AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49028

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49028.t1 MTR_7g056587 96.082 587 23 0 1 587 6 592 0.0 1169
MS.gene49028.t1 MTR_7g056587 95.897 585 24 0 3 587 22 606 0.0 1165
MS.gene49028.t1 MTR_7g056587 96.296 594 22 0 1 594 6 599 0.0 1159
MS.gene49028.t1 MTR_7g056587 96.277 591 22 0 4 594 1 591 0.0 1153
MS.gene49028.t1 MTR_7g056587 96.146 467 18 0 121 587 1 467 0.0 934
MS.gene49028.t1 MTR_3g117100 43.204 618 305 12 7 588 14 621 6.99e-166 486
MS.gene49028.t1 MTR_1g022480 44.850 602 301 10 14 588 20 617 1.87e-164 483
MS.gene49028.t1 MTR_1g022480 45.183 602 301 11 14 588 20 619 1.93e-164 483
MS.gene49028.t1 MTR_1g022480 44.335 609 301 11 14 588 20 624 7.19e-162 476
MS.gene49028.t1 MTR_4g070810 43.229 576 286 10 45 588 48 614 3.37e-154 456
MS.gene49028.t1 MTR_3g112150 42.808 584 306 10 9 583 4 568 9.41e-148 438
MS.gene49028.t1 MTR_5g021050 53.283 396 165 6 36 430 11 387 4.58e-147 434
MS.gene49028.t1 MTR_5g021050 53.283 396 165 6 36 430 11 387 8.83e-147 432
MS.gene49028.t1 MTR_8g076880 43.454 527 248 8 66 572 42 538 1.42e-141 422
MS.gene49028.t1 MTR_4g070720 42.857 574 276 12 14 571 12 549 6.56e-140 418
MS.gene49028.t1 MTR_8g071000 43.127 582 287 10 41 589 33 603 6.15e-139 417
MS.gene49028.t1 MTR_1g022480 45.168 507 250 8 106 588 31 533 7.27e-139 414
MS.gene49028.t1 MTR_3g010190 59.942 342 135 2 7 346 5 346 7.50e-138 411
MS.gene49028.t1 MTR_3g117090 41.087 589 289 13 21 589 18 568 1.19e-133 402
MS.gene49028.t1 MTR_3g117090 41.815 562 269 13 21 562 18 541 3.87e-132 397
MS.gene49028.t1 MTR_4g070790 53.184 267 125 0 80 346 61 327 1.34e-104 321
MS.gene49028.t1 MTR_6g015645 64.851 202 71 0 139 340 8 209 2.28e-97 305
MS.gene49028.t1 MTR_5g012460 44.277 332 175 4 16 344 32 356 3.93e-96 301
MS.gene49028.t1 MTR_4g070780 48.188 276 112 4 66 341 26 270 5.08e-83 266
MS.gene49028.t1 MTR_4g070730 42.553 329 143 6 66 393 32 315 5.04e-78 252
MS.gene49028.t1 MTR_6g034285 51.515 99 48 0 139 237 195 293 8.38e-26 110
MS.gene49028.t1 MTR_3g098530 29.699 266 140 10 67 315 29 264 5.27e-21 93.6
MS.gene49028.t1 MTR_3g060670 29.876 241 144 6 98 327 26 252 3.72e-19 89.7
MS.gene49028.t1 MTR_2g027140 29.439 214 135 5 103 310 38 241 9.81e-19 88.2
MS.gene49028.t1 MTR_8g096170 31.048 248 143 11 71 313 21 245 7.58e-15 75.1
MS.gene49028.t1 MTR_8g095360 27.650 217 138 6 104 313 182 386 8.15e-14 74.7
MS.gene49028.t1 MTR_2g027140 28.061 196 125 5 121 310 1 186 1.76e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49028.t1 AT3G24840 55.461 586 221 13 6 581 5 560 0.0 618
MS.gene49028.t1 AT3G24840 55.461 586 221 13 6 581 5 560 0.0 618
MS.gene49028.t1 AT3G24840 55.461 586 221 13 6 581 5 560 0.0 618
MS.gene49028.t1 AT3G24840 55.631 586 219 14 6 581 5 559 0.0 616
MS.gene49028.t1 AT3G24840 55.631 586 219 14 6 581 5 559 0.0 616
MS.gene49028.t1 AT3G24840 55.631 586 219 14 6 581 5 559 0.0 616
MS.gene49028.t1 AT3G24840 55.631 586 219 14 6 581 5 559 0.0 616
MS.gene49028.t1 AT4G39170 43.537 588 298 10 7 571 14 590 4.09e-160 471
MS.gene49028.t1 AT4G39170 43.515 586 299 9 7 571 14 588 2.76e-159 469
MS.gene49028.t1 AT2G21520 40.813 615 317 10 7 583 18 623 5.53e-156 462
MS.gene49028.t1 AT2G21520 40.813 615 317 10 7 583 18 623 5.53e-156 462
MS.gene49028.t1 AT2G21520 40.850 612 321 10 7 583 14 619 9.86e-156 461
MS.gene49028.t1 AT4G36490 42.606 568 268 11 26 576 5 531 3.20e-152 449
MS.gene49028.t1 AT2G21540 42.681 567 265 10 15 568 10 529 1.08e-151 447
MS.gene49028.t1 AT2G21540 42.681 567 265 10 15 568 10 529 1.08e-151 447
MS.gene49028.t1 AT2G21540 42.681 567 265 10 15 568 10 529 1.08e-151 447
MS.gene49028.t1 AT2G21540 42.681 567 265 10 15 568 10 529 1.08e-151 447
MS.gene49028.t1 AT1G55690 43.829 632 292 14 4 585 1 619 7.59e-151 448
MS.gene49028.t1 AT1G55690 43.691 634 294 14 4 587 1 621 3.28e-150 447
MS.gene49028.t1 AT1G55690 43.691 634 294 14 4 587 1 621 3.28e-150 447
MS.gene49028.t1 AT1G55690 43.691 634 294 14 4 587 1 621 3.28e-150 447
MS.gene49028.t1 AT1G55690 43.691 634 294 14 4 587 1 621 3.28e-150 447
MS.gene49028.t1 AT2G21540 43.292 559 267 9 15 568 10 523 4.05e-150 443
MS.gene49028.t1 AT2G21540 43.292 559 267 9 15 568 10 523 4.05e-150 443
MS.gene49028.t1 AT2G18180 42.424 561 258 12 36 576 19 534 8.74e-150 442
MS.gene49028.t1 AT2G18180 42.424 561 258 12 36 576 19 534 1.08e-149 443
MS.gene49028.t1 AT4G39180 42.408 573 288 11 10 576 5 541 2.37e-148 439
MS.gene49028.t1 AT4G39180 42.408 573 288 11 10 576 5 541 2.37e-148 439
MS.gene49028.t1 AT4G39180 42.583 573 288 11 10 576 5 542 3.31e-148 439
MS.gene49028.t1 AT4G34580 41.607 560 299 9 21 576 7 542 5.25e-141 421
MS.gene49028.t1 AT4G34580 41.607 560 299 9 21 576 7 542 5.25e-141 421
MS.gene49028.t1 AT5G56160 42.958 568 295 11 23 577 15 566 6.42e-141 421
MS.gene49028.t1 AT5G56160 42.958 568 295 11 23 577 15 566 6.42e-141 421
MS.gene49028.t1 AT1G75370 41.254 606 312 12 7 583 14 604 6.20e-137 412
MS.gene49028.t1 AT1G75370 41.254 606 312 12 7 583 14 604 6.91e-136 411
MS.gene49028.t1 AT2G18180 42.455 497 226 9 100 576 7 463 5.65e-135 402
MS.gene49028.t1 AT2G18180 42.455 497 226 9 100 576 7 463 9.48e-135 402
MS.gene49028.t1 AT1G19650 38.731 599 321 8 14 582 18 600 2.30e-133 403
MS.gene49028.t1 AT2G16380 40.463 561 303 9 23 582 9 539 7.59e-129 389
MS.gene49028.t1 AT2G16380 40.463 561 303 9 23 582 9 539 7.59e-129 389
MS.gene49028.t1 AT5G56160 44.681 470 238 9 23 480 15 474 6.22e-128 385
MS.gene49028.t1 AT1G19650 55.521 326 142 3 14 339 18 340 6.44e-128 383
MS.gene49028.t1 AT2G18180 41.597 476 218 9 121 576 1 436 1.09e-124 375
MS.gene49028.t1 AT1G19650 39.223 515 269 6 98 582 28 528 8.20e-119 363
MS.gene49028.t1 AT2G16380 40.821 463 244 8 121 582 1 434 2.16e-105 325
MS.gene49028.t1 AT5G47510 49.421 259 131 0 78 336 26 284 4.27e-92 287
MS.gene49028.t1 AT5G47510 49.421 259 131 0 78 336 25 283 8.46e-92 288
MS.gene49028.t1 AT5G47510 49.421 259 131 0 78 336 26 284 9.41e-92 288
MS.gene49028.t1 AT5G47510 49.558 226 114 0 111 336 2 227 5.14e-81 258
MS.gene49028.t1 AT5G47730 28.571 245 154 6 78 310 6 241 1.62e-19 90.9
MS.gene49028.t1 AT5G47730 28.571 245 154 6 78 310 6 241 1.62e-19 90.9
MS.gene49028.t1 AT1G55840 30.081 246 149 7 78 310 6 241 4.40e-19 89.0
MS.gene49028.t1 AT1G55840 29.545 220 139 5 98 310 4 214 9.22e-18 84.7
MS.gene49028.t1 AT5G47730 28.718 195 125 4 121 310 1 186 2.02e-15 77.4
MS.gene49028.t1 AT5G47730 28.718 195 125 4 121 310 1 186 2.02e-15 77.4
MS.gene49028.t1 AT1G01630 31.604 212 120 9 106 313 55 245 8.40e-15 75.1

Find 120 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGTATATACAATTATTT+TGG 0.177223 7.3:+47935979 None:intergenic
CACTCATCCTCGGAGGTTTC+AGG 0.193320 7.3:+47938025 None:intergenic
GCAACAAAGCCAACGAAATT+TGG 0.209682 7.3:-47935534 MS.gene49028:CDS
ACATAGGAAATTAGCTTCTT+TGG 0.223417 7.3:+47931618 None:intergenic
TGACTGATGATTCTGGTTTC+AGG 0.239224 7.3:-47938094 None:intergenic
TTGGCAGAGGTTGCGGGATT+TGG 0.245490 7.3:-47931412 MS.gene49028:CDS
TCCCGCAACCTCTGCCAAAT+TGG 0.260370 7.3:+47931417 None:intergenic
CGGATATAAAAGAGCCAATT+TGG 0.270344 7.3:-47931431 MS.gene49028:CDS
AGATGAGAGGAGTAGAAGTT+TGG 0.288981 7.3:-47938050 MS.gene49028:CDS
ATCAACATCACCAACTTCTT+TGG 0.298243 7.3:+47933521 None:intergenic
ATTCACAGCTTCTTCCTCTT+TGG 0.304303 7.3:+47937865 None:intergenic
TAGCATGGTCACTCATAAAT+TGG 0.316701 7.3:-47935469 MS.gene49028:intron
GTTCCAGAGCAGATTGTTAG+AGG 0.330860 7.3:-47935874 MS.gene49028:CDS
CCAAGACATCCTCCATCATT+TGG 0.336385 7.3:+47935713 None:intergenic
GCCAATTTGGCAGAGGTTGC+GGG 0.336971 7.3:-47931418 MS.gene49028:CDS
GAGTCGTTGAGTCGTATAAA+AGG 0.338314 7.3:-47931321 MS.gene49028:CDS
TTCTCACGAGGAATTGTTCT+CGG 0.353462 7.3:+47931360 None:intergenic
ATGGCTTCTTGGTTGGTTGT+TGG 0.366905 7.3:+47931503 None:intergenic
GTTATCGTGACTGATGATTC+TGG 0.375473 7.3:-47938101 None:intergenic
TATGTAGGATTTCGTATATA+AGG 0.388118 7.3:-47936936 MS.gene49028:intron
CTCCATTGGAGAAAGGAGTA+TGG 0.389408 7.3:-47937208 MS.gene49028:CDS
CAACTTCCACCCAGAAAATC+AGG 0.390012 7.3:+47935743 None:intergenic
GTAGTGGGTTCAAGCTAGTA+TGG 0.398113 7.3:-47936039 MS.gene49028:CDS
GTCTCAGGAAGCGTAATAAA+CGG 0.400353 7.3:-47937937 MS.gene49028:CDS
GGAGCATATCTGCCCACATC+TGG 0.403184 7.3:+47937227 None:intergenic
GTGACATTCATCAACTTGAT+AGG 0.405206 7.3:+47936818 None:intergenic
GTTGCTTCTGACGTTGATCC+AGG 0.406245 7.3:+47935312 None:intergenic
CAGCTCACATTCTCGCTAGA+AGG 0.408987 7.3:+47935258 None:intergenic
ATGATGTCATACTTTCGAAA+TGG 0.415030 7.3:+47935661 None:intergenic
AGCCAATTTGGCAGAGGTTG+CGG 0.415753 7.3:-47931419 MS.gene49028:CDS
AGCTGAGCTTGCTGAGTCAC+TGG 0.422989 7.3:-47931019 MS.gene49028:CDS
TTCATTGTCAATGCTGGTAG+TGG 0.424448 7.3:-47936055 MS.gene49028:CDS
CAAGACATCCTCCATCATTT+GGG 0.424664 7.3:+47935714 None:intergenic
AGTCTCGAGCTAGATCTCTT+AGG 0.425872 7.3:-47937997 MS.gene49028:CDS
CAGCATTGACAATGAACATC+TGG 0.433020 7.3:+47936062 None:intergenic
AACAATAATGCCAAAGAAGT+TGG 0.444155 7.3:-47933531 MS.gene49028:CDS
AAAATTTGACATTGATAAAA+CGG 0.445534 7.3:-47937251 MS.gene49028:CDS
GCATTGTGTGATAATTATCA+TGG 0.445665 7.3:+47937798 None:intergenic
TGATAATTATCATGGGAATC+TGG 0.446600 7.3:+47937806 None:intergenic
AGAAGCTAATTTCCTATGTC+AGG 0.450183 7.3:-47931614 MS.gene49028:CDS
CTAGTATGGAATACAGCAAA+AGG 0.461742 7.3:-47936025 MS.gene49028:CDS
CATTATTGTTTGCCTCAACT+AGG 0.466176 7.3:+47933544 None:intergenic
CTCCATACTCCTTTCTCCAA+TGG 0.473262 7.3:+47937206 None:intergenic
TATGTAGTATTTGCAGCACT+TGG 0.477817 7.3:-47931549 MS.gene49028:CDS
GCAGAGGTTGCGGGATTTGG+AGG 0.478420 7.3:-47931409 MS.gene49028:CDS
AACAATTCCTCGTGAGAAAG+AGG 0.480731 7.3:-47931355 MS.gene49028:CDS
ATGATTCTGGTTTCAGGAGA+GGG 0.485833 7.3:-47938088 MS.gene49028:CDS
AGAAGGAACTGATTGCATAA+AGG 0.486246 7.3:+47935275 None:intergenic
AGCTGTGAATTCATTTAGAC+TGG 0.489026 7.3:-47937852 MS.gene49028:CDS
TCTCAGGAAGCGTAATAAAC+GGG 0.492189 7.3:-47937936 MS.gene49028:CDS
GAAGAACTTCCAAATTTCGT+TGG 0.502786 7.3:+47935525 None:intergenic
TAACCTCTAACAATCTGCTC+TGG 0.504827 7.3:+47935871 None:intergenic
CAAGACTCACTTATAGTCTC+AGG 0.512332 7.3:-47937952 MS.gene49028:CDS
ACTGATTGCATAAAGGTTGA+AGG 0.514862 7.3:+47935282 None:intergenic
GAGAGCTGGATGCCACCGGC+TGG 0.516024 7.3:+47931472 None:intergenic
GCCTCAACTAGGTTGCAGAT+AGG 0.516350 7.3:+47933555 None:intergenic
CACCCAGAAAATCAGGAAGT+TGG 0.516687 7.3:+47935750 None:intergenic
CAGATGTTCATTGTCAATGC+TGG 0.517230 7.3:-47936061 MS.gene49028:CDS
CCAAATGATGGAGGATGTCT+TGG 0.520026 7.3:-47935713 MS.gene49028:CDS
TTGATAAAACGGTCCAGATG+TGG 0.520171 7.3:-47937240 MS.gene49028:CDS
TGTTAGAGGTTATAGACTCA+TGG 0.523254 7.3:-47935860 MS.gene49028:intron
TTGGATCTAACAAGGGACCT+TGG 0.533848 7.3:-47935694 MS.gene49028:CDS
AATTTATGAGTGACCATGCT+AGG 0.540881 7.3:+47935471 None:intergenic
CCAGTGTATATTGAGAGACT+TGG 0.541011 7.3:-47936851 MS.gene49028:CDS
GGTTAATTGATTGAGAGAGC+TGG 0.546632 7.3:+47931458 None:intergenic
AGACTTCCGCCACTCATCCT+CGG 0.549948 7.3:+47938015 None:intergenic
CGTATATAAGGAGTTTGAAG+AGG 0.552893 7.3:-47936924 MS.gene49028:CDS
AGTTGTTCATGCCCAAATGA+TGG 0.558876 7.3:-47935725 MS.gene49028:CDS
TGTGGGCAGATATGCTCCAT+TGG 0.561517 7.3:-47937222 MS.gene49028:CDS
TAAAAGAGCCAATTTGGCAG+AGG 0.562927 7.3:-47931425 MS.gene49028:CDS
GTTCAGCGTTATTACCCTCA+TGG 0.565031 7.3:-47936902 MS.gene49028:CDS
TGTCATACTTTCGAAATGGA+AGG 0.569629 7.3:+47935665 None:intergenic
AGATATGCTCCATTGGAGAA+AGG 0.571324 7.3:-47937215 MS.gene49028:CDS
AACACTGAAATATCTGAACC+TGG 0.573828 7.3:-47935330 MS.gene49028:CDS
TAATAGTTCAAGAAGATGAG+AGG 0.575754 7.3:-47938063 MS.gene49028:CDS
TTTGCTGCTATAGAACATGC+AGG 0.579513 7.3:+47936731 None:intergenic
TTCCTATGTCAGGAGTACAT+TGG 0.581773 7.3:-47931604 MS.gene49028:CDS
TTAATGCTACAGGTTTCTGA+AGG 0.583106 7.3:-47937278 MS.gene49028:intron
TGATAAAACGGTCCAGATGT+GGG 0.584450 7.3:-47937239 MS.gene49028:CDS
ACCTATCTGCAACCTAGTTG+AGG 0.587036 7.3:-47933556 MS.gene49028:CDS
TATTACCCTCATGGTATGCA+TGG 0.591911 7.3:-47936893 MS.gene49028:CDS
GATGATTCTGGTTTCAGGAG+AGG 0.596545 7.3:-47938089 MS.gene49028:CDS
CATTGTGTGATAATTATCAT+GGG 0.600169 7.3:+47937799 None:intergenic
GTCATACTTTCGAAATGGAA+GGG 0.600302 7.3:+47935666 None:intergenic
TCATTGTCAATGCTGGTAGT+GGG 0.602158 7.3:-47936054 MS.gene49028:CDS
CTGAAACCTCCGAGGATGAG+TGG 0.603268 7.3:-47938024 MS.gene49028:CDS
GAAATGGAAGGGTCATTCCA+AGG 0.607226 7.3:+47935677 None:intergenic
TTGAGAGAGCTGGATGCCAC+CGG 0.608136 7.3:+47931468 None:intergenic
TGCATGGTGTGGACAAAGAG+GGG 0.609270 7.3:-47936877 MS.gene49028:CDS
TGACTTGCAAAAGACAAGGA+AGG 0.610536 7.3:-47931289 MS.gene49028:intron
ATGCATGGTGTGGACAAAGA+GGG 0.611322 7.3:-47936878 MS.gene49028:CDS
AGGATGTCTTGGATCTAACA+AGG 0.613016 7.3:-47935702 MS.gene49028:CDS
ATCCAATGTACTCCTGACAT+AGG 0.617075 7.3:+47931602 None:intergenic
CCAAGTCTCTCAATATACAC+TGG 0.623189 7.3:+47936851 None:intergenic
AGATGTTCGGGATGCCAAAG+AGG 0.626648 7.3:-47937879 MS.gene49028:CDS
CCCTCATGGTATGCATGGTG+TGG 0.629363 7.3:-47936888 MS.gene49028:CDS
CACCGAGTCATATCCTAGCA+TGG 0.636928 7.3:-47935484 MS.gene49028:CDS
AAGCCATCAGAAAATCCAGC+CGG 0.639669 7.3:-47931487 MS.gene49028:CDS
TATGCATGGTGTGGACAAAG+AGG 0.640193 7.3:-47936879 MS.gene49028:CDS
GACCATGCTAGGATATGACT+CGG 0.641917 7.3:+47935482 None:intergenic
AGAATATCCTCTTTCTCACG+AGG 0.648401 7.3:+47931348 None:intergenic
TTGCTGCTATAGAACATGCA+GGG 0.661177 7.3:+47936732 None:intergenic
ATAATTATCACACAATGCTG+AGG 0.661865 7.3:-47937793 MS.gene49028:intron
CCACACCATGCATACCATGA+GGG 0.664021 7.3:+47936888 None:intergenic
CTAGGTTGCAGATAGGTGCA+CGG 0.665393 7.3:+47933562 None:intergenic
GGAGGCAGTAGTGACTGAGA+TGG 0.665960 7.3:-47931391 MS.gene49028:CDS
CATGTTCTATAGCAGCAAAG+CGG 0.666814 7.3:-47936727 MS.gene49028:CDS
ACTACAATAATTGATGTGCA+CGG 0.666903 7.3:-47936689 MS.gene49028:CDS
CTTCCGCCACTCATCCTCGG+AGG 0.672856 7.3:+47938018 None:intergenic
CCATCAGAAAATCCAGCCGG+TGG 0.673635 7.3:-47931484 MS.gene49028:CDS
AATTTGACTTGCAAAAGACA+AGG 0.678812 7.3:-47931293 MS.gene49028:CDS
TCTCAATCAATTAACCACCC+CGG 0.683871 7.3:-47931451 MS.gene49028:CDS
TCCACACCATGCATACCATG+AGG 0.688993 7.3:+47936887 None:intergenic
AATAATTGATGTGCACGGCG+TGG 0.689010 7.3:-47936684 MS.gene49028:intron
GGATGTCTTGGATCTAACAA+GGG 0.691292 7.3:-47935701 MS.gene49028:CDS
AAACCTCCGAGGATGAGTGG+CGG 0.701273 7.3:-47938021 MS.gene49028:CDS
ATGGTGTGGACAAAGAGGGG+CGG 0.702284 7.3:-47936874 MS.gene49028:CDS
TGTTCATGCCCAAATGATGG+AGG 0.726201 7.3:-47935722 MS.gene49028:CDS
TGATGGTGATAATTACCCTG+AGG 0.740202 7.3:-47936521 MS.gene49028:intron
TTTGGAGCCTGAAACCTCCG+AGG 0.748197 7.3:-47938032 MS.gene49028:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.3 gene 47930960 47938110 47930960 ID=MS.gene49028
chr7.3 mRNA 47930960 47938110 47930960 ID=MS.gene49028.t1;Parent=MS.gene49028
chr7.3 exon 47937794 47938110 47937794 ID=MS.gene49028.t1.exon1;Parent=MS.gene49028.t1
chr7.3 CDS 47937794 47938110 47937794 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47937189 47937288 47937189 ID=MS.gene49028.t1.exon2;Parent=MS.gene49028.t1
chr7.3 CDS 47937189 47937288 47937189 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47936685 47936951 47936685 ID=MS.gene49028.t1.exon3;Parent=MS.gene49028.t1
chr7.3 CDS 47936685 47936951 47936685 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47936522 47936599 47936522 ID=MS.gene49028.t1.exon4;Parent=MS.gene49028.t1
chr7.3 CDS 47936522 47936599 47936522 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47935991 47936092 47935991 ID=MS.gene49028.t1.exon5;Parent=MS.gene49028.t1
chr7.3 CDS 47935991 47936092 47935991 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47935861 47935910 47935861 ID=MS.gene49028.t1.exon6;Parent=MS.gene49028.t1
chr7.3 CDS 47935861 47935910 47935861 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47935673 47935772 47935673 ID=MS.gene49028.t1.exon7;Parent=MS.gene49028.t1
chr7.3 CDS 47935673 47935772 47935673 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47935470 47935574 47935470 ID=MS.gene49028.t1.exon8;Parent=MS.gene49028.t1
chr7.3 CDS 47935470 47935574 47935470 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47935266 47935358 47935266 ID=MS.gene49028.t1.exon9;Parent=MS.gene49028.t1
chr7.3 CDS 47935266 47935358 47935266 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47933514 47933598 47933514 ID=MS.gene49028.t1.exon10;Parent=MS.gene49028.t1
chr7.3 CDS 47933514 47933598 47933514 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47931290 47931669 47931290 ID=MS.gene49028.t1.exon11;Parent=MS.gene49028.t1
chr7.3 CDS 47931290 47931669 47931290 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
chr7.3 exon 47930960 47931067 47930960 ID=MS.gene49028.t1.exon12;Parent=MS.gene49028.t1
chr7.3 CDS 47930960 47931067 47930960 ID=cds.MS.gene49028.t1;Parent=MS.gene49028.t1
Gene Sequence

>MS.gene49028

ATGATTCTGGTTTCAGGAGAGGGATTAATAGTTCAAGAAGATGAGAGGAGTAGAAGTTTGGAGCCTGAAACCTCCGAGGATGAGTGGCGGAAGTCTCGAGCTAGATCTCTTAGGAGAAGAGCAATGACTGCTTCAACAAGACTCACTTATAGTCTCAGGAAGCGTAATAAACGGGTAGCAGATTATCAATTTGATTCAATTTTTATAGAAGATGTTCGGGATGCCAAAGAGGAAGAAGCTGTGAATTCATTTAGACTGGCATTACTTACAAGAGATCTGCTTCCAGATTCCCATGATAATTATCACACAATGCTGAGGTAATTCGTCTGACTGAAATTAAATTTACTTCTCATTTGGTAGCTTAATTTTATCACTACAAATAAATTTAAATATCATTGGTTATGCTGTTTGGATCTCATTGATTCAAATTTTAAAGGTACAATTGTTTATTTTATGTTAGTCATGGAGAATTAATCACACAAAGGTGCAACTTGAAGCACATTTCTGGAGAGACATTATAGTTTCTGCCTCTCTTCAATATGATTTTTCTTTCACATTGGAGTATTTTTTTTTTTTTTTGATAGAAAGTATTCTTTCTTTTTTAACATAGGGTTGGAACACAATTTAATCTAATGAATTATTTATCAAGATTCCCATTCTTTGATATTTTAAAACTTTTTCCAGAAACTTCTGTCAAGGAGAATTGATTTTTTTTAACAAGGCGAGTAGAATTAAAAATAAAAAAATTATACTAGTTTTCTGCAAAAATAAATTCTTTACACATGTAGTATATTACAGGCTGCTGCTGGTTTAATGCTACAGGTTTCTGAAGGCCAGAAAATTTGACATTGATAAAACGGTCCAGATGTGGGCAGATATGCTCCATTGGAGAAAGGAGTATGGAGCAGACTCTATTTTACAGGTAAAGTTTGGTAGTAGTTGGTTTTCCCTTTACTTAATAGGGAAGCTTGTCTTTACTTATTTGTGCACAGAGATTGTAAGAGCTTATTTGAGTTTTCAACTCGAAACAGCCACCCAAAGCAAGTAGTTGTAGTGAGGGAAAATCTAACAGGAGATTTTTCCAAATATTATATGTTTGATTAGGAATTATTTTAAACTTTTCATCTGAAGGAACACTAAAACAATAAATAATATGTAGGATTTCGTATATAAGGAGTTTGAAGAGGTTCAGCGTTATTACCCTCATGGTATGCATGGTGTGGACAAAGAGGGGCGGCCAGTGTATATTGAGAGACTTGGCAAAGTTGATCCTATCAAGTTGATGAATGTCACCACAATAGATCGATTTTTAAGATATCATGTTCAGGGATTTGAAAAATTGTTTCAAGAGAAATTCCCTGCATGTTCTATAGCAGCAAAGCGGCACATAGATAAAACAACTACAATAATTGATGTGCACGGCGTGGTAAATTCTATGCTTATAACAACATTTCAGAATAGCCTACACTCAGTCGAAATCGAAGTTTATTGTTACTTTCTATATTTTTCAGAATTGGTTGAGCTTTAGCAAAATTGCACATGAACTTGTTATGCGCATGCAAAAAATTGATGGTGATAATTACCCTGAGGTAACTAAATGTTGTAGTATGTTTAATTTGACTTGCTAAGAACATCATAGTAGTGATCTTTTAAATTGGCAATCTCAATTATTCAATTCCGAGATTCTTAAAATGATTAAGAAGAAAGAAAGTATGCAAGTAGTTTCTATTCATGATAGCTAAAAAATGCAATTTTGTACAAATTAGGGTTGTATGTTTCTATGTTCCTACTAAGTTCAGTGTTCATGTTTCTTTTGTCATTATACAATTCATATTTGTCATGCATATGTTGACATGGGTGCATGCATGTATGTGCACTCAAATACATGTCAAAAAGGAACCTGAATTAGGGATAGAAATCATACAATGCATTGTACCCTTGCTGCAAAATGAAAGTTGCATTTGGTAATTTTGGTATACAGACGTTGTGCACTTCTGAATGTGCTCTTCTTTTTCCAGACATTAAACCAGATGTTCATTGTCAATGCTGGTAGTGGGTTCAAGCTAGTATGGAATACAGCAAAAGGATTTCTTGATCCGAAGACCACAGCCAAAATAATTGTATATACTTTCTTTCTGTGCTTTGATTTGACTTTAGAAAGGAATGAGAAGAGTCTAAATGATTCATGCTGGATTTACAGGTTTTGGGCAACAAGTTCCAGAGCAGATTGTTAGAGGTTATAGACTCATGGTTTGTGTTATTTTTTCACTGTCTCAGCTAATTAACTGCTTCTATGTCTGCAATAATGAATATTTTACAAGCGTTTCCTTTTGAACAGCCAACTTCCTGATTTTCTGGGTGGAAGTTGTTCATGCCCAAATGATGGAGGATGTCTTGGATCTAACAAGGGACCTTGGAATGACCCTTCCATTTCGAAAGTATGACATCATTAAGAGTCTTGCTCCTGCATTTGTTTGAATTCTATCAAGAATTACTGCTCAAACCTACAGCTAATACTCCCTTGTGCTATGTACAGTTGTTAAACTCTAGAGAAGCAACAAAGCCAACGAAATTTGGAAGTTCTTCTGTTGCTGATAGATTAGACACCGAGTCATATCCTAGCATGGTCACTCATAAATTGGTAAAGTTTGAGTCCAGTATTCTTTTTTTTTTTTTTTTTGTCCAGTTCGCGAGTCATATTCGTGCTGTTTTTGCATGATGTGAAGCTTTACTCATGACTATTTCTTCACAGGTTACAAACACTGAAATATCTGAACCTGGATCAACGTCAGAAGCAACATTGATTCCTTCAACCTTTATGCAATCAGTTCCTTCTAGCGAGAATGTGAGCTGTCTTTCTATTTTCTTGTTCAAGTGTTTTATCTTTTTTTACATGTAGAAGTTATAGGGTTCAGGTATAGAGAGTAGAAAAAAGGATACTAAGAATTATAAAATTGGGGAAATGCTAGAATCAAATTCTTTCCAAATACTCACTTGTTGGGAGAAGTTTATGTGGATCCCATTCCCTATTTGGTGGGACAAACTACCATATTCGTGGGACCCACATGAATTTCACCAGAGAATGAAGAATATGTTGGATGGTGGTGGTGTTGGCATTTTTCATTTATATCATATAATGTGAGTGGTATGCTGCATTTTATTATAGAAGACAAAGGATTAATCTTTATTTATTCCAATTCTACTGTTAATCCTCTTCAATTAATCATGATATTTAAAGACATATGAAAATCAATCCGAAGAGAGTAAGAGGTAACTTGTTAAAGAAATATGTAAATGGTATGCTAGCATATGTTAAATATTTTATGATGAAGTAATATTTTATGAAACCTGGACACTAACATGAACACCAAATAAAACACTGACATATGCAATGTCTAAAATATAGGACGTACACTCACATGTGCATATACATGTAAATATAGGAAGCGTAATGGTTGTGATCATGAGCGGAATTAATCTCGACCGTTCACTTGTAGTTGTATGGTGAAGCTTATCTCCTCGCATATACATATACCCACTTCATACAACAACAACTAAGCCGTATCCCACTAAGTGGGGTCAGCTACATGGATCAAATTACTTCATAGTGTTCTATCATAAACAATATTTTGAGCACAAAGGTACCATAATGTAAGGGGTGTGTGTAAAAGAAATTTGACAATCAGTCCATATTTGCTTAATTTTGAAAGTAAAAGGATTTGGTTTACTCAAAAAATATTGGAGGTCCAAAATCACACACACTACAAATTAGAAGGATCAAAAGTGTTATTAATTTTTTTTTTCTCTTGGAACATCAAGCTTTCACATTTTATTTTTATCTAGAGTTTCTCTAAATAAAGTAGATAGTTAGCGAAACACTTCATGGGTTCCATCAACACTAGCTAAAGTCTGTCATTTTTGTCATGAAAATATTGGTCGGGATACTTTTGTTGCGAAATTAAAAATTTGAGGATACTAACACCAAGATAAAGAAGTCAAACATAATTGGAAGTTTGTATGATATTTAATTTTTTTTCTTAAATTTTAATAAATTGGCAGGGAATTTGAGGCCTTTTTTGGCCCTACACCAACTTCGGCTTCCATAAAGGTTGATGGAAATATGATCGTCAAATACCATAGTTACCAAATTTTGAACTTAATGGAAAGAACGAAAAAGTTTTGGAATAAAATAAAACTGAAAGTCAATATAATCTTCAATACTAAATAGATAGTTAAAATTCAGTTTTCTGTAAAAAAAAAAAAATAAAACTGGTGTACGGGGAAATTTTTATGAATTAAAGTGGCACCAATAGGCCTTTTACGACTGTCCTCAAGGGGACTCGAACTCAACACCTTGAGATTACAAGGCTAGGCTCTAACCACTGAGCTAGCACCTAAATGTAATTTTCAGTCATTTGTATTTACAGTTTTGCATAATATTAGTTTATATTGTCACATTGTTTATAATATTGAATAACTGCAACTCATGTATGATATGGAATTATATTGCAGAAAAGGATGAGAGACCGTGCACCTATCTGCAACCTAGTTGAGGCAAACAATAATGCCAAAGAAGTTGGTGATGTTGATTTATCAAGTACGTCATCCAAAATCATGCGTATTATAATTATGGATTTTTTTTTTTTTTTTACTAAAGGTTTGTGTTTTATTATGTTAAGTTCCCAAAATATGGTAAAGTTTGGTTTTAGTTCCTAAACTTTAAAAAATATATATTTTTTCTCCTTTATTTCTTAAAATGTACTATTCGTGGTCCACTGCTCCTTGTTTTGAACTTTGTCTTATTAATTTTTGACGTTTCAAATGGAGTGCCACCTTAGTTTTGTTCACATAGCCAAAAATACTTATTGGCCGCAGATGTGTTTAAAAATGCCTCCACCTCACCAGTCCAAGTCATTTCTGCAATATACCCAATTGAAAACGAAATCCTACTCTTCCTTGTTTGTTTTCCTTCCTCGTCAATCCAACAGAATCCTAATATTACCCGTCAGAGTTTGCGCAGGCCCAGTAGTGATAGAATCACCAGTTTGAGCCTTCATTGGATCAATATTCTCAATCAAACAAATAATAACTACATTATCAACTAAATCCCTCTTAACCTCAAGCTCATATTCTTTCTAATCAAAGAATTTCAATCAAAACTTGATTGGTGATGTTAACACCCAACCTGGCTTAGAAAATTTCCGCCGAACCTTTTCTTGTGGAGGTCGGACTCCCGACCAACAGAAACTGTCCAATTTTGTTTTTACATGGAGGCACTCTTTGAGGTTGGTTCTAATACCAGAAGGTGGGGTTTTAATCCCATTATTCGTCTTGGTTTGTTTGAACAAATTGTTGTCCTCATCTTTCTTAATGGCTCTGAGTTCCTCCCTTATGAGCTCCATTTCGTATTTCTACAATGCGCCGCTCTCCGCAAATGCTACAATGAGATTGAGTGTTGTATGGCAACCCATGGTTGGAAAAAGGACGCCGATCGCTTTTATTCGAGAACCTGCTCCACCAAATGTCACGGTCATGATATAGGTCCTGCCAGCCATTTCGTCATCACATCGTTTCTTTCCTTCTGGGGAGACAAGGTTTGAGAATTAGTGTCCTTTCCCAACATTGGAGAACAATGCGGAAATACACTTCCCAGTTCCCACCTAAGCTTTGACCAGTCTTTGTTAGATCGACGAGGAAGAAGAAACAACATATGAAGAAGACTAGAGTTTCATTTTCAATTTGGTAAATTGGGGAAATGATGTGGCTTGGTGCGGTGGAGATGTTTTAAACGCATCACCGTCCACGGATATTATTTTCCCAAGTGTACAGGTCAGAGGTGTTACTCAATTTGACACTGAGCTGTTGATGAGATGGATTCCACAACGAGAACAATGAATAGTACATTTTAGGAAATGGAGAAAGAAAATATATTTTTTGAAGTCCAGAGATTACGACTGTACTTCATATTCTGGGGGACTAGTAATTAGTTAACCCTTTTACTTATCAGATGATGCTCTTGTTATGTGCTCTATATGATAATATTAGAACATGCGACATAACCTCATAGCCATCTTTGCTTACATGACTCGAGTCTGGAGAAAGTGAAAGGAGGAATTTGATGTTGTTCAAATTTATTTAGAAAACTATTTCACTTGGTCCAGTCTTAACCAAGTCATGTGAAACATGTTCCTAAGGCCGCCATATTTTCAGAATATTTTCAGAACAGAATGGAAATTATGGCTTTATATTTCTTTCTGTGCCAGAGACTTTTCTTTGGAAGTTCAGTTTTTATGCTCTGGAATATAGTATTCTTTGTTGCTTAAGTGACCTTATCTTACAACTTCATTAACTGTTTGAGCCACATTGACTTGTTTCCTTATCTAGTTACAAGAATTCCATATCCTGCACTAATTATACTTTGAAAAATGGTGCATCTGATAGGTGGTTCAAGCAACAATATTTCAAGACAACCAAAGAAGCTAATTTCCTATGTCAGGAGTACATTGGATCAAATCATAGTCAGAGTGTTAGCTTGTATATATGTAGTATTTGCAGCACTTGGAAATTTTTTTGTGGTTCGCTTTGCCAACAACCAACCAAGAAGCCATCAGAAAATCCAGCCGGTGGCATCCAGCTCTCTCAATCAATTAACCACCCCGGATATAAAAGAGCCAATTTGGCAGAGGTTGCGGGATTTGGAGGCAGTAGTGACTGAGATGGCTAATAAACCGAGAACAATTCCTCGTGAGAAAGAGGATATTCTTCAAGAGTCGTTGAGTCGTATAAAAGGAATAGAATTTGACTTGCAAAAGACAAGGAAGGTAGTGCCAGTCTCCTGTGATTAAGTTGATCCCTTTGAAGGACATAGTCCCTCCGGAATGAAATATAAGCAAAAGTGGTGGTTGAGAAGTCAGTGTATGTGGTTAAGAATTTCGTCCACATACATACTTTTCAAGTCCTTTTTGCTTATATTTCATTCCGGAGGGAGTATTGTTTAAAGAATTCACATTACTGTGTTGATTGAGTTTGCTTCTTAATTTTAGGCACTGCTTGCAACTGCTTCAAAGCAAGCTGAGCTTGCTGAGTCACTGGAAAGCTTAAAAGATAACAAATTTGATGTAAGTCGCTATTACCTCTCATCTCCAGTTTGA
Protein sequence

>MS.gene49028.t1

MILVSGEGLIVQEDERSRSLEPETSEDEWRKSRARSLRRRAMTASTRLTYSLRKRNKRVADYQFDSIFIEDVRDAKEEEAVNSFRLALLTRDLLPDSHDNYHTMLRFLKARKFDIDKTVQMWADMLHWRKEYGADSILQDFVYKEFEEVQRYYPHGMHGVDKEGRPVYIERLGKVDPIKLMNVTTIDRFLRYHVQGFEKLFQEKFPACSIAAKRHIDKTTTIIDVHGVNWLSFSKIAHELVMRMQKIDGDNYPETLNQMFIVNAGSGFKLVWNTAKGFLDPKTTAKIIVLGNKFQSRLLEVIDSCQLPDFLGGSCSCPNDGGCLGSNKGPWNDPSISKLLNSREATKPTKFGSSSVADRLDTESYPSMVTHKLVTNTEISEPGSTSEATLIPSTFMQSVPSSENKRMRDRAPICNLVEANNNAKEVGDVDLSSGSSNNISRQPKKLISYVRSTLDQIIVRVLACIYVVFAALGNFFVVRFANNQPRSHQKIQPVASSSLNQLTTPDIKEPIWQRLRDLEAVVTEMANKPRTIPREKEDILQESLSRIKGIEFDLQKTRKALLATASKQAELAESLESLKDNKFDVSRYYLSSPV