AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47287


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47287.t1 MTR_6g027620 97.050 983 20 3 1 977 1 980 0.0 1964
MS.gene47287.t1 MTR_1g101620 37.917 989 502 24 66 974 95 1051 0.0 640
MS.gene47287.t1 MTR_2g436760 26.400 500 314 10 320 789 421 896 7.44e-46 179
MS.gene47287.t1 MTR_2g436760 31.250 240 149 5 76 302 108 344 1.30e-21 102
MS.gene47287.t1 MTR_4g076850 23.103 580 391 15 324 863 340 904 2.37e-31 133
MS.gene47287.t1 MTR_4g076850 28.679 265 158 8 70 314 7 260 2.90e-15 81.3
MS.gene47287.t1 MTR_4g132500 27.984 243 143 7 34 262 37 261 1.26e-11 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47287.t1 AT5G16715 81.102 926 170 3 53 977 53 974 0.0 1593
MS.gene47287.t1 AT1G14610 38.750 960 488 20 66 944 133 1073 0.0 659
MS.gene47287.t1 AT5G49030 25.400 500 319 11 320 789 619 1094 4.18e-39 158
MS.gene47287.t1 AT5G49030 30.415 217 137 4 84 289 316 529 1.52e-19 95.5
MS.gene47287.t1 AT5G49030 25.400 500 319 11 320 789 433 908 4.85e-39 158
MS.gene47287.t1 AT5G49030 30.415 217 137 4 84 289 130 343 1.30e-19 95.5
MS.gene47287.t1 AT5G49030 25.400 500 319 11 320 789 433 908 7.40e-39 157
MS.gene47287.t1 AT5G49030 30.415 217 137 4 84 289 130 343 1.16e-19 95.5
MS.gene47287.t1 AT4G10320 25.000 548 343 15 324 826 337 861 1.67e-32 137
MS.gene47287.t1 AT4G10320 27.500 240 162 5 70 300 7 243 5.44e-15 80.5
MS.gene47287.t1 AT4G04350 28.205 273 158 8 1 254 1 254 3.57e-12 71.2

Find 224 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGATACCATCAAAGATTT+TGG 0.093108 6.4:-2708166 MS.gene47287:CDS
GGCATGACATATTGTTCTTT+TGG 0.226761 6.4:-2708528 MS.gene47287:CDS
TAATGTTCTAATTTCAAAAT+AGG 0.229920 6.4:-2703872 None:intergenic
TGGCAACTCTGCTGCTTTAA+TGG 0.230306 6.4:-2706598 MS.gene47287:CDS
GAGAAACATATGATTTCTTT+TGG 0.237299 6.4:-2706761 MS.gene47287:CDS
CAAACCTTCTCAAATCTTTC+GGG 0.246280 6.4:+2710569 None:intergenic
TAAACAGTGGTTTGTAAGTA+TGG 0.248008 6.4:-2710648 MS.gene47287:CDS
CCATTGGCTTTCCAACATTA+AGG 0.252877 6.4:-2710037 MS.gene47287:CDS
CGCAGCAAAGTCAAAAGTTT+TGG 0.253211 6.4:+2717618 None:intergenic
TGCAAATAAATATAAGAAAA+TGG 0.263171 6.4:+2708460 None:intergenic
AATTACATTTCCCAATGTTT+TGG 0.269426 6.4:+2708195 None:intergenic
ACAAACCTTCTCAAATCTTT+CGG 0.290590 6.4:+2710568 None:intergenic
TATACCTTGTCAGCAATAAT+AGG 0.291780 6.4:+2711723 None:intergenic
GCTCTTCAAGCAGTTGAAAA+AGG 0.300986 6.4:-2710608 MS.gene47287:CDS
TTGCGATTCACAGTAGCTTT+AGG 0.303426 6.4:-2708133 MS.gene47287:CDS
TTGTACTTCAGGTTCATATA+TGG 0.310436 6.4:-2713081 MS.gene47287:intron
CGGAAGAACGCATATATAAT+TGG 0.312991 6.4:-2717597 MS.gene47287:intron
GCTGGTACACCTTGGAAGTT+TGG 0.321321 6.4:+2705442 None:intergenic
GAACGTTATTCAAAGTATAT+TGG 0.321578 6.4:-2711786 MS.gene47287:CDS
ATATCTCCCTTTGGCCGATA+TGG 0.329210 6.4:-2704644 MS.gene47287:CDS
TTCTCCACCACGCTGAGATC+TGG 0.330492 6.4:+2710797 None:intergenic
ACACGTCCAGAGACTCTATT+TGG 0.333232 6.4:-2712514 MS.gene47287:CDS
AATACTTAATGTGATGAATA+AGG 0.338827 6.4:-2711036 MS.gene47287:CDS
ATGCCACCTCCCAATGTTAC+TGG 0.341451 6.4:-2716902 MS.gene47287:CDS
AGACCAACACTTTGGCTTCC+TGG 0.343218 6.4:-2716249 MS.gene47287:CDS
ACCGCTCAGTAGACAAATTA+AGG 0.347872 6.4:+2707990 None:intergenic
TTAGAGCTATCAGAAATATT+CGG 0.354860 6.4:-2705289 MS.gene47287:CDS
CAGTATGTTGATAGAGAGTT+TGG 0.358432 6.4:-2711131 MS.gene47287:CDS
AAATCATCTGCAGACAAATC+TGG 0.359743 6.4:+2709120 None:intergenic
ATGAATTCACAAGAAGAGTT+TGG 0.360315 6.4:-2715094 MS.gene47287:CDS
GGCCATCCAAGCGTACTAAA+AGG 0.361025 6.4:+2709141 None:intergenic
GACCAACACTTTGGCTTCCT+GGG 0.363256 6.4:-2716248 MS.gene47287:CDS
CTGGCCAAGGTGATACAATA+AGG 0.363915 6.4:+2705468 None:intergenic
GTTCGAAAATTTGCAAACTT+TGG 0.364817 6.4:-2705408 MS.gene47287:intron
GACAGGGTTAGGTGTGAAAA+AGG 0.365302 6.4:-2710841 MS.gene47287:CDS
CAGGTTCATATATGGTAAAT+TGG 0.368840 6.4:-2713073 MS.gene47287:CDS
GGAGAATATACTCTCGTATA+AGG 0.370321 6.4:-2707876 MS.gene47287:intron
GGAATCAAGAGGGTTGAAAT+AGG 0.376904 6.4:-2715122 MS.gene47287:CDS
CATATTAGATATCGCGTTGC+TGG 0.377495 6.4:-2712889 MS.gene47287:CDS
GACTTGGTGCTTCGTGTGAT+TGG 0.380400 6.4:-2714504 MS.gene47287:CDS
ATACCTGTTTGGTATATTGA+TGG 0.382514 6.4:-2709976 MS.gene47287:CDS
AGGGTTGAGTTTGTTACAAA+TGG 0.383753 6.4:+2719626 None:intergenic
TTTATTTGCATGGACTCATC+AGG 0.385518 6.4:-2708447 MS.gene47287:CDS
GCAATTGTGCCTCTGACATT+TGG 0.389280 6.4:-2711756 MS.gene47287:CDS
ATAAGGGCATGCGTCCGGTT+AGG 0.389898 6.4:+2705485 None:intergenic
ATCTGTCCCAAAATCTTTGA+TGG 0.394479 6.4:+2708159 None:intergenic
AACATACCAATCAGCAAAAT+CGG 0.410509 6.4:+2706737 None:intergenic
GAGCTTGAGGAGACAGGGTT+AGG 0.413872 6.4:-2710852 MS.gene47287:CDS
GTCAACAGGCACTCCCTAAC+CGG 0.415540 6.4:-2705499 MS.gene47287:intron
AAAGGATGTAGAAATATATC+AGG 0.420771 6.4:-2709878 MS.gene47287:CDS
TAGAGCTATCAGAAATATTC+GGG 0.421276 6.4:-2705288 MS.gene47287:CDS
TCACTTCCCCGGTCGAAGTT+CGG 0.422180 6.4:+2716941 None:intergenic
GTTGAGTATTCAGAAGAATC+TGG 0.422519 6.4:-2712922 MS.gene47287:CDS
CCAACTACAATGCTTGAAAC+CGG 0.423210 6.4:-2709084 MS.gene47287:CDS
CCGGTTTCAAGCATTGTAGT+TGG 0.429626 6.4:+2709084 None:intergenic
GTTGATAGAGAGTTTGGAAC+TGG 0.433900 6.4:-2711125 MS.gene47287:CDS
TTTGTTTGTGAAGGCCTTGT+TGG 0.437214 6.4:+2707961 None:intergenic
CACCTTGGAAGTTTGGTCTC+TGG 0.439033 6.4:+2705449 None:intergenic
ATCCTGATGTTCTTGACACT+TGG 0.443418 6.4:-2709855 MS.gene47287:CDS
CAATCAGTTCATCTTGTGGC+TGG 0.443896 6.4:-2704682 MS.gene47287:CDS
TAAGGGCATGCGTCCGGTTA+GGG 0.445936 6.4:+2705486 None:intergenic
AGCTTTAGGAACAGCTGGCC+AGG 0.449217 6.4:-2708119 MS.gene47287:intron
GGTGGCAAGAATGGTGATGA+TGG 0.449353 6.4:-2708506 MS.gene47287:CDS
TTTCCATCAATATACCAAAC+AGG 0.450231 6.4:+2709973 None:intergenic
AACCAAGTGTCAAGAACATC+AGG 0.450973 6.4:+2709853 None:intergenic
GAGAAAGGCTTGATTTATCA+AGG 0.451818 6.4:-2714154 MS.gene47287:intron
GGGGACACCGGATACCTGTT+TGG 0.452732 6.4:-2709987 MS.gene47287:CDS
TCTTCCTTTACCAGAGCGTT+GGG 0.459162 6.4:-2706936 MS.gene47287:CDS
GGCTTTCCAACATTAAGGAT+TGG 0.461260 6.4:-2710032 MS.gene47287:CDS
CAAAATCTTTGATGGTATCA+AGG 0.462335 6.4:+2708167 None:intergenic
GGCACATTAAATGAAGTTGC+TGG 0.464439 6.4:-2711011 MS.gene47287:CDS
TGGGCAGAGCTTGAGGAGAC+AGG 0.464455 6.4:-2710858 MS.gene47287:CDS
TTTAGCACTTCTCTCTCGGC+TGG 0.467264 6.4:-2704885 MS.gene47287:CDS
TCATCCAGGATATTATGGTT+AGG 0.467520 6.4:-2716290 MS.gene47287:intron
TGCAGAAATATCAACCATAT+CGG 0.467594 6.4:+2704630 None:intergenic
GGAAGTTTGGTCTCTGGCCA+AGG 0.468055 6.4:+2705455 None:intergenic
ATCTTCCTTTACCAGAGCGT+TGG 0.469236 6.4:-2706937 MS.gene47287:CDS
TTCCTTACCACCCAACGCTC+TGG 0.469406 6.4:+2706926 None:intergenic
GGAGAATGATGTATCTGCTT+GGG 0.470816 6.4:-2707897 MS.gene47287:CDS
AGTTTGTTACAAATGGAGAA+TGG 0.472015 6.4:+2719633 None:intergenic
ACATCACCAAATAGAGTCTC+TGG 0.476226 6.4:+2712508 None:intergenic
TTTGTTAGGCTTCATGAGAA+AGG 0.477831 6.4:-2714169 MS.gene47287:CDS
TCATACAGATTTACAACCAT+TGG 0.478717 6.4:-2710053 MS.gene47287:intron
TCTCCACCACGCTGAGATCT+GGG 0.479100 6.4:+2710798 None:intergenic
CAATATACCAAACAGGTATC+CGG 0.480223 6.4:+2709980 None:intergenic
ATGAAGTTGCTGGCTTGTAC+AGG 0.481214 6.4:-2711001 MS.gene47287:intron
ACCACCCAACGCTCTGGTAA+AGG 0.481782 6.4:+2706932 None:intergenic
ACTGCACGGACCACCTCTTC+CGG 0.483141 6.4:+2703964 None:intergenic
TTATTCATCACATTAAGTAT+TGG 0.485291 6.4:+2711038 None:intergenic
CTCTGCTGCTTTAATGGCAC+AGG 0.485306 6.4:-2706592 MS.gene47287:CDS
TGCAAAGATCCAGTAACATT+GGG 0.490290 6.4:+2716893 None:intergenic
AACTTCATTGCTTGCAACCA+CGG 0.491314 6.4:+2705226 None:intergenic
TACGACTTAGCTGTTCATCA+AGG 0.491515 6.4:+2714464 None:intergenic
CTCCTTCTACCAGTTGGTCG+TGG 0.493995 6.4:-2715165 MS.gene47287:intron
GCTGCTGCTTCAGAGAATAA+TGG 0.496187 6.4:-2717664 MS.gene47287:CDS
TATCTACTTGCTCGAAAGCT+TGG 0.498057 6.4:-2711065 MS.gene47287:CDS
ACTAGAGGCATATCTCCCTT+TGG 0.499196 6.4:-2704653 MS.gene47287:CDS
CCAATGCGTCTTCTCACAAC+AGG 0.499468 6.4:-2719534 MS.gene47287:intron
TTCAAAGTATATTGGTCAGA+TGG 0.501350 6.4:-2711778 MS.gene47287:CDS
CATAGCTCCTCAGTTACAAA+TGG 0.508398 6.4:+2706516 None:intergenic
ACAGTAGCTTTAGGAACAGC+TGG 0.508956 6.4:-2708124 MS.gene47287:CDS
GTTCATCTTGTGGCTGGGGA+AGG 0.510310 6.4:-2704676 MS.gene47287:CDS
GTGGCAAGAATGGTGATGAT+GGG 0.511591 6.4:-2708505 MS.gene47287:CDS
TCACAAGAAGAGTTTGGCAG+TGG 0.512578 6.4:-2715088 MS.gene47287:CDS
GTTCCACAATTTGTTTGTGA+AGG 0.513527 6.4:+2707952 None:intergenic
AATACACCAATCCTTAATGT+TGG 0.516206 6.4:+2710026 None:intergenic
TCAGTTACAAATGGCATGAA+AGG 0.517760 6.4:+2706525 None:intergenic
TCACAAAAGGATCACTTCCC+CGG 0.518374 6.4:+2716930 None:intergenic
TCTATTTGGTGATGTGGCAT+TGG 0.520746 6.4:-2712500 MS.gene47287:CDS
ATCGCGTTGCTGGAGGTTCA+AGG 0.521304 6.4:-2712879 MS.gene47287:intron
AGGAGAATGATGTATCTGCT+TGG 0.521679 6.4:-2707898 MS.gene47287:CDS
ATCAGTTCATCTTGTGGCTG+GGG 0.522123 6.4:-2704680 MS.gene47287:CDS
ACAGACTGCTGTTTCCGACT+TGG 0.522532 6.4:-2713039 MS.gene47287:intron
GTGCAAAGATCCAGTAACAT+TGG 0.523046 6.4:+2716892 None:intergenic
ATACAATAAGGGCATGCGTC+CGG 0.525972 6.4:+2705480 None:intergenic
AATCAGTTCATCTTGTGGCT+GGG 0.526234 6.4:-2704681 MS.gene47287:CDS
AGGAGAAGAGAGAGAACGGC+GGG 0.527423 6.4:+2719590 None:intergenic
CTGTTGTCGAGGCATTTGTT+AGG 0.527495 6.4:-2714183 MS.gene47287:CDS
GTTTGTGAAGGCCTTGTTGG+AGG 0.527951 6.4:+2707964 None:intergenic
CATTTCATGAATTCTTCCCC+AGG 0.530217 6.4:-2704848 MS.gene47287:intron
GGTGGCATTGATATCACAAA+AGG 0.532245 6.4:+2716917 None:intergenic
AAAATCTTTGATGGTATCAA+GGG 0.534549 6.4:+2708168 None:intergenic
TTTACTTTATTCAGGTATGG+TGG 0.534711 6.4:-2714550 MS.gene47287:intron
TGAAGGGAAGACCAACACTT+TGG 0.537925 6.4:-2716257 MS.gene47287:CDS
TGTATTGCAGAACTTGCCTA+AGG 0.540468 6.4:-2707918 MS.gene47287:CDS
TGAAGAGCTTTCTCAGCAAG+AGG 0.540724 6.4:+2710623 None:intergenic
CGTAGAGAAAGCTCCGGAAG+AGG 0.540972 6.4:-2703977 MS.gene47287:CDS
CATTTGTAACTGAGGAGCTA+TGG 0.542250 6.4:-2706515 MS.gene47287:CDS
AATTCCCGAAAGATTTGAGA+AGG 0.543685 6.4:-2710573 MS.gene47287:intron
TGGCCAAGGTGATACAATAA+GGG 0.544167 6.4:+2705469 None:intergenic
CGGTTACGATAGCGGCGAGA+AGG 0.547790 6.4:+2719570 None:intergenic
TATCAACCATATCGGCCAAA+GGG 0.548346 6.4:+2704638 None:intergenic
TGGACTCATCAGGGATTCAC+AGG 0.548619 6.4:-2708437 MS.gene47287:intron
GAAACAGCAGTCTGTAGAGT+TGG 0.554866 6.4:+2713047 None:intergenic
AACCACTGTTTACTAACAAG+TGG 0.556466 6.4:+2710659 None:intergenic
ATGATGGGGATTGAATTCAC+TGG 0.557106 6.4:-2708490 MS.gene47287:CDS
CCTTAATGTTGGAAAGCCAA+TGG 0.558404 6.4:+2710037 None:intergenic
GGTGTATTAGCAGACAACTA+TGG 0.560098 6.4:-2710011 MS.gene47287:CDS
GATGCTGATATTCGTTTCGC+AGG 0.560320 6.4:+2705248 None:intergenic
TATTCGTTTCGCAGGCTCAA+CGG 0.561022 6.4:+2705256 None:intergenic
AGAGACTCTATTTGGTGATG+TGG 0.561314 6.4:-2712506 MS.gene47287:CDS
GTTAGGTACAATCGCATGAA+GGG 0.561774 6.4:-2716273 MS.gene47287:CDS
AGAGAGAAGTGTAGTAGACA+TGG 0.561798 6.4:+2719674 None:intergenic
GACAACTATGGTGGGGACAC+CGG 0.563993 6.4:-2709999 MS.gene47287:CDS
CTTTACAACTCTGGCAATGG+TGG 0.564611 6.4:-2706618 MS.gene47287:CDS
CTTCCTGGGACTGATCATGC+TGG 0.564974 6.4:-2716234 MS.gene47287:CDS
AGGCCTTCACAAACAAATTG+TGG 0.565015 6.4:-2707955 MS.gene47287:CDS
CAACTACAATGCTTGAAACC+GGG 0.565085 6.4:-2709083 MS.gene47287:intron
AAGAGGACTATATAGTTGCT+AGG 0.566311 6.4:-2709942 MS.gene47287:CDS
CGGCGGGTGTAGAAGAGAAG+AGG 0.567940 6.4:+2719606 None:intergenic
AAAGGGCGGCTTTACAACTC+TGG 0.567950 6.4:-2706627 MS.gene47287:CDS
TGTTCCTATTATTGCTGACA+AGG 0.568642 6.4:-2711727 MS.gene47287:intron
GGTTAGGTACAATCGCATGA+AGG 0.568791 6.4:-2716274 MS.gene47287:CDS
TTTCATGCCATTTGTAACTG+AGG 0.570297 6.4:-2706523 MS.gene47287:CDS
CGGCTTTACAACTCTGGCAA+TGG 0.571313 6.4:-2706621 MS.gene47287:CDS
AGGTACATTGAGGCTAGCAA+AGG 0.575269 6.4:-2706645 MS.gene47287:CDS
GAAAGAATGCTAGTTTCTGA+AGG 0.576646 6.4:-2715143 MS.gene47287:CDS
ACGACTTAGCTGTTCATCAA+GGG 0.578403 6.4:+2714465 None:intergenic
ATTAGATATCGCGTTGCTGG+AGG 0.581701 6.4:-2712886 MS.gene47287:CDS
TGTTACTGGATCTTTGCACA+TGG 0.583798 6.4:-2716888 MS.gene47287:CDS
TGTGGCTGGGGAAGGACTAG+AGG 0.583940 6.4:-2704668 MS.gene47287:CDS
GAGAAGGAGAAGAGAGAGAA+CGG 0.584167 6.4:+2719586 None:intergenic
TGTAACTGAGGAGCTATGGC+AGG 0.584558 6.4:-2706511 MS.gene47287:intron
GCAGATACATCATTCTCCTT+AGG 0.585649 6.4:+2707902 None:intergenic
TAGTCATTATGATCATGTCC+TGG 0.586950 6.4:+2711086 None:intergenic
TTCTGCAGAAGCTGTTGTCG+AGG 0.597774 6.4:-2714194 MS.gene47287:intron
TCATGCTGGTATTGCAACAC+AGG 0.599275 6.4:-2716220 MS.gene47287:intron
ACAAACAAATTGTGGAACGC+TGG 0.602399 6.4:-2707947 MS.gene47287:CDS
TTACTGGATCTTTGCACATG+GGG 0.602873 6.4:-2716886 MS.gene47287:CDS
ATACCAGCATGATCAGTCCC+AGG 0.604472 6.4:+2716231 None:intergenic
TTTACAGAGCTGGTACACCT+TGG 0.604491 6.4:+2705434 None:intergenic
TTATTTGCATGGACTCATCA+GGG 0.604726 6.4:-2708446 MS.gene47287:CDS
ATGCCCTTATTGTATCACCT+TGG 0.604799 6.4:-2705472 MS.gene47287:CDS
AGCTCACAAGAAATATGGAA+AGG 0.605023 6.4:-2709896 MS.gene47287:CDS
GGTACATTGAGGCTAGCAAA+GGG 0.607149 6.4:-2706644 MS.gene47287:CDS
GTCCCAGGAAGCCAAAGTGT+TGG 0.607708 6.4:+2716246 None:intergenic
GGGCAGAGCTTGAGGAGACA+GGG 0.608287 6.4:-2710857 MS.gene47287:CDS
TTGCGAAGCGGTTACGATAG+CGG 0.613706 6.4:+2719562 None:intergenic
TGATGGAAAAGACAAAGAAG+AGG 0.616419 6.4:-2709959 MS.gene47287:CDS
TATTAGCAGACAACTATGGT+GGG 0.616540 6.4:-2710007 MS.gene47287:CDS
TCCTTTACCAGAGCGTTGGG+TGG 0.617355 6.4:-2706933 MS.gene47287:intron
GCAGTTCGTAGAGAAAGCTC+CGG 0.617766 6.4:-2703983 MS.gene47287:intron
GATGCTAGGTGGGAGTCACA+AGG 0.618627 6.4:-2716974 MS.gene47287:intron
ATATCAACCATATCGGCCAA+AGG 0.618736 6.4:+2704637 None:intergenic
AGAGAAAGCTCCGGAAGAGG+TGG 0.622477 6.4:-2703974 MS.gene47287:CDS
GGCCAGAGACCAAACTTCCA+AGG 0.622853 6.4:-2705451 MS.gene47287:CDS
AGCCACTTGTTAGTAAACAG+TGG 0.624512 6.4:-2710661 MS.gene47287:CDS
GTTACTGGATCTTTGCACAT+GGG 0.624536 6.4:-2716887 MS.gene47287:CDS
ACAAATCAGATCAAAAGACT+TGG 0.627789 6.4:-2714520 MS.gene47287:CDS
ACTCCTTCTGCATCTTCACA+AGG 0.629257 6.4:+2704584 None:intergenic
GATCCAGTAACATTGGGAGG+TGG 0.630336 6.4:+2716899 None:intergenic
TGGCAAGAATGGTGATGATG+GGG 0.632708 6.4:-2708504 MS.gene47287:CDS
CTTAATGTGATGAATAAGGA+CGG 0.635220 6.4:-2711032 MS.gene47287:CDS
TAGAGTTCAGAAATTCAAGA+CGG 0.636647 6.4:+2703893 None:intergenic
TGATCAATCAGTTCATCTTG+TGG 0.639212 6.4:-2704686 MS.gene47287:CDS
GGCATTGGCAGTTAATCCAA+AGG 0.640019 6.4:-2712485 MS.gene47287:intron
ACCTTAATTTGTCTACTGAG+CGG 0.642120 6.4:-2707991 MS.gene47287:CDS
TTTAAGCCGAACTTCGACCG+GGG 0.645763 6.4:-2716947 MS.gene47287:CDS
GTTCCCAGATCTCAGCGTGG+TGG 0.649736 6.4:-2710801 MS.gene47287:CDS
TGCAATGTTTGTGACCCTTG+AGG 0.650484 6.4:-2716861 MS.gene47287:intron
CTGGGAACTCGTAAAGTGTG+TGG 0.654246 6.4:+2710816 None:intergenic
TAGTTTCTGAAGGAATCAAG+AGG 0.656480 6.4:-2715133 MS.gene47287:CDS
GCGCCTTGTGAAGATGCAGA+AGG 0.657266 6.4:-2704587 MS.gene47287:CDS
GTATTAGCAGACAACTATGG+TGG 0.657443 6.4:-2710008 MS.gene47287:CDS
AAGGAGAAGAGAGAGAACGG+CGG 0.658797 6.4:+2719589 None:intergenic
ATGCTAGGTGGGAGTCACAA+GGG 0.660476 6.4:-2716973 MS.gene47287:intron
AGTTTCTGAAGGAATCAAGA+GGG 0.660848 6.4:-2715132 MS.gene47287:CDS
AAGATGCAGAAGGAGTATGA+TGG 0.663028 6.4:-2704577 MS.gene47287:CDS
ACATGGCGTCCAAATGTCAG+AGG 0.663457 6.4:+2711747 None:intergenic
TGTGAGAAGACGCATTGGTG+TGG 0.663530 6.4:+2719539 None:intergenic
GGCGGGTGTAGAAGAGAAGA+GGG 0.666539 6.4:+2719607 None:intergenic
TGTCAGCAATAATAGGAACA+TGG 0.668400 6.4:+2711730 None:intergenic
AAAGATCCAGTAACATTGGG+AGG 0.669034 6.4:+2716896 None:intergenic
GAAACGAATATCAGCATCCG+TGG 0.669059 6.4:-2705243 MS.gene47287:CDS
TGATGGGGATTGAATTCACT+GGG 0.669450 6.4:-2708489 MS.gene47287:CDS
AAATCTTTGATGGTATCAAG+GGG 0.670748 6.4:+2708169 None:intergenic
TGAGCGGTTGACCTCCAACA+AGG 0.671067 6.4:-2707975 MS.gene47287:CDS
TCTGCTCTTAAGGTACATTG+AGG 0.676679 6.4:-2706655 MS.gene47287:intron
GCATTGGTGTGGTTGCGAAG+CGG 0.687385 6.4:+2719550 None:intergenic
ATTAGCAGACAACTATGGTG+GGG 0.691066 6.4:-2710006 MS.gene47287:CDS
CCTGTTGTGAGAAGACGCAT+TGG 0.691450 6.4:+2719534 None:intergenic
ACATTGAGGCTAGCAAAGGG+CGG 0.697416 6.4:-2706641 MS.gene47287:CDS
CGAGTTCCCAGATCTCAGCG+TGG 0.739749 6.4:-2710804 MS.gene47287:CDS
AATCTTTGATGGTATCAAGG+GGG 0.773264 6.4:+2708170 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.4 gene 2703873 2719694 2703873 ID=MS.gene47287
chr6.4 mRNA 2703873 2719694 2703873 ID=MS.gene47287.t1;Parent=MS.gene47287
chr6.4 exon 2719535 2719694 2719535 ID=MS.gene47287.t1.exon1;Parent=MS.gene47287.t1
chr6.4 CDS 2719535 2719694 2719535 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2717598 2717688 2717598 ID=MS.gene47287.t1.exon2;Parent=MS.gene47287.t1
chr6.4 CDS 2717598 2717688 2717598 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2716862 2716988 2716862 ID=MS.gene47287.t1.exon3;Parent=MS.gene47287.t1
chr6.4 CDS 2716862 2716988 2716862 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2716221 2716304 2716221 ID=MS.gene47287.t1.exon4;Parent=MS.gene47287.t1
chr6.4 CDS 2716221 2716304 2716221 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2715080 2715174 2715080 ID=MS.gene47287.t1.exon5;Parent=MS.gene47287.t1
chr6.4 CDS 2715080 2715174 2715080 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2714467 2714558 2714467 ID=MS.gene47287.t1.exon6;Parent=MS.gene47287.t1
chr6.4 CDS 2714467 2714558 2714467 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2714155 2714208 2714155 ID=MS.gene47287.t1.exon7;Parent=MS.gene47287.t1
chr6.4 CDS 2714155 2714208 2714155 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2713040 2713092 2713040 ID=MS.gene47287.t1.exon8;Parent=MS.gene47287.t1
chr6.4 CDS 2713040 2713092 2713040 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2712880 2712947 2712880 ID=MS.gene47287.t1.exon9;Parent=MS.gene47287.t1
chr6.4 CDS 2712880 2712947 2712880 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2712486 2712561 2712486 ID=MS.gene47287.t1.exon10;Parent=MS.gene47287.t1
chr6.4 CDS 2712486 2712561 2712486 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2711728 2711811 2711728 ID=MS.gene47287.t1.exon11;Parent=MS.gene47287.t1
chr6.4 CDS 2711728 2711811 2711728 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2711002 2711150 2711002 ID=MS.gene47287.t1.exon12;Parent=MS.gene47287.t1
chr6.4 CDS 2711002 2711150 2711002 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2710797 2710914 2710797 ID=MS.gene47287.t1.exon13;Parent=MS.gene47287.t1
chr6.4 CDS 2710797 2710914 2710797 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2710574 2710690 2710574 ID=MS.gene47287.t1.exon14;Parent=MS.gene47287.t1
chr6.4 CDS 2710574 2710690 2710574 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2709847 2710067 2709847 ID=MS.gene47287.t1.exon15;Parent=MS.gene47287.t1
chr6.4 CDS 2709847 2710067 2709847 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2709084 2709173 2709084 ID=MS.gene47287.t1.exon16;Parent=MS.gene47287.t1
chr6.4 CDS 2709084 2709173 2709084 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2708438 2708549 2708438 ID=MS.gene47287.t1.exon17;Parent=MS.gene47287.t1
chr6.4 CDS 2708438 2708549 2708438 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2708120 2708230 2708120 ID=MS.gene47287.t1.exon18;Parent=MS.gene47287.t1
chr6.4 CDS 2708120 2708230 2708120 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2707877 2708014 2707877 ID=MS.gene47287.t1.exon19;Parent=MS.gene47287.t1
chr6.4 CDS 2707877 2708014 2707877 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2706934 2706984 2706934 ID=MS.gene47287.t1.exon20;Parent=MS.gene47287.t1
chr6.4 CDS 2706934 2706984 2706934 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2706744 2706856 2706744 ID=MS.gene47287.t1.exon21;Parent=MS.gene47287.t1
chr6.4 CDS 2706744 2706856 2706744 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2706512 2706665 2706512 ID=MS.gene47287.t1.exon22;Parent=MS.gene47287.t1
chr6.4 CDS 2706512 2706665 2706512 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2705409 2705513 2705409 ID=MS.gene47287.t1.exon23;Parent=MS.gene47287.t1
chr6.4 CDS 2705409 2705513 2705409 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2705211 2705312 2705211 ID=MS.gene47287.t1.exon24;Parent=MS.gene47287.t1
chr6.4 CDS 2705211 2705312 2705211 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2704849 2704921 2704849 ID=MS.gene47287.t1.exon25;Parent=MS.gene47287.t1
chr6.4 CDS 2704849 2704921 2704849 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2704549 2704715 2704549 ID=MS.gene47287.t1.exon26;Parent=MS.gene47287.t1
chr6.4 CDS 2704549 2704715 2704549 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
chr6.4 exon 2703873 2704001 2703873 ID=MS.gene47287.t1.exon27;Parent=MS.gene47287.t1
chr6.4 CDS 2703873 2704001 2703873 ID=cds.MS.gene47287.t1;Parent=MS.gene47287.t1
Gene Sequence

>MS.gene47287

ATGTCTACTACACTTCTCTCTCTTTCATCTTCTTCTTATCCATTCTCCATTTGTAACAAACTCAACCCTCTTCTCTTCTACACCCGCCGTTCTCTCTCTTCTCCTTCTCGCCGCTATCGTAACCGCTTCGCAACCACACCAATGCGTCTTCTCACAACAGGTTCTCTTCTTCGCTTCAATTCATCTTCCTCTTCAATTTTCAGTTTTTCATACACTTGTTCATTTTCGTATATAAACATAATTGAAATATTCGTTTACTGCTGTGAATGAGTTTTTGCTTTTGAATAAGTTAGGGATTGTTTCAAATTTGTATTGGATAGAGGTTTTTGAATTTTGTTACTTCGTGTTGTTCAATTTTCACTGTTTTAAGCACTTTATGCTTGTATTTGCATGAAATGATTGAATTATTAGTTTAATTAAGTGTGTTTTTGATTTTGAATAAGTTAGCGATTGTTTGGATTGAGGTTTTTGAGTTTCGTTATTTTGGTTGTTTAAATGTTACAAGTATAAACACTTTATGCTTATATTTGCGTAAAATAATTGAAGTATTAGTTTAATTGAGTGAGATTTCGCTTTTGAATAAGTTAGAGATAGTTTGGATTGAGGCTTTTGAATTTTGTTATTTGTTGTTTAATTGTTACAATTATAAGCACTTTATGCTTATATTTGCATAGAATAGTTGAAGTACTAGTTTAATTGAGTGATTGGGCTTTGGCTTTTGAATAAGTTAGGGATTGTTTGGATAGACGTTTTTTGAATTTCGTTATTTTGTTTGTCATTTGTCGCCATTTTAGACACTTTATGCTTATCTACTCGTGAAACAATTGAAGTATATTGGTTTAGGGCCTGTTCTGATTTACTTATTTGAGCTTATCTACTGACATAAGTGTTTGGTGAGACTGTTTAGGTGAACTTATGAAAACAGATTATGACATTGTTTGTAAGCTGTTTTCACCTTTTTCGCAAGTCATCCAAAATAACTTATGAAAACAGATTATAGCTTATACAAAAATAATTTTACTTTATTGTATCTTTGCTTACGATAGAAGCAGCTTATACATAAGCGCTTATCATAAACGCTTGTGCTATAAACTGCAAATAAGATGTTTATCCAAACACGTCCTTAATGCAGTGAGTTTTTGCAGGGCTTGTTTGGATAAACGTTTTCAAATTTAGTTACTAGTTTTTTTGTCTGTTTGGTCATGCAGTGACAGGAATGAATTTTGTTGTTTAGTTACAACTGAGTTGAATTTGAAGTGGTTTATTCACGTTAAAGTGAGTTGAACGATAAGTTTTTAATGTAAAAGCCAATTATAGAATCAAAAGCTCAAAATTCTAGCTTTGCATTAGAATCAATTCCATATACAAACTCAATTCTACTTGGAGATGTCCGAACATGTGAATTCGGCACGTCTAGAATCAATTTTGCCCCATCCAAAGTTCAAACCCAACATGCACTTTAATAATTACAATAATTATGGGTTGTGTTCGACTATTACTAAAACGACACCGGATATGATTGACACGTAGATATTGATAATACTGTAAGAAAATAGTAGTAAGGGCAACCCGGTGCACTAGAGCTCCCGCATATGTAGGGTCCGGGAAGGGGTCCCACCATTTGGTGTATTGTACGCAGCCTTACCCTGTTACAAGAGGCTGTTTCCATGACTTGAACCCGTGACCTTTCAGTCACATGACAACAACTTTACCAGTTGCGCCAAGGTTACCCCTCACTGTAAGAAAATAGTAGTGATTGAATATAACTAAATGTGTCTGTATTGTGTTGGATACCAACACTTGTTGGACATTGGCATGTCTCGGATATACTAGACATGCCGTTAGTCTGAAGTGTCGGTCTTATTTATGTTTTTGGGTTGAAAATTTCTGTATAATAATGAGAATAAGATTTTTGGTGATGAAAATATGAACATAACGATATTTAGTTGGTTTTACAGTAACTGGAGTTTTTTGTTTGTGATTGTTTTATGTCTTCAATGTTTCAGTTGCTGCTGCTTCAGAGAATAATGGTGTCTTTACTTCTCCTGAGATAGCCAAAACTTTTGACTTTGCTGCGGAAGAACGCATATATAATTGGTATGTTTTTTTTTTAATTTTTTTTATATAAAGATAAGTGTTGGTATGATTTCTCTTTTTTGTGAATTTTTGATTCAATGTGATATGTGCTCCGAGCAAAATGGCTTATTTTCTTAGTTTTCGCACTAGAACTTTAGTATTGCGTGATTAAATTAGCTAAAGTGAACTGTTGAAGCTAGAAAATGGGGTTTAATAGCTGAGTGGGTGATATGCATTGTATTTGTTGCTATTAATGTAAGAGTCAGAAGTGTGTCAATGGCATCTCGAGAGAGTATCAAAATTCATTTTTTTATTTATTTAGTTAGATTTTTTTAATTTTTAAAAATGGTATCTGATATGGCTCTGACGCGTATCTATGAAATAAAGGTTTATCAGTGCATCATAGGTTGCTGACAAGAGGAAAAAAATGTTACTGTATATAACATTGTGCAATGCATCTAAATTAATTAACCCTTTTCTGTTTTATGTGGGTATAGCCTGTCTCTGATTATATTTATAAGTTGTTTTGGATCATGAATGAGCATTTTGAACTCATAATTATGTTGTTTTTGTATATTTTGTGTTGTTGTAAATAATGTTTTAAATTTAATTATGATTATTGGATGCTAGGTGGGAGTCACAAGGGTATTTTAAGCCGAACTTCGACCGGGGAAGTGATCCTTTTGTGATATCAATGCCACCTCCCAATGTTACTGGATCTTTGCACATGGGGCATGCAATGTTTGTGACCCTTGAGGTTTTTTCAGTTTTTTTTATTATTTTTCTATTTCATTTCATGTATGTTATTACTTACATATTCATGTATCTAGATGGCTGGATGTATCATCATATGGTTTAAATGTTTCTAAATGTTGAGACAAGACGTATAGTGGTAGAGATATACCATTTGATTTGATGCGTCATCTTGCATGTTTGTTTTTGTAATATTTTCATTGTGGTAAGTTTTCATTTTTATTTTTATATTATTTCCAAAGGTAATTGTAACAACGGATTTTGTTCTGGGGCATTTTAAAACTGTTTGATGTGATTCTTCTTAAGTCATGAAATTATGGGGTTAGCTGCTTGTTATTTATGTGAATACGTTTGGTATTGCATTGGGAAAATAAAAGCGATCTTCCTTCCTTAGCTTATGTTCCTTTCTGTCTGTTTGTCTGCATAATGATGTTGTCTGTCCTGTATGAAGTATCAATAATGTGATTTATTAATTGCTATTGAGATGTTAACATTTTTTTTTACGAAATTTCACGTTACTAAGATATATGTTTTTATTTATTATCATGCTTTTTCATCCAGGATATTATGGTTAGGTACAATCGCATGAAGGGAAGACCAACACTTTGGCTTCCTGGGACTGATCATGCTGGTATTGCAACACAGGTTTGTCAATTTCAAAAACCCAATATTATATCAATTTTCATTACTTACTGAGAGGTAGCCAACTACCAGCAATATATAGCCGACCTTAGCCTACACTTAGTAATCTTCATCTGCGCTAACTGCAACTAACTTTCTGAGTTAGTTAAACCTGTACAATCAGCAGCTGTTACATATAATCTATTCGAGAAGAATTCTCACACACCCCTGCATAAGCGCAAAGAGGGTGAGAAACATTAGGTAGTTCATGCACATTGAGTTTGTCCCTGAGCTGGAGAAATATGGTAGGAGACAGACTATGTCAGAGAGTAAGCCCACCATTGATCCTGGGCTAGAACATGCTGTACAATCAATGTGCATTAGTTCATATTAAGGTGGTGGATTGTGCAAGCATATGTTGGAAATTCCGCCTTCATTGCGGTCTGCCCCTAGCCGCCTAATTGCGGCATTTGGATTGCCTTCATTCCAGCTTCCAACACCTTCAATGTGTTGGATTTGAAGGGATGGATTTAGTCCCCAAGCTTTATGAAACACTCCATACACATCCATATCTCTAGGAAAGATCTGTTGTTGGTTCCCGCATCAGGTTTCTGCTATCGGGCCACTCGGGTCACACTCAAGATTTCTAGTCCATGGCGTGAGGGGTGTGTTATAGAGTCCCACATTGGATGAGAGATGACTTGAACATGTGTTTAAAAGTGGGGCTTTTCTCACCTTACAAGCTGGTTGTGTAAGGATGAGTTAGGCCCATTACAAAAAAACCTATAGCATGTAGTACTTGATTAAGGGACACAAATAAACAACACTCTGATTGTTACAATACAGTCTTAGAGTGAGGAAAGGGCACTGATTGTTCTCAAAGTCAGGTCTGAATCCATAGTAAATCACAAGCGGCAGCTGCCAAACTCCTGGATTCATCTTCAGTATTTGACCTTATTATGCAGTTTCCTTTTGTTACAGAGAATTCTATGCTTCTTGCATTTTCTCTTTATATCTTTTAAGTTGAAGATATTAGTTATCCACTCTTAAATTTGGTCTCCTTCTACCAGTTGGTCGTGGAAAGAATGCTAGTTTCTGAAGGAATCAAGAGGGTTGAAATAGGTAGAGATGAATTCACAAGAAGAGTTTGGCAGTGGAAAGAAAAGTATGTCTTCACATCCTTGTTTATCTTCCTGCAATCTACTTTTTTGTTTTTCCACAGCCAATGGACCGCCCTTCTTAAAACAGGGAAAAGTAGAAGGGTTTGAAGCTTATTATTATTCCTATTATTTATGTTAAAAATTTAAATCACAAGAGATTAGAATCTGGAATAGTGTAAAAACTTAGATTTATAAATTTATAAAGAAGATAAATGATAAAATCTGAGACTTGAGAGGCCTCTGTGAAAGCGGTCCTTTTATTTCCAATTTAGCTCAAATCTACAATATACGTTCTCCAAAATCCATATAACCTGATGTCATAATGGTATAGTTTAGAGGAATATGCCATGACCTAATGGCAAAGGAAAATTGGAAATTTTATTGAACTTTTTGTAGATTTGCTTACATTATTTTTAGTTTAGATGAGTCATGACTAATGAGTGTTCTGCATCTTCAGATCATAGATATTGCCTATCATTAAATAACTATATGTAGTGGTGCAATGATTTTTCTTTACTTTATTCAGGTATGGTGGAACTATCACAAATCAGATCAAAAGACTTGGTGCTTCGTGTGATTGGTCTAGAGAGCACTTCACCCTTGATGAACAGCTAAGTCGTAAGATAGTTTTCTACTAATTGGAACTTTAACTTGCTAGGAGAGCTTTTGTCCACATAGTTGAAAAGTTACGGTGATACAAATGAGATAGTAAATATAATTGGTGCAGTTTTTTTTTTAACTTTTTTATATGCTATTCTTATCATTTTCCAATATCCATTACATGCATCTGAATTTGTCTCATTAATTTAAATCCAGCGTGGTTGTGTATTAGCATTTGTTTGTGTAACATATACTGATGGTTTGTAATTTCTGCAGAAGCTGTTGTCGAGGCATTTGTTAGGCTTCATGAGAAAGGCTTGATTTATCAAGGTATAGGCTGAAGTTACATCCTTCCACTATAATATATATTTCATTTGGCATTACACTTTGTTATACACTTCCATATTGCTCGAAACTTTTGAAATATTGGATGGAGTTTGTAGTCATGCTTAGTCAATTTTGTACAAGGAGTCACGTGGAAAGCTCTAGTTAATAATGGAGTTTCTGTTCAAATGATATAACATATATTTGATCTGTAAAGGGTATCAGTGTCAAGCCGTCAGCTAGTGCGTGAAAATGACTTTCCTATAACCATTGGTTAGAACCAAGGGTTGACTTTGAGACGGTATATATTTACCTTGGTATTTGATGTCCTTAACGGGCATGCCCATGAGTCTGTACCTTGATATGTAGAGATATTACTCGAACAAGAAAACCAATTTCATGGAGCAATTTTGTGAACATGCGAATCTGCCTCCCCAATGTGTTTGAAGAGCTTTAAGCTGAGTGATGTACTGACCTTTGACAAGTGTTAAGTAGCGAAAATAGCAGTGTTATAATGCTATTGTGTTGCGGATTTTGCTGAGTCCAATATGAAAATTGCTACGCGATGCAAGTTTTGCTGTAAGGAGCTAAGGGCAATAATAACGACTGCTGTAGTGTTTGCTTGCAGTTATGTCAGACATAGTAAGCATAGCGGGAAACATATAATTTTTTGTTGTTTGTTTTTATTTTTTTTACTAGTTCTAAGAACAAACTGCAATAAATAAAATTCATGAAAAATATGATATTTCATAAATATGAAGACAGTCACTGCAAATTACTAAACTCAACAAACATAGTATAAAAATACACTCCTGCTCTTGCTATTATTAGAGAGGAGTCAAAGGACTGGGGGAAAATAACTGTTTGAGCTAAGAGGACAAAATATAGGAGAAAAACATGTCATAGACAAAAGATGAGCACAATAGAACAGTAGAGTTGGTGAAAATAAAACAGAGTAACCCAAAAAATGGAAGAGATAATGTTGAATTTTGCATAGACACACATGTTATATTCATACTTCATATTATATAGTGCTGTATGTAACACTCTGGCTTCCTTGTACTTCAGGTTCATATATGGTAAATTGGTCACCAACTCTACAGACTGCTGTTTCCGACTTGGTAAGCAGTTTTTTCGTTTTGATTGTACTCTTGTTACTACTTAATTCATAGAATTTTGGATATTTTTATTGAGCCTTTTCTTTTATGCTTAGGAAGTTGAGTATTCAGAAGAATCTGGATATATGTATCATATTAGATATCGCGTTGCTGGAGGTTCAAGGTACATAGTGGATGTGCTCAAAATTATTCAGTGTTTCTATGTATTTTTTTTGTAGAAGCATATCATCTGAAGCAACCTTTAAGCTCATGTTTTGATTATTTATATTTTTTGGGTAGAAATTTTGATTAGATTTTTATTTATATGTTAAAGATTCAATTAGGGTTTTTCTATCATGTGCAAATTCTCACATGTTAAAAAGTTAAAAATAGTAAGTTTGTATTGGAACTTGTGCATTTTATATTAAACATATAGCTACAACACGTCCAGAGACTCTATTTGGTGATAAACATATATCAATTAATATTACTCATTTTATAGGGACGATTGGCTGACTGTAGCTACGACACGTCCAGAGACTCTATTTGGTGATGTGGCATTGGCAGTTAATCCAAAGGTAGGATATAATACTTGTCTTCTTAAGGTGTTGTGCCTTTGGATATAATTTGATACACATGAAATGAAAATTAGATTGTGTTTCCATTGGTAATTGAAATCCATTCACTTGGCCTGCTAAGACAGCACGTGATACATAATTAAACATTTATATTGCCCAGCCCTCCATAAGAAACAAACATGAAAGGAAACATGTAAACATTTACATTGTTATATTTTCAGTACTCGCCAGCATAATATTTCCTGTCATTTTTATCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTCAGTATTAAGTTTTAGTATACTGACTGATTCCACAAATGAATGTGATTCACCAAACCAACAAATGTATTTCTCCAGAATTTCTCATATAGCAAGAACAGCCCTAAAAAAATTGCAATTACTAATTTCTTTGGAATTAATAGTATTGAAGTGCTAGCATTAGCCGTTGCATGATATATATTTTGACCATTTATTTTTAACATTCGATTATGTGTGTGTTTGTCTACAGATGTTAATTGAAATATAATTAGAGAGAAGAGATCAATAAAATAAACTTAGATTGCATATATAATATTATTGAATTAGTTTGCATATATAATTACTTTGAATAAAATAAACTGTTTTTGTTGAAAGGATGACTAATATCTTGTATTCATCACTGAATTGTAGGATGAACGTTATTCAAAGTATATTGGTCAGATGGCAATTGTGCCTCTGACATTTGGACGCCATGTTCCTATTATTGCTGACAAGGTATAAATGTTCCAGTTTATTTAACTGGTGTATATTTTAGTTATTACTGTAGTGCTTGAATACACATTTACACGGATTTCATGTGCTTGAATACACATTTACGTGGATTTCATGTGCTTGAAAATTAGAACAACCCATCAATTGAGTCCCTTAACTATTGCCGACACTTCAGTTTAGTCCCCAAACTATGTAACTATATTAAGTAGTCCCTAAAGTATCTGTCAATTTAGTGTCTGCCATTAAGATGTTAGGACTAAATTGTCGGATTTTGATATAATTTAAGGACTAGATCAACCAATTTCATATAGTCTAAGGACTAATTATATTTATATAGTTTAGGGACTAAATTTGAGAGACGATGATAGTTTAGGGACTAAATTGATGGTTTATTCATAAAGTAATCTGTTTGAGTTGTTTTCTAAGTCTTGCTGTGATGTTCAGCCCTTGGGCCATTTTATCATAGGTGTTAAAGGATTTATTTTACTGTATTGTTCTAGTGATTTTGCAGAAGTTATTTGACAATGTTAATGTAAGTTTCACGCAGTTAGTTAATATTGATTGGTGTTGTGTGTCACAGTATGTTGATAGAGAGTTTGGAACTGGAGTTTTAAAAATTAGTCCAGGACATGATCATAATGACTATCTACTTGCTCGAAAGCTTGGTCTTCCAATACTTAATGTGATGAATAAGGACGGCACATTAAATGAAGTTGCTGGCTTGTACAGGTATTTGTAGGAATTTTTTATTTAGCTGTTGAAGATTTAGCAAAATTATGACTATTACATGAAGCTAATCTCCAAATCCAATATCAGCGGTCTTGATCGATTTGAAGTCAGAAAAAAAATGTGGGCAGAGCTTGAGGAGACAGGGTTAGGTGTGAAAAAGGAACCACACACTTTACGAGTTCCCAGATCTCAGCGTGGTGGAGAAGTGAGACAGCATTTTTCTTAGTTAAGTTTTAGAATTATGAATTGGTATTATATTCTGTCACTGATTCGAATCTCCCACTTGGACATTTTCTTCATTTTACAATTAGGTAATAGAGCCACTTGTTAGTAAACAGTGGTTTGTAAGTATGGAGCCTCTTGCTGAGAAAGCTCTTCAAGCAGTTGAAAAAGGAGAATTGACAATAATTCCCGAAAGATTTGAGAAGGTTTGTCCTCTCTTCTGTAATTTTCCCATTCCCACTTCTCTCTAACTTTCCCTACCAAGGTTTTCATTGTGATGTGACAAATCTAAAATTATAAATGGAATCATGGGTCATGGATTCGATACAAACTATCTAACCATACTTGTTGGGGATTTATTTTCTCAATGCTTTTATTTATTTATATTTCTTCCACTTGCTTCTGTTCTTCTCTCCAGACTTTTCACTTACTCAATTTATCACTGGTGGTTCTACATCACAGTTATTATTATGTTTCCTTAAACAGATCTTTTCCACTTTAATTTCCTTTATTAGGAAAGATTCATGGTGTAGAGTTATATTATAGGAAAGTAGTATTAATAAGGATTAGTATCTGTATGTAAATTCTTATTCTACATTTATGCATCAGAACATAATGTCCAGTAAAATTACTTTTCTAGCATTATTTTGTTGATGGTATAAAGTCTTAGATTATGCCATGCCCTTTCCTTATAAACTTTATGTTCATACAGATTTACAACCATTGGCTTTCCAACATTAAGGATTGGTGTATTAGCAGACAACTATGGTGGGGACACCGGATACCTGTTTGGTATATTGATGGAAAAGACAAAGAAGAGGACTATATAGTTGCTAGGAACACTGATGAAGCACTTGAAAAAGCTCACAAGAAATATGGAAAGGATGTAGAAATATATCAGGATCCTGATGTTCTTGACACTTGGTTTTCAAGGTATTTTATATTAGATATATTTCTTTCTTTGAAATGTATTATATTAGCATCTTCAGACTAAATAGTATTTGTTGATGTACGTTTTTTCTAACCGGTGCTTGTCGTGTGTACGAGTATGGACCGAGTATAAAGCACGAAGTATTAAATATATATTACGAGAGCTGTTGTGTCTTATGCTAGCTATATCGACATGTTTTTCTTTTACACATTGTTCTGTTTGTGCTCCATAAGTAATCGTATATCTAACCCATCTAATGAGTAAATGACACAGGTAAGGTAATTGAAGTTACTAGGGCATCTCTTTTAAAGTCATGTTCTTTCTTCTATTTCTAATAGATGTCATGGCATAAATTTCCCTATATGTTGTCTCTTTACAAGCTCTACCATAGCTTTTTTCGAAAGAGCTCTACCATAGCTTGTTATTTCATTTACATTAAAGATTGTTTAATCTTTTAAAAAATGTTTTCGATTGGCTTTCTAAATACATGTTGCCCAAATCTTTCATTAAAAATACTATGTATAATTTTTTTTAGCAAATCATATAATGCAATTGATCTTTTTCTAAAAATTTATATGTAATGAAGAGATTCGTAAACCTAATGTCAGTAATCACAGCGCATTCTTTTACTCCTGTTAGCTGTATGGACTAACTAATTCTTACATATTTTATCAGCGCGCTGTGGCCTTTTAGTACGCTTGGATGGCCAGATTTGTCTGCAGATGATTTTAAGACGTTCTATCCAACTACAATGCTTGAAACCGGGTATGTGATTACTTGGGTTGTCAGTGTGACACGGTTGGTTTGGGGTGCCATTAGTAAGTTTATCATATGTAAGATGTAATTGCAATCTAGTTCAGGATGGGGTGTTTGATTTGTTTTCGGTTTTAATTTTAGTTAATCACTTTTCATTATGATTACAAAAATATTAATTTGTTTTCATTTTTTATTTTTGTTTCCAAAAGTTTTTCTCTTATGAGCCCAGATAGTTCATTTTCTAGGGTTTTATACACATAATGAAGAATTGATGTTGATGTTTTTGTAAATAAAATATATTCAATCTAAGTATTGTTCATAAAAATACAAAGTATAGTTCATACATTTATTTCTACGAGAAGGCAACTACTCTACCATTTGTTCCGTCCATGTGAATAATGAATGCAATTGCTTTTGTAGGTCATGTTTGTATTTTATCTATCGTAGCCTTGTTTAAGTATTGGTTTCATTTAAAATTATTTCATATTCTAATCCATTCTTTGTGAATATTCTTCCAACTTATGCTGAGTTTTATTTTGACAGGCATGACATATTGTTCTTTTGGGTGGCAAGAATGGTGATGATGGGGATTGAATTCACTGGGAAAGTTCCATTTTCTTATATTTATTTGCATGGACTCATCAGGGATTCACAGGTGACTTCACTTTTTTTGTGCATTTTGAAATTATCATGGTGTTAGCTTGGCTACTTCATTTTATGTGAAGAATGGTGATGGTTTAAACTTCTGTATGCTGTTGGTGCATCAAATCTTTCTTTTTTCAATTTTACTCAGCAACTGTTCCCTGTTTCAAATTTATGCCTTGTCTTTGGGCTCACTATGTAACGACTTTATTATTTTCAGGGGAGAAAAATGTCCAAAACATTGGGAAATGTAATTGACCCCCTTGATACCATCAAAGATTTTGGGACAGATGCTTTGCGATTCACAGTAGCTTTAGGAACAGCTGGCCAGGTTTCTTTTACCGTGTTCAAAAAATTGGTTCTTTTTTTATCCAATGAGGAAGTTGATTACATTATTGAAGACGGTGGTGTGATGGTTTTTCTCTCTTCAATTCAGGACCTTAATTTGTCTACTGAGCGGTTGACCTCCAACAAGGCCTTCACAAACAAATTGTGGAACGCTGGCAAATTTGTATTGCAGAACTTGCCTAAGGAGAATGATGTATCTGCTTGGGAGAATATACTCTCGTATAAGGTTAGATCCAATCTTAGCATCCAAAAGATAGATTGTTAATTTTTTCTGTCTTTTAATAACACATGTTTGCAAGGATGACATGTTAACTCTTTGTAAAGATCTCGTTTCTTGAAGAATTTCTTGTTACATAATTTTTTTTTTATTCTTTTCTTTTGATAAAGAAAAGATGAGGATGTTGTGTTGGATGAGTGGTAAGACTAGACGCGATAGGATTAGGAATGACACCATTAGAGAGAGAGTTGGGGTAGCACCATTAGTAGAAAAGATGGTAGAAAATAGGCTTAGGTGGTTTGGGCATGTAGAGAGAAGACCTGTAGATGCTGTAGTAGAAGAGTAGATCAGATGGAGAGTCAAATCAAAAGAGGTAGAGGAAGAGCTAGAAAAACTATAAGAGAAACTATTAGGAAAAACTTTGAGATTAATGAGTTGGATCCCAATATGCTTTATGATAGAACATTATGGTAATTTGATCCATGTAGCTGACCACAGTTAGTGGGATAAGGCTTGGTTGTTGTTTTTCTTTTGATAAAAGACAAAATTCATTAAGATGAAAGGAAAACATAATTACAGATAACGGAGGATAAGGGATACTTCTCTCGACTAAAGTACAAAACAGAAAGTAATAGAAAAAGTTATTAATAATCAGACGTCAAACACCCAATTATATCCCAATTCTAGTGTTGCATAACACCTTGTAAGTACTAGCATAGTCTAAAGTTTGGATCTGTTGGACTTTTTATTATAGTACTTTCAATTTAATGTGTTACTTTAACATGGAAAATTTAGTTAATAGTTTAATACTGCTTCTTCTGTTCATTTTTGTTCAACATCTGTTTAGCTAATACTAATCTACCTTTTCTCTCAACTAATACTTCCAATTTACTGTTCTCAGTTTGACACTGAAGACTCTGTACTTAATCTTCCTTTACCAGAGCGTTGGGTGGTAAGGAAATTTTGTTTTAACATTTTCTTATGTCACTATTTGGACATCTGTGTGATAATTTTACTTCCTCTTTTCAGGTTTCAAAACTTCACTTGCTTATTGAATCTGCTACTGCAAACTATGACAAATTTTTCTTTGGAGAAGTGGGAAGAGAAACATATGATTTCTTTTGGGCCGATTTTGCTGATTGGTATGTTGCTTTGTAGGGCTTTCTTTGCCTTCATTGTGAGTAATACTCTCTAAATCTTTTCCACTCTCTGCTCTTAAGGTACATTGAGGCTAGCAAAGGGCGGCTTTACAACTCTGGCAATGGTGGCAACTCTGCTGCTTTAATGGCACAGGCTGTTTTATTGTATACTTTTGAGAACATACTCAAAGTGCTGCATCCTTTCATGCCATTTGTAACTGAGGAGCTATGGCAGGTAAATATGACATGGCCTATATAGTACAGCACCAACAGATCAATAGGGATTCTATAAAACCACCCTATGCGGTGATAGTTACCGTACCAACAGACATAAAGTTCTCTTTGTGATCCTTTCTACTTTGTTACTGTGCCTTCACTAGGGTTGAAACCCTGGTTTTTCTCCGGCAGCACATCCTCTGACAGTGTTTTTCTCCCCATTGGTCACACAATGACACAATTCAATTGTGTGCCCTCACTTTAGCATTGTCCATGCTTTCGAATGCTTGTTTTCCTTTGATTTGTGAATGCTTTAGATATAAAACCATTCACATGACTTCACTTAATACCTTGAGTTTTTGGATTGGTTGTTCATGAATCACTATATACTGAAGTTAGGCCTTTATGAATCATTATCTTACAAGCAGGTTTTGTAAGGTTGAGTTAGGCCCAACTTAAATTCTAAGAATGACCATATGGTCTAGAGGTTTAAGCTTGTTACCCCCATTACTATAAATGAAAGAAGTTAAATTTCAGTGCAAATTATGGGAGTTTGAACCTTGTTTCTCCCATACTCGAGGATTCCTTTTTGAAAGTATGGGAAGCAGGGTAGGAGATAAAACCATTTATGTACCTAAAGCAGTGCCAACTGAAAATTCAAGAAAAATCTAATTTATCTCAACATTACTTCAAATTCGGTTTATTTGTGTTTTTTATTTTTTTGAGGGAGTGTTTATTTATGTTTGATCATAGAAAAAATATCTTGATCTTATCTTACAGTATTTTAGATCATCTAATAGGAGTTGGTTATTATTTTCCTTATTTGATTAGGATTAGGAGTCTAGTATTAATATAAATAATGGTTTGCTTTTACTCTTTTGCATCATAATATCAAACTAATCATAATTCAAAGCCTTGGATTCTTTATACTCCCTTCTTTCTTACCTAAAACCCTATATAACTTGAAAATTATAATGCAAGTTTTTCAAAGTTTCAATTTCTTTGTTTTGTCAACAGGCACTCCCTAACCGGACGCATGCCCTTATTGTATCACCTTGGCCAGAGACCAAACTTCCAAGGTGTACCAGCTCTGTAAAAAAGTTCGAAAATTTGCAAACTTTGGTGTGTTTATCTCCTTATTTTCTTCTCTCGTCCCGTTCACACAACTTTTTAACATTATTTAATGTACTGATGACAGCTTATTTTTTAATGTCTTAGGTTAGAGCTATCAGAAATATTCGGGCAGAATATTCCGTTGAGCCTGCGAAACGAATATCAGCATCCGTGGTTGCAAGCAATGAAGTTATTAAATATATTGCTGTAAGTGTGGTTTACTCCTCATTTCTCAGGCACTTTCTTTGAATTGGAATTTTTAAACCCCAATATGATTTTTTTCTTTTCAAATATAAACCTGCAAATTATTCTTTTGCTATTTTTCATTTTTTATCTCGCTGCAAATAACATTACCTGCCCCATTATTAGAGGCATCACTTGATTTCTAAGCAATACAAGAACTGTGACCCTTGTGATGGAAGTCTTAGACTTTCTCTTATCCTTTTTCTCTTGGGATATAGTAAGTAATGTTATGCTGCATCATGTGGTTCTTCAGGAAGAAAAAGAGGTTTTAGCACTTCTCTCTCGGCTGGATCTACAAAATTTGCATTTCATGAATTCTTCCCCAGGTATGCTTTCGACTTCACTTTGTACTCCCTGGGTTAAAAGTGAAATGACGTTTCTGTTTTATGTGTTTCTCATGTTAATTGTTAACTGGTCATTAAGTCATTTATTTGGTGGATGTCATGTAATATCCTTCAGGAAATGCTGATCAATCAGTTCATCTTGTGGCTGGGGAAGGACTAGAGGCATATCTCCCTTTGGCCGATATGGTTGATATTTCTGCAGAAGTTCAACGTCTATCAAAGCGCCTTGTGAAGATGCAGAAGGAGTATGATGGAATGATAGCTAAACTAAATTCCCCAAAAGTATGAAATAATATATTTCTTACCTTCTGCACTATATAGACCTGAATAAACGGTTTTGTTCCATGGTCCTCCATATATGCTTTTTAAGTATTAAAATCAGTTTGAGAACCCATTTCAATGCACCGCTGATTAAATCTAGATGCATACGGTATCTACTACTTTTATTATTGCTTGCCTTCCAAAAGCCATACGGTATCTACTATATATAGGAGTCCATGACCTGCTAACCAAGACAGACAATTCATAGGATTTTCCCTAAAATAAGCTAATCAGACCAATTATTATCTGAAACCACTTTTGTCTTAACATTTATAAACACAAGAACCGCAGCTTCATTCTCAATCTGTTCAGAAATATAGTTCAGATTAGACTCAAATTCTCTCTACATTATTTTTGTCACCTTTTCGCATACTCTCCGATTACTAACTTTAATAGTCAGAAAGATGTGGATTTTTGCATTATACTAGAATAGTTTATGTGGATTCTTCTGGAATTTGTGTACAAAAGTAATCTGTGCCAATTAACTATTGTCTAACACTTTCTGCAGTTCGTAGAGAAAGCTCCGGAAGAGGTGGTCCGTGCAGTGCGAGAAAAAGCAACGGAAGCCGAAGAAAAGATTACTTTAACCAAAAACCGTCTTGAATTTCTGAACTCTAATGTTCTAATTTCAAAATAG

Protein sequence

>MS.gene47287.t1

MSTTLLSLSSSSYPFSICNKLNPLLFYTRRSLSSPSRRYRNRFATTPMRLLTTVAAASENNGVFTSPEIAKTFDFAAEERIYNWWESQGYFKPNFDRGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLVSEGIKRVEIGRDEFTRRVWQWKEKYGGTITNQIKRLGASCDWSREHFTLDEQLSQAVVEAFVRLHEKGLIYQGSYMVNWSPTLQTAVSDLEVEYSEESGYMYHIRYRVAGGSRDDWLTVATTRPETLFGDVALAVNPKDERYSKYIGQMAIVPLTFGRHVPIIADKYVDREFGTGVLKISPGHDHNDYLLARKLGLPILNVMNKDGTLNEVAGLYSGLDRFEVRKKMWAELEETGLGVKKEPHTLRVPRSQRGGEVIEPLVSKQWFVSMEPLAEKALQAVEKGELTIIPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIDGKDKEEDYIVARNTDEALEKAHKKYGKDVEIYQDPDVLDTWFSSALWPFSTLGWPDLSADDFKTFYPTTMLETGHDILFFWVARMVMMGIEFTGKVPFSYIYLHGLIRDSQGRKMSKTLGNVIDPLDTIKDFGTDALRFTVALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPKENDVSAWENILSYKFDTEDSVLNLPLPERWVVSKLHLLIESATANYDKFFFGEVGRETYDFFWADFADWYIEASKGRLYNSGNGGNSAALMAQAVLLYTFENILKVLHPFMPFVTEELWQALPNRTHALIVSPWPETKLPRCTSSVKKFENLQTLVRAIRNIRAEYSVEPAKRISASVVASNEVIKYIAEEKEVLALLSRLDLQNLHFMNSSPGNADQSVHLVAGEGLEAYLPLADMVDISAEVQRLSKRLVKMQKEYDGMIAKLNSPKFVEKAPEEVVRAVREKATEAEEKITLTKNRLEFLNSNVLISK