Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48626.t1 | XP_024631911.1 | 70.1 | 301 | 38 | 5 | 64 | 312 | 283 | 583 | 2.00E-83 | 319.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48626.t1 | A0A3Q7XGP6 | 56.5 | 209 | 40 | 5 | 96 | 260 | 45 | 246 | 7.5e-48 | 200.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene48626 | 0.811168 | 8.01E-51 | -1.69E-46 |
| MS.gene05265 | MS.gene48626 | 0.808257 | 3.39E-50 | -1.69E-46 |
| MS.gene053998 | MS.gene48626 | 0.800452 | 1.43E-48 | -1.69E-46 |
| MS.gene056174 | MS.gene48626 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene060521 | MS.gene48626 | 0.811968 | 5.37E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48626.t1 | MTR_0125s0060 | 90.769 | 130 | 12 | 0 | 183 | 312 | 1 | 130 | 8.24e-79 | 236 |
| MS.gene48626.t1 | MTR_2g035110 | 80.741 | 135 | 26 | 0 | 183 | 317 | 1 | 135 | 8.73e-70 | 213 |
| MS.gene48626.t1 | MTR_8g066845 | 58.491 | 106 | 24 | 3 | 213 | 317 | 1 | 87 | 4.01e-25 | 97.1 |
| MS.gene48626.t1 | MTR_4g012560 | 81.481 | 54 | 5 | 1 | 230 | 283 | 24 | 72 | 3.48e-17 | 75.5 |
| MS.gene48626.t1 | MTR_4g065020 | 54.930 | 71 | 13 | 1 | 96 | 166 | 27 | 78 | 3.51e-16 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 60 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCATCTGGTTTCCCTTT+TGG | 0.170423 | 4.1:-67585883 | None:intergenic |
| TCTTTGTATGAAGGGATTTA+AGG | 0.183119 | 4.1:+67584971 | MS.gene48626:CDS |
| AATTGACAATGATATTTATA+TGG | 0.247121 | 4.1:+67586088 | MS.gene48626:CDS |
| AACAAGAAGGGGCGCATATT+TGG | 0.259894 | 4.1:+67586128 | MS.gene48626:CDS |
| TGAATTGAAGTGTTCATATT+AGG | 0.290831 | 4.1:-67586353 | None:intergenic |
| TTAAGGAGGATTACTATTAC+TGG | 0.299244 | 4.1:+67584988 | MS.gene48626:CDS |
| TCCATCCACTTGCGATGTTC+AGG | 0.310535 | 4.1:-67584774 | None:intergenic |
| CCATTATCACCTTCTCCTTC+CGG | 0.338322 | 4.1:-67586377 | None:intergenic |
| AAGGGGCGCATATTTGGATT+AGG | 0.373630 | 4.1:+67586134 | MS.gene48626:CDS |
| GATATTTATATGGAAATTGT+TGG | 0.391812 | 4.1:+67586098 | MS.gene48626:CDS |
| GTTTCTCAAACGTTTGAGTT+TGG | 0.397323 | 4.1:-67586022 | None:intergenic |
| GAGCGCTTGGAGCAAATGAT+TGG | 0.408396 | 4.1:+67586320 | MS.gene48626:CDS |
| ATCGCAAGTGGATGGATAAT+AGG | 0.414225 | 4.1:+67584781 | MS.gene48626:CDS |
| GACAAACTTCATAGACCAAA+AGG | 0.414225 | 4.1:+67585868 | MS.gene48626:CDS |
| CCGGAAGGAGAAGGTGATAA+TGG | 0.416904 | 4.1:+67586377 | MS.gene48626:CDS |
| GTGCGTAGTGGTCATGATAA+AGG | 0.417897 | 4.1:+67585614 | MS.gene48626:CDS |
| TCTGTAACTCTACTATTATC+AGG | 0.438683 | 4.1:-67584810 | None:intergenic |
| CATGAAACATCTTTGTATGA+AGG | 0.458685 | 4.1:+67584962 | MS.gene48626:CDS |
| GTTTCATTAAACCACCCATC+TGG | 0.467331 | 4.1:-67585895 | None:intergenic |
| TTAGAGAGTGGAATTGGATA+GGG | 0.471643 | 4.1:+67585822 | MS.gene48626:intron |
| TTTAGAGAGTGGAATTGGAT+AGG | 0.476342 | 4.1:+67585821 | MS.gene48626:intron |
| AGAAACGCTAAAACTGAAGA+TGG | 0.499466 | 4.1:+67586298 | MS.gene48626:CDS |
| AAAACTGAAGATGGAGCGCT+TGG | 0.500382 | 4.1:+67586307 | MS.gene48626:CDS |
| ATGAAACATCTTTGTATGAA+GGG | 0.500891 | 4.1:+67584963 | MS.gene48626:CDS |
| TGTTGGAGGCATTAACAAGA+AGG | 0.515610 | 4.1:+67586115 | MS.gene48626:CDS |
| ATTTATATGGAAATTGTTGG+AGG | 0.522832 | 4.1:+67586101 | MS.gene48626:CDS |
| TCATTGTCAATTTCTTCAGT+AGG | 0.525205 | 4.1:-67586077 | None:intergenic |
| AGCGCTTGGAGCAAATGATT+GGG | 0.526657 | 4.1:+67586321 | MS.gene48626:CDS |
| TATGAACACTTCAATTCAGC+CGG | 0.533653 | 4.1:+67586358 | MS.gene48626:CDS |
| CCACGGTGAACAAAGGCCTT+CGG | 0.536881 | 4.1:+67585016 | MS.gene48626:CDS |
| TCCTGAACATCGCAAGTGGA+TGG | 0.540917 | 4.1:+67584773 | MS.gene48626:CDS |
| GTGGTCATGATAAAGGTGAA+TGG | 0.542038 | 4.1:+67585621 | MS.gene48626:CDS |
| TCAATTCAGCCGGAAGGAGA+AGG | 0.553755 | 4.1:+67586368 | MS.gene48626:CDS |
| GTTGGAGGCATTAACAAGAA+GGG | 0.555037 | 4.1:+67586116 | MS.gene48626:CDS |
| ACAAACTTCATAGACCAAAA+GGG | 0.556595 | 4.1:+67585869 | MS.gene48626:CDS |
| TCTACATCGGTAGAAATTGA+AGG | 0.559331 | 4.1:-67586197 | None:intergenic |
| TTGTATGAAGGGATTTAAGG+AGG | 0.560562 | 4.1:+67584974 | MS.gene48626:CDS |
| TGGTGACAACTTGAAACAGT+TGG | 0.561040 | 4.1:+67585646 | MS.gene48626:CDS |
| AGACCAAAAGGGAAACCAGA+TGG | 0.568337 | 4.1:+67585880 | MS.gene48626:CDS |
| GACCAAAAGGGAAACCAGAT+GGG | 0.568542 | 4.1:+67585881 | MS.gene48626:CDS |
| ACCACTACGCACCTTGAACA+TGG | 0.571128 | 4.1:-67585603 | None:intergenic |
| TCGGTAGAAATTGAAGGTGA+TGG | 0.579722 | 4.1:-67586191 | None:intergenic |
| TTGGAGGCATTAACAAGAAG+GGG | 0.580609 | 4.1:+67586117 | MS.gene48626:CDS |
| CATGATAAAGGTGAATGGAT+TGG | 0.585265 | 4.1:+67585626 | MS.gene48626:CDS |
| TCGTAAATCTCAAACCATGT+TGG | 0.585577 | 4.1:-67585847 | None:intergenic |
| AAGGCCTTCGGTTATGCCAG+TGG | 0.585594 | 4.1:+67585028 | MS.gene48626:CDS |
| TGACAACTTGAAACAGTTGG+AGG | 0.589439 | 4.1:+67585649 | MS.gene48626:CDS |
| TACTATTACTGGAGTAGCCA+CGG | 0.591918 | 4.1:+67584999 | MS.gene48626:CDS |
| GTTTGTAGGCTAAATTCAAG+TGG | 0.608599 | 4.1:+67585513 | MS.gene48626:intron |
| GGAGTAGCCACGGTGAACAA+AGG | 0.612698 | 4.1:+67585009 | MS.gene48626:CDS |
| AAAAGAGCTTTAATAGTAGG+GGG | 0.614401 | 4.1:+67585561 | MS.gene48626:CDS |
| AACACTTCAATTCAGCCGGA+AGG | 0.621409 | 4.1:+67586362 | MS.gene48626:CDS |
| AGATTCCTGAACATCGCAAG+TGG | 0.622921 | 4.1:+67584769 | MS.gene48626:CDS |
| TTTGAGAAACACTCTCAAAG+TGG | 0.627086 | 4.1:+67586035 | MS.gene48626:CDS |
| GAAACCACTGGCATAACCGA+AGG | 0.645260 | 4.1:-67585032 | None:intergenic |
| ATGACATCGTCAACTAACTG+AGG | 0.647309 | 4.1:-67584942 | None:intergenic |
| AATTGGATAGGGAACCAACA+TGG | 0.651250 | 4.1:+67585833 | MS.gene48626:CDS |
| GCCATGTTCAAGGTGCGTAG+TGG | 0.664644 | 4.1:+67585602 | MS.gene48626:CDS |
| CAAAAGGGAAACCAGATGGG+TGG | 0.669221 | 4.1:+67585884 | MS.gene48626:CDS |
| CCGAAGGCCTTTGTTCACCG+TGG | 0.696547 | 4.1:-67585016 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATCTGATAGTATT+TGG | + | chr4.1:67585293-67585312 | MS.gene48626:intron | 15.0% |
| !! | AAATTATGATATCTTATAGT+TGG | + | chr4.1:67585212-67585231 | MS.gene48626:intron | 15.0% |
| !! | AATTGACAATGATATTTATA+TGG | + | chr4.1:67586088-67586107 | MS.gene48626:CDS | 15.0% |
| !! | TCATATCATATAAATCAAAT+AGG | - | chr4.1:67585418-67585437 | None:intergenic | 15.0% |
| !! | ACAAATGTAGTTACATAAAT+AGG | + | chr4.1:67585154-67585173 | MS.gene48626:intron | 20.0% |
| !! | CATAATTTCACAATATTCAT+TGG | - | chr4.1:67585200-67585219 | None:intergenic | 20.0% |
| !! | CTATGACTAATAAACAAAAT+AGG | + | chr4.1:67585704-67585723 | MS.gene48626:intron | 20.0% |
| !! | GATATTTATATGGAAATTGT+TGG | + | chr4.1:67586098-67586117 | MS.gene48626:CDS | 20.0% |
| !! | TAGAGGAAAGTTATATAAAT+AGG | + | chr4.1:67585336-67585355 | MS.gene48626:intron | 20.0% |
| !!! | TAAAAAGAGCTTTAATAGTA+GGG | + | chr4.1:67585559-67585578 | MS.gene48626:CDS | 20.0% |
| !!! | TAATAGTAACTCTTTTTTAC+AGG | + | chr4.1:67585992-67586011 | MS.gene48626:intron | 20.0% |
| !!! | TTAAAAAGAGCTTTAATAGT+AGG | + | chr4.1:67585558-67585577 | MS.gene48626:CDS | 20.0% |
| ! | AATTTCCTATCATGTAGAAT+AGG | + | chr4.1:67585121-67585140 | MS.gene48626:intron | 25.0% |
| ! | ACAAGATGATTTCAAAAAAG+TGG | + | chr4.1:67584878-67584897 | MS.gene48626:CDS | 25.0% |
| ! | ATGAAACATCTTTGTATGAA+GGG | + | chr4.1:67584963-67584982 | MS.gene48626:CDS | 25.0% |
| ! | ATGAAGCTATGTATTTGAAA+AGG | - | chr4.1:67585482-67585501 | None:intergenic | 25.0% |
| ! | ATTAAAAAATGCCATGTTCA+AGG | + | chr4.1:67585592-67585611 | MS.gene48626:CDS | 25.0% |
| ! | ATTTATATGGAAATTGTTGG+AGG | + | chr4.1:67586101-67586120 | MS.gene48626:CDS | 25.0% |
| ! | CAAGATGATTTCAAAAAAGT+GGG | + | chr4.1:67584879-67584898 | MS.gene48626:CDS | 25.0% |
| ! | TATTTCCTATTCTACATGAT+AGG | - | chr4.1:67585129-67585148 | None:intergenic | 25.0% |
| !! | AAAAAGAGCTTTAATAGTAG+GGG | + | chr4.1:67585560-67585579 | MS.gene48626:CDS | 25.0% |
| !! | TACACTTGCATATTTTACAT+GGG | - | chr4.1:67584917-67584936 | None:intergenic | 25.0% |
| !! | TAGAGTTACAGATAAGTTTT+TGG | + | chr4.1:67584821-67584840 | MS.gene48626:CDS | 25.0% |
| !! | TGAATTGAAGTGTTCATATT+AGG | - | chr4.1:67586356-67586375 | None:intergenic | 25.0% |
| !!! | CATGACATTTTTTTGTTTGT+AGG | + | chr4.1:67585499-67585518 | MS.gene48626:intron | 25.0% |
| !!! | GCTTTGGTTTAATGATTTTA+AGG | + | chr4.1:67585073-67585092 | MS.gene48626:intron | 25.0% |
| !!! | TTTTTTCGAAGAATCTACAT+CGG | - | chr4.1:67586213-67586232 | None:intergenic | 25.0% |
| AAAAAAGCAGCAATTCCAAT+AGG | - | chr4.1:67585393-67585412 | None:intergenic | 30.0% | |
| ACAAACTTCATAGACCAAAA+GGG | + | chr4.1:67585869-67585888 | MS.gene48626:CDS | 30.0% | |
| CATGAAACATCTTTGTATGA+AGG | + | chr4.1:67584962-67584981 | MS.gene48626:CDS | 30.0% | |
| TAGAGTGCATAGAAAAAGAA+TGG | + | chr4.1:67585774-67585793 | MS.gene48626:intron | 30.0% | |
| TCATTGTCAATTTCTTCAGT+AGG | - | chr4.1:67586080-67586099 | None:intergenic | 30.0% | |
| TCTGTAACTCTACTATTATC+AGG | - | chr4.1:67584813-67584832 | None:intergenic | 30.0% | |
| TCTTTGTATGAAGGGATTTA+AGG | + | chr4.1:67584971-67584990 | MS.gene48626:CDS | 30.0% | |
| TTAAATGGGAAGAAGAGAAA+TGG | + | chr4.1:67585672-67585691 | MS.gene48626:intron | 30.0% | |
| TTAAGGAGGATTACTATTAC+TGG | + | chr4.1:67584988-67585007 | MS.gene48626:CDS | 30.0% | |
| ! | AAAAGAGCTTTAATAGTAGG+GGG | + | chr4.1:67585561-67585580 | MS.gene48626:CDS | 30.0% |
| ! | ATGAAGCTTCATTGTTACTT+AGG | + | chr4.1:67585441-67585460 | MS.gene48626:intron | 30.0% |
| ! | CTACACTTGCATATTTTACA+TGG | - | chr4.1:67584918-67584937 | None:intergenic | 30.0% |
| ! | TGATAGTATTTGGTAGCATA+GGG | + | chr4.1:67585303-67585322 | MS.gene48626:intron | 30.0% |
| !!! | AATGTTTTAGAGAGTGGAAT+TGG | + | chr4.1:67585816-67585835 | MS.gene48626:intron | 30.0% |
| !!! | GTTACAGATAAGTTTTTGGT+CGG | + | chr4.1:67584825-67584844 | MS.gene48626:CDS | 30.0% |
| !!! | TTACAGATAAGTTTTTGGTC+GGG | + | chr4.1:67584826-67584845 | MS.gene48626:CDS | 30.0% |
| ACAACTCGTATTAGTTGCTT+TGG | + | chr4.1:67585057-67585076 | MS.gene48626:intron | 35.0% | |
| AGAAACGCTAAAACTGAAGA+TGG | + | chr4.1:67586298-67586317 | MS.gene48626:CDS | 35.0% | |
| CATGATAAAGGTGAATGGAT+TGG | + | chr4.1:67585626-67585645 | MS.gene48626:CDS | 35.0% | |
| GAAAAAGAATGGTTAGAGAG+TGG | + | chr4.1:67585785-67585804 | MS.gene48626:intron | 35.0% | |
| GAAACAGTTGGAGGTTAAAT+GGG | + | chr4.1:67585658-67585677 | MS.gene48626:intron | 35.0% | |
| GACAAACTTCATAGACCAAA+AGG | + | chr4.1:67585868-67585887 | MS.gene48626:CDS | 35.0% | |
| GTTTGTAGGCTAAATTCAAG+TGG | + | chr4.1:67585513-67585532 | MS.gene48626:intron | 35.0% | |
| TATGAACACTTCAATTCAGC+CGG | + | chr4.1:67586358-67586377 | MS.gene48626:CDS | 35.0% | |
| TATGTGCAACATGATCCTAT+TGG | + | chr4.1:67585375-67585394 | MS.gene48626:intron | 35.0% | |
| TCGTAAATCTCAAACCATGT+TGG | - | chr4.1:67585850-67585869 | None:intergenic | 35.0% | |
| TCTACATCGGTAGAAATTGA+AGG | - | chr4.1:67586200-67586219 | None:intergenic | 35.0% | |
| TGAAACAGTTGGAGGTTAAA+TGG | + | chr4.1:67585657-67585676 | MS.gene48626:intron | 35.0% | |
| TTAGAGAGTGGAATTGGATA+GGG | + | chr4.1:67585822-67585841 | MS.gene48626:intron | 35.0% | |
| TTCGAAAAAAGTTGCTGCTA+TGG | + | chr4.1:67586223-67586242 | MS.gene48626:CDS | 35.0% | |
| TTGTATGAAGGGATTTAAGG+AGG | + | chr4.1:67584974-67584993 | MS.gene48626:CDS | 35.0% | |
| TTTAGAGAGTGGAATTGGAT+AGG | + | chr4.1:67585821-67585840 | MS.gene48626:intron | 35.0% | |
| TTTGAGAAACACTCTCAAAG+TGG | + | chr4.1:67586035-67586054 | MS.gene48626:CDS | 35.0% | |
| ! | CAAAATAGGCAGTCTAAAGT+TGG | + | chr4.1:67585718-67585737 | MS.gene48626:intron | 35.0% |
| ! | CTGATAGTATTTGGTAGCAT+AGG | + | chr4.1:67585302-67585321 | MS.gene48626:intron | 35.0% |
| ! | GATAGTATTTGGTAGCATAG+GGG | + | chr4.1:67585304-67585323 | MS.gene48626:intron | 35.0% |
| ! | GTTTCTCAAACGTTTGAGTT+TGG | - | chr4.1:67586025-67586044 | None:intergenic | 35.0% |
| !!! | TACAGATAAGTTTTTGGTCG+GGG | + | chr4.1:67584827-67584846 | MS.gene48626:CDS | 35.0% |
| !!! | TTGGACAATGTTTTAGAGAG+TGG | + | chr4.1:67585810-67585829 | MS.gene48626:intron | 35.0% |
| AATTGGATAGGGAACCAACA+TGG | + | chr4.1:67585833-67585852 | MS.gene48626:CDS | 40.0% | |
| ATCGCAAGTGGATGGATAAT+AGG | + | chr4.1:67584781-67584800 | MS.gene48626:CDS | 40.0% | |
| ATGACATCGTCAACTAACTG+AGG | - | chr4.1:67584945-67584964 | None:intergenic | 40.0% | |
| CATAGGGGATATACAAGTAG+AGG | + | chr4.1:67585319-67585338 | MS.gene48626:intron | 40.0% | |
| CTTTAATAGTAGGGGGTCTT+TGG | + | chr4.1:67585568-67585587 | MS.gene48626:CDS | 40.0% | |
| GAAAAAAGTTGCTGCTATGG+AGG | + | chr4.1:67586226-67586245 | MS.gene48626:CDS | 40.0% | |
| GAATGGTTAGAGAGTGGAAT+TGG | + | chr4.1:67585791-67585810 | MS.gene48626:intron | 40.0% | |
| GTGGTCATGATAAAGGTGAA+TGG | + | chr4.1:67585621-67585640 | MS.gene48626:CDS | 40.0% | |
| GTTTCATTAAACCACCCATC+TGG | - | chr4.1:67585898-67585917 | None:intergenic | 40.0% | |
| TACTATTACTGGAGTAGCCA+CGG | + | chr4.1:67584999-67585018 | MS.gene48626:CDS | 40.0% | |
| TCGGTAGAAATTGAAGGTGA+TGG | - | chr4.1:67586194-67586213 | None:intergenic | 40.0% | |
| TCTATGCACTCTAGCAGATA+TGG | - | chr4.1:67585767-67585786 | None:intergenic | 40.0% | |
| TGACAACTTGAAACAGTTGG+AGG | + | chr4.1:67585649-67585668 | MS.gene48626:CDS | 40.0% | |
| TGGTGACAACTTGAAACAGT+TGG | + | chr4.1:67585646-67585665 | MS.gene48626:CDS | 40.0% | |
| ! | TACGAGTTGTTTGAAACCAC+TGG | - | chr4.1:67585047-67585066 | None:intergenic | 40.0% |
| !! | GTTGGAGGCATTAACAAGAA+GGG | + | chr4.1:67586116-67586135 | MS.gene48626:CDS | 40.0% |
| !! | TGTTGGAGGCATTAACAAGA+AGG | + | chr4.1:67586115-67586134 | MS.gene48626:CDS | 40.0% |
| !! | TTGGAGGCATTAACAAGAAG+GGG | + | chr4.1:67586117-67586136 | MS.gene48626:CDS | 40.0% |
| AACACTTCAATTCAGCCGGA+AGG | + | chr4.1:67586362-67586381 | MS.gene48626:CDS | 45.0% | |
| AGACCAAAAGGGAAACCAGA+TGG | + | chr4.1:67585880-67585899 | MS.gene48626:CDS | 45.0% | |
| AGATTCCTGAACATCGCAAG+TGG | + | chr4.1:67584769-67584788 | MS.gene48626:CDS | 45.0% | |
| AGCGCTTGGAGCAAATGATT+GGG | + | chr4.1:67586321-67586340 | MS.gene48626:CDS | 45.0% | |
| CCATTATCACCTTCTCCTTC+CGG | - | chr4.1:67586380-67586399 | None:intergenic | 45.0% | |
| GACCAAAAGGGAAACCAGAT+GGG | + | chr4.1:67585881-67585900 | MS.gene48626:CDS | 45.0% | |
| GTGCGTAGTGGTCATGATAA+AGG | + | chr4.1:67585614-67585633 | MS.gene48626:CDS | 45.0% | |
| GTTGGACACAATGTGCATAG+TGG | + | chr4.1:67585736-67585755 | MS.gene48626:intron | 45.0% | |
| ! | AAAACTGAAGATGGAGCGCT+TGG | + | chr4.1:67586307-67586326 | MS.gene48626:CDS | 45.0% |
| ! | AACAAGAAGGGGCGCATATT+TGG | + | chr4.1:67586128-67586147 | MS.gene48626:CDS | 45.0% |
| ! | AAGGGGCGCATATTTGGATT+AGG | + | chr4.1:67586134-67586153 | MS.gene48626:CDS | 45.0% |
| ACCACTACGCACCTTGAACA+TGG | - | chr4.1:67585606-67585625 | None:intergenic | 50.0% | |
| CAAAAGGGAAACCAGATGGG+TGG | + | chr4.1:67585884-67585903 | MS.gene48626:CDS | 50.0% | |
| CCGGAAGGAGAAGGTGATAA+TGG | + | chr4.1:67586377-67586396 | MS.gene48626:CDS | 50.0% | |
| GAAACCACTGGCATAACCGA+AGG | - | chr4.1:67585035-67585054 | None:intergenic | 50.0% | |
| GAGCGCTTGGAGCAAATGAT+TGG | + | chr4.1:67586320-67586339 | MS.gene48626:CDS | 50.0% | |
| GGACACAATGTGCATAGTGG+AGG | + | chr4.1:67585739-67585758 | MS.gene48626:intron | 50.0% | |
| TCAATTCAGCCGGAAGGAGA+AGG | + | chr4.1:67586368-67586387 | MS.gene48626:CDS | 50.0% | |
| TCCATCCACTTGCGATGTTC+AGG | - | chr4.1:67584777-67584796 | None:intergenic | 50.0% | |
| TCCTGAACATCGCAAGTGGA+TGG | + | chr4.1:67584773-67584792 | MS.gene48626:CDS | 50.0% | |
| !! | CACCCATCTGGTTTCCCTTT+TGG | - | chr4.1:67585886-67585905 | None:intergenic | 50.0% |
| AAGGCCTTCGGTTATGCCAG+TGG | + | chr4.1:67585028-67585047 | MS.gene48626:CDS | 55.0% | |
| CCACGGTGAACAAAGGCCTT+CGG | + | chr4.1:67585016-67585035 | MS.gene48626:CDS | 55.0% | |
| GCCATGTTCAAGGTGCGTAG+TGG | + | chr4.1:67585602-67585621 | MS.gene48626:CDS | 55.0% | |
| GGAGTAGCCACGGTGAACAA+AGG | + | chr4.1:67585009-67585028 | MS.gene48626:CDS | 55.0% | |
| CCGAAGGCCTTTGTTCACCG+TGG | - | chr4.1:67585019-67585038 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 67584765 | 67586424 | 67584765 | ID=MS.gene48626 |
| chr4.1 | mRNA | 67584765 | 67586424 | 67584765 | ID=MS.gene48626.t1;Parent=MS.gene48626 |
| chr4.1 | exon | 67584765 | 67585049 | 67584765 | ID=MS.gene48626.t1.exon1;Parent=MS.gene48626.t1 |
| chr4.1 | CDS | 67584765 | 67585049 | 67584765 | ID=cds.MS.gene48626.t1;Parent=MS.gene48626.t1 |
| chr4.1 | exon | 67585521 | 67585670 | 67585521 | ID=MS.gene48626.t1.exon2;Parent=MS.gene48626.t1 |
| chr4.1 | CDS | 67585521 | 67585670 | 67585521 | ID=cds.MS.gene48626.t1;Parent=MS.gene48626.t1 |
| chr4.1 | exon | 67585826 | 67585933 | 67585826 | ID=MS.gene48626.t1.exon3;Parent=MS.gene48626.t1 |
| chr4.1 | CDS | 67585826 | 67585933 | 67585826 | ID=cds.MS.gene48626.t1;Parent=MS.gene48626.t1 |
| chr4.1 | exon | 67586014 | 67586424 | 67586014 | ID=MS.gene48626.t1.exon4;Parent=MS.gene48626.t1 |
| chr4.1 | CDS | 67586014 | 67586424 | 67586014 | ID=cds.MS.gene48626.t1;Parent=MS.gene48626.t1 |
| Gene Sequence |
| Protein sequence |
