Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48520.t1 | XP_003602285.1 | 100 | 100 | 0 | 0 | 1 | 100 | 7 | 106 | 6.80E-54 | 219.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48520.t1 | Q9T096 | 84.0 | 100 | 16 | 0 | 1 | 100 | 7 | 106 | 1.2e-46 | 186.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48520.t1 | G7J7H5 | 100.0 | 100 | 0 | 0 | 1 | 100 | 7 | 106 | 4.9e-54 | 219.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057133 | MS.gene48520 | 0.812743 | 3.64E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 23 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGATGCCTGTCTTCTTT+TGG | 0.254022 | 3.2:+77324402 | None:intergenic |
| TGGTGATTGTCGTGAAGTGC+TGG | 0.372228 | 3.2:-77324346 | MS.gene48520:CDS |
| TTGGGTTACCTGAAAAGCCT+TGG | 0.462037 | 3.2:+77326301 | None:intergenic |
| GAAGTACGAAAGAGCGTATG+AGG | 0.502168 | 3.2:-77324319 | MS.gene48520:CDS |
| TCATGATGATATTATTTCCA+AGG | 0.502878 | 3.2:-77326318 | MS.gene48520:CDS |
| GAAGACAGGCATCTCTTGAC+TGG | 0.509264 | 3.2:-77324396 | MS.gene48520:CDS |
| CAGTGACAACATTCATTGCA+TGG | 0.547511 | 3.2:+77324427 | None:intergenic |
| CATGCAATGAATGTTGTCAC+TGG | 0.550116 | 3.2:-77324426 | MS.gene48520:CDS |
| ATTGTCGTGAAGTGCTGGGT+TGG | 0.550480 | 3.2:-77324341 | MS.gene48520:CDS |
| CATTGCATGGGAAAACAGAA+AGG | 0.570564 | 3.2:+77324440 | None:intergenic |
| TCACTGGGCCAAAAGAAGAC+AGG | 0.572382 | 3.2:-77324410 | MS.gene48520:CDS |
| GGTGATTGTCGTGAAGTGCT+GGG | 0.578151 | 3.2:-77324345 | MS.gene48520:CDS |
| CATGGGAAAACAGAAAGGCT+CGG | 0.593139 | 3.2:+77324445 | None:intergenic |
| AGTGACAACATTCATTGCAT+GGG | 0.597466 | 3.2:+77324428 | None:intergenic |
| TGAGGCGTCCCAGAAGTACA+AGG | 0.604854 | 3.2:-77324301 | MS.gene48520:CDS |
| GCGTCCCAGAAGTACAAGGA+AGG | 0.640509 | 3.2:-77324297 | MS.gene48520:CDS |
| ATGCAATGAATGTTGTCACT+GGG | 0.665460 | 3.2:-77324425 | MS.gene48520:CDS |
| AAACATCGGCAACAGTGTGG+AGG | 0.669170 | 3.2:+77324373 | None:intergenic |
| TATCATCATGAAGTGAAACA+TGG | 0.670134 | 3.2:+77326330 | None:intergenic |
| TTACAGCAGCAGTACAAGCG+AGG | 0.670520 | 3.2:+77326362 | None:intergenic |
| ACAATCACCACAGTAAACAT+CGG | 0.673082 | 3.2:+77324359 | None:intergenic |
| AGTAAACATCGGCAACAGTG+TGG | 0.687539 | 3.2:+77324370 | None:intergenic |
| ACTGTTGCCGATGTTTACTG+TGG | 0.707487 | 3.2:-77324366 | MS.gene48520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATGGAAATAAT+TGG | + | chr3.2:77324336-77324355 | None:intergenic | 10.0% |
| !! | AAAAAAAAATGGAAATAATT+GGG | + | chr3.2:77324335-77324354 | None:intergenic | 10.0% |
| !! | GTAATATTATGAAATAAGTT+TGG | + | chr3.2:77325212-77325231 | None:intergenic | 15.0% |
| !!! | ATTACTTTTACTAATAAAAC+AGG | + | chr3.2:77325834-77325853 | None:intergenic | 15.0% |
| !!! | GTAATTTTTAAAATCAAACT+TGG | + | chr3.2:77324458-77324477 | None:intergenic | 15.0% |
| !!! | GTTTGTAAATAGAATTTTTA+AGG | - | chr3.2:77324636-77324655 | MS.gene48520:intron | 15.0% |
| !!! | TTTGTTTCTTAAATAGAAAA+TGG | - | chr3.2:77325916-77325935 | MS.gene48520:intron | 15.0% |
| !! | AACAAAAAAAGAAATGCTAA+AGG | + | chr3.2:77325893-77325912 | None:intergenic | 20.0% |
| !! | ATACTATAGTTTATATAGAG+AGG | + | chr3.2:77325562-77325581 | None:intergenic | 20.0% |
| !! | TACTATAGTTTATATAGAGA+GGG | + | chr3.2:77325561-77325580 | None:intergenic | 20.0% |
| !! | TGAAAAGTCAAAAATTGTTA+TGG | - | chr3.2:77326353-77326372 | MS.gene48520:CDS | 20.0% |
| !!! | TTTCATTAATTTTGTAACCA+GGG | - | chr3.2:77326138-77326157 | MS.gene48520:intron | 20.0% |
| !!! | TTTTCATTAATTTTGTAACC+AGG | - | chr3.2:77326137-77326156 | MS.gene48520:intron | 20.0% |
| ! | ACAATATCAGTAAATGATCA+AGG | + | chr3.2:77326118-77326137 | None:intergenic | 25.0% |
| ! | AGTGACACAATTAAACATAT+GGG | - | chr3.2:77324910-77324929 | MS.gene48520:intron | 25.0% |
| ! | ATATGAATAGGAGAATCAAA+AGG | - | chr3.2:77325040-77325059 | MS.gene48520:intron | 25.0% |
| ! | ATCATGCATATCTTGTATTT+AGG | - | chr3.2:77324594-77324613 | MS.gene48520:intron | 25.0% |
| ! | ATTAATTTCTCTTGCACTAT+AGG | - | chr3.2:77324431-77324450 | MS.gene48520:CDS | 25.0% |
| ! | CATCAAAAGAAGAATTTAGT+TGG | + | chr3.2:77326041-77326060 | None:intergenic | 25.0% |
| ! | CTCTTTAGTAAATAAAGCAA+TGG | - | chr3.2:77325758-77325777 | MS.gene48520:intron | 25.0% |
| ! | TATGAATAGGAGAATCAAAA+GGG | - | chr3.2:77325041-77325060 | MS.gene48520:intron | 25.0% |
| ! | TCATGATGATATTATTTCCA+AGG | - | chr3.2:77324297-77324316 | MS.gene48520:CDS | 25.0% |
| ! | TCATGCATATCTTGTATTTA+GGG | - | chr3.2:77324595-77324614 | MS.gene48520:intron | 25.0% |
| ! | TTATAAAAGGGGGAAATATT+GGG | - | chr3.2:77325786-77325805 | MS.gene48520:intron | 25.0% |
| ! | TTATGAACCTAGAAATTGTA+CGG | + | chr3.2:77325866-77325885 | None:intergenic | 25.0% |
| ! | TTCAATTGCAATTTCAAATG+AGG | + | chr3.2:77325659-77325678 | None:intergenic | 25.0% |
| !! | CTATATTTAGAATGAATGCA+CGG | - | chr3.2:77324662-77324681 | MS.gene48520:intron | 25.0% |
| !! | TCATTTGAAATTGCAATTGA+AGG | - | chr3.2:77325658-77325677 | MS.gene48520:intron | 25.0% |
| !!! | AGAGTTAATTTGTTAGGATA+TGG | - | chr3.2:77324977-77324996 | MS.gene48520:intron | 25.0% |
| !!! | GAGTTAATTTGTTAGGATAT+GGG | - | chr3.2:77324978-77324997 | MS.gene48520:intron | 25.0% |
| !!! | TTTTTTTTGTGTTAACCCTT+CGG | + | chr3.2:77325505-77325524 | None:intergenic | 25.0% |
| AACAGACTGCATATTCAATT+AGG | + | chr3.2:77325622-77325641 | None:intergenic | 30.0% | |
| AATCAGCAATGACATACAAT+AGG | + | chr3.2:77324414-77324433 | None:intergenic | 30.0% | |
| ACAGACTGCATATTCAATTA+GGG | + | chr3.2:77325621-77325640 | None:intergenic | 30.0% | |
| AGTTATCACAGTAGCAATTT+AGG | - | chr3.2:77324714-77324733 | MS.gene48520:intron | 30.0% | |
| ATAGGCATAAACATTCCAAA+TGG | - | chr3.2:77326002-77326021 | MS.gene48520:intron | 30.0% | |
| ATCGATACTGAATGTTTGAT+AGG | - | chr3.2:77325984-77326003 | MS.gene48520:intron | 30.0% | |
| ATTAACTCTACATCCTAACA+AGG | + | chr3.2:77324966-77324985 | None:intergenic | 30.0% | |
| CAAAAATTGTTATGGAGAAC+TGG | - | chr3.2:77326361-77326380 | MS.gene48520:CDS | 30.0% | |
| CAGTGACACAATTAAACATA+TGG | - | chr3.2:77324909-77324928 | MS.gene48520:intron | 30.0% | |
| CATATCTTGTATTTAGGGAT+TGG | - | chr3.2:77324600-77324619 | MS.gene48520:intron | 30.0% | |
| CCAGATTATCATATATCAGA+TGG | - | chr3.2:77324528-77324547 | MS.gene48520:intron | 30.0% | |
| CCATCTGATATATGATAATC+TGG | + | chr3.2:77324531-77324550 | None:intergenic | 30.0% | |
| GGTACTTGGTTTAATTACAA+TGG | + | chr3.2:77325284-77325303 | None:intergenic | 30.0% | |
| GTTATAAAAGGGGGAAATAT+TGG | - | chr3.2:77325785-77325804 | MS.gene48520:intron | 30.0% | |
| TACAACAAGTTTCACATACA+CGG | + | chr3.2:77325305-77325324 | None:intergenic | 30.0% | |
| TATCATCATGAAGTGAAACA+TGG | + | chr3.2:77324288-77324307 | None:intergenic | 30.0% | |
| TGGATAAAATGGCAATTTGA+AGG | + | chr3.2:77325184-77325203 | None:intergenic | 30.0% | |
| TGTGAGTATCTCATATGAAT+AGG | - | chr3.2:77325028-77325047 | MS.gene48520:intron | 30.0% | |
| TTGTATTCCGTACAATTTCT+AGG | - | chr3.2:77325856-77325875 | MS.gene48520:intron | 30.0% | |
| ! | AGAATCTGAATTTGACTTCT+GGG | - | chr3.2:77325404-77325423 | MS.gene48520:intron | 30.0% |
| ! | ATGAAATAAGTTTGGCGTTT+TGG | + | chr3.2:77325204-77325223 | None:intergenic | 30.0% |
| ! | TATTATTTCCAAGGCTTTTC+AGG | - | chr3.2:77324306-77324325 | MS.gene48520:CDS | 30.0% |
| ! | TTAAGATTTTCGACCTTGTT+AGG | - | chr3.2:77324950-77324969 | MS.gene48520:intron | 30.0% |
| !! | AAACTTGTTGTAGCAACAAA+AGG | - | chr3.2:77325313-77325332 | MS.gene48520:intron | 30.0% |
| !! | GGATGTAGAGTTAATTTGTT+AGG | - | chr3.2:77324971-77324990 | MS.gene48520:intron | 30.0% |
| !! | TGTATCTGTAAAGTTGCTTT+TGG | - | chr3.2:77324853-77324872 | MS.gene48520:intron | 30.0% |
| !!! | AGTTGCTTTTGGTTGAAAAA+CGG | - | chr3.2:77324864-77324883 | MS.gene48520:intron | 30.0% |
| AACTGACATGTGTACTTGTA+CGG | + | chr3.2:77324698-77324717 | None:intergenic | 35.0% | |
| AATGGCATGAGTTAATACGA+GGG | + | chr3.2:77325266-77325285 | None:intergenic | 35.0% | |
| ACAATCACCACAGTAAACAT+CGG | + | chr3.2:77326259-77326278 | None:intergenic | 35.0% | |
| ACATATGGGATATGTTGAGA+AGG | - | chr3.2:77324924-77324943 | MS.gene48520:intron | 35.0% | |
| AGTGACAACATTCATTGCAT+GGG | + | chr3.2:77326190-77326209 | None:intergenic | 35.0% | |
| ATGCAATGAATGTTGTCACT+GGG | - | chr3.2:77326190-77326209 | MS.gene48520:intron | 35.0% | |
| CAATTAGGGGTTAAACATGA+GGG | + | chr3.2:77325607-77325626 | None:intergenic | 35.0% | |
| CAGACTGCATATTCAATTAG+GGG | + | chr3.2:77325620-77325639 | None:intergenic | 35.0% | |
| CAGCCAAATATCACAAAGAT+TGG | - | chr3.2:77325951-77325970 | MS.gene48520:intron | 35.0% | |
| CATCGTCTACAATGAATTTC+AGG | - | chr3.2:77324370-77324389 | MS.gene48520:CDS | 35.0% | |
| CTCGCAATTGATTAGAAGTT+AGG | + | chr3.2:77324504-77324523 | None:intergenic | 35.0% | |
| CTGCCAATCTTTGTGATATT+TGG | + | chr3.2:77325957-77325976 | None:intergenic | 35.0% | |
| GACAGGTTTACAATAGTAGT+TGG | + | chr3.2:77325539-77325558 | None:intergenic | 35.0% | |
| GCAATTTGAAGGAAATCTGA+CGG | + | chr3.2:77325173-77325192 | None:intergenic | 35.0% | |
| GGAGAAAACAACTATCCATT+TGG | + | chr3.2:77326020-77326039 | None:intergenic | 35.0% | |
| TAGTTTATATAGAGAGGGAC+AGG | + | chr3.2:77325556-77325575 | None:intergenic | 35.0% | |
| TATCAGATGGTTTCTGTTTG+TGG | - | chr3.2:77324541-77324560 | MS.gene48520:intron | 35.0% | |
| TCAATTAGGGGTTAAACATG+AGG | + | chr3.2:77325608-77325627 | None:intergenic | 35.0% | |
| ! | AAACGGCATTTTAAATGTGC+TGG | - | chr3.2:77324881-77324900 | MS.gene48520:intron | 35.0% |
| ! | AACGGCATTTTAAATGTGCT+GGG | - | chr3.2:77324882-77324901 | MS.gene48520:intron | 35.0% |
| ! | AATGGCTCTGTTATAAAAGG+GGG | - | chr3.2:77325776-77325795 | MS.gene48520:intron | 35.0% |
| ! | AGCAATGGCTCTGTTATAAA+AGG | - | chr3.2:77325773-77325792 | MS.gene48520:intron | 35.0% |
| ! | ATTTTCCTTCCTTGTACTTC+TGG | + | chr3.2:77326326-77326345 | None:intergenic | 35.0% |
| ! | CAATGGCTCTGTTATAAAAG+GGG | - | chr3.2:77325775-77325794 | MS.gene48520:intron | 35.0% |
| ! | GAGAATCTGAATTTGACTTC+TGG | - | chr3.2:77325403-77325422 | MS.gene48520:intron | 35.0% |
| ! | GCAATGGCTCTGTTATAAAA+GGG | - | chr3.2:77325774-77325793 | MS.gene48520:intron | 35.0% |
| ! | TGTTAGGATATGGGTTATGA+AGG | - | chr3.2:77324987-77325006 | MS.gene48520:intron | 35.0% |
| ! | TTTTCCTTCCTTGTACTTCT+GGG | + | chr3.2:77326325-77326344 | None:intergenic | 35.0% |
| ! | TTTTGTAACCAGGGAAGAAA+TGG | - | chr3.2:77326147-77326166 | MS.gene48520:intron | 35.0% |
| !! | GTTTGGCGTTTTGGATAAAA+TGG | + | chr3.2:77325195-77325214 | None:intergenic | 35.0% |
| AACAAATGACCGAGCTTAGT+TGG | - | chr3.2:77325348-77325367 | MS.gene48520:intron | 40.0% | |
| AGGGATGAGTTACAACACAA+GGG | + | chr3.2:77325247-77325266 | None:intergenic | 40.0% | |
| AGTTTCACATACACGGTACT+TGG | + | chr3.2:77325298-77325317 | None:intergenic | 40.0% | |
| CAATGGCATGAGTTAATACG+AGG | + | chr3.2:77325267-77325286 | None:intergenic | 40.0% | |
| CAGTGACAACATTCATTGCA+TGG | + | chr3.2:77326191-77326210 | None:intergenic | 40.0% | |
| CATGCAATGAATGTTGTCAC+TGG | - | chr3.2:77326189-77326208 | MS.gene48520:intron | 40.0% | |
| CATTGCATGGGAAAACAGAA+AGG | + | chr3.2:77326178-77326197 | None:intergenic | 40.0% | |
| GCAAGTTATAACTCATTCGC+AGG | + | chr3.2:77325146-77325165 | None:intergenic | 40.0% | |
| GCTCATTAACCAACTAAGCT+CGG | + | chr3.2:77325360-77325379 | None:intergenic | 40.0% | |
| GGTTTCTGTTTGTGGTACTA+GGG | - | chr3.2:77324549-77324568 | MS.gene48520:intron | 40.0% | |
| GTTGCGAGCTAAATAAAGTC+TGG | + | chr3.2:77325445-77325464 | None:intergenic | 40.0% | |
| TAAGCTCGGTCATTTGTTTG+CGG | + | chr3.2:77325346-77325365 | None:intergenic | 40.0% | |
| TCTCGCGAAAGATTCATCAT+TGG | + | chr3.2:77325387-77325406 | None:intergenic | 40.0% | |
| TGGTTTCTGTTTGTGGTACT+AGG | - | chr3.2:77324548-77324567 | MS.gene48520:intron | 40.0% | |
| TGTTAACCCTTCGGTTCTTA+GGG | + | chr3.2:77325496-77325515 | None:intergenic | 40.0% | |
| TTTGTCTGCAGAGAAAGTGA+CGG | - | chr3.2:77324771-77324790 | MS.gene48520:intron | 40.0% | |
| ! | AAGAGATGCCTGTCTTCTTT+TGG | + | chr3.2:77326216-77326235 | None:intergenic | 40.0% |
| ! | AGAATCAAAAGGGTACAGAG+GGG | - | chr3.2:77325051-77325070 | MS.gene48520:intron | 40.0% |
| ! | ATCTGAATTTGACTTCTGGG+TGG | - | chr3.2:77325407-77325426 | MS.gene48520:intron | 40.0% |
| ! | GAGAATCAAAAGGGTACAGA+GGG | - | chr3.2:77325050-77325069 | MS.gene48520:intron | 40.0% |
| !! | TGCCTCTAAAATCACAGTGA+CGG | + | chr3.2:77324822-77324841 | None:intergenic | 40.0% |
| ACTGTTGCCGATGTTTACTG+TGG | - | chr3.2:77326249-77326268 | MS.gene48520:intron | 45.0% | |
| AGTAAACATCGGCAACAGTG+TGG | + | chr3.2:77326248-77326267 | None:intergenic | 45.0% | |
| ATGAGGGATGCACTACAGAT+TGG | + | chr3.2:77325591-77325610 | None:intergenic | 45.0% | |
| CATGGGAAAACAGAAAGGCT+CGG | + | chr3.2:77326173-77326192 | None:intergenic | 45.0% | |
| CGCGAAAGATTCATCATTGG+TGG | + | chr3.2:77325384-77325403 | None:intergenic | 45.0% | |
| GAGGGATGAGTTACAACACA+AGG | + | chr3.2:77325248-77325267 | None:intergenic | 45.0% | |
| GTGTTAACCCTTCGGTTCTT+AGG | + | chr3.2:77325497-77325516 | None:intergenic | 45.0% | |
| GTTAACCCTTCGGTTCTTAG+GGG | + | chr3.2:77325495-77325514 | None:intergenic | 45.0% | |
| TGAGTTACAACACAAGGGAG+AGG | + | chr3.2:77325242-77325261 | None:intergenic | 45.0% | |
| TTGGGTTACCTGAAAAGCCT+TGG | + | chr3.2:77324317-77324336 | None:intergenic | 45.0% | |
| ! | GAAGTACGAAAGAGCGTATG+AGG | - | chr3.2:77326296-77326315 | MS.gene48520:intron | 45.0% |
| ! | GACCGTCACTGTGATTTTAG+AGG | - | chr3.2:77324817-77324836 | MS.gene48520:intron | 45.0% |
| ! | GGAGAATCAAAAGGGTACAG+AGG | - | chr3.2:77325049-77325068 | MS.gene48520:intron | 45.0% |
| ! | TTTAGCTCGCAACCAAACTC+CGG | - | chr3.2:77325452-77325471 | MS.gene48520:intron | 45.0% |
| !! | TTAACAAAAAAAAAAAAAAA+TGG | + | chr3.2:77324346-77324365 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTTTTTTTTGTTA+AGG | - | chr3.2:77324345-77324364 | MS.gene48520:CDS | 5.0% |
| AAACATCGGCAACAGTGTGG+AGG | + | chr3.2:77326245-77326264 | None:intergenic | 50.0% | |
| GAAGACAGGCATCTCTTGAC+TGG | - | chr3.2:77326219-77326238 | MS.gene48520:intron | 50.0% | |
| TCACTGGGCCAAAAGAAGAC+AGG | - | chr3.2:77326205-77326224 | MS.gene48520:intron | 50.0% | |
| TGGTGATTGTCGTGAAGTGC+TGG | - | chr3.2:77326269-77326288 | MS.gene48520:intron | 50.0% | |
| TTACAGCAGCAGTACAAGCG+AGG | + | chr3.2:77324256-77324275 | None:intergenic | 50.0% | |
| ! | GGTGATTGTCGTGAAGTGCT+GGG | - | chr3.2:77326270-77326289 | MS.gene48520:intron | 50.0% |
| !! | ATTGTCGTGAAGTGCTGGGT+TGG | - | chr3.2:77326274-77326293 | MS.gene48520:intron | 50.0% |
| CAATCCACGCGCAACTCTTG+CGG | - | chr3.2:77325722-77325741 | MS.gene48520:intron | 55.0% | |
| CCTCTCCCCTAAGAACCGAA+GGG | - | chr3.2:77325487-77325506 | MS.gene48520:intron | 55.0% | |
| CCTTCGGTTCTTAGGGGAGA+GGG | + | chr3.2:77325489-77325508 | None:intergenic | 55.0% | |
| CTTCGGTTCTTAGGGGAGAG+GGG | + | chr3.2:77325488-77325507 | None:intergenic | 55.0% | |
| GGCGCTAGTATTCCGGAGTT+TGG | + | chr3.2:77325467-77325486 | None:intergenic | 55.0% | |
| ! | GCGTCCCAGAAGTACAAGGA+AGG | - | chr3.2:77326318-77326337 | MS.gene48520:CDS | 55.0% |
| ! | TGAGGCGTCCCAGAAGTACA+AGG | - | chr3.2:77326314-77326333 | MS.gene48520:CDS | 55.0% |
| AGGCTCGGCCATTTCTTCCC+TGG | + | chr3.2:77326158-77326177 | None:intergenic | 60.0% | |
| ATGACCGCAAGAGTTGCGCG+TGG | + | chr3.2:77325729-77325748 | None:intergenic | 60.0% | |
| CCCTCTCCCCTAAGAACCGA+AGG | - | chr3.2:77325486-77325505 | MS.gene48520:intron | 60.0% | |
| CCCTTCGGTTCTTAGGGGAG+AGG | + | chr3.2:77325490-77325509 | None:intergenic | 60.0% | |
| !! | GGAGAGGGGCGCTAGTATTC+CGG | + | chr3.2:77325474-77325493 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 77324251 | 77326386 | 77324251 | ID=MS.gene48520 |
| chr3.2 | mRNA | 77324251 | 77326386 | 77324251 | ID=MS.gene48520.t1;Parent=MS.gene48520 |
| chr3.2 | exon | 77326310 | 77326386 | 77326310 | ID=MS.gene48520.t1.exon1;Parent=MS.gene48520.t1 |
| chr3.2 | CDS | 77326310 | 77326386 | 77326310 | ID=cds.MS.gene48520.t1;Parent=MS.gene48520.t1 |
| chr3.2 | exon | 77324251 | 77324478 | 77324251 | ID=MS.gene48520.t1.exon2;Parent=MS.gene48520.t1 |
| chr3.2 | CDS | 77324251 | 77324478 | 77324251 | ID=cds.MS.gene48520.t1;Parent=MS.gene48520.t1 |
| Gene Sequence |
| Protein sequence |
