AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49039

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49039.t1 MTR_1g101620 96.575 1051 35 1 47 1096 3 1053 0.0 2102
MS.gene49039.t1 MTR_6g027620 37.766 985 509 23 138 1094 69 977 0.0 643
MS.gene49039.t1 MTR_4g076850 21.995 882 548 27 172 968 39 865 2.74e-33 140
MS.gene49039.t1 MTR_2g436760 23.801 563 350 18 401 939 415 922 2.71e-28 124
MS.gene49039.t1 MTR_2g436760 28.365 208 133 4 127 332 96 289 1.89e-15 82.0
MS.gene49039.t1 MTR_4g132500 22.910 873 463 32 133 870 68 865 5.13e-23 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49039.t1 AT1G14610 71.230 1008 278 4 82 1082 82 1084 0.0 1543
MS.gene49039.t1 AT5G16715 39.592 980 487 23 132 1088 60 957 0.0 652
MS.gene49039.t1 AT1G27160 56.875 160 57 3 851 1003 11 165 2.58e-53 185
MS.gene49039.t1 AT4G10320 22.273 880 544 28 173 968 40 863 1.46e-34 144
MS.gene49039.t1 AT5G49030 24.368 554 358 15 401 939 427 934 4.20e-32 136
MS.gene49039.t1 AT5G49030 26.522 230 147 6 111 332 87 302 7.31e-13 73.9
MS.gene49039.t1 AT5G49030 24.368 554 358 15 401 939 613 1120 4.68e-32 136
MS.gene49039.t1 AT5G49030 26.522 230 147 6 111 332 273 488 7.53e-13 73.9
MS.gene49039.t1 AT5G49030 24.368 554 358 15 401 939 427 934 5.79e-32 135
MS.gene49039.t1 AT5G49030 27.684 177 122 3 158 332 130 302 6.84e-13 73.9
MS.gene49039.t1 AT4G04350 25.690 471 231 13 138 511 78 526 6.78e-21 99.8

Find 289 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTGAAGCTGATCTTTC+TGG 0.115651 1.3:-70013942 MS.gene49039:CDS
TTTGGACATGCCTCGATTTA+AGG 0.131070 1.3:-70023085 MS.gene49039:CDS
GGAATCTTTCTGCCATTAAA+TGG 0.153103 1.3:+70023370 None:intergenic
TATGCTGTTCACCCATTTAA+TGG 0.188496 1.3:-70023382 MS.gene49039:CDS
ATGGCAACAGCTAGTTCTTT+AGG 0.206093 1.3:+70015347 None:intergenic
TACGACAAACCTGTTGAATT+TGG 0.241657 1.3:-70023547 MS.gene49039:CDS
AGTATCCACTGGCAGCTAAA+TGG 0.249493 1.3:+70015005 None:intergenic
CGCAAGATGTCCAAGTCTTT+GGG 0.270359 1.3:-70015452 MS.gene49039:CDS
CTGTCAGAGCATGGCCTATA+TGG 0.272526 1.3:+70026530 None:intergenic
CAAGCAACAAACGCTTCTTT+AGG 0.276874 1.3:+70013420 None:intergenic
CTTCTTCTTCTCGAGATCTT+CGG 0.281621 1.3:+70027247 None:intergenic
CAATCAGCCACATATTGTTT+TGG 0.283513 1.3:+70022200 None:intergenic
TTCTGCTCTCTTACATTCCC+TGG 0.286214 1.3:+70014704 None:intergenic
TCTGTTCCCTTTGACTGTAC+TGG 0.303531 1.3:-70015981 MS.gene49039:CDS
ACGCAAGATGTCCAAGTCTT+TGG 0.303673 1.3:-70015453 MS.gene49039:CDS
TGGCAACAGCTAGTTCTTTA+GGG 0.315037 1.3:+70015348 None:intergenic
CAGCTAAATGGGAGATTATC+TGG 0.323237 1.3:+70015017 None:intergenic
TTCTTCTTCTCGAGATCTTC+GGG 0.329085 1.3:+70027248 None:intergenic
AATCCGGGACCCTGACGTTC+TGG 0.330214 1.3:-70016023 MS.gene49039:CDS
AAGCAACAAACGCTTCTTTA+GGG 0.330590 1.3:+70013421 None:intergenic
GAAAGAAGTTTCATTTAATC+CGG 0.335331 1.3:-70016039 MS.gene49039:CDS
AGCAACCTCACCTTGCTAAA+AGG 0.336305 1.3:+70015830 None:intergenic
TGACATACCATGCAGGAATT+TGG 0.347409 1.3:+70016167 None:intergenic
CTACCACTGCTGTGTATTCT+TGG 0.350432 1.3:-70014917 MS.gene49039:CDS
AGACTTGGTTACTTTCGATA+TGG 0.352174 1.3:+70014965 None:intergenic
ATTCGTTGGCGACGAATGTC+TGG 0.352475 1.3:-70026409 MS.gene49039:CDS
TTGCAACAATTACGTCGATT+AGG 0.353940 1.3:-70025070 MS.gene49039:CDS
GCCAATGGTGCAATAAACTA+TGG 0.355090 1.3:-70015103 MS.gene49039:CDS
AGAATAGCATCACATATTAT+AGG 0.358451 1.3:+70023349 None:intergenic
TGTTCGTAACGTTTATCTTC+AGG 0.360246 1.3:+70023418 None:intergenic
TACCATTGTGGCTTTATCAT+TGG 0.361784 1.3:+70022299 None:intergenic
TCCATGTGCATCACGAATCA+TGG 0.362620 1.3:+70015475 None:intergenic
GTCCTTCTTCTGACCCTCTA+TGG 0.364359 1.3:+70015328 None:intergenic
GGATGATGTGCTGCAGGAAT+TGG 0.367935 1.3:-70016137 MS.gene49039:CDS
AAACGTTACGAACAATTTCA+TGG 0.369062 1.3:-70023409 MS.gene49039:CDS
GAAACTCACAAGACATGATC+TGG 0.369962 1.3:-70025252 MS.gene49039:CDS
GAGACGTACGGTTAGTGAAT+TGG 0.374358 1.3:-70023731 MS.gene49039:CDS
ATTCTTGTTGATCCAAAGTT+CGG 0.375321 1.3:-70023331 MS.gene49039:CDS
CTCAACCACTGCACCGCGTT+TGG 0.380726 1.3:+70027011 None:intergenic
TCCGTGACAAAAGGCATAAA+AGG 0.380847 1.3:+70014753 None:intergenic
TTCTTTCTTCTTGTTAAACT+TGG 0.382169 1.3:+70027172 None:intergenic
TGCATGGTATGTCACTTTAG+AGG 0.385125 1.3:-70016158 MS.gene49039:CDS
CGGATAGAACCGGTCAAGAT+TGG 0.387055 1.3:+70027454 None:intergenic
CAAAACAATATGTGGCTGAT+TGG 0.388450 1.3:-70022199 MS.gene49039:CDS
TTATCTGGAGTCAAATTTGC+AGG 0.390228 1.3:+70015032 None:intergenic
CCTCAAAATCATTGGGATCA+TGG 0.394187 1.3:+70023187 None:intergenic
TTCTTGTTGATCCAAAGTTC+GGG 0.397342 1.3:-70023330 MS.gene49039:CDS
GAGAGGAGTATGAATGTTCC+AGG 0.397987 1.3:-70013500 MS.gene49039:CDS
AGACGTACGGTTAGTGAATT+GGG 0.398274 1.3:-70023730 MS.gene49039:CDS
CTGTTCCCTTTGACTGTACT+GGG 0.401639 1.3:-70015980 MS.gene49039:CDS
CCACATTCCTCGATACCATT+TGG 0.404000 1.3:+70015302 None:intergenic
ACTTCTTTCCATGATACCTT+TGG 0.404894 1.3:+70016053 None:intergenic
TCAACAGGTTTGTCGTATCC+TGG 0.406591 1.3:+70023553 None:intergenic
TACAATACTTTGTGGGTGCC+CGG 0.407086 1.3:-70026385 MS.gene49039:CDS
TTCATGTAGGGTCTTTATAG+AGG 0.408155 1.3:-70022380 MS.gene49039:intron
TTTAAAACTCCAAATTCAAC+AGG 0.409165 1.3:+70023538 None:intergenic
GAAACAAATGTCTAGGCAAT+TGG 0.413011 1.3:-70026944 MS.gene49039:CDS
AACCATGTATCCAGAACGTC+AGG 0.414020 1.3:+70016013 None:intergenic
TTCGCTCTTCTTAGAAGCAT+TGG 0.414607 1.3:+70027044 None:intergenic
GCGTTTGTTGCTTGAGGAAA+CGG 0.416697 1.3:-70013411 MS.gene49039:CDS
GTTGCTCGTATGGTTATGTT+AGG 0.417546 1.3:-70015875 MS.gene49039:CDS
GGTTATGTTAGGAATGAAGT+TGG 0.418816 1.3:-70015864 MS.gene49039:CDS
CTCAAGTCGTCTGTGTCATC+AGG 0.421978 1.3:+70015953 None:intergenic
GTGTTGCAATCTCCAGTTGA+TGG 0.423671 1.3:+70014130 None:intergenic
GATTATTAACAGCCATCAAC+TGG 0.423925 1.3:-70014142 MS.gene49039:CDS
TCCATAGTTTATTGCACCAT+TGG 0.424169 1.3:+70015102 None:intergenic
CGTATCCTGGAACCTTTAGT+AGG 0.424339 1.3:+70023566 None:intergenic
ACGGCACCTGTCCCGAACTT+TGG 0.426283 1.3:+70023319 None:intergenic
GTATCCACTGGCAGCTAAAT+GGG 0.428587 1.3:+70015006 None:intergenic
CAACCACCCTTTGAATATCT+AGG 0.430230 1.3:+70015132 None:intergenic
ACAAGCTAGACCGTATCTAT+AGG 0.433169 1.3:-70024628 MS.gene49039:intron
ATGACCCGTTGAACCGGATC+CGG 0.433384 1.3:+70027477 None:intergenic
TTTCCAACCTCAAAATCATT+GGG 0.434718 1.3:+70023180 None:intergenic
GATCCCATTGAGGTGATAAA+CGG 0.435011 1.3:-70015419 MS.gene49039:CDS
TGAAAACGTTAATAAATTCA+AGG 0.435956 1.3:+70023148 None:intergenic
TTCTCGAGATCTTCGGGAAG+GGG 0.437694 1.3:+70027254 None:intergenic
ACCCTGACGTTCTGGATACA+TGG 0.439141 1.3:-70016015 MS.gene49039:CDS
ATCCCGTTTATCACCTCAAT+GGG 0.439700 1.3:+70015416 None:intergenic
CACAATTCTTCCGTGACAAA+AGG 0.441108 1.3:+70014744 None:intergenic
CAATCTTGACCGGTTCTATC+CGG 0.441340 1.3:-70027453 MS.gene49039:CDS
CCAGTTTCCAAAACAGAAGT+TGG 0.442158 1.3:+70015920 None:intergenic
GATTGGATGACCCGTTGAAC+CGG 0.442503 1.3:+70027471 None:intergenic
CACGATTTCTCCACGGCGGT+TGG 0.442654 1.3:+70026907 None:intergenic
CGTCTTTCAGAAGGAAAGTT+GGG 0.443739 1.3:+70014831 None:intergenic
AATGGATGACAAGAGATCTA+AGG 0.444070 1.3:-70024678 MS.gene49039:CDS
CATCCCGGATCCGGTTCAAC+GGG 0.444334 1.3:-70027481 MS.gene49039:CDS
AGGACCCTACTAAAGGTTCC+AGG 0.446579 1.3:-70023571 MS.gene49039:CDS
TGGAGTGTGCGAAGTAGTGA+AGG 0.448433 1.3:+70027329 None:intergenic
ACGTCGATTAGGAGCATCTC+TGG 0.449050 1.3:-70025059 MS.gene49039:CDS
GAATCTTTCTGCCATTAAAT+GGG 0.449504 1.3:+70023371 None:intergenic
CCTTTGGTTAGCCTCATCTC+TGG 0.454640 1.3:+70016069 None:intergenic
GTTATGTTAGGAATGAAGTT+GGG 0.455590 1.3:-70015863 MS.gene49039:CDS
ATTGATCCCGAGACTCCGTT+TGG 0.457470 1.3:-70026973 MS.gene49039:CDS
CTCGTACAATTCTAGAGACT+TGG 0.457664 1.3:+70014950 None:intergenic
GGTCTACATACAAGGTTAGA+AGG 0.458394 1.3:-70015383 MS.gene49039:CDS
TTATCACCAAACGGAGTCTC+GGG 0.461253 1.3:+70026967 None:intergenic
TAGATATTCAAAGGGTGGTT+GGG 0.464574 1.3:-70015130 MS.gene49039:CDS
TGGGTACCTGAGTTATAAAC+CGG 0.466375 1.3:+70027434 None:intergenic
CTCAAAATCATTGGGATCAT+GGG 0.466731 1.3:+70023188 None:intergenic
TTCTATCCGGTTTATAACTC+AGG 0.468719 1.3:-70027440 MS.gene49039:intron
TCTCTTTAACCACATGTGTT+CGG 0.471314 1.3:+70014163 None:intergenic
CAGAAACACCATCCCGGATC+CGG 0.472849 1.3:-70027490 MS.gene49039:CDS
CGTTTGTTGCTTGAGGAAAC+GGG 0.473518 1.3:-70013410 MS.gene49039:CDS
TAACAAGAAGAAAGAAGCTC+AGG 0.475307 1.3:-70027165 MS.gene49039:intron
AATTCTGAAGATGCTAGGCT+TGG 0.478510 1.3:-70013861 MS.gene49039:CDS
GTGACAGGTGCACTCCATAT+AGG 0.479206 1.3:-70026544 MS.gene49039:CDS
ATCCCATTGAGGTGATAAAC+GGG 0.482225 1.3:-70015418 MS.gene49039:CDS
GAGGCTAACCAAAGGTATCA+TGG 0.484629 1.3:-70016061 MS.gene49039:CDS
CCGTCTTTCAGAAGGAAAGT+TGG 0.484677 1.3:+70014830 None:intergenic
CTCGGGATCAATATAATCCT+CGG 0.485517 1.3:+70026984 None:intergenic
ACGATTTGCCATGAGCAAGC+TGG 0.486673 1.3:-70015072 MS.gene49039:CDS
TGGAGTGCACCTGTCACATT+TGG 0.488660 1.3:+70026550 None:intergenic
CTTCTCGAGATCTTCGGGAA+GGG 0.488660 1.3:+70027253 None:intergenic
TATCCCGTTTATCACCTCAA+TGG 0.488966 1.3:+70015415 None:intergenic
AGTTATAAACCGGATAGAAC+CGG 0.488978 1.3:+70027444 None:intergenic
ATAAACGGGATAACACTAGA+AGG 0.490277 1.3:-70015404 MS.gene49039:CDS
GGTTTGCTCAAGACACTTTG+TGG 0.490582 1.3:-70014809 MS.gene49039:CDS
TGCTCTGACAGCTGCGATTG+AGG 0.494180 1.3:-70026518 MS.gene49039:intron
CTTATCACCAAACGGAGTCT+CGG 0.494621 1.3:+70026966 None:intergenic
ACATGCCTCGATTTAAGGCT+CGG 0.497314 1.3:-70023080 MS.gene49039:CDS
CAGCTAGTTCTTTAGGGTCA+AGG 0.499517 1.3:+70015354 None:intergenic
TGACCCGTTGAACCGGATCC+GGG 0.500130 1.3:+70027478 None:intergenic
GAAGCTCTAAATACACAGAA+AGG 0.500453 1.3:+70013892 None:intergenic
CACTAGAAGGTCTACATACA+AGG 0.501510 1.3:-70015391 MS.gene49039:CDS
CGATTTGCCATGAGCAAGCT+GGG 0.503602 1.3:-70015071 MS.gene49039:CDS
GAGATCTTCGGGAAGGGGCG+AGG 0.507144 1.3:+70027259 None:intergenic
ACAATACTTTGTGGGTGCCC+GGG 0.510241 1.3:-70026384 MS.gene49039:CDS
CACCTAGGTTCCCTTCCAAA+GGG 0.510524 1.3:+70023503 None:intergenic
TGTAAAAGCAGGTTTGGGAA+TGG 0.510887 1.3:-70025117 MS.gene49039:intron
AAGATACTCACAATCACAAA+AGG 0.511388 1.3:+70026747 None:intergenic
CCATGTGCATCACGAATCAT+GGG 0.513007 1.3:+70015476 None:intergenic
CAAGGTGTATTACAGATGGC+TGG 0.513148 1.3:-70016236 MS.gene49039:intron
CACACTCCACTCTTCACCAA+TGG 0.513784 1.3:-70027315 MS.gene49039:CDS
GGCCATCCCAGTACAGTCAA+AGG 0.513909 1.3:+70015974 None:intergenic
TACTTTGTGGGTGCCCGGGA+TGG 0.514341 1.3:-70026380 MS.gene49039:CDS
AATAACAGAAGCATTACAAA+AGG 0.514652 1.3:-70023052 MS.gene49039:CDS
AAAGAAGCGTTTGTTGCTTG+AGG 0.515163 1.3:-70013417 MS.gene49039:CDS
AAAGAAGTTTCATTTAATCC+GGG 0.515836 1.3:-70016038 MS.gene49039:CDS
GTTGATCCAAAGTTCGGGAC+AGG 0.516831 1.3:-70023325 MS.gene49039:CDS
CTCATTGTTGCAGAGACGTA+CGG 0.517701 1.3:-70023743 MS.gene49039:intron
GAAAATAACGAGATGCGCCT+TGG 0.518115 1.3:-70022353 MS.gene49039:CDS
TCCCTTTGACTGTACTGGGA+TGG 0.518559 1.3:-70015976 MS.gene49039:CDS
GTGATAAGAAACAAATGTCT+AGG 0.518708 1.3:-70026951 MS.gene49039:CDS
CTAGATATTCAAAGGGTGGT+TGG 0.519304 1.3:-70015131 MS.gene49039:CDS
AATAACATTCCCCAAAGACT+TGG 0.519876 1.3:+70015442 None:intergenic
TTTAGAGGATGATGTGCTGC+AGG 0.520095 1.3:-70016143 MS.gene49039:CDS
GGGTGCGTACAATGACCATT+GGG 0.520197 1.3:-70016116 MS.gene49039:CDS
TCACCTAGGTTCCCTTCCAA+AGG 0.520353 1.3:+70023502 None:intergenic
GATGATGTGCTGCAGGAATT+GGG 0.520806 1.3:-70016136 MS.gene49039:CDS
TTGCCTCCACCAAATGTGAC+AGG 0.522537 1.3:-70026559 MS.gene49039:CDS
GGCAACGCCTTCCTTCGCCC+AGG 0.522639 1.3:-70014722 MS.gene49039:CDS
CCACTGCTGTGTATTCTTGG+TGG 0.523958 1.3:-70014914 MS.gene49039:CDS
TGTTCGACTTACAGTAAAAG+AGG 0.524760 1.3:+70014095 None:intergenic
GATTAGGAGCATCTCTGGAT+TGG 0.525106 1.3:-70025054 MS.gene49039:CDS
TGGGTGCGTACAATGACCAT+TGG 0.525893 1.3:-70016117 MS.gene49039:CDS
TCTGCTCTCTTACATTCCCT+GGG 0.526407 1.3:+70014705 None:intergenic
ATTTGTTTCTTATCACCAAA+CGG 0.527517 1.3:+70026958 None:intergenic
GAACTAGCTGTTGCCATAGA+GGG 0.528109 1.3:-70015341 MS.gene49039:CDS
TCTTCATGCTGTCACGGATG+AGG 0.529386 1.3:-70022246 MS.gene49039:CDS
TATCCAGAACGTCAGGGTCC+CGG 0.531929 1.3:+70016020 None:intergenic
AAATTTGCATACCCTTTGGA+AGG 0.532012 1.3:-70023514 MS.gene49039:CDS
AAAAGAAAGGACCCTACTAA+AGG 0.533218 1.3:-70023578 MS.gene49039:CDS
GGATCACTGCCAGAAAAGTA+AGG 0.533229 1.3:+70014852 None:intergenic
CCAACTTTCCTTCTGAAAGA+CGG 0.533799 1.3:-70014830 MS.gene49039:CDS
CAATTAATTCTGAAGATGCT+AGG 0.534014 1.3:-70013866 MS.gene49039:CDS
TCTTCTCGAGATCTTCGGGA+AGG 0.534076 1.3:+70027252 None:intergenic
CAGAAGAAGGACTTTCCAAA+TGG 0.535680 1.3:-70015317 MS.gene49039:CDS
GCATTTCACGACAGCTATGG+TGG 0.536878 1.3:-70016195 MS.gene49039:CDS
TGCTCTCTGCCGAACACATG+TGG 0.537802 1.3:-70014172 MS.gene49039:CDS
CTCTTACATTCCCTGGGCGA+AGG 0.538751 1.3:+70014711 None:intergenic
TAATATAGAGAATACCTTCA+CGG 0.538945 1.3:+70023300 None:intergenic
AAAAGAAAGGGAAAGAGAGA+AGG 0.540109 1.3:-70027207 MS.gene49039:CDS
CCATCCCGGATCCGGTTCAA+CGG 0.541946 1.3:-70027482 MS.gene49039:CDS
GGTGCCCGGGATGGATCATG+CGG 0.542104 1.3:-70026371 MS.gene49039:CDS
GGCTGGAAAACATTCGTGAT+TGG 0.542932 1.3:-70016219 MS.gene49039:CDS
TGATGACACAGACGACTTGA+GGG 0.543174 1.3:-70015951 MS.gene49039:CDS
TCGGGATCAATATAATCCTC+GGG 0.543850 1.3:+70026985 None:intergenic
AGAACTAGCTGTTGCCATAG+AGG 0.544850 1.3:-70015342 MS.gene49039:CDS
ACGGGTCATCCAATCTTGAC+CGG 0.545311 1.3:-70027463 MS.gene49039:CDS
TGAGCAAACCGTCTTTCAGA+AGG 0.546144 1.3:+70014822 None:intergenic
TACATTCCCTGGGCGAAGGA+AGG 0.546193 1.3:+70014715 None:intergenic
GGTGCATTTCACGACAGCTA+TGG 0.548304 1.3:-70016198 MS.gene49039:CDS
TGCAGGATACAATGATTCGT+TGG 0.548488 1.3:-70026423 MS.gene49039:intron
CATGCCTCGATTTAAGGCTC+GGG 0.551078 1.3:-70023079 MS.gene49039:CDS
CTGATGACACAGACGACTTG+AGG 0.551100 1.3:-70015952 MS.gene49039:CDS
GAGATCTAAGGCTGTAACAG+AGG 0.551509 1.3:-70024666 MS.gene49039:CDS
TGCCATAGAGGGTCAGAAGA+AGG 0.552277 1.3:-70015330 MS.gene49039:CDS
TGTATGAGACCAGCGCAAAA+CGG 0.552687 1.3:+70015267 None:intergenic
GGAGGCTCTTCATGCTGTCA+CGG 0.553142 1.3:-70022252 MS.gene49039:CDS
GATTATTCCAAAACAATATG+TGG 0.553287 1.3:-70022207 MS.gene49039:CDS
CATTTCACGACAGCTATGGT+GGG 0.554344 1.3:-70016194 MS.gene49039:CDS
GCCATCCCAGTACAGTCAAA+GGG 0.554762 1.3:+70015975 None:intergenic
ATCTGCCAAACGCGGTGCAG+TGG 0.555210 1.3:-70027016 MS.gene49039:CDS
AAATTAACCTAGATATTCAA+AGG 0.556368 1.3:-70015139 MS.gene49039:CDS
ATCCACCTCACCTATAGATA+CGG 0.556874 1.3:+70024618 None:intergenic
AATTCCCGCATGATCCATCC+CGG 0.557415 1.3:+70026366 None:intergenic
AAATTGTTGTTGCCACAACT+AGG 0.557967 1.3:-70023480 MS.gene49039:CDS
TACGGCAGTATCTGATATTG+AGG 0.558111 1.3:-70023694 MS.gene49039:intron
ATCATCTCCCAGCTTGCTCA+TGG 0.558192 1.3:+70015064 None:intergenic
ACAAATTCAATCGAAGAATG+AGG 0.559500 1.3:-70013456 MS.gene49039:CDS
TGTTAAGTCTATCAGATCAC+TGG 0.560182 1.3:-70014359 MS.gene49039:CDS
CATAGTTTCAATCCTAGTTG+TGG 0.560304 1.3:+70023468 None:intergenic
GCAACGCCTTCCTTCGCCCA+GGG 0.564843 1.3:-70014721 MS.gene49039:CDS
AATTTAGGTGGTACGAGTGG+TGG 0.566209 1.3:-70026815 MS.gene49039:intron
GAAACATTCTCTTTATAACC+TGG 0.571185 1.3:+70013482 None:intergenic
TTATTATGTGCAGGTAGTTG+TGG 0.572451 1.3:-70025297 MS.gene49039:intron
AAACTAACTTCTGTAGCGGA+TGG 0.572972 1.3:+70014660 None:intergenic
GCTGGTCTCATACACAGCTC+AGG 0.573991 1.3:-70015258 MS.gene49039:intron
ACTAGGATTGAAACTATGCT+TGG 0.574325 1.3:-70023463 MS.gene49039:CDS
AAATCATTGGGATCATGGGC+CGG 0.574958 1.3:+70023192 None:intergenic
GTACAATGACCATTGGGTAG+TGG 0.575801 1.3:-70016110 MS.gene49039:CDS
TGTCTGGATACAATACTTTG+TGG 0.576439 1.3:-70026393 MS.gene49039:CDS
GTATCCTGGAACCTTTAGTA+GGG 0.577632 1.3:+70023567 None:intergenic
AGGAATCCATTGGTGAAGAG+TGG 0.580092 1.3:+70027309 None:intergenic
GGGTGGTTGGGTATCGCCAA+TGG 0.581037 1.3:-70015118 MS.gene49039:CDS
AGTGCACCTGTCACATTTGG+TGG 0.582874 1.3:+70026553 None:intergenic
AATTTGCATACCCTTTGGAA+GGG 0.584345 1.3:-70023513 MS.gene49039:CDS
GTTCGGGACAGGTGCCGTGA+AGG 0.584369 1.3:-70023314 MS.gene49039:intron
CCGTTGAACCGGATCCGGGA+TGG 0.586221 1.3:+70027482 None:intergenic
TCGGAGGAGGAGGAATCCAT+TGG 0.588504 1.3:+70027299 None:intergenic
GGAGTGTGCGAAGTAGTGAA+GGG 0.589267 1.3:+70027330 None:intergenic
CAATCGCAGCTGTCAGAGCA+TGG 0.589443 1.3:+70026521 None:intergenic
ATGTTAGGAATGAAGTTGGG+AGG 0.591498 1.3:-70015860 MS.gene49039:CDS
CTGCCGCAGAAACACCATCC+CGG 0.592090 1.3:-70027496 MS.gene49039:intron
ATCTCCCATTTAGCTGCCAG+TGG 0.594947 1.3:-70015010 MS.gene49039:CDS
TGAGACCAGCGCAAAACGGA+GGG 0.595041 1.3:+70015271 None:intergenic
CCCATGATTCGTGATGCACA+TGG 0.595536 1.3:-70015476 MS.gene49039:CDS
AACAGAAGCATTACAAAAGG+AGG 0.596449 1.3:-70023049 MS.gene49039:intron
AATTAACCTAGATATTCAAA+GGG 0.596791 1.3:-70015138 MS.gene49039:CDS
ACGTTTATCTTCAGGATGAA+CGG 0.597355 1.3:+70023426 None:intergenic
GTGCCCGGGATGGATCATGC+GGG 0.597477 1.3:-70026370 MS.gene49039:CDS
ATTTAGGTGGTACGAGTGGT+GGG 0.599692 1.3:-70026814 MS.gene49039:intron
ATTATATTGAGATAAAAGAA+AGG 0.601884 1.3:-70023591 MS.gene49039:CDS
TAACCTAGATATTCAAAGGG+TGG 0.602041 1.3:-70015135 MS.gene49039:CDS
GTTCGGCAGAGAGCAAAAGC+TGG 0.603268 1.3:+70014180 None:intergenic
TTGCAGTGATATTGCAAAGG+AGG 0.604725 1.3:-70022270 MS.gene49039:CDS
ATTCCCGCATGATCCATCCC+GGG 0.607521 1.3:+70026367 None:intergenic
TCTAAAGTGACATACCATGC+AGG 0.608725 1.3:+70016160 None:intergenic
TTGGGATTGTGTGTTACGTA+CGG 0.610374 1.3:-70023712 MS.gene49039:CDS
TGAAGAAGAGGCCAGAGATG+AGG 0.610534 1.3:-70016080 MS.gene49039:CDS
ATCTCTGGATTGGTCTCGTG+AGG 0.611026 1.3:-70025044 MS.gene49039:intron
CTGGAGTCAAATTTGCAGGA+GGG 0.612291 1.3:+70015036 None:intergenic
GTCTGGATACAATACTTTGT+GGG 0.612817 1.3:-70026392 MS.gene49039:CDS
GCACCTGTCACATTTGGTGG+AGG 0.614161 1.3:+70026556 None:intergenic
TGAAAGCGTGGAGAATGAGA+TGG 0.618447 1.3:-70014398 MS.gene49039:CDS
TAAAAGGATGAAGCAATCGC+AGG 0.618602 1.3:+70014769 None:intergenic
TCTGGAGTCAAATTTGCAGG+AGG 0.620009 1.3:+70015035 None:intergenic
TGGCAAAAGAGAGACGTGAC+AGG 0.624683 1.3:-70014339 MS.gene49039:intron
TTACTGCTTGCAGATTACAC+CGG 0.626097 1.3:-70023211 MS.gene49039:intron
GGCAAATAGAAAGATTAGAG+AGG 0.626763 1.3:-70013517 MS.gene49039:CDS
AATATGTGGCTGATTGGAAG+AGG 0.627242 1.3:-70022193 MS.gene49039:intron
GAAGTAGTGAAGGGAAGTAA+CGG 0.629251 1.3:+70027339 None:intergenic
GGGGTCACCAAATTCCTGCA+TGG 0.630104 1.3:-70016174 MS.gene49039:CDS
AAACTCACAAGACATGATCT+GGG 0.632724 1.3:-70025251 MS.gene49039:CDS
CCAAATGGTATCGAGGAATG+TGG 0.633977 1.3:-70015302 MS.gene49039:CDS
GATGGGAAAGTAAATTCCAA+TGG 0.634773 1.3:-70023120 MS.gene49039:CDS
TCACGGATGAGGAAAACAGA+AGG 0.635525 1.3:-70022235 MS.gene49039:CDS
GAATGTTATTGATCCCATTG+AGG 0.636549 1.3:-70015429 MS.gene49039:CDS
TACCCTTTGGAAGGGAACCT+AGG 0.637827 1.3:-70023505 MS.gene49039:CDS
GGGAAAGTAAATTCCAATGG+TGG 0.638613 1.3:-70023117 MS.gene49039:CDS
AGCCAATGATAAAGCCACAA+TGG 0.640130 1.3:-70022301 MS.gene49039:CDS
CACGGATGAGGAAAACAGAA+GGG 0.640182 1.3:-70022234 MS.gene49039:CDS
TCATGCGGGAATTGCTACAC+AGG 0.641822 1.3:-70026356 MS.gene49039:intron
TGGCAACAACAATTTCACCT+AGG 0.642103 1.3:+70023488 None:intergenic
TCAACACAGATAGTATCCAC+TGG 0.644976 1.3:+70014994 None:intergenic
GGACTTTCCAAATGGTATCG+AGG 0.646270 1.3:-70015309 MS.gene49039:CDS
ATGAGACCAGCGCAAAACGG+AGG 0.649022 1.3:+70015270 None:intergenic
GCTTCCCGAGCCTTAAATCG+AGG 0.649064 1.3:+70023075 None:intergenic
GAAAAGAAATCTGCCAAACG+CGG 0.654105 1.3:-70027024 MS.gene49039:CDS
CAATTGCAGTGATATTGCAA+AGG 0.655646 1.3:-70022273 MS.gene49039:CDS
AAACAAACTAACTTCTGTAG+CGG 0.656165 1.3:+70014656 None:intergenic
ACTTAACAGTAGACTCAATG+AGG 0.657410 1.3:+70014374 None:intergenic
TACAATTTAGGTGGTACGAG+TGG 0.660228 1.3:-70026818 MS.gene49039:intron
GAAGTATAATCCAACCGCCG+TGG 0.661509 1.3:-70026917 MS.gene49039:CDS
GAGCTGGAATAATGAAAGCG+TGG 0.662401 1.3:-70014410 MS.gene49039:CDS
GCAAGATGTCCAAGTCTTTG+GGG 0.663281 1.3:-70015451 MS.gene49039:CDS
ATTTCACGACAGCTATGGTG+GGG 0.663855 1.3:-70016193 MS.gene49039:CDS
CTGCAATTGACATACCATTG+TGG 0.665557 1.3:+70022287 None:intergenic
ATACTCACAATCACAAAAGG+CGG 0.675300 1.3:+70026750 None:intergenic
GTGCAATAAACTATGGAATG+CGG 0.676125 1.3:-70015096 MS.gene49039:CDS
CCACCAAGAATACACAGCAG+TGG 0.692418 1.3:+70014914 None:intergenic
CCAGAGATGAGGCTAACCAA+AGG 0.697459 1.3:-70016069 MS.gene49039:CDS
TGCAGTGGTTGAGAATCCCG+AGG 0.697853 1.3:-70027001 MS.gene49039:CDS
CTACATACAAGGTTAGAAGG+TGG 0.713369 1.3:-70015380 MS.gene49039:CDS
TGCTTCTTGAACATACACCA+AGG 0.717307 1.3:+70022336 None:intergenic
CACTCACGATTTCTCCACGG+CGG 0.720194 1.3:+70026903 None:intergenic
CATGTGCATCACGAATCATG+GGG 0.721117 1.3:+70015477 None:intergenic
ACCATGTATCCAGAACGTCA+GGG 0.747479 1.3:+70016014 None:intergenic
TGACACTCACGATTTCTCCA+CGG 0.759309 1.3:+70026900 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.3 gene 70013394 70027759 70013394 ID=MS.gene49039
chr1.3 mRNA 70013394 70027759 70013394 ID=MS.gene49039.t1;Parent=MS.gene49039
chr1.3 exon 70027745 70027759 70027745 ID=MS.gene49039.t1.exon1;Parent=MS.gene49039.t1
chr1.3 CDS 70027745 70027759 70027745 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70027441 70027509 70027441 ID=MS.gene49039.t1.exon2;Parent=MS.gene49039.t1
chr1.3 CDS 70027441 70027509 70027441 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70027166 70027363 70027166 ID=MS.gene49039.t1.exon3;Parent=MS.gene49039.t1
chr1.3 CDS 70027166 70027363 70027166 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70026910 70027085 70026910 ID=MS.gene49039.t1.exon4;Parent=MS.gene49039.t1
chr1.3 CDS 70026910 70027085 70026910 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70026758 70026830 70026758 ID=MS.gene49039.t1.exon5;Parent=MS.gene49039.t1
chr1.3 CDS 70026758 70026830 70026758 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70026519 70026584 70026519 ID=MS.gene49039.t1.exon6;Parent=MS.gene49039.t1
chr1.3 CDS 70026519 70026584 70026519 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70026357 70026440 70026357 ID=MS.gene49039.t1.exon7;Parent=MS.gene49039.t1
chr1.3 CDS 70026357 70026440 70026357 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70025229 70025306 70025229 ID=MS.gene49039.t1.exon8;Parent=MS.gene49039.t1
chr1.3 CDS 70025229 70025306 70025229 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70025045 70025128 70025045 ID=MS.gene49039.t1.exon9;Parent=MS.gene49039.t1
chr1.3 CDS 70025045 70025128 70025045 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70024629 70024708 70024629 ID=MS.gene49039.t1.exon10;Parent=MS.gene49039.t1
chr1.3 CDS 70024629 70024708 70024629 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70023695 70023752 70023695 ID=MS.gene49039.t1.exon11;Parent=MS.gene49039.t1
chr1.3 CDS 70023695 70023752 70023695 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70023315 70023617 70023315 ID=MS.gene49039.t1.exon12;Parent=MS.gene49039.t1
chr1.3 CDS 70023315 70023617 70023315 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70023050 70023220 70023050 ID=MS.gene49039.t1.exon13;Parent=MS.gene49039.t1
chr1.3 CDS 70023050 70023220 70023050 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70022194 70022393 70022194 ID=MS.gene49039.t1.exon14;Parent=MS.gene49039.t1
chr1.3 CDS 70022194 70022393 70022194 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70015841 70016243 70015841 ID=MS.gene49039.t1.exon15;Parent=MS.gene49039.t1
chr1.3 CDS 70015841 70016243 70015841 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70015259 70015510 70015259 ID=MS.gene49039.t1.exon16;Parent=MS.gene49039.t1
chr1.3 CDS 70015259 70015510 70015259 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70014668 70015168 70014668 ID=MS.gene49039.t1.exon17;Parent=MS.gene49039.t1
chr1.3 CDS 70014668 70015168 70014668 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70014340 70014431 70014340 ID=MS.gene49039.t1.exon18;Parent=MS.gene49039.t1
chr1.3 CDS 70014340 70014431 70014340 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70014107 70014206 70014107 ID=MS.gene49039.t1.exon19;Parent=MS.gene49039.t1
chr1.3 CDS 70014107 70014206 70014107 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70013831 70013973 70013831 ID=MS.gene49039.t1.exon20;Parent=MS.gene49039.t1
chr1.3 CDS 70013831 70013973 70013831 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
chr1.3 exon 70013394 70013538 70013394 ID=MS.gene49039.t1.exon21;Parent=MS.gene49039.t1
chr1.3 CDS 70013394 70013538 70013394 ID=cds.MS.gene49039.t1;Parent=MS.gene49039.t1
Gene Sequence

>MS.gene49039

ATGAGTGTCTACACGGTAATCGATGCTCTAAGTGTGACTTTGTGTTTTAAATTACGGTAAATCCAAAAAAAGATGTTTTTTAAAAAAAAAAAAATGAAAATCTATTATCCCAAACCCTAATAAAAACACTAATTTTTGCCGGCGGCGGAGTAGTTATTTTTGTTGTTCTTTATTTACGTTTGTTCTGCTTCAGAAGAAGATAAAATTTCCGGTGCTCAGTCATATTCTCTCATTTCCTCCTCTGCCGCAGAAACACCATCCCGGATCCGGTTCAACGGGTCATCCAATCTTGACCGGTTCTATCCGGTTTATAACTCAGGTACCCAAACATTACATTAGGTTTTGTTGTTCCGTTTCTGAACTCTGGTTTACTCACTCTATCTTCCATCTTGATAGCGCCGTTACTTCCCTTCACTACTTCGCACACTCCACTCTTCACCAATGGATTCCTCCTCCTCCGATAACAAAAACGTGCAATCCTCGCCCCTTCCCGAAGATCTCGAGAAGAAGAAGAAAAAACTGGAAAAGGAAAAAGAAAGGGAAAGAGAGAAGGCTGAGAAATTAGCCAAGTTTAACAAGAAGAAAGAAGCTCAGGTCACTAATCTTCCCATTTATTCATTCATTCATTTCATCTTCTAAATATTCATTTTTAATTTTTGTTGTTTTTGTTTTAGCAACTAGCGCAACAAGCATCCAATGCTTCTAAGAAGAGCGAAAAGAAATCTGCCAAACGCGGTGCAGTGGTTGAGAATCCCGAGGATTATATTGATCCCGAGACTCCGTTTGGTGATAAGAAACAAATGTCTAGGCAATTGGCGCAGAAGTATAATCCAACCGCCGTGGAGAAATCGTGAGTGTCAGCTAATTCACTAGTTTGTTACATTTCAATTGTATGAAATGCTTATCTTTTAATGTTTGATACAATTTAGGTGGTACGAGTGGTGGGAGAAATCAAAGTATTTTGTGGCAGATGCTAGCAGCAAGAAACCGCCTTTTGTGATTGTGAGTATCTTTTCCAGCTTATTCTGATGTTGTGTCAACATAATGTTGTTTCAATTTTCATACGTGGGAGTAAAAAAAAAAAAAACAGTTCAATTTTTGTGTATGTAAGAAAAACAATTTTGTCTGAATTGAGATTTATATGTATCTATAATCTGACTGTGCTATAATTTTAGGTTTTGCCTCCACCAAATGTGACAGGTGCACTCCATATAGGCCATGCTCTGACAGCTGCGATTGAGGTATCTTTGATTTCCCATTTTCACATTTCTGTTTTGCTGTTTAAAACAGTTAATGCCAATGTGATATATTGCTTGCAGGATACAATGATTCGTTGGCGACGAATGTCTGGATACAATACTTTGTGGGTGCCCGGGATGGATCATGCGGGAATTGCTACACAGGTTTTATTTCCAACTTGAGAAGATGATGCTGTTCTTATCTCTCTTGTAATTATTTATCATTTATTGTGGATTTTGTTGTCGGGTGGTGGGTGAAGGACCACTTGTTTGGCTCATGCTTGAATTCTAGGCTCATTGGGATAAGGATGCTAAATCATATCGTTGTTGTTATTATTATTATTATTAGGGACAGAGGATTGTTCGACACTTCAAGGGCCCAGGCCCTTGCTGACATTTTTAGAATCTGTTAGTAGAGTATATATGAAGTGAGTAACTGCCATTATTTGTTAGCATGTCAGCTATTTATCCTCTTTTGTTGAAACCTTTACATGCAGTTAATTTATTTGAAACTAATAATAATTGCGAGGGTAAAGATGTACTATAATAGAGTAGAGAAAACACTTTTGTGTGCTAGTTAGTTTTGAAGATTATGCATAATATAACTAAAATAAATAGGAAGATAAAGTTAGTATTATCTGTCTGTCTCATATTAATCTGTCTGTCTCATATTAATCGTGGTTAGGTCACCTTAGGTCCATTCTTTCTTTTGGTGAGTAATTGTTTTTTTGGGATGTATACAATTGAGGATGAGAATTTGACCATGCAACAATTTTTGACTCTGGAGCAATGAAAACTAAGTCTGATTGATATCATGGGTTGGTAAAAACTAGAAAAGCATAATGTTATTATCTTTTCTTGTCTATAGAGCATTAACTTTTATTCTCACTCTTTTTGTTTCTTCTGCTACAAAGTGATCTTTTATAAACAAAAATATAGTAAAGATTACACTTCACAACAAGATGGAAGATGAATATTTGATTGTCTGTCTGCTAGTATACATTGAAGAGAAAATTGCTAAATTTTTTAGTGTAGATTCAACTATAGATGATTTTTGTTACATGCTGGAGATGCAATCTGCATTTTGATGGATTTCTAATGTAATCAATGTTTTGTATTGAACTTGATTCATAAATATTTATTGGACGAGCTCCAATTTTTAAATTTGGCTCATGCTATGATATAAGTCTAGCCCCCCCTGATTATTATGTGCAGGTAGTTGTGGAGAAAAAGATAATGCGTGAGAAGAAACTCACAAGACATGATCTGGGTCGTGAAAAATTTATCTCAGAGGCATGTTTTGTTAATAATCTTTACAGTCAAAGTTCTTAATAATTTGATGTTTGATATTTTCTCTGTTTGTTCCAACTCTTGTGAATATTTGTAAAAGCAGGTTTGGGAATGGAAAAACAAGTATGGGGGCACAATTTTGCAACAATTACGTCGATTAGGAGCATCTCTGGATTGGTCTCGTGAGGTAAATATGTAACCTAGTTAGTGTTTATACCACTGGTATCTCTCTCACTCTTTTTTTTTTTTTTTTTTTTTTTTGGATTTGTGGGGGGTTGAGAATCTGGTAAGATGGAAACAAAATGAACTCAAAAGAAGCAAATAACAATCAATTGTGCTGCATGTTTATCCTAGTTACACCCTTATAAATCACTCGAGTAGAAATCGACATGAAGTTAAGATAACTGAAACAAAGCCTGTCCTATGGCAGTTAAATGGCTATTTCTCATGCAATTTCACTGCCGTAGTATGGTGATTGACTTTAATATGTATCTGCATTCTAAGTCTCAATCTCTCTTTTCAGTGCTTCACAATGGATGACAAGAGATCTAAGGCTGTAACAGAGGCTTTTGTAAGGCTTTACAAGCTAGACCGTATCTATAGGTGAGGTGGATAATGGCAGTATGTATTGTCAATATGTACTGTCTTTATGTAATGCTTTTATTCCTATTTTTCTGAGGTGCATAATAGTCATTGATGCCGATTCCAATTTTAAATTTATAGTTATGCTCATACATGATTTTATAGATATTCTTGATTGTATCCGAACAAAGTTTAAATCGATGCATTATTGGAAACAATATCGTGTACCTAATAAATAAGTATAAGTATTGACTAATAATATTTACTTAAAGGCCAAAGCAAATATAATCGTGTCTGTAAGAGTGACTGTCTCAGATCTTTTTACTATATATGATTCCCCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGATACTTTATGTACAAGGAAAAAAACTTTTACCTGAACTTCCTGCCAAGCATGAATCTGAAGTCAAAACAAGAGTCACATGGACTAAGGCCATATTTTGGAAACATGATATAGTTTAAGCTTCAGTGTAGATTAAAATATATTTAGTATAGTTGCAAACCTATTGAACATAAAATAGTAAATCCCATCATCTGTTTATTTAGATCAAGTCAAATTAAAATGTCATGCTGACGTGATATTGTTGATTGAGCTGAGTGCTCTGTCAAGATTCTTAACTTTTTTTATGACTCAAAATGGCTCTTTTGCCGATATTCTACCCTTTCCTTTCATTGTTTCGATTCTGTTGTATTTAGTTTTGGCTGTTCCATCAACTTCTCAGTTCCTTATATCACAACTTATACTTAACATTTTTATTTTATGTGCCTGTCACATGAACTCTAAAATGGCTCTTCTTTGGATATATTGCTCTTGTTTCTCATTGTTGCAGAGACGTACGGTTAGTGAATTGGGATTGTGTGTTACGTACGGCAGTATCTGATATTGAGGTATGTGATGGATGTACTGCTGTTTCATCTGATGGATTGCATATGTAAATTATTATGTAACTGTTTATTGCTTGTAGGTGGATTATATTGAGATAAAAGAAAGGACCCTACTAAAGGTTCCAGGATACGACAAACCTGTTGAATTTGGAGTTTTAAAAAAATTTGCATACCCTTTGGAAGGGAACCTAGGTGAAATTGTTGTTGCCACAACTAGGATTGAAACTATGCTTGGTGATACTGCTATTGCCGTTCATCCTGAAGATAAACGTTACGAACAATTTCATGGAAAATATGCTGTTCACCCATTTAATGGCAGAAAGATTCCTATAATATGTGATGCTATTCTTGTTGATCCAAAGTTCGGGACAGGTGCCGTGAAGGTATTCTCTATATTATTTAAGATTAAAAGTTCCATCTAAGTTCTCTTTCAAGCGATGTTTGTACATGTTATGATGTTTTCCTTACTGCTTGCAGATTACACCGGCCCATGATCCCAATGATTTTGAGGTTGGAAAACGTCACAACCTTGAATTTATTAACGTTTTCACTGACGATGGGAAAGTAAATTCCAATGGTGGCTCAGCATTTTTGGACATGCCTCGATTTAAGGCTCGGGAAGCAATAACAGAAGCATTACAAAAGGAGGTATTGACTATTGTTACAGAAATCTCTTCCATATGACACTTCCGGTGCTTAGGCAACAAATATGTTACGTGGAAAACTTTTATTGGAAAGTATGGATGTAAGGGGGGATTGTGATTTTAATTAATTTTTAAAATGCTGCTTTCAATATTCTTTTGGCCTTCTTCAAAACAAAAAATTTCTTCTTTTGACCCCTATTTATCAATTCGTATGTTTATGCTAGAGGTACTAGCAATGCTGACAAAAATGTAACCGTGAACTAGGATTGGGAGGACTGAGGAGGGTGAATGATCGTAATAAGATGATAGCACCATGGATTGTAAGATCGTACTGAATCTGCAAATTATACTTATACATCCATAAAAAATAACTTAGCTAAAGATAATAACCTCTAAAGACAATTATAATACGAAGGAACAGAAAGAATGTGAATGGGCTTATTCAAATTGTTAGTAAACAAAAACATGGAAAATACAAAAAGGACTTGAACTGCCTCAACAGCAGGTGCACGAGGCAGCAAGTAAAAACAAGTGAGGGGTGTTCTAGCCGTTGTATTAGTATTTATCTCTATCTTAACTTAACTTGGAAGTTTTCTGTGTAATGACACGCACAATAATTGGGCATTCATTTCATTGTTTCATTTGCTTCCTTTCATGTAGGGTCTTTATAGAGGATCTGAAAATAACGAGATGCGCCTTGGTGTATGTTCAAGAAGCAACGATGTTATAGAGCCAATGATAAAGCCACAATGGTATGTCAATTGCAGTGATATTGCAAAGGAGGCTCTTCATGCTGTCACGGATGAGGAAAACAGAAGGGTAGAGATTATTCCAAAACAATATGTGGCTGATTGGAAGAGGTGCTTATATATTTCTTTTATAAATTCTTATAACAAACAGTGACGCAGTACGGAAGCGTAGGGTTAGCAAACGCTAAACCTAGATAGAAAAGAACAAGTTTGCAAGCGACAAACTTGTGAAAATAGGGTTGCAAGCGACAAACCTATCAAAATAAGGGTTCCGGAATCCACCAGAATTGAGAGAAAATCTCTAATAATTTTATTGAATCAAAAGTGTGCCTCTTAGGCTGCATAAGTTCTGCTTATATAGGGAAAGAAATAACAAACCCGTGGGCCAAAATAAAACAAAACGAAATAATAATAGAAAGTTCTAGAAAATTACTAAGATTTGGTTAAAATAAAATACTACGAAATTACTAAGAAAGCCCTCCTACATCAGTCTCCTCCACCTCTGAAGAACTCGACCCCGAGTTCTCATCTTGATAAAGGACTTCATCTGCATGGTATTCATGAATGTCTGCCACATTGAAAGTGTTGGAAATGTTCATAGAATCTGGAAGTGCTACCACATATGCATTATCATTGATCTTGCGAGTCACTTTGAACGGACCATACTTGCGGGGCTGTAGCTTGCTGTAGGTACCAACGGGAAATCTCTCTTTTCGCAGAAACACCATCACATCATCCCCCACATTGAAAACCTTGACTCTTCGCCGTTTATCTGCAGCAGCTTTATTTTTCAACCCGGTAGCTTCTAACTTGGCCTTGACAGAATCTTTCACAGTCATAATCCCTTCAGCCATCTTTTCAGCAGCTACGCTAACTCCAGGAGCTTTAGGCAACTTAATCAAATCAACCACATGTCTAGGGACAGAAGTGTAAACAAGTGCAAAAGGTGTTTTTCCGGTAGCAGAATGCACGGTGCTGTTATAAGCAAATTCAACCTGAGGTAAAGCCAAGTCCCACTGTTTCGGTTTGTCACCACAAACACAGCGAATCATATTTCCCAAAGTCCTGTTCGTGACCTCAGTTTGTCCATCAGTCTGGGGGTGAGCGGTAGAACTCCTGTTCAGTGATGTTCCAAATAATTTCCACAGAGTAATCCAAAAATGACTGAGGAATTTGGTGTCTCTGTCGGAGGTAATAGATGTAGGAACCCCATGAAGGCGCACAACCTCTCTGAAAAACAATTTGGCTATGTTGGATGCATCCGCAGTCTTCTTGCATGCAATGAAATGGGACATCTTGGAGAATCGGTCCACAACCACAAACACAGAATCCACACCTCGCTGGGTACGAGGCAAACCCAACACGAAATCCATAGATAAATCCTGCCAAATGTCATCAGGAATGGGTAAAGGCATGTAAAGACCAGTGTTTGGCGACAGACCTTTAGAAACTTGGCAAGTGTAGCATTTCCTGACAATGGTTCCAACATCTTTTCTCAAGTGCGGCCAATAAAACCTTTCTTCTAGACTAGCAATGGTCTTATCTCGCCCCATGTGTCCACTAAGACCGCCACTATGTAGGTCCCTAATTAATTTCTCCCTCAAGGATGAGCAAGGAATGCACAGTTGGTCTCCTTTAAAAAGGTATCCTTCTCGAATATGAAAATCTGCACAAGGATGCTCCTTGCAATTGGCCCATAATTCTTTGAACTCAACATCACTCTCATATAATTCTTTTAGGCATTCAAAACCCACAACCTCTTGTGCTAAAGTGACAAGCAAAGAAGCTCTCCTACTTAAAGCATCAGCTACCTTGTTGAGAGCACCAGATTTATGCTGAATAATAAATGGGAATTTTTGCAGAAAACTCACCCACCGAGCGTGCATCTTGTTGATTACTTTCTGACTATGGAGAAATTTCAGAGCTTGATGATCAGTAAACAGAATGAACTCTCTATGAATCAAATAATGCTCCCATTGGCGAAGGGCTCTGAAAACGGCGTAAAATTCTTGGTCATAAGTACTCCATTTTTGGCGAGCTTCACTCAACTTCTCACTAAAGAAAGCAATTGGCTTCTTCTCTTGAGACAAAACAGCTCCTATTCCAATTCCACTAGCATCACATTCAACTTGGAACACCTTTTCAAAATCAGGAAGAGCTAAGACTGGGGCGGTGCACAACTTCTTTTTTATTAAGGCAAAACTCTGATCTTGCTCGGAACCCCACTTGAATTTTCCTTTCTTCAAACATTCTGTGATTGGTGCAGTGATAGTGCTGAAATCTTTGATAAATCTTCTATAAAAAGTGGCCAGTCCGTGAAAACTACGTACTTCAGTAACTGATGTGGGTGCAGGCCAATCTCTGATAGCCCTCACCTTTTCCTCATCAACCTGGATTCCTTCTTCACCAACTATAAACCCCAAGAAAAGTAACTTGTTGGTACTGAATGTGCACTTTTTCAGATTAATGTACAACTGATTATCTTGTAAAACTTGCAAAACCAGCCTCACATGTTCCAAGTGCTCTTTCTTGGACTTACTATAAATCAAAATATCATCAAAATAAACTACCACAAAGGATCCAATAAAGGGGCGTAGAACCTGATTCATTAATCGCATGAAGGTGCTAGGGGCGTTTGACAATCCGAAAGGCATCACTAGCCATTCATAAAGTCCATCCTTACTCTTGAAAGCTGTCTTCCACTCATCTCCTGGTCTAATTCTGATTTGATGATATCCACTACGCAGATCTATTTTTGAAAACACCTTAGACCCTGACAACTCATCAAGCATGTCTTCTAAACGGGGAATTGGAAACCGATACTTGATAGTTATCTTGTTGATGGCTCTACTGTCGACACACATCCTCCACTGATTTCCTTTCTTTGGTACTAAAAGGACTGGGACAGCACAAGGACTCATGCTCTCACGGATGAATCCCTTTCTTAGTAAATCCTCAATCTGCTCCCTTAAAATCTCGTTCTCTTTAGGACTCATGCGGTAATGAGGAAGGTTTGGTAGGCTAGATCCTGGAATCAAGTCTATCTGATGTTGAATATCTCTCATAGGAGGTAAATCATTTGGAAGCTCATCTGCAATCAGCTCATTGAAATCTTTTAGAATTTCTAAGACTTCACTTGGTATCGGAATCTCTTCTTTCACCACATTCATCAGCCCTTTGATCACAACCGGACAAAAACACTCAGTTTCCTTAACAGCATCATCAAGTTCCTTTTCATTCTGAGTCATCACTAGGAAACTCGTTTTCTTCTCTTTCGGGTTCTTATCAAATTGTAAAACAGGTGTCATAGCAATCTTATGGGCTCCCCAAGTAAACAACATCACATTATCCCGTCCCCGATAAGTAATATCATTATCAAACTGCCAAGGTCTACCAAGTAAAATATGACAAACATCCATATCAAGAACATCACAAAGTACCTCTTCTCTATAATGTTTGCCGATGGATATAGGAACTTTGCAGGACAGCGTCACTCGTACCTGGGATCCCTTGCTGACCCAGCCAAGAGAGTATGGCTTCTCATGAGGCTCCGTGGGTAGCTTGAAATAATCCACCAATTTTTTTTGACACCAAGTTCTCCGTGCTTCCATTATCAATTATCAGGTCACATACTTTGTTATTGACGGAACAACGAGTCTTAAATAAATTTTTGCGTTGGCCTTCCTCTTTGGATGCCAGCAACGTTCGCTGAAGCACAAAGTTCACTCTCTCTTCAGAATCTTCCTCAGCAAACTCAACTCCTACATATTCATCTTCCTCGTCAAGTTGCTCATCACCATCATCCAAACCTTCTGCTACTCCAGCAACCCTCCTTGATGGACAAACATTGGACTTGTGACCCTTCCCACCGCAGCGGTAACAATTATCACCACTAGGATACGCATAAGGGTTGTTCTGCTTTTGAACGGGGGCCTTGACTGGAGGTGCACTGCCAGAACTGCTTGCTTTGCTAACATGGTTTGAATCTTTGACTGCTGCACTTTTCTCTTTGTCATCAGCTTGGTTCTGTGGAGAATATCTTCTGAAATTTGAGAAATTTCTAGGGGATTTCTCTATTAATTCCGCCTTTAAAGCTAGGTTGGACGCTTCAGCAACGGTCCAAACAGTCTGTAATCCCATTTTTTCTTGCAATGAACTTTTCAAACCGCTAATATACCGAGCCACCTTCTGATTCTCGGACTCGCCTAATTCATTACGTTCAGAAAAACGCAAAAATTCAGCCGTGTACTCAGTCACTGATCGCTTGCCCTGAACACATTCAATATACATCTTATATAGAATCTGTTCATAATCTTCAGGTAAAAATCTGTCAAGCATCAACTGTTTCATCTTTCTCCAAGTTCGAATAGGGGGTTTATTTTGTCTACGCCTCTGAACAACGAGCTTATCCCACCAAACAGCTGCGGTGCTTTTCAGCCTGATCGCAACCATCTTAACCTGCTTGTCTGTCGGGATGCCCATGACTTCGAAAAATCTATCAACATCGATCTGCCAGTCCAAGAATTCTTCTACTCCCATCGTTCCGTGAAATAGGGGAATATCAGCCTTAACGCGGTAATCTTGGTGATTCCCACGTTCACTCCCATCATCGATCACGACTTCATCCTCATCAAAACTCAAATCATCATCAGAAGGGTTGTTGACATAACGAACCCTAATATCCGGAGTTGGTCCTCCTCCCCTGTTGTTGCGGTTGTTGTTGTTATTTCGGTTGTTGTTGTTGTTTCGGTTGTTGTTTTTTTTGGCGAGGTCGTCCACCCTAGCCGTCAACGTCGTTATTTGAGCCGTCGTTGCCGTTGTTGTTGTGGATATCGCTGCAATCTGATCTGCAAGAGCTTTGATGGTTGCAGCTAAACCGTCAAAATCTGCCCTGGTAACTGGTTGATCTCCCATGGCTGATCACGTTAGAAAAAAGAACAGGAGAAACCTGCTCTGATGCCAACTGACGCAGTACGGAAGCGTAGGGTTAGCAAACGCTAAACCTAGATAGAAAAGAACAAGTTTGCAAGCGACAAACTTGTGAAAATAGGGTTGCAAGCGACAAACCTATCAAAATAAGGGTTCCGGAATCCACCAGAATTGAGAGAAAATCTCTAATAATTTTATTGAATCAAAAGTGTGCCTCTTAGGCTGCATAAGTTCTGCTTATATAGGGAAAGAAATAACAAACCCGTGGGCCAAAATAAAACAAAACGAAATAATAATAGAAAGTTCTAGAAAATTACTAAGATTTGGTTAAAATAAAATACTACGAAATTACTAAGAAAGCCCTCCTACATCAAACAGCTACTGTACTTATTTTTGAGAGCACTCCTCTGAAATGTGGTCTATGATTTAAACCATAATGCTTGAGCCCACCCCTTATATATGTTTTAACATCTCTAGATTCCGTTCAATTATAGTATCATCTTTTTAATTTTTAGTGAGAAATGTTGAGTTTGAGTTTGACCGGTAGAGATGAAGACTGAAACTGATCAGGCTGAAGAAGTATTGATATAGTCAATTCAATTAATTGTCACTGCTTCCTTTTGTGAGAAGATATAGAAAATATCTCAAAACATATTATTATATTGCAGATATTTTAGACTATCTTAGTTAATATCTTAGGAGCGGTGTACATTTAATTACTTTTAGTGATTTGTATTTTGGAGTCTATTTATTAGCAAAATAGAGGTTAGTGAATTGTATTTTGTAATATTGTTAATTATACGAAAATATATCAATATTACATTTTATAACTGTATATATGTTCTCTCTTTTCCTTCTTCCTATTCTATTAGTGTCGACATCACTGGATTTTTACACTCAACCAAATATATTCGTCAAACACAGAAGGAAAATCGTTGGATGCTGTTATTGGAGTAGAGTCGACCTTTTTTTTTTTTTTTTTTGGTTAATGGATTGGAGTCAATTTCATATATATTACTACACATATGCCACAATTTTGTGGTGGCCAACTTGGCATGCTCCCATTTCTGTTATCTTCTTACTCGCCTTTATTTGTATGATACAACCATGTTTTAATCAAGGTGTATTACAGATGGCTGGAAAACATTCGTGATTGGTGCATTTCACGACAGCTATGGTGGGGTCACCAAATTCCTGCATGGTATGTCACTTTAGAGGATGATGTGCTGCAGGAATTGGGTGCGTACAATGACCATTGGGTAGTGGCAAAAAATGAAGAAGAGGCCAGAGATGAGGCTAACCAAAGGTATCATGGAAAGAAGTTTCATTTAATCCGGGACCCTGACGTTCTGGATACATGGTTTTCTTCTGGTCTGTTCCCTTTGACTGTACTGGGATGGCCTGATGACACAGACGACTTGAGGGCATTTTATCCAACTTCTGTTTTGGAAACTGGCCATGATATCCTCTTTTTCTGGGTTGCTCGTATGGTTATGTTAGGAATGAAGTTGGGAGGTGATGTGCCTTTTAGCAAGGTGAGGTTGCTATCTTTTGCTGATCATTTGGGGAGAGCTCTATCTTTGTAAATGCCTAATGAATTTTGTGTGATACTCAGGTGGTATGCTCACATAGTAAACATTAACCGTGATTTTTAGTCATTGATGCCTAAGTTTTTCTTTTCTGTATTATAAATTAGCAAATTCATTAAATCAGAAAAGAAGATTCAGAAAGTAGGTGGACTAGAGAGATTCTCTTTCATGAAAACATAAAAAGAAAACAGAGTACATCAATGAAGACCAATCTTGTTGATGCCTAACTTTTTATATCAATGGTCTTCTGACAGAAGTACTTACAATTATATGCAGATTTATTTGCACCCCATGATTCGTGATGCACATGGACGCAAGATGTCCAAGTCTTTGGGGAATGTTATTGATCCCATTGAGGTGATAAACGGGATAACACTAGAAGGTCTACATACAAGGTTAGAAGGTGGTAACCTTGACCCTAAAGAACTAGCTGTTGCCATAGAGGGTCAGAAGAAGGACTTTCCAAATGGTATCGAGGAATGTGGTGCTGATGCCCTCCGTTTTGCGCTGGTCTCATACACAGCTCAGGTCCATCTGTTACCAACTGCTTGCATGATTATTTTTGCACCTATTTAGTTAACTTTTGTTATGTAACTTTGCTCGTTTCTTCCATTTCAGTCTGACAAAATTAACCTAGATATTCAAAGGGTGGTTGGGTATCGCCAATGGTGCAATAAACTATGGAATGCGGTACGATTTGCCATGAGCAAGCTGGGAGATGATTATATCCCTCCTGCAAATTTGACTCCAGATAATCTCCCATTTAGCTGCCAGTGGATACTATCTGTGTTGAATAAAACCATATCGAAAGTAACCAAGTCTCTAGAATTGTACGAGTTCTCGCAAGCTACCACTGCTGTGTATTCTTGGTGGCAGTATCAATTGTGTGATGTGTTTATTGAAGTGATCAAGCCTTACTTTTCTGGCAGTGATCCCAACTTTCCTTCTGAAAGACGGTTTGCTCAAGACACTTTGTGGTTTTGTCTGGACAATGGCCTGCGATTGCTTCATCCTTTTATGCCTTTTGTCACGGAAGAATTGTGGCAACGCCTTCCTTCGCCCAGGGAATGTAAGAGAGCAGAATCTATCATGATAGCTGATTATCCATCCGCTACAGAAGTTAGTTTGTTTTAATATTTAGCTCTTTATAACATGAATTACATTGCTGTATATTTCGAGTTCATCCTTTTTGTATACATTCACGTTAATTTACTCTTCATTGATAGTCCTAATTGAGAAACGTTCGCTAATAGAAAATGTGTGTTTGGCGTGCATCAATTGACTATTAAAGAATAGAACATGATTTGTTTGGCTATATCTTTAATTGTTCTATTTAATTATTTCTTTAATATCAGAGCTGGAATAATGAAAGCGTGGAGAATGAGATGGACCTCATTGAGTCTACTGTTAAGTCTATCAGATCACTGGCAAAAGAGAGACGTGACAGGTATGTGGGAGGCAATGACCTTAGAGCATAGTACTTTGTATTTATTAATGTCAAAAATTTGTTTTTCTAGTAATTAGATTATTATTCAATCTAATATGCTTTGCTGATGTGAACAATAATTACTGTTTGCCAGGCGACCAGCTTTTGCTCTCTGCCGAACACATGTGGTTAAAGAGATTATTAACAGCCATCAACTGGAGATTGCAACACTAGCTAATCTATCCTCTTTTACTGTAAGTCGAACACATGACTGTTGTGTTCTCGTCTGCAATCCTTGTATTTTGTTGTGATTTTGTCATTAATCATGTATCAATTTCACTTGATTTACAATTTTTTTACCTTCAATGCCAATGATACAATTCACAGGTGATCACTGAAATTGAAGCTGATCTTTCTGGATACGCTGATACTGTCGTAAATGAAAGCCTTTCTGTGTATTTAGAGCTTCAAACAATTAATTCTGAAGATGCTAGGCTTGGAAAGATGAAGAAGATAGATGAGCTGAAAAAGTATGTTAACCTCGCATTGTTTTTCAGAACACATTTTAACATAGCTAGTAATAAATACAACAAGGTTGCAAATAATGCGATTTGCATTTTGACACAAATCAACATAATAGTTGAGCATGCTTGCATGGTACCTTTTAGGCGGAGTTTCGAATTTGTTGCAAAACATTTTGAATTACACTTTATTTTATTTTACTAAAATAATTGATACTCTTGTCTAGCCTATAATCATATTTTTCTTTCTGTGTGGGTTTCGATACAACTTGAACTTATAGACTGGAGAATTTTTATGCAGGCAAATAGAAAGATTAGAGAGGAGTATGAATGTTCCAGGTTATAAAGAGAATGTTTCGCAACAAATTCAATCGAAGAATGAGGAGAAGCTAGAATCCCTAAAGAAGCGTTTGTTGCTTGAGGAAACGGGTGTACTGAGTATCTAG
Protein sequence

>MS.gene49039.t1

MSVYTKHHPGSGSTGHPILTGSIRFITQRRYFPSLLRTLHSSPMDSSSSDNKNVQSSPLPEDLEKKKKKLEKEKEREREKAEKLAKFNKKKEAQQLAQQASNASKKSEKKSAKRGAVVENPEDYIDPETPFGDKKQMSRQLAQKYNPTAVEKSWYEWWEKSKYFVADASSKKPPFVIVLPPPNVTGALHIGHALTAAIEDTMIRWRRMSGYNTLWVPGMDHAGIATQVVVEKKIMREKKLTRHDLGREKFISEVWEWKNKYGGTILQQLRRLGASLDWSRECFTMDDKRSKAVTEAFVRLYKLDRIYRDVRLVNWDCVLRTAVSDIEVDYIEIKERTLLKVPGYDKPVEFGVLKKFAYPLEGNLGEIVVATTRIETMLGDTAIAVHPEDKRYEQFHGKYAVHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFINVFTDDGKVNSNGGSAFLDMPRFKAREAITEALQKEGLYRGSENNEMRLGVCSRSNDVIEPMIKPQWYVNCSDIAKEALHAVTDEENRRVEIIPKQYVADWKRWLENIRDWCISRQLWWGHQIPAWYVTLEDDVLQELGAYNDHWVVAKNEEEARDEANQRYHGKKFHLIRDPDVLDTWFSSGLFPLTVLGWPDDTDDLRAFYPTSVLETGHDILFFWVARMVMLGMKLGGDVPFSKIYLHPMIRDAHGRKMSKSLGNVIDPIEVINGITLEGLHTRLEGGNLDPKELAVAIEGQKKDFPNGIEECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSKLGDDYIPPANLTPDNLPFSCQWILSVLNKTISKVTKSLELYEFSQATTAVYSWWQYQLCDVFIEVIKPYFSGSDPNFPSERRFAQDTLWFCLDNGLRLLHPFMPFVTEELWQRLPSPRECKRAESIMIADYPSATESWNNESVENEMDLIESTVKSIRSLAKERRDRRPAFALCRTHVVKEIINSHQLEIATLANLSSFTVITEIEADLSGYADTVVNESLSVYLELQTINSEDARLGKMKKIDELKKQIERLERSMNVPGYKENVSQQIQSKNEEKLESLKKRLLLEETGVLSI