCAGTTAAGACAA+AGG + chr3.2:82392301-82392320 None:intergenic 30.0%
TCTTCCCAAACAGTATATTA+TGG + chr3.2:82391564-82391583 None:intergenic 30.0%
TGAAGATATCGTGTGAATTT+AGG - chr3.2:82390416-82390435 MS.gene055513:CDS 30.0%
TGACAAGTATTATGCATGTA+CGG + chr3.2:82391327-82391346 None:intergenic 30.0%
TGCAGAAAATAGAATCTTGT+GGG - chr3.2:82394641-82394660 MS.gene055513:CDS 30.0%
TGCTCAAAAGTAACTATGTA+AGG + chr3.2:82390388-82390407 None:intergenic 30.0%
TGCTCCATAATATACTGTTT+GGG - chr3.2:82391557-82391576 MS.gene055513:intron 30.0%
TGTTATGTGTATGGTATTAG+TGG - chr3.2:82391425-82391444 MS.gene055513:intron 30.0%
TTATGTGCAAACTATTTCAG+TGG - chr3.2:82391492-82391511 MS.gene055513:intron 30.0%
TTCAATTATCAGTCCTTTAC+TGG + chr3.2:82390229-82390248 None:intergenic 30.0%
TTCATCATCATCATCTTTCT+CGG + chr3.2:82390013-82390032 None:intergenic 30.0%
TTTAATGCATAGAAAAGCAG+AGG - chr3.2:82394459-82394478 MS.gene055513:CDS 30.0%
! AAAGATGATGATGATGAAGA+TGG - chr3.2:82390015-82390034 MS.gene055513:intron 30.0%
! AAAGCTTTGGTAGGTATATT+TGG - chr3.2:82394718-82394737 MS.gene055513:CDS 30.0%
! AAATAATGGAAGTGATAACG+AGG - chr3.2:82393514-82393533 MS.gene055513:intron 30.0%
! ATCTGTTACTTGTAATATGC+TGG - chr3.2:82393018-82393037 MS.gene055513:intron 30.0%
! ATGTTGACAGGTAAACATTT+TGG - chr3.2:82394430-82394449 MS.gene055513:CDS 30.0%
! CTGAAGGAAGAAATTTTATC+AGG + chr3.2:82394372-82394391 None:intergenic 30.0%
! CTTTTACCTTTACCTACAAT+TGG + chr3.2:82394131-82394150 None:intergenic 30.0%
! GGTTCTAATTAAAGTCAATC+AGG + chr3.2:82393173-82393192 None:intergenic 30.0%
! TAGAGCATCTATCATAGAAA+AGG + chr3.2:82394758-82394777 None:intergenic 30.0%
! TGATTTGGATAGTTGTATTG+TGG - chr3.2:82392774-82392793 MS.gene055513:intron 30.0%
! TTCAAGTACCACTTCTAAAA+TGG - chr3.2:82392050-82392069 MS.gene055513:intron 30.0%
! TTCACACTACTCTTGTTTAT+TGG + chr3.2:82391990-82392009 None:intergenic 30.0%
! TTCTCATTGTTGCCTTTTTA+TGG + chr3.2:82392963-82392982 None:intergenic 30.0%
!! GACATCTGTCTTTTTCATTA+TGG - chr3.2:82390893-82390912 MS.gene055513:CDS 30.0%
!! TAACAAAACATGTTTTCAGG+AGG - chr3.2:82392086-82392105 MS.gene055513:intron 30.0%
!! TATTTTGAATGTCTTGATGC+AGG - chr3.2:82394303-82394322 MS.gene055513:intron 30.0%
!! TTAAGCATTGAAGTCTATAG+AGG + chr3.2:82393898-82393917 None:intergenic 30.0%
!!! CTTTCCAGTTTTTTGTATCT+TGG + chr3.2:82393768-82393787 None:intergenic 30.0%
!!! TCTCTCAATTTTGGTTTTTG+AGG - chr3.2:82390270-82390289 MS.gene055513:intron 30.0%
AAAAAAGTCAATTACCGAGC+AGG - chr3.2:82393706-82393725 MS.gene055513:intron 35.0%
AAAACAGAGAACAAGGGTAA+AGG - chr3.2:82391905-82391924 MS.gene055513:intron 35.0%
AAACAAGAGTAGTGTGAAGA+AGG - chr3.2:82391992-82392011 MS.gene055513:intron 35.0%
AAAGCAAGATACTAAGGGAA+AGG - chr3.2:82393790-82393809 MS.gene055513:intron 35.0%
AAGTGGTACTTGAATTCCTT+TGG + chr3.2:82392044-82392063 None:intergenic 35.0%
AATGTCAGAACCTGATTGAA+AGG - chr3.2:82392599-82392618 MS.gene055513:intron 35.0%
ACAAATATGTGTCACCAGTA+TGG + chr3.2:82390578-82390597 None:intergenic 35.0%
ACATCTTCACAATTATTGGC+AGG - chr3.2:82391881-82391900 MS.gene055513:intron 35.0%
ACTGTTTGGGAAGAAAACAA+AGG - chr3.2:82391570-82391589 MS.gene055513:intron 35.0%
AGCGTGACTTATAATTCTAG+GGG - chr3.2:82391148-82391167 MS.gene055513:CDS 35.0%
AGGCAATTAGACATACCATT+AGG + chr3.2:82390368-82390387 None:intergenic 35.0%
ATACTCACATGACCAGTATT+TGG - chr3.2:82390973-82390992 MS.gene055513:CDS 35.0%
ATCACCATCACAACATTGAA+AGG + chr3.2:82392758-82392777 None:intergenic 35.0%
ATTGCAGCTGTTAAGAACAA+TGG - chr3.2:82391072-82391091 MS.gene055513:CDS 35.0%
CAATAACCAAAATGGTATGG+CGG + chr3.2:82391376-82391395 None:intergenic 35.0%
CTGCAGAAAATAGAATCTTG+TGG - chr3.2:82394640-82394659 MS.gene055513:CDS 35.0%
GACTTCAATGCTTAATCTAG+GGG - chr3.2:82393903-82393922 MS.gene055513:intron 35.0%
GCAAATTAATATCAGCCACA+AGG + chr3.2:82391851-82391870 None:intergenic 35.0%
GCAACCAAGATACAAAAAAC+TGG - chr3.2:82393761-82393780 MS.gene055513:intron 35.0%
GTATATTATGGAGCATATGC+AGG + chr3.2:82391552-82391571 None:intergenic 35.0%
GTCAGGTTAACAATCTAAAG+AGG - chr3.2:82391675-82391694 MS.gene055513:intron 35.0%
GTCTGTTTGTGTTTGTTCAT+TGG - chr3.2:82390449-82390468 MS.gene055513:CDS 35.0%
GTTACTTCAACTTCTTCTTC+TGG + chr3.2:82389928-82389947 None:intergenic 35.0%
GTTACTTGTAATATGCTGGT+TGG - chr3.2:82393022-82393041 MS.gene055513:intron 35.0%
TACATAACAATAGTGCACTG+CGG + chr3.2:82392573-82392592 None:intergenic 35.0%
TCACTTATTTCACACACACT+AGG + chr3.2:82393323-82393342 None:intergenic 35.0%
TCAGAAAGAACTAAGTAAGC+AGG + chr3.2:82394106-82394125 None:intergenic 35.0%
TCATAACAGAAATCCTCCAA+AGG + chr3.2:82393287-82393306 None:intergenic 35.0%
TCCAAAAAATCTGTGAAGGA+GGG - chr3.2:82393587-82393606 MS.gene055513:intron 35.0%
TCTTCTTGCTGAAAAAGAAC+AGG - chr3.2:82392164-82392183 MS.gene055513:intron 35.0%
TGAACTGAAAATCTGAGTCT+AGG + chr3.2:82390924-82390943 None:intergenic 35.0%
TGCAACATCTTCATCTTCTT+GGG + chr3.2:82393489-82393508 None:intergenic 35.0%
TGTATTGTGGATTTCTTACC+TGG - chr3.2:82392787-82392806 MS.gene055513:intron 35.0%
TTACTCTTCATCTTCATCAC+TGG + chr3.2:82394599-82394618 None:intergenic 35.0%
TTCACATGCATACATCTGTA+GGG - chr3.2:82390864-82390883 MS.gene055513:CDS 35.0%
TTCCAAAAAATCTGTGAAGG+AGG - chr3.2:82393586-82393605 MS.gene055513:intron 35.0%
TTCTTTCTGATGCCAATTGT+AGG - chr3.2:82394116-82394135 MS.gene055513:intron 35.0%
TTTCACATGCATACATCTGT+AGG - chr3.2:82390863-82390882 MS.gene055513:CDS 35.0%
! ACATGTGGGCTATAAGTAAT+TGG + chr3.2:82391291-82391310 None:intergenic 35.0%
! GATTTCTTACCTGGTTTGTA+AGG - chr3.2:82392796-82392815 MS.gene055513:intron 35.0%
! TATCTAATTGACTCTACCTG+TGG - chr3.2:82391178-82391197 MS.gene055513:CDS 35.0%
! TCAATGTTGTGATGGTGATT+TGG - chr3.2:82392759-82392778 MS.gene055513:intron 35.0%
! TTCAACTTCTTCTTCTGGTT+TGG + chr3.2:82389923-82389942 None:intergenic 35.0%
! TTTTATGACCATAAGTCCAC+AGG + chr3.2:82391197-82391216 None:intergenic 35.0%
! TTTTCCTATGTTACACGCAT+AGG - chr3.2:82391017-82391036 MS.gene055513:CDS 35.0%
!! CATCCTTTTATTTCCTTTGG+AGG - chr3.2:82393271-82393290 MS.gene055513:intron 35.0%
!! TCAACTTCTTCTTCTGGTTT+GGG + chr3.2:82389922-82389941 None:intergenic 35.0%
!! TTGGAAGTCTTGTTTACATC+TGG - chr3.2:82390992-82391011 MS.gene055513:CDS 35.0%
!! TTTACAGAAAGTGTCATCCA+AGG + chr3.2:82392924-82392943 None:intergenic 35.0%
!!! CTGAAGTTTGCTTTTTCTTC+TGG + chr3.2:82393391-82393410 None:intergenic 35.0%
!!! GTTTTCGACTTGTTTTGGTT+TGG + chr3.2:82389884-82389903 None:intergenic 35.0%
!!! GTTTTTTGTATCTTGGTTGC+AGG + chr3.2:82393761-82393780 None:intergenic 35.0%
!!! TGCTCGGTAATTGACTTTTT+TGG + chr3.2:82393707-82393726 None:intergenic 35.0%
!!! TGGAGTTTTTTCACTGCTTT+TGG + chr3.2:82393672-82393691 None:intergenic 35.0%
!!! TTTTGGTTTGGTATCGTCTA+GGG + chr3.2:82389872-82389891 None:intergenic 35.0%
AAAGCCTTCTGATGTTGAAG+AGG - chr3.2:82393427-82393446 MS.gene055513:intron 40.0%
AACATCAGTAGTAGCATGTG+GGG + chr3.2:82392145-82392164 None:intergenic 40.0%
ACATGATGATCTGATCCTTG+TGG - chr3.2:82391833-82391852 MS.gene055513:intron 40.0%
AGAACATCAGTAGTAGCATG+TGG + chr3.2:82392147-82392166 None:intergenic 40.0%
AGAAGATGAAGATGTTGCAG+TGG - chr3.2:82393490-82393509 MS.gene055513:intron 40.0%
AGAGGTCTTCTTAACAGATG+TGG + chr3.2:82393639-82393658 None:intergenic 40.0%
ATGTCTGATGAGGAAGATGA+AGG - chr3.2:82394514-82394533 MS.gene055513:CDS 40.0%
ATTGTGCTTGATCACGACTT+TGG - chr3.2:82392714-82392733 MS.gene055513:intron 40.0%
CAAGAAATTATTCCCCCTGA+AGG + chr3.2:82394388-82394407 None:intergenic 40.0%
CAGCTCAAGGATATTCCTAA+TGG - chr3.2:82390350-82390369 MS.gene055513:intron 40.0%
CAGTTCAGCATGACAACTAA+AGG + chr3.2:82393966-82393985 None:intergenic 40.0%
CTGATGCCAATTGTAGGTAA+AGG - chr3.2:82394122-82394141 MS.gene055513:intron 40.0%
CTGCAACATCTTCATCTTCT+TGG + chr3.2:82393490-82393509 None:intergenic 40.0%
GAACATCAGTAGTAGCATGT+GGG + chr3.2:82392146-82392165 None:intergenic 40.0%
GACACCTTTCAATGTTGTGA+TGG - chr3.2:82392751-82392770 MS.gene055513:intron 40.0%
GATGTTGCAGTGGCAAATAA+TGG - chr3.2:82393500-82393519 MS.gene055513:intron 40.0%
GATTGTTAACCTGACCATTC+AGG + chr3.2:82391670-82391689 None:intergenic 40.0%
GCAATTCATTACCAGTTTGC+AGG - chr3.2:82394253-82394272 MS.gene055513:intron 40.0%
GCAGGAAAAACAGAGAACAA+GGG - chr3.2:82391899-82391918 MS.gene055513:intron 40.0%
GCGTGACTTATAATTCTAGG+GGG - chr3.2:82391149-82391168 MS.gene055513:CDS 40.0%
GGAAAAAGATCGTACCAAGT+TGG + chr3.2:82394351-82394370 None:intergenic 40.0%
TAAGAAGCTGCAGAAAGAAC+TGG + chr3.2:82393230-82393249 None:intergenic 40.0%
TCATCCTCTTCAACATCAGA+AGG + chr3.2:82393434-82393453 None:intergenic 40.0%
TCTCCTGTTAGCTGTCTATA+CGG - chr3.2:82394692-82394711 MS.gene055513:CDS 40.0%
TGAACTTGACCTTACAAACC+AGG + chr3.2:82392808-82392827 None:intergenic 40.0%
TGAAGTAACTGAACAAGACG+CGG - chr3.2:82389939-82389958 MS.gene055513:intron 40.0%
TGACCATTCAGGAATAGCAA+AGG + chr3.2:82391659-82391678 None:intergenic 40.0%
TGCAAAGCTGTTGGAATTTC+TGG - chr3.2:82392116-82392135 MS.gene055513:CDS 40.0%
TTGACGTGTTTGTGTTGTGT+CGG - chr3.2:82390669-82390688 MS.gene055513:intron 40.0%
TTGCATCAGAAAGTTCAGCT+TGG + chr3.2:82393457-82393476 None:intergenic 40.0%
! AAAAGATCGTACCAAGTTGG+CGG + chr3.2:82394348-82394367 None:intergenic 40.0%
! AATGGAAGTGATAACGAGGT+GGG - chr3.2:82393518-82393537 MS.gene055513:intron 40.0%
! AGGAATATAGGCCAGTTTTC+TGG - chr3.2:82391695-82391714 MS.gene055513:intron 40.0%
! ATACGGGTTAAAGCTTTGGT+AGG - chr3.2:82394709-82394728 MS.gene055513:CDS 40.0%
! CTTTTGGCGTGTTATGTGTA+TGG - chr3.2:82391416-82391435 MS.gene055513:intron 40.0%
! GTACTTGTTACTCTACTGGT+TGG - chr3.2:82393925-82393944 MS.gene055513:intron 40.0%
! GTCTATACGGGTTAAAGCTT+TGG - chr3.2:82394705-82394724 MS.gene055513:CDS 40.0%
! GTGATGTATTTGAGGCTGAA+TGG + chr3.2:82392870-82392889 None:intergenic 40.0%
! TAATGGAAGTGATAACGAGG+TGG - chr3.2:82393517-82393536 MS.gene055513:intron 40.0%
! TGTGGATTTAGCTTCAGCTT+TGG + chr3.2:82393621-82393640 None:intergenic 40.0%
! TGTTGTGTCGGTGCTTTAAA+GGG - chr3.2:82390681-82390700 MS.gene055513:intron 40.0%
! TTATGTGTGGGCTGAAAATG+AGG - chr3.2:82391718-82391737 MS.gene055513:intron 40.0%
! TTTGGTATCGTCTAGGGTTT+CGG + chr3.2:82389866-82389885 None:intergenic 40.0%
! TTTTGTCCGCCATACCATTT+TGG - chr3.2:82391367-82391386 MS.gene055513:intron 40.0%
!! ACACCTTTGCTATTCCTGAA+TGG - chr3.2:82391653-82391672 MS.gene055513:intron 40.0%
!! GAAGTACTCTTGTGAGCTTT+TGG + chr3.2:82393569-82393588 None:intergenic 40.0%
!! GCTTCGTTTTCGACTTGTTT+TGG + chr3.2:82389889-82389908 None:intergenic 40.0%
!! TTCTGGTTTGGGTTCATCTT+TGG + chr3.2:82389911-82389930 None:intergenic 40.0%
!! TTTGCTATTCCTGAATGGTC+AGG - chr3.2:82391658-82391677 MS.gene055513:intron 40.0%
!!! ACCCTCCTTCACAGATTTTT+TGG + chr3.2:82393591-82393610 None:intergenic 40.0%
!!! CCAGTTTTCTGGTTATGTGT+GGG - chr3.2:82391706-82391725 MS.gene055513:intron 40.0%
!!! GTTTTGGTTTGGTATCGTCT+AGG + chr3.2:82389873-82389892 None:intergenic 40.0%
AAAATTAGGGGGGGACAAAC+AGG + chr3.2:82393991-82394010 None:intergenic 45.0%
AACCCGTATAGACAGCTAAC+AGG + chr3.2:82394698-82394717 None:intergenic 45.0%
AACGAGGTGGGTAAATCAGA+GGG - chr3.2:82393530-82393549 MS.gene055513:intron 45.0%
AAGAGAAGCAGAATCCTGCT+CGG + chr3.2:82393723-82393742 None:intergenic 45.0%
AAGCAAAACTGCAAAGGCTG+CGG - chr3.2:82393817-82393836 MS.gene055513:intron 45.0%
AAGTGTCATCCAAGGCAGAA+TGG + chr3.2:82392916-82392935 None:intergenic 45.0%
ACCTTTGCAAGTGTTTCTCC+AGG + chr3.2:82392513-82392532 None:intergenic 45.0%
AGAGAACAAGGGTAAAGGAG+AGG - chr3.2:82391910-82391929 MS.gene055513:intron 45.0%
CCCACACATAACCAGAAAAC+TGG + chr3.2:82391709-82391728 None:intergenic 45.0%
CTCCTGTTAGCTGTCTATAC+GGG - chr3.2:82394693-82394712 MS.gene055513:CDS 45.0%
CTTCACCTTCGAAGTTTGGA+AGG - chr3.2:82390196-82390215 MS.gene055513:intron 45.0%
CTTCCAAACTTCGAAGGTGA+AGG + chr3.2:82390198-82390217 None:intergenic 45.0%
GAACCTTCACCTTCGAAGTT+TGG - chr3.2:82390192-82390211 MS.gene055513:intron 45.0%
GAAGACCTTCCAAACTTCGA+AGG + chr3.2:82390204-82390223 None:intergenic 45.0%
GAAGATGCTGGTGAGAAGAA+GGG - chr3.2:82390075-82390094 MS.gene055513:intron 45.0%
GATGTCGATGCGGGTAAAAA+TGG - chr3.2:82394568-82394587 MS.gene055513:CDS 45.0%
GCATAGAAAAGCAGAGGTGA+AGG - chr3.2:82394465-82394484 MS.gene055513:CDS 45.0%
GGAAGGTCTTCTTCCAGTAA+AGG - chr3.2:82390213-82390232 MS.gene055513:intron 45.0%
GGCAGGAAAAACAGAGAACA+AGG - chr3.2:82391898-82391917 MS.gene055513:intron 45.0%
TAACGAGGTGGGTAAATCAG+AGG - chr3.2:82393529-82393548 MS.gene055513:intron 45.0%
TCATCCAAGGCAGAATGGTT+GGG + chr3.2:82392911-82392930 None:intergenic 45.0%
TCCTGGAGAAACACTTGCAA+AGG - chr3.2:82392509-82392528 MS.gene055513:CDS 45.0%
TGACTCTACCTGTGGACTTA+TGG - chr3.2:82391186-82391205 MS.gene055513:CDS 45.0%
TGATGAGGAAGATGAAGGTG+AGG - chr3.2:82394519-82394538 MS.gene055513:CDS 45.0%
TGTGCCTATGCGTGTAACAT+AGG + chr3.2:82391024-82391043 None:intergenic 45.0%
! AAGCTGATAGTGATGGCGAT+GGG - chr3.2:82394545-82394564 MS.gene055513:CDS 45.0%
! GAGGAAGAAGCTGATAGTGA+TGG - chr3.2:82394538-82394557 MS.gene055513:CDS 45.0%
! GTGTTGTGTCGGTGCTTTAA+AGG - chr3.2:82390680-82390699 MS.gene055513:intron 45.0%
!! AGGGGTACTTGTTACTCTAC+TGG - chr3.2:82393921-82393940 MS.gene055513:intron 45.0%
!! TCAGGAATAGCAAAGGTGTC+AGG + chr3.2:82391652-82391671 None:intergenic 45.0%
!! TTCTCCAGGAGATTTGCTAG+AGG + chr3.2:82392499-82392518 None:intergenic 45.0%
!!! GCCAGTTTTCTGGTTATGTG+TGG - chr3.2:82391705-82391724 MS.gene055513:intron 45.0%
!!! TGGTTATTTTTCCAGGGACG+TGG - chr3.2:82390323-82390342 MS.gene055513:intron 45.0%
!!! ATATTTTTCTTTTTTAAATA+TGG - chr3.2:82394058-82394077 MS.gene055513:intron 5.0%
AACTAGGGAAAGGAAGACGG+TGG - chr3.2:82390158-82390177 MS.gene055513:CDS 50.0%
AACTGCAAAGGCTGCGGTTA+AGG - chr3.2:82393823-82393842 MS.gene055513:intron 50.0%
AAGGCTGCGGTTAAGGATCA+AGG - chr3.2:82393830-82393849 MS.gene055513:intron 50.0%
ACCGTCTTCCTTTCCCTAGT+TGG + chr3.2:82390159-82390178 None:intergenic 50.0%
AGCATATGCAGGTTGTCGTC+AGG + chr3.2:82391541-82391560 None:intergenic 50.0%
CCACGTGCAACCTTTCAATC+AGG + chr3.2:82392612-82392631 None:intergenic 50.0%
CCTGATTGAAAGGTTGCACG+TGG - chr3.2:82392609-82392628 MS.gene055513:intron 50.0%
CTATCACTCGTCGGAGTAAC+CGG + chr3.2:82390135-82390154 None:intergenic 50.0%
GACGAGTGATAGGCCAACTA+GGG - chr3.2:82390143-82390162 MS.gene055513:CDS 50.0%
GCAACCTCTAGCAAATCTCC+TGG - chr3.2:82392492-82392511 MS.gene055513:CDS 50.0%
GCCAACTAGGGAAAGGAAGA+CGG - chr3.2:82390155-82390174 MS.gene055513:CDS 50.0%
GGAACTGTCTGCAAAGCTGT+TGG - chr3.2:82392107-82392126 MS.gene055513:CDS 50.0%
GGAAGATGCTGGTGAGAAGA+AGG - chr3.2:82390074-82390093 MS.gene055513:intron 50.0%
GGCTGCAAGCAAAACTGCAA+AGG - chr3.2:82393811-82393830 MS.gene055513:intron 50.0%
GTCATCCAAGGCAGAATGGT+TGG + chr3.2:82392912-82392931 None:intergenic 50.0%
GTCGTCAGAGAAGAAGAGTC+CGG - chr3.2:82390113-82390132 MS.gene055513:intron 50.0%
GTGATAGGCCAACTAGGGAA+AGG - chr3.2:82390148-82390167 MS.gene055513:CDS 50.0%
TACTCCCAACCATTCTGCCT+TGG - chr3.2:82392904-82392923 MS.gene055513:CDS 50.0%
TGTCACCAGTATGGCGAGTT+CGG + chr3.2:82390569-82390588 None:intergenic 50.0%
TGTGATATCCTCCGCCAACT+TGG - chr3.2:82394334-82394353 MS.gene055513:intron 50.0%
! AGCTGATAGTGATGGCGATG+GGG - chr3.2:82394546-82394565 MS.gene055513:CDS 50.0%
! CGATGCTGATGCTGATGATG+AGG - chr3.2:82390047-82390066 MS.gene055513:intron 50.0%
! CTAGTTGGCCTATCACTCGT+CGG + chr3.2:82390144-82390163 None:intergenic 50.0%
! GAAGCTGATAGTGATGGCGA+TGG - chr3.2:82394544-82394563 MS.gene055513:CDS 50.0%
! GCTTTTGGCAGCTTTTGCAG+AGG + chr3.2:82393657-82393676 None:intergenic 50.0%
! TGATGCTGATGATGAGGAGG+AGG - chr3.2:82390053-82390072 MS.gene055513:intron 50.0%
! TGCTGATGCTGATGATGAGG+AGG - chr3.2:82390050-82390069 MS.gene055513:intron 50.0%
!! AGTTCGGTGTGTGACACGTT+GGG + chr3.2:82390553-82390572 None:intergenic 50.0%
!! GGTTGCAGGTTGATCTGACT+TGG + chr3.2:82393747-82393766 None:intergenic 50.0%
ACACACCGAACTCGCCATAC+TGG - chr3.2:82390561-82390580 MS.gene055513:intron 55.0%
AGACCAAGGTAGAGCCGAGT+AGG - chr3.2:82394159-82394178 MS.gene055513:intron 55.0%
CGACGAGTGATAGGCCAACT+AGG - chr3.2:82390142-82390161 MS.gene055513:CDS 55.0%
CGGTTACTCCGACGAGTGAT+AGG - chr3.2:82390133-82390152 MS.gene055513:CDS 55.0%
GATGAGGAGGAGGAAGATGC+TGG - chr3.2:82390063-82390082 MS.gene055513:intron 55.0%
GGTGGGTAAATCAGAGGGAG+AGG - chr3.2:82393535-82393554 MS.gene055513:intron 55.0%
! AGATCGTACCAAGTTGGCGG+AGG + chr3.2:82394345-82394364 None:intergenic 55.0%
!! GAGTTCGGTGTGTGACACGT+TGG + chr3.2:82390554-82390573 None:intergenic 55.0%
!! GTTCGGTGTGTGACACGTTG+GGG + chr3.2:82390552-82390571 None:intergenic 55.0%
CAAGGTAGAGCCGAGTAGGC+AGG - chr3.2:82394163-82394182 MS.gene055513:intron 60.0%
CTGCCTACTCGGCTCTACCT+TGG + chr3.2:82394165-82394184 None:intergenic 60.0%
GCGTGCATGTCCTGCCTACT+CGG + chr3.2:82394176-82394195 None:intergenic 60.0%
GGGACGTGGTACTCAGCTCA+AGG - chr3.2:82390337-82390356 MS.gene055513:intron 60.0%
TGAGCTGAGTACCACGTCCC+TGG + chr3.2:82390337-82390356 None:intergenic 60.0%
TGGCGATGGGGATGTCGATG+CGG - chr3.2:82394558-82394577 MS.gene055513:CDS 60.0%
GGCGATGGGGATGTCGATGC+GGG - chr3.2:82394559-82394578 MS.gene055513:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 82389856 82394778 82389856 ID=MS.gene055513
chr3.2 mRNA 82389856 82394778 82389856 ID=MS.gene055513.t1;Parent=MS.gene055513
chr3.2 exon 82394383 82394778 82394383 ID=MS.gene055513.t1.exon1;Parent=MS.gene055513.t1
chr3.2 CDS 82394383 82394778 82394383 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82394263 82394296 82394263 ID=MS.gene055513.t1.exon2;Parent=MS.gene055513.t1
chr3.2 CDS 82394263 82394296 82394263 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82393043 82393122 82393043 ID=MS.gene055513.t1.exon3;Parent=MS.gene055513.t1
chr3.2 CDS 82393043 82393122 82393043 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82392895 82392954 82392895 ID=MS.gene055513.t1.exon4;Parent=MS.gene055513.t1
chr3.2 CDS 82392895 82392954 82392895 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82392621 82392731 82392621 ID=MS.gene055513.t1.exon5;Parent=MS.gene055513.t1
chr3.2 CDS 82392621 82392731 82392621 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82392449 82392529 82392449 ID=MS.gene055513.t1.exon6;Parent=MS.gene055513.t1
chr3.2 CDS 82392449 82392529 82392449 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82392104 82392166 82392104 ID=MS.gene055513.t1.exon7;Parent=MS.gene055513.t1
chr3.2 CDS 82392104 82392166 82392104 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82390783 82391242 82390783 ID=MS.gene055513.t1.exon8;Parent=MS.gene055513.t1
chr3.2 CDS 82390783 82391242 82390783 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82390399 82390496 82390399 ID=MS.gene055513.t1.exon9;Parent=MS.gene055513.t1
chr3.2 CDS 82390399 82390496 82390399 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82390279 82390309 82390279 ID=MS.gene055513.t1.exon10;Parent=MS.gene055513.t1
chr3.2 CDS 82390279 82390309 82390279 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82390133 82390194 82390133 ID=MS.gene055513.t1.exon11;Parent=MS.gene055513.t1
chr3.2 CDS 82390133 82390194 82390133 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
chr3.2 exon 82389856 82389864 82389856 ID=MS.gene055513.t1.exon12;Parent=MS.gene055513.t1
chr3.2 CDS 82389856 82389864 82389856 ID=cds.MS.gene055513.t1;Parent=MS.gene055513.t1
Gene Sequence

>MS.gene055513

ATGGCTACCGAAACCCTAGACGATACCAAACCAAAACAAGTCGAAAACGAAGCCAAAGATGAACCCAAACCAGAAGAAGAAGTTGAAGTAACTGAACAAGACGCGGAAATTGCTGAATCTGATGAGAAGAAAGAGATCGATGAACATGAAGATTCCGAGAAAGATGATGATGATGAAGATGGAGACGAAGACGATGCTGATGCTGATGATGAGGAGGAGGAAGATGCTGGTGAGAAGAAGGGTGTGAAGAAAGAAGCGTCGTCAGAGAAGAAGAGTCCGGTTACTCCGACGAGTGATAGGCCAACTAGGGAAAGGAAGACGGTGGAGCGATACTCTGAACCTTCACCTTCGAAGTTTGGAAGGTCTTCTTCCAGTAAAGGACTGATAATTGAAAAGGTATGTATACATTTTTTCTCTCTCAATTTTGGTTTTTGAGGTATGAAGTGTGTTTTTGATTAATTTGATTTTGGTTATTTTTCCAGGGACGTGGTACTCAGCTCAAGGATATTCCTAATGGTATGTCTAATTGCCTTACATAGTTACTTTTGAGCAAATTTTGTTGAAGATATCGTGTGAATTTAGGGATCATGTGTGTCTGTTTGTGTTTGTTCATTGGAATTGAAATATAGTTGATCTAGATCTCCTTTTTCTTTTTTTTTTTGCATTTCCTATATGGATGATTTTAATTGTAATCCCCAACGTGTCACACACCGAACTCGCCATACTGGTGACACATATTTGTGTTTGATACTGACACCAACATATGTGATTATGTTCAATTATTTCATTTTTTTTCTCAATTTTTTATCGGTGTTGACGTGTTTGTGTTGTGTCGGTGCTTTAAAGGGTTTTAACAATTTTGCATTTTTGAGTGCTGCTGCGTGTTACTTCTAGATCACTGTTTTTGTCTCTCTGTTTTGTATTTTCTTTTACAATATGTTTTTTTACTAATTGTATATTTCATTAGCAAGACTGCCCTAGATTTGACAACAATTCAGTTATTTTAATTTCACATGCATACATCTGTAGGGTTTTTAGACATCTGTCTTTTTCATTATGGTATTTCCTAGACTCAGATTTTCAGTTCATGTTGATCTGACATGAAAGCAACAATAACATACTCACATGACCAGTATTTGGAAGTCTTGTTTACATCTGGCGTTTTCCTATGTTACACGCATAGGCACAAAATTTATAGTTGATTGAAGTATCATGGATTGCAGCTGTTAAGAACAATGGATCTCAAACTTGTGCATTTTTATGAATTACACACGAGAGTGTTTCACCCAATAAGCGTGACTTATAATTCTAGGGGGTTCTCATATCTAATTGACTCTACCTGTGGACTTATGGTCATAAAATTTTATTTCAAGATTGTTAGTTTTCTAGACGTATTTGCTTTCTCCAACATATAAGCAACCTTTTGTTGAAACCAATTACTTATAGCCCACATGTTTATTTTTGTTTGCCGTACATGCATAATACTTGTCAAGCTATTGTAAAATTAACTTTTTTGTCCGCCATACCATTTTGGTTATTGAAACACTGACTTTCATTAATCTTTTGGCGTGTTATGTGTATGGTATTAGTGGCAATAGATTTATTTTTATACTTTAGTGTTGTCTAATATAGTTATTTATGTGCAAACTATTTCAGTGGCTTTCAAGTTGTCAAAGAGAAAACCTGACGACAACCTGCATATGCTCCATAATATACTGTTTGGGAAGAAAACAAAGGTGATGTTGCTAACACCTTTGCAAAGATTTATTTCATTTATTTAAAGGTACAGTAATCCTGACACCTTTGCTATTCCTGAATGGTCAGGTTAACAATCTAAAGAGGAATATAGGCCAGTTTTCTGGTTATGTGTGGGCTGAAAATGAGGTACTTTTCTGTTATACTGTTCTTGTATTATATTCATAACAATAGATATGAATCTTTGTGAGGGGTTTTGTTTCATGTTATCTTTCATTAAAAACATGATGATCTGATCCTTGTGGCTGATATTAATTTGCAATTAAATCTACATCTTCACAATTATTGGCAGGAAAAACAGAGAACAAGGGTAAAGGAGAGGATTGACAAATGTGTGAAAGAAAAATTGATTGTCTTCTGCGATGTTCTTAATATTCCAATAAACAAGAGTAGTGTGAAGAAGGTACACATTCATATATCATTTTTGAATCCAAAGGAATTCAAGTACCACTTCTAAAATGGAAAATAAATTTTCTAACAAAACATGTTTTCAGGAGGAACTGTCTGCAAAGCTGTTGGAATTTCTGGAGTCCCCACATGCTACTACTGATGTTCTTCTTGCTGAAAAAGAACAGGTTTGTTATTTAATATAAATGGGTTAATATCATTTGGCACTTTTGTTTGCCGTAAACAATGTATAATTTATTGTGAAAAGAAAGCAAATATTCTACATCATTGAGTATCATTCCTTTGTCTTAACTGATTGATGAAGTGCACACCAGACAAATAATCTTTTTTATTGGAATTTTGAACTTGATTCTGTCTCATGTATTTAGAACTTTGTATTTATTTGTTACATATATAATTATTATTTTTCATGCTATTAGTTTTTTTGAAGTTTGCTTTTATGTTAACAGAAAGGTAAGAAGCGAGTTAGAAAAGCAACCTCTAGCAAATCTCCTGGAGAAACACTTGCAAAGGTATTGTCTTTATTTTATTCATTTTGGCTTGCTGTAAAACCGCAGTGCACTATTGTTATGTAATCTTTAATGTCAGAACCTGATTGAAAGGTTGCACGTGGTCATCTCGTTCTGATGATGATTTGATATTTTTTTAATTGCCAATTCTGAATATTTGTTCTAGAGTTTGACTTTTTTTGGGCAATTGTGCTTGATCACGACTTTGGTAAGTGTATAGTATGACACCTTTCAATGTTGTGATGGTGATTTGGATAGTTGTATTGTGGATTTCTTACCTGGTTTGTAAGGTCAAGTTCAATGTTGATAGTTTCTTTCTTTAATCAAACACTAATGATACCATTCAGCCTCAAATACATCACATATATTCTACAATTACTCCCAACCATTCTGCCTTGGATGACACTTTCTGTAAACCCATTCAAGATAGTTCCATAAAAAGGCAACAATGAGAAAACTTAATTAATGTTTGGTTAAATTTAATAATTTAATCTGTTACTTGTAATATGCTGGTTGGTTTTACTAACAAGTGTATTTTTTTGTTAAGTTAGTTGATTTGTGTTTGACTCATACCAATTTGTATGAAGATATCTTCATTTTCTTTTAAATTTTGTGTTTTGTAAAAATTAATACAAACTATTACCTGATTGACTTTAATTAGAACCCTGTTCATTTTAGCGAATAAATATTATACTATTACCAGTTCTTTCTGCAGCTTCTTACATTTCTTTCTTCAACTTTATCATCCTTTTATTTCCTTTGGAGGATTTCTGTTATGAATTTGTGTATTCTCCTAGTGTGTGTGAAATAAGTGATCTGCTTCAAATGTTTTTTTAATCAATTTTATGTTTTATCTTCATCCAGAAGAAAAAGCAAACTTCAGAATCTGGAAAAAAGCGAAAGCCTTCTGATGTTGAAGAGGATGACCAAGCTGAACTTTCTGATGCAAAAGATGAGTCCCAAGAAGATGAAGATGTTGCAGTGGCAAATAATGGAAGTGATAACGAGGTGGGTAAATCAGAGGGAGAGGAAGATACACCAAAAGCTCACAAGAGTACTTCCAAAAAATCTGTGAAGGAGGGTTCAGTTGCCAAAGCTGAAGCTAAATCCACATCTGTTAAGAAGACCTCTGCAAAAGCTGCCAAAAGCAGTGAAAAAACTCCAAAAAAATCAATACCAAAAAAGTCAATTACCGAGCAGGATTCTGCTTCTCTTTCCAAGTCAGATCAACCTGCAACCAAGATACAAAAAACTGGAAAGGAAAAGCAAGATACTAAGGGAAAGGCTGCAAGCAAAACTGCAAAGGCTGCGGTTAAGGATCAAGGTGCACTGATTACATTTTCCCTCTTTATGTTTGATGATCTTGTCCTCTATAGACTTCAATGCTTAATCTAGGGGTACTTGTTACTCTACTGGTTGGTCCACAGTTTTTAAACCTTTAGTTGTCATGCTGAACTGTTCCTGTTTGTCCCCCCCTAATTTTTTGTTATTCTGAACAAGTCACAAAAAACTAGATTAATTATTTAGATTATATTTTTCTTTTTTAAATATGGTTTTGTTGTTTTTAAATCTTATCCTGCTTACTTAGTTCTTTCTGATGCCAATTGTAGGTAAAGGTAAAAGTAGTAAGAAGACCAAGGTAGAGCCGAGTAGGCAGGACATGCACGCAGTTGTAGTTGAGATTCTTAAGGAAGTAGATTTCAATAAGGTGAGTAATATTTCTGTGCAATTCATTACCAGTTTGCAGGTTAAAATTTTTCTAATTTTACTTGTTATATTTTGAATGTCTTGATGCAGGCAACTTTGTGTGATATCCTCCGCCAACTTGGTACGATCTTTTTCCTGATAAAATTTCTTCCTTCAGGGGGAATAATTTCTTGAACTAAGTTATTTTGCAATTAAATGTTGACAGGTAAACATTTTGGCCTTGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATCATCACAGATGTAATTAATAATATGTCTGATGAGGAAGATGAAGGTGAGGAAGAAGCTGATAGTGATGGCGATGGGGATGTCGATGCGGGTAAAAATGGCGACGCCAGTGATGAAGATGAAGAGTAATTTTAGATTGAAAAATAGTTACTGCAGAAAATAGAATCTTGTGGGTCATCCCACAGCTAAATTTTATTTTCATTCTCCTGTTAGCTGTCTATACGGGTTAAAGCTTTGGTAGGTATATTTGGTTTGAGCTGTGTGACCTTTTCTATGATAGATGCTCTAA

Protein sequence

>MS.gene055513.t1

MATETLDDTKPKQVENEAKDEPKPEEEVEVTEQDAEIAESDEKKEIDEHEDSEKDDDDEDGDEDDADADDEEEEDAGEKKGVKKEASSEKKSPVTPTSDRPTRERKTVERYSEPSPSKFGRSSSSKGLIIEKGRGTQLKDIPNVAFKLSKRKPDDNLHMLHNILFGKKTKVNNLKRNIGQFSGYVWAENEEKQRTRVKERIDKCVKEKLIVFCDVLNIPINKSSVKKEELSAKLLEFLESPHATTDVLLAEKEQKGKKRVRKATSSKSPGETLAKKKKQTSESGKKRKPSDVEEDDQAELSDAKDESQEDEDVAVANNGSDNEVGKSEGEEDTPKAHKSTSKKSVKEGSVAKAEAKSTSVKKTSAKAAKSSEKTPKKSIPKKSITEQDSASLSKSDQPATKIQKTGKEKQDTKGKAASKTAKAAVKDQGKGKSSKKTKVEPSRQDMHAVVVEILKEVDFNKATLCDILRQLGKHFGLDLMHRKAEVKDIITDML