AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49811

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49811.t1 MTR_6g027920 98.170 765 14 0 1 765 1 765 0.0 1553
MS.gene49811.t1 MTR_7g086300 87.270 762 97 0 1 762 41 802 0.0 1372
MS.gene49811.t1 MTR_3g079640 84.252 762 120 0 4 765 52 813 0.0 1353
MS.gene49811.t1 MTR_7g086300 86.285 576 79 0 1 576 1 576 0.0 1016
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49811.t1 AT5G17920 87.059 765 99 0 1 765 1 765 0.0 1413
MS.gene49811.t1 AT5G17920 87.059 765 99 0 1 765 1 765 0.0 1413
MS.gene49811.t1 AT3G03780 85.882 765 108 0 1 765 1 765 0.0 1388
MS.gene49811.t1 AT3G03780 85.882 765 108 0 1 765 1 765 0.0 1388
MS.gene49811.t1 AT3G03780 85.882 765 108 0 1 765 1 765 0.0 1388
MS.gene49811.t1 AT5G20980 79.106 761 159 0 1 761 49 809 0.0 1283
MS.gene49811.t1 AT5G20980 79.106 761 159 0 1 761 49 809 0.0 1283

Find 245 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTTGCCTTCACTGTTAA+TGG 0.131956 6.3:+19873266 MS.gene49811:CDS
ACTGGGCTGTCCATTCTTTC+AGG 0.146160 6.3:+19873726 MS.gene49811:CDS
TAAGACTGTTGATTTGATTA+AGG 0.210765 6.3:+19871993 MS.gene49811:CDS
AGTTCGCCCTCGAGTCATTC+TGG 0.216599 6.3:+19870718 MS.gene49811:CDS
CGTCGCACCCTCCTCAATTC+AGG 0.250163 6.3:-19872870 None:intergenic
CTTCAGTGGGTGGTATTCTT+GGG 0.256744 6.3:-19874262 None:intergenic
TTGTATACTGCAATGACTTT+TGG 0.258249 6.3:-19871638 None:intergenic
GAAGAGCAGCGCCGAGGATT+TGG 0.260072 6.3:+19870746 MS.gene49811:CDS
GATCTTGCTTCCGCTTTATC+TGG 0.263979 6.3:+19871859 MS.gene49811:CDS
TCAAAGCAGCCTCATCAATT+TGG 0.273412 6.3:-19873658 None:intergenic
TCTTCAGTGGGTGGTATTCT+TGG 0.276569 6.3:-19874263 None:intergenic
TACTTTGGTGAGCAGTTATC+AGG 0.280762 6.3:+19873245 MS.gene49811:CDS
CCAATGAAGGGAATGCTTAC+TGG 0.290098 6.3:+19873407 MS.gene49811:CDS
TTCACATCAGGTCCCAATTC+GGG 0.300933 6.3:-19871140 None:intergenic
TCAACCATGGCAGTGAGGGC+TGG 0.302541 6.3:-19874389 None:intergenic
TTCATTGCAGAGAAATGATA+TGG 0.303786 6.3:+19873217 MS.gene49811:intron
CTCATAGGCTGCTGCATTGA+AGG 0.321373 6.3:+19872737 MS.gene49811:intron
CATTCCCTTCATTGGGCGTT+TGG 0.334822 6.3:-19873399 None:intergenic
AAGATCCTCACAGGTCTTAC+TGG 0.337699 6.3:+19871934 MS.gene49811:CDS
AAGACTGTTGATTTGATTAA+GGG 0.343641 6.3:+19871994 MS.gene49811:CDS
CTCTTCTAACGCTGCAGCTC+TGG 0.343861 6.3:+19872582 MS.gene49811:CDS
GGTTGATTACCTCATCCTTT+TGG 0.344222 6.3:-19872414 None:intergenic
CCACTACATTGTCCCCGAAT+TGG 0.344256 6.3:+19871127 MS.gene49811:CDS
GGCGAACTTGAGCTCTCTCT+TGG 0.344890 6.3:-19870703 None:intergenic
CTGACCTCAGGGCATCTATC+TGG 0.346292 6.3:+19870781 MS.gene49811:CDS
GTTAAGTATGGCGCTGGAAT+TGG 0.350124 6.3:+19874215 MS.gene49811:CDS
GAGAGCAACAAGTATGATAC+TGG 0.354222 6.3:-19871566 None:intergenic
CCAGTAAGCATTCCCTTCAT+TGG 0.357787 6.3:-19873407 None:intergenic
AATGGATGGGTGCAATCTTA+TGG 0.358906 6.3:+19873284 MS.gene49811:CDS
TCTTCTCTGACTACATTAAA+CGG 0.359759 6.3:+19872090 MS.gene49811:CDS
CTAAGGCAATGACCGTCTTC+TGG 0.362564 6.3:+19873354 MS.gene49811:CDS
TTAAGGCAGCCGGGGCTTCA+TGG 0.368146 6.3:+19871761 MS.gene49811:CDS
CAACCATGGCAGTGAGGGCT+GGG 0.374380 6.3:-19874388 None:intergenic
TTGTTCGCTGGAGTAGTTGA+TGG 0.381803 6.3:+19872039 MS.gene49811:CDS
TAGTTGATGGAAGGAACATT+TGG 0.386006 6.3:+19872052 MS.gene49811:CDS
GACCGTCTTCTGGTCATCTA+TGG 0.387644 6.3:+19873364 MS.gene49811:CDS
CACTACATTGTCCCCGAATT+GGG 0.388330 6.3:+19871128 MS.gene49811:CDS
GCGAACTTGAGCTCTCTCTT+GGG 0.389464 6.3:-19870702 None:intergenic
AGAAGGTGGCTGCTGACCTC+AGG 0.394541 6.3:+19870769 MS.gene49811:CDS
TTTCACATCAGGTCCCAATT+CGG 0.395805 6.3:-19871141 None:intergenic
ACTTTAAATGCTTACCGCCT+TGG 0.405262 6.3:-19871207 None:intergenic
CCGCCGGTCCATCCGTATCT+AGG 0.411426 6.3:-19870903 None:intergenic
CAGTAAGCATTCCCTTCATT+GGG 0.413257 6.3:-19873406 None:intergenic
CTTACTGGTGTCACAGCATT+CGG 0.416903 6.3:+19871949 MS.gene49811:CDS
ATCAACACCGTTAGCAGGCT+TGG 0.417649 6.3:-19871588 None:intergenic
TCAGATTGCTTTGGCTATCA+AGG 0.421082 6.3:+19873595 MS.gene49811:CDS
GGAAGTTGTGGCTGATCTTA+AGG 0.421801 6.3:+19871744 MS.gene49811:CDS
CGTTCAACTTGGGTGATTCA+AGG 0.422273 6.3:-19871816 None:intergenic
GGATGGACCGGCGGTGAGAT+TGG 0.424784 6.3:+19870912 MS.gene49811:CDS
GCCCTGTCACCATTCTCAAT+TGG 0.428135 6.3:+19873429 MS.gene49811:CDS
CAGTCTAGCGCTGACATTTG+TGG 0.428315 6.3:-19872778 None:intergenic
TGCCTTCACTGTTAATGGAT+GGG 0.430204 6.3:+19873271 MS.gene49811:CDS
TTCCACTTGCAAGCTGGTTG+CGG 0.432829 6.3:-19874427 None:intergenic
CTTGGAGCTCAACGACTTGA+CGG 0.434452 6.3:-19873040 None:intergenic
TTCCGTGATGGAGTTAAGTA+TGG 0.439738 6.3:+19874203 MS.gene49811:CDS
TTGCCTTCACTGTTAATGGA+TGG 0.442821 6.3:+19873270 MS.gene49811:CDS
CTCTCAGCAATTTCTTCAGT+GGG 0.444877 6.3:-19874275 None:intergenic
GTGGCTGATCTTAAGGCAGC+CGG 0.446834 6.3:+19871751 MS.gene49811:CDS
ATCTGAACAAGCTCACTACT+TGG 0.448267 6.3:+19873703 MS.gene49811:CDS
GATACTGGGCCAACGAGGAC+TGG 0.448664 6.3:-19871551 None:intergenic
CTTCTCTGACTACATTAAAC+GGG 0.450423 6.3:+19872091 MS.gene49811:CDS
ACAGCCTCGTTGGTCACTCT+TGG 0.455017 6.3:-19872622 None:intergenic
GCTTGTTCAGATTTCCTCAA+TGG 0.462081 6.3:-19873692 None:intergenic
ATGGTCGTGGTTGGAAGGAC+AGG 0.463252 6.3:-19872828 None:intergenic
CAAGGCATTGGCTGGCCAAA+AGG 0.464757 6.3:+19872399 MS.gene49811:CDS
AACAAGCTCACTACTTGGAC+TGG 0.465231 6.3:+19873708 MS.gene49811:CDS
CATTGGTGATCCTGAAAGAA+TGG 0.469994 6.3:-19873736 None:intergenic
CAGAAGACGGTCATTGCCTT+AGG 0.471991 6.3:-19873353 None:intergenic
AGTTGATGGAAGGAACATTT+GGG 0.472016 6.3:+19872053 MS.gene49811:CDS
GTCGCACCCTCCTCAATTCA+GGG 0.472379 6.3:-19872869 None:intergenic
GCATTGGCCAAGGCATTGGC+TGG 0.472455 6.3:+19872391 MS.gene49811:CDS
GTGAAGCCACCAATCATCTA+TGG 0.474426 6.3:+19873317 MS.gene49811:CDS
AATGATATGGTTGAGTACTT+TGG 0.476014 6.3:+19873230 MS.gene49811:CDS
GACTTGCTATCAGATTGCTT+TGG 0.476061 6.3:+19873586 MS.gene49811:CDS
TTTAATCTCATTATCCAGCT+TGG 0.477203 6.3:-19872326 None:intergenic
TGGCTGATCTTAAGGCAGCC+GGG 0.481085 6.3:+19871752 MS.gene49811:CDS
CCTCTCAGCAATTTCTTCAG+TGG 0.481757 6.3:-19874276 None:intergenic
GTTCGCCCTCGAGTCATTCT+GGG 0.484602 6.3:+19870719 MS.gene49811:CDS
TTCAGTGGGTGGTATTCTTG+GGG 0.485774 6.3:-19874261 None:intergenic
GAGTGAATGTCATAAACTCC+GGG 0.485839 6.3:-19874239 None:intergenic
CCTCAGGCTCTCCGTGTACA+AGG 0.488358 6.3:-19873082 None:intergenic
AAACGCATTGGCCAAGGCAT+TGG 0.490445 6.3:+19872387 MS.gene49811:CDS
TGAGAGAAGGGTTGCCATTG+AGG 0.496632 6.3:+19873678 MS.gene49811:CDS
CACAAATGTCAGCGCTAGAC+TGG 0.500155 6.3:+19872779 MS.gene49811:CDS
GTCCTTCCAACCACGACCAT+TGG 0.500531 6.3:+19872831 MS.gene49811:CDS
CGTAGAATTTATACCTAGGT+TGG 0.501132 6.3:-19873469 None:intergenic
GATCACCAATGTTGGTGTGC+AGG 0.501767 6.3:+19873748 MS.gene49811:CDS
AATTTGGATAACAGTAATAC+CGG 0.501975 6.3:-19873642 None:intergenic
GATGGATCAACACCGTTAGC+AGG 0.502985 6.3:-19871593 None:intergenic
AGCCCTCACTGCCATGGTTG+AGG 0.503520 6.3:+19874391 MS.gene49811:CDS
CTCCATCACGGAACACCCTT+AGG 0.505583 6.3:-19874193 None:intergenic
TGCAGCGTTAGAAGAGAAGA+AGG 0.509320 6.3:-19872575 None:intergenic
CTTACTTTCCACTTGCAAGC+TGG 0.510199 6.3:-19874433 None:intergenic
CTCACATCACCATAGATGAT+TGG 0.510249 6.3:-19873326 None:intergenic
TCCCTCAGACCCCTGAATTG+AGG 0.512388 6.3:+19872859 MS.gene49811:CDS
GTTCTGATGAAAAGCTCCTA+AGG 0.512466 6.3:+19874177 MS.gene49811:CDS
ACTGTTGATTTGATTAAGGG+TGG 0.512781 6.3:+19871997 MS.gene49811:CDS
TGCAGTAAATGCGTTCAACT+TGG 0.513536 6.3:-19871827 None:intergenic
GATATACTTGATCCCGGCAC+TGG 0.515431 6.3:-19870814 None:intergenic
GAGGAGAGTAAGAAGATCAA+AGG 0.515965 6.3:-19871615 None:intergenic
CAAGGCTGTGAATGAATACA+AGG 0.516730 6.3:+19871181 MS.gene49811:CDS
GATGAGGCTGCTTTGAGAGA+AGG 0.517170 6.3:+19873665 MS.gene49811:CDS
CTAGTTGGTGTCGAACCACT+TGG 0.518118 6.3:-19870994 None:intergenic
GGCCTCAACCATGGCAGTGA+GGG 0.518147 6.3:-19874393 None:intergenic
CATGACCAAACGCCCAATGA+AGG 0.519465 6.3:+19873394 MS.gene49811:CDS
CTCCTCAATTCAGGGGTCTG+AGG 0.521845 6.3:-19872861 None:intergenic
CTCCTAAGGGTGTTCCGTGA+TGG 0.523706 6.3:+19874191 MS.gene49811:CDS
TAACGCTTCCGTCCCTGCGA+TGG 0.523844 6.3:+19870965 MS.gene49811:CDS
ATGAGGCTGCTTTGAGAGAA+GGG 0.524459 6.3:+19873666 MS.gene49811:CDS
CACTTTCGCATACTATGATC+AGG 0.524644 6.3:+19870845 MS.gene49811:CDS
AGGATCTTGTATGCCTCAGC+AGG 0.525443 6.3:-19871919 None:intergenic
CGCCGAGGATTTGGAGAAGG+TGG 0.525687 6.3:+19870755 MS.gene49811:CDS
CACTTGGTCATCTCCATCGC+AGG 0.525792 6.3:-19870978 None:intergenic
TCATAGGCTGCTGCATTGAA+GGG 0.527586 6.3:+19872738 MS.gene49811:intron
CTATGTTAAGTCAATGAAAG+AGG 0.529424 6.3:+19873013 MS.gene49811:CDS
GACCAATTGAGAATGGTGAC+AGG 0.529832 6.3:-19873431 None:intergenic
ATCCAATGGTCGTGGTTGGA+AGG 0.530521 6.3:-19872833 None:intergenic
TTATTAATTCAGGGAAGTTG+TGG 0.533029 6.3:+19871732 MS.gene49811:intron
TTGTGGGTCAATCCCGATTG+TGG 0.533666 6.3:+19874335 MS.gene49811:CDS
GCATAAGTGAATTTCACATC+AGG 0.533790 6.3:-19871152 None:intergenic
AACATTTAAACCAGATAAAG+CGG 0.533932 6.3:-19871869 None:intergenic
GATGGAGTTAAGTATGGCGC+TGG 0.534516 6.3:+19874209 MS.gene49811:CDS
TTCGGATTTGATTTAGTCCG+TGG 0.534660 6.3:+19871967 MS.gene49811:CDS
AGTGGAAAATACTTGTTCGC+TGG 0.538956 6.3:+19872027 MS.gene49811:CDS
TGGAAACAGATGTCCAGTGC+CGG 0.539760 6.3:+19870801 MS.gene49811:CDS
TCTCTCTTGGGGCCCATGCG+AGG 0.542482 6.3:-19870690 None:intergenic
AGCAGGAATGTCGGCAAAGT+AGG 0.543007 6.3:-19871902 None:intergenic
TAGTATGCGAAAGTGTTGCT+AGG 0.543484 6.3:-19870837 None:intergenic
TCCTCAATTCAGGGGTCTGA+GGG 0.544148 6.3:-19872860 None:intergenic
GGAAACAGATGTCCAGTGCC+GGG 0.544517 6.3:+19870802 MS.gene49811:CDS
CTCAATACCACCGCCATGGT+CGG 0.544803 6.3:+19870870 MS.gene49811:CDS
AAAATGGCATCACACATTGT+TGG 0.545749 6.3:+19870663 None:intergenic
TGGTGATGTGAGCCGTCCTA+AGG 0.546492 6.3:+19873337 MS.gene49811:CDS
TCTGACTACATTAAACGGGC+TGG 0.546836 6.3:+19872095 MS.gene49811:CDS
TCTTGTTAACGAGACCAAGC+TGG 0.548001 6.3:+19872312 MS.gene49811:CDS
GAAGGTGGCTGCTGACCTCA+GGG 0.550007 6.3:+19870770 MS.gene49811:CDS
AGGGACGGAAGCGTTACCTC+TGG 0.551448 6.3:-19870958 None:intergenic
GAGGGTGCGACGTGAATACA+AGG 0.553100 6.3:+19872881 MS.gene49811:CDS
CTGGAAGGCATCGTCGGCAA+AGG 0.556764 6.3:+19872114 MS.gene49811:CDS
GAACCCAGCCCTCACTGCCA+TGG 0.558468 6.3:+19874385 MS.gene49811:CDS
TCTTTCAGGATCACCAATGT+TGG 0.558869 6.3:+19873740 MS.gene49811:CDS
AGCCTTCTGAACAGCCTCGT+TGG 0.559766 6.3:-19872632 None:intergenic
GACCAACGAGGCTGTTCAGA+AGG 0.561460 6.3:+19872630 MS.gene49811:CDS
AAGGATCCAATGGTCGTGGT+TGG 0.563856 6.3:-19872837 None:intergenic
CAGCGCCGAGGATTTGGAGA+AGG 0.564983 6.3:+19870752 MS.gene49811:CDS
TCAAGGTCTAAGACAAGTGT+AGG 0.565344 6.3:-19871799 None:intergenic
ATCAAATCCAATCTCACCGC+CGG 0.566436 6.3:-19870919 None:intergenic
TCAGCAATTTCTTCAGTGGG+TGG 0.566654 6.3:-19874272 None:intergenic
TTGCTCTCCAAGCCTGCTAA+CGG 0.567579 6.3:+19871581 MS.gene49811:CDS
CATCCACTCAATCATTGACA+TGG 0.567620 6.3:+19874124 MS.gene49811:CDS
GAGAGTAGCACATGTGGGTG+TGG 0.568344 6.3:-19874088 None:intergenic
AGCCACCTTCTCCAAATCCT+CGG 0.568424 6.3:-19870757 None:intergenic
CGAACTTGAGCTCTCTCTTG+GGG 0.569072 6.3:-19870701 None:intergenic
ATTTGATACCTACTTCTCCA+TGG 0.569081 6.3:+19870935 MS.gene49811:CDS
TGGATAATGAGATTAAATCA+TGG 0.569091 6.3:+19872332 MS.gene49811:CDS
TGAAGTAAACGCATTGGCCA+AGG 0.569862 6.3:+19872381 MS.gene49811:CDS
GGAGTGAATGTCATAAACTC+CGG 0.569880 6.3:-19874240 None:intergenic
ACCTCTGGCCATGGAGAAGT+AGG 0.570023 6.3:-19870943 None:intergenic
TTGTTCGTAATGACCAACCT+AGG 0.571289 6.3:+19873456 MS.gene49811:CDS
AGAGTAAGAAGATCAAAGGA+TGG 0.573211 6.3:-19871611 None:intergenic
ATTGGCTGGCCAAAAGGATG+AGG 0.573282 6.3:+19872405 MS.gene49811:CDS
AGTATCCTGCACACCAACAT+TGG 0.573572 6.3:-19873753 None:intergenic
TACTGTTATCCAAATTGATG+AGG 0.574165 6.3:+19873649 MS.gene49811:CDS
GGTCATCTCCATCGCAGGGA+CGG 0.574362 6.3:-19870973 None:intergenic
CTCAGACCCCTGAATTGAGG+AGG 0.574882 6.3:+19872862 MS.gene49811:CDS
AACAAAGGACCAATTGAGAA+TGG 0.575012 6.3:-19873438 None:intergenic
GGTGCTGTTCCACCTAGATA+CGG 0.576735 6.3:+19870891 MS.gene49811:CDS
AACAGCACCGACCATGGCGG+TGG 0.576896 6.3:-19870877 None:intergenic
CTCGTTGGTCACTCTTGGAG+AGG 0.577579 6.3:-19872617 None:intergenic
GGCTGATCTTAAGGCAGCCG+GGG 0.578111 6.3:+19871753 MS.gene49811:CDS
ACATCACCATAGATGATTGG+TGG 0.578253 6.3:-19873323 None:intergenic
ATGACCAAACGCCCAATGAA+GGG 0.580031 6.3:+19873395 MS.gene49811:CDS
CAATTCAGGGGTCTGAGGGA+AGG 0.584337 6.3:-19872856 None:intergenic
CACCCATCCATTAACAGTGA+AGG 0.585556 6.3:-19873273 None:intergenic
CATTGTTGGATATCCTCGCA+TGG 0.585620 6.3:+19870677 MS.gene49811:CDS
AGTATGCGAAAGTGTTGCTA+GGG 0.586639 6.3:-19870836 None:intergenic
CCACCTAGATACGGATGGAC+CGG 0.588262 6.3:+19870900 MS.gene49811:CDS
GGAAGCGTTACCTCTGGCCA+TGG 0.589125 6.3:-19870952 None:intergenic
AGGGAAGGATCCAATGGTCG+TGG 0.589762 6.3:-19872841 None:intergenic
AGTCGTTGAAGTAAACGCAT+TGG 0.591214 6.3:+19872375 MS.gene49811:CDS
TATGGCGCTGGAATTGGCCC+CGG 0.591666 6.3:+19874221 MS.gene49811:CDS
TGGCCTCAACCATGGCAGTG+AGG 0.592981 6.3:-19874394 None:intergenic
GCTAGGGATATACTTGATCC+CGG 0.593091 6.3:-19870820 None:intergenic
AACGGGCTGGAAGGCATCGT+CGG 0.593221 6.3:+19872108 MS.gene49811:CDS
CTTTGCCGACATTCCTGCTG+AGG 0.594935 6.3:+19871906 MS.gene49811:CDS
ATCCGCAACCAGCTTGCAAG+TGG 0.598138 6.3:+19874425 MS.gene49811:CDS
GATATCGATGTCCTTGTACA+CGG 0.598490 6.3:+19873071 MS.gene49811:CDS
TCGCTGGAGTAGTTGATGGA+AGG 0.600732 6.3:+19872043 MS.gene49811:CDS
GAGGCATACAAGATCCTCAC+AGG 0.601009 6.3:+19871925 MS.gene49811:CDS
GGTCTGAGGGAAGGATCCAA+TGG 0.603824 6.3:-19872847 None:intergenic
AGTGAGGGCTGGGTTCACCT+CGG 0.604467 6.3:-19874378 None:intergenic
TTCTGATGAAAAGCTCCTAA+GGG 0.605088 6.3:+19874178 MS.gene49811:CDS
TTCATTCACAGCCTTGTGAG+AGG 0.608013 6.3:-19871174 None:intergenic
AAATTGAATCCATGAAGCCC+CGG 0.608485 6.3:-19871770 None:intergenic
AGCAATCTGATAGCAAGTCT+CGG 0.611346 6.3:-19873582 None:intergenic
AGTGTGGAGAAGTGAGCAAG+AGG 0.611685 6.3:-19872281 None:intergenic
ACTACATTAAACGGGCTGGA+AGG 0.611688 6.3:+19872099 MS.gene49811:CDS
TCACATCAGGTCCCAATTCG+GGG 0.616591 6.3:-19871139 None:intergenic
GCAGTAAATGCGTTCAACTT+GGG 0.617258 6.3:-19871826 None:intergenic
ATTAAGGGTGGATTTCCTAG+TGG 0.618636 6.3:+19872009 MS.gene49811:CDS
CCAATTCGGGGACAATGTAG+TGG 0.620709 6.3:-19871127 None:intergenic
CTGTTCCACCTAGATACGGA+TGG 0.623778 6.3:+19870895 MS.gene49811:CDS
GTATGCCTCAGCAGGAATGT+CGG 0.624122 6.3:-19871911 None:intergenic
CATCCATGTCAATGATTGAG+TGG 0.624571 6.3:-19874127 None:intergenic
ATTGTTGGATATCCTCGCAT+GGG 0.629417 6.3:+19870678 MS.gene49811:CDS
CGCCATACTTAACTCCATCA+CGG 0.631274 6.3:-19874205 None:intergenic
GACACAATTCCAGTCCTCGT+TGG 0.632528 6.3:+19871542 MS.gene49811:CDS
CCTTGTACACGGAGAGCCTG+AGG 0.633977 6.3:+19873082 MS.gene49811:CDS
ACCTACTTCTCCATGGCCAG+AGG 0.634334 6.3:+19870942 MS.gene49811:CDS
AGGTTGGTCATTACGAACAA+AGG 0.635061 6.3:-19873453 None:intergenic
ACAAGCTCACTACTTGGACT+GGG 0.635309 6.3:+19873709 MS.gene49811:CDS
TGACATTTGTGGCACGACGA+TGG 0.636880 6.3:-19872767 None:intergenic
ATTCACTTATGCCTCTCACA+AGG 0.638880 6.3:+19871163 MS.gene49811:CDS
AGACGGTCATTGCCTTAGGA+CGG 0.640342 6.3:-19873349 None:intergenic
AGGTGGAACAGCACCGACCA+TGG 0.640590 6.3:-19870883 None:intergenic
AATCAACAGTCTTAGCTCCA+CGG 0.644960 6.3:-19871984 None:intergenic
CTTATCCCAGAATGACTCGA+GGG 0.646103 6.3:-19870724 None:intergenic
GAATGAATACAAGGAAGCCA+AGG 0.646164 6.3:+19871190 MS.gene49811:CDS
ACCAATTGAGAATGGTGACA+GGG 0.646821 6.3:-19873430 None:intergenic
TCGCACCCTCCTCAATTCAG+GGG 0.651181 6.3:-19872868 None:intergenic
TCGTGGTTGGAAGGACAGGA+AGG 0.651820 6.3:-19872824 None:intergenic
ACTTGGTCATCTCCATCGCA+GGG 0.651995 6.3:-19870977 None:intergenic
TCAGACCCCTGAATTGAGGA+GGG 0.652012 6.3:+19872863 MS.gene49811:CDS
AGAGCAACAAGTATGATACT+GGG 0.654520 6.3:-19871565 None:intergenic
GGTGCTCAATACCACCGCCA+TGG 0.656443 6.3:+19870866 MS.gene49811:CDS
TCTTATCCCAGAATGACTCG+AGG 0.662869 6.3:-19870725 None:intergenic
AGCCATAGATGACCAGAAGA+CGG 0.665553 6.3:-19873366 None:intergenic
CCTAGATACGGATGGACCGG+CGG 0.669924 6.3:+19870903 MS.gene49811:CDS
ATCAGAACGAGAATTCTCGA+TGG 0.673807 6.3:-19874162 None:intergenic
CCGGTCCATCCGTATCTAGG+TGG 0.674688 6.3:-19870900 None:intergenic
TGGTGTGCAGGATACTACTC+AGG 0.675205 6.3:+19873760 MS.gene49811:CDS
TGAAGTGAGAGTAGCACATG+TGG 0.675505 6.3:-19874094 None:intergenic
TGAATACAAGGAAGCCAAGG+CGG 0.690512 6.3:+19871193 MS.gene49811:CDS
TAACAAGATCAACAGCAGTG+TGG 0.698988 6.3:-19872297 None:intergenic
GGATAAGAAGAGCAGCGCCG+AGG 0.705022 6.3:+19870740 MS.gene49811:CDS
CTGCGATGGAGATGACCAAG+TGG 0.718801 6.3:+19870979 MS.gene49811:CDS
CCACTGAAGAAATTGCTGAG+AGG 0.727912 6.3:+19874276 MS.gene49811:CDS
GAAGTGAGAGTAGCACATGT+GGG 0.737320 6.3:-19874093 None:intergenic
CTCTCCAAGAGTGACCAACG+AGG 0.739076 6.3:+19872618 MS.gene49811:CDS
AGTGAATGTCATAAACTCCG+GGG 0.741156 6.3:-19874238 None:intergenic
GTTTCCAGATAGATGCCCTG+AGG 0.749748 6.3:-19870785 None:intergenic
AGTATGATACTGGGCCAACG+AGG 0.751919 6.3:-19871556 None:intergenic
TGGAACAGCACCGACCATGG+CGG 0.754785 6.3:-19870880 None:intergenic
TGACACCAGTAAGACCTGTG+AGG 0.774145 6.3:-19871939 None:intergenic
CAAAACTCGCAAGTACACCG+AGG 0.785977 6.3:+19874361 MS.gene49811:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAAATTTAATATTCA+GGG - chr6.3:19871510-19871529 None:intergenic 10.0%
!!! AAATTTTATCTTAGTTATTA+TGG + chr6.3:19872467-19872486 MS.gene49811:intron 10.0%
!!! AATTTTATCTTAGTTATTAT+GGG + chr6.3:19872468-19872487 MS.gene49811:intron 10.0%
!! CGATTATTATTATTAATTCA+GGG + chr6.3:19871723-19871742 MS.gene49811:intron 15.0%
!! GAAAGAAAAATTTAATATTC+AGG - chr6.3:19871511-19871530 None:intergenic 15.0%
!! TCGATTATTATTATTAATTC+AGG + chr6.3:19871722-19871741 MS.gene49811:intron 15.0%
!! TTAATAATAATAATCGAGTT+AGG - chr6.3:19871719-19871738 None:intergenic 15.0%
!! TTTGTAATACAAAACATTAT+CGG + chr6.3:19873950-19873969 MS.gene49811:intron 15.0%
!! AGCTACTGTTATAAATAATT+TGG - chr6.3:19872534-19872553 None:intergenic 20.0%
!! GTTAATTAACTTACATATCT+TGG + chr6.3:19874045-19874064 MS.gene49811:intron 20.0%
!! GTTATAAATAATTTGGAAGA+TGG - chr6.3:19872527-19872546 None:intergenic 20.0%
!!! ATTAAATTTTTCTTTCAGCT+TGG + chr6.3:19871515-19871534 MS.gene49811:intron 20.0%
!!! CTTTATTGTTATTTCTAACA+TGG + chr6.3:19873539-19873558 MS.gene49811:intron 20.0%
!!! TGGATAAAAGTATTTTATTG+TGG - chr6.3:19872507-19872526 None:intergenic 20.0%
!!! TTAGTTCTCATATTCATTTA+CGG + chr6.3:19873105-19873124 MS.gene49811:intron 20.0%
! AAAAATAATCAAGAAAGCCA+AGG - chr6.3:19872940-19872959 None:intergenic 25.0%
! AACATTTAAACCAGATAAAG+CGG - chr6.3:19871872-19871891 None:intergenic 25.0%
! AACTTCATCATACATAAGAA+GGG - chr6.3:19873987-19874006 None:intergenic 25.0%
! AATTTGGATAACAGTAATAC+CGG - chr6.3:19873645-19873664 None:intergenic 25.0%
! GAAAAGTGAAAACAATTAGT+TGG - chr6.3:19873200-19873219 None:intergenic 25.0%
! TAACTTCATCATACATAAGA+AGG - chr6.3:19873988-19874007 None:intergenic 25.0%
! TGGATAATGAGATTAAATCA+TGG + chr6.3:19872332-19872351 MS.gene49811:CDS 25.0%
!! ATGTTTTGTATTACAAAGCT+TGG - chr6.3:19873947-19873966 None:intergenic 25.0%
!! TTTATAACAGTAGCTTTTTG+TGG + chr6.3:19872539-19872558 MS.gene49811:intron 25.0%
!!! AAGACTGTTGATTTGATTAA+GGG + chr6.3:19871994-19872013 MS.gene49811:CDS 25.0%
!!! GTTTTGTTTGATGTATAAGA+AGG - chr6.3:19872438-19872457 None:intergenic 25.0%
!!! TAAGACTGTTGATTTGATTA+AGG + chr6.3:19871993-19872012 MS.gene49811:CDS 25.0%
!!! TCTAATCTTGTTTCTTTTAC+AGG + chr6.3:19872976-19872995 MS.gene49811:intron 25.0%
!!! TTGCGTAAATTTCATTTTTC+AGG + chr6.3:19871422-19871441 MS.gene49811:intron 25.0%
AATGATATGGTTGAGTACTT+TGG + chr6.3:19873230-19873249 MS.gene49811:CDS 30.0%
AGTGACAATATTATGCTGTT+TGG - chr6.3:19872212-19872231 None:intergenic 30.0%
ATTATAACCACAGAACCATA+AGG - chr6.3:19871066-19871085 None:intergenic 30.0%
CGTGTATTATGAAACGATAA+TGG - chr6.3:19871336-19871355 None:intergenic 30.0%
CTATGTTAAGTCAATGAAAG+AGG + chr6.3:19873013-19873032 MS.gene49811:CDS 30.0%
GGACAAACGATTTAATTAAG+TGG - chr6.3:19872191-19872210 None:intergenic 30.0%
TACTGTTATCCAAATTGATG+AGG + chr6.3:19873649-19873668 MS.gene49811:CDS 30.0%
TCTTCTCTGACTACATTAAA+CGG + chr6.3:19872090-19872109 MS.gene49811:CDS 30.0%
TGCGTTAATTTCTTCTTACT+TGG + chr6.3:19871234-19871253 MS.gene49811:intron 30.0%
TGGTATTTGTTTGTTCCTTA+TGG + chr6.3:19871048-19871067 MS.gene49811:intron 30.0%
TTAGTAAATGACAACACTGA+TGG + chr6.3:19871358-19871377 MS.gene49811:intron 30.0%
TTATTAATTCAGGGAAGTTG+TGG + chr6.3:19871732-19871751 MS.gene49811:intron 30.0%
TTCATTGCAGAGAAATGATA+TGG + chr6.3:19873217-19873236 MS.gene49811:intron 30.0%
TTTAATCTCATTATCCAGCT+TGG - chr6.3:19872329-19872348 None:intergenic 30.0%
! ACATATTTTCTTTCCCTCAT+AGG + chr6.3:19872722-19872741 MS.gene49811:intron 30.0%
! CAATTAGTTGGAAGTACAAT+CGG - chr6.3:19873188-19873207 None:intergenic 30.0%
! GTTTACTTCAACGACTTTTT+GGG - chr6.3:19872371-19872390 None:intergenic 30.0%
! TGTATACTGCAATGACTTTT+GGG - chr6.3:19871640-19871659 None:intergenic 30.0%
! TTGTATACTGCAATGACTTT+TGG - chr6.3:19871641-19871660 None:intergenic 30.0%
AACAAAGGACCAATTGAGAA+TGG - chr6.3:19873441-19873460 None:intergenic 35.0%
AGAGCAACAAGTATGATACT+GGG - chr6.3:19871568-19871587 None:intergenic 35.0%
AGAGTAAGAAGATCAAAGGA+TGG - chr6.3:19871614-19871633 None:intergenic 35.0%
AGCCATCATTACTTACTAGT+TGG - chr6.3:19871012-19871031 None:intergenic 35.0%
ATTTGATACCTACTTCTCCA+TGG + chr6.3:19870935-19870954 MS.gene49811:CDS 35.0%
CACCAACTAGTAAGTAATGA+TGG + chr6.3:19871007-19871026 MS.gene49811:intron 35.0%
CACTGACAGTATCTAAACTA+AGG - chr6.3:19871263-19871282 None:intergenic 35.0%
CGTAGAATTTATACCTAGGT+TGG - chr6.3:19873472-19873491 None:intergenic 35.0%
CTTCTCTGACTACATTAAAC+GGG + chr6.3:19872091-19872110 MS.gene49811:CDS 35.0%
GAGTCGTAGAATTTATACCT+AGG - chr6.3:19873476-19873495 None:intergenic 35.0%
GCATAAGTGAATTTCACATC+AGG - chr6.3:19871155-19871174 None:intergenic 35.0%
TGAATATGAGAACTAACCTC+AGG - chr6.3:19873101-19873120 None:intergenic 35.0%
TGTATTACAAAGCTTGGACA+CGG - chr6.3:19873941-19873960 None:intergenic 35.0%
TTCTACGACTCATCTTAATG+TGG + chr6.3:19873485-19873504 MS.gene49811:intron 35.0%
TTCTGATGAAAAGCTCCTAA+GGG + chr6.3:19874178-19874197 MS.gene49811:CDS 35.0%
! CATCGATATCAAGCTTTTCT+TGG - chr6.3:19873061-19873080 None:intergenic 35.0%
! CGTTTACTTCAACGACTTTT+TGG - chr6.3:19872372-19872391 None:intergenic 35.0%
! CTTTTTGTGGTTTCATTTGC+AGG + chr6.3:19872552-19872571 MS.gene49811:intron 35.0%
! GCTTGAGAAAAACGTTTTGT+GGG + chr6.3:19874319-19874338 MS.gene49811:CDS 35.0%
! TGCTTGAGAAAAACGTTTTG+TGG + chr6.3:19874318-19874337 MS.gene49811:CDS 35.0%
! TTTCTTTTACAGGATCTCAG+AGG + chr6.3:19872986-19873005 MS.gene49811:intron 35.0%
!! ACTGTTGATTTGATTAAGGG+TGG + chr6.3:19871997-19872016 MS.gene49811:CDS 35.0%
!! AGTTGATGGAAGGAACATTT+GGG + chr6.3:19872053-19872072 MS.gene49811:CDS 35.0%
!! GGCTCATGTTTTTGTTGTAT+TGG + chr6.3:19871028-19871047 MS.gene49811:intron 35.0%
!! TAGTTGATGGAAGGAACATT+TGG + chr6.3:19872052-19872071 MS.gene49811:CDS 35.0%
AAATTGAATCCATGAAGCCC+CGG - chr6.3:19871773-19871792 None:intergenic 40.0%
AATCAACAGTCTTAGCTCCA+CGG - chr6.3:19871987-19872006 None:intergenic 40.0%
AATGGATGGGTGCAATCTTA+TGG + chr6.3:19873284-19873303 MS.gene49811:CDS 40.0%
ACATCACCATAGATGATTGG+TGG - chr6.3:19873326-19873345 None:intergenic 40.0%
ACCAAGTAAGATATGCTGCT+GGG + chr6.3:19872906-19872925 MS.gene49811:intron 40.0%
ACCAATTGAGAATGGTGACA+GGG - chr6.3:19873433-19873452 None:intergenic 40.0%
ACGACTCATCTTAATGTGGT+CGG + chr6.3:19873489-19873508 MS.gene49811:intron 40.0%
ACTTTAAATGCTTACCGCCT+TGG - chr6.3:19871210-19871229 None:intergenic 40.0%
AGCAATCTGATAGCAAGTCT+CGG - chr6.3:19873585-19873604 None:intergenic 40.0%
AGTCGTTGAAGTAAACGCAT+TGG + chr6.3:19872375-19872394 MS.gene49811:CDS 40.0%
AGTGAATGTCATAAACTCCG+GGG - chr6.3:19874241-19874260 None:intergenic 40.0%
AGTGGAAAATACTTGTTCGC+TGG + chr6.3:19872027-19872046 MS.gene49811:CDS 40.0%
AGTTAAGCTGTGACTGTGAA+AGG + chr6.3:19871383-19871402 MS.gene49811:intron 40.0%
ATCAGAACGAGAATTCTCGA+TGG - chr6.3:19874165-19874184 None:intergenic 40.0%
ATCTGAACAAGCTCACTACT+TGG + chr6.3:19873703-19873722 MS.gene49811:CDS 40.0%
ATTCACTTATGCCTCTCACA+AGG + chr6.3:19871163-19871182 MS.gene49811:CDS 40.0%
ATTGTTGGATATCCTCGCAT+GGG + chr6.3:19870678-19870697 MS.gene49811:CDS 40.0%
CAAGGCTGTGAATGAATACA+AGG + chr6.3:19871181-19871200 MS.gene49811:CDS 40.0%
CACTTTCGCATACTATGATC+AGG + chr6.3:19870845-19870864 MS.gene49811:CDS 40.0%
CAGTAAGCATTCCCTTCATT+GGG - chr6.3:19873409-19873428 None:intergenic 40.0%
CATCCACTCAATCATTGACA+TGG + chr6.3:19874124-19874143 MS.gene49811:CDS 40.0%
CATCCATGTCAATGATTGAG+TGG - chr6.3:19874130-19874149 None:intergenic 40.0%
CTCACATCACCATAGATGAT+TGG - chr6.3:19873329-19873348 None:intergenic 40.0%
CTCTCAGCAATTTCTTCAGT+GGG - chr6.3:19874278-19874297 None:intergenic 40.0%
CTGTCAGTGTTGTCAAATAG+CGG + chr6.3:19871274-19871293 MS.gene49811:intron 40.0%
GAATGAATACAAGGAAGCCA+AGG + chr6.3:19871190-19871209 MS.gene49811:CDS 40.0%
GAGAGCAACAAGTATGATAC+TGG - chr6.3:19871569-19871588 None:intergenic 40.0%
GAGGAGAGTAAGAAGATCAA+AGG - chr6.3:19871618-19871637 None:intergenic 40.0%
GAGTGAATGTCATAAACTCC+GGG - chr6.3:19874242-19874261 None:intergenic 40.0%
GATATCGATGTCCTTGTACA+CGG + chr6.3:19873071-19873090 MS.gene49811:CDS 40.0%
GCAGTAAATGCGTTCAACTT+GGG - chr6.3:19871829-19871848 None:intergenic 40.0%
GCTTGTTCAGATTTCCTCAA+TGG - chr6.3:19873695-19873714 None:intergenic 40.0%
GGAGTGAATGTCATAAACTC+CGG - chr6.3:19874243-19874262 None:intergenic 40.0%
GTAGAAGACCTTGAAAAAGC+CGG + chr6.3:19873623-19873642 MS.gene49811:CDS 40.0%
GTTCTGATGAAAAGCTCCTA+AGG + chr6.3:19874177-19874196 MS.gene49811:CDS 40.0%
TAACAAGATCAACAGCAGTG+TGG - chr6.3:19872300-19872319 None:intergenic 40.0%
TAATCGACGACATCTGAATG+AGG - chr6.3:19873165-19873184 None:intergenic 40.0%
TACCAAGTAAGATATGCTGC+TGG + chr6.3:19872905-19872924 MS.gene49811:intron 40.0%
TACTTTGGTGAGCAGTTATC+AGG + chr6.3:19873245-19873264 MS.gene49811:CDS 40.0%
TCAAAGCAGCCTCATCAATT+TGG - chr6.3:19873661-19873680 None:intergenic 40.0%
TCAGATTGCTTTGGCTATCA+AGG + chr6.3:19873595-19873614 MS.gene49811:CDS 40.0%
TCTTTCAGGATCACCAATGT+TGG + chr6.3:19873740-19873759 MS.gene49811:CDS 40.0%
TGCAGTAAATGCGTTCAACT+TGG - chr6.3:19871830-19871849 None:intergenic 40.0%
TTGCCTTCACTGTTAATGGA+TGG + chr6.3:19873270-19873289 MS.gene49811:CDS 40.0%
TTGTTCGTAATGACCAACCT+AGG + chr6.3:19873456-19873475 MS.gene49811:CDS 40.0%
TTTCACATCAGGTCCCAATT+CGG - chr6.3:19871144-19871163 None:intergenic 40.0%
! AGGTTGGTCATTACGAACAA+AGG - chr6.3:19873456-19873475 None:intergenic 40.0%
! ATACTGCAATGACTTTTGGG+AGG - chr6.3:19871637-19871656 None:intergenic 40.0%
! ATGCCAATGATCTGAAGTGT+CGG - chr6.3:19873812-19873831 None:intergenic 40.0%
! ATTAAGGGTGGATTTCCTAG+TGG + chr6.3:19872009-19872028 MS.gene49811:CDS 40.0%
! CATTGGTGATCCTGAAAGAA+TGG - chr6.3:19873739-19873758 None:intergenic 40.0%
! GCGAACAAGTATTTTCCACT+AGG - chr6.3:19872027-19872046 None:intergenic 40.0%
! GGTTGATTACCTCATCCTTT+TGG - chr6.3:19872417-19872436 None:intergenic 40.0%
! GTTTGTTCCTTATGGTTCTG+TGG + chr6.3:19871056-19871075 MS.gene49811:intron 40.0%
! TCAAGGTCTAAGACAAGTGT+AGG - chr6.3:19871802-19871821 None:intergenic 40.0%
! TGCCTTCACTGTTAATGGAT+GGG + chr6.3:19873271-19873290 MS.gene49811:CDS 40.0%
! TTCAGGACAAGTTCTGATGT+TGG + chr6.3:19871439-19871458 MS.gene49811:intron 40.0%
! TTCCGTGATGGAGTTAAGTA+TGG + chr6.3:19874203-19874222 MS.gene49811:CDS 40.0%
! TTCGGATTTGATTTAGTCCG+TGG + chr6.3:19871967-19871986 MS.gene49811:CDS 40.0%
!! AGTATGCGAAAGTGTTGCTA+GGG - chr6.3:19870839-19870858 None:intergenic 40.0%
!! GACTTGCTATCAGATTGCTT+TGG + chr6.3:19873586-19873605 MS.gene49811:CDS 40.0%
!! TAGTATGCGAAAGTGTTGCT+AGG - chr6.3:19870840-19870859 None:intergenic 40.0%
!!! CAGTAATACCGGCTTTTTCA+AGG - chr6.3:19873634-19873653 None:intergenic 40.0%
AACAAGCTCACTACTTGGAC+TGG + chr6.3:19873708-19873727 MS.gene49811:CDS 45.0%
AAGATCCTCACAGGTCTTAC+TGG + chr6.3:19871934-19871953 MS.gene49811:CDS 45.0%
ACAAGCTCACTACTTGGACT+GGG + chr6.3:19873709-19873728 MS.gene49811:CDS 45.0%
AGCCATAGATGACCAGAAGA+CGG - chr6.3:19873369-19873388 None:intergenic 45.0%
AGTATCCTGCACACCAACAT+TGG - chr6.3:19873756-19873775 None:intergenic 45.0%
ATCAAATCCAATCTCACCGC+CGG - chr6.3:19870922-19870941 None:intergenic 45.0%
ATGACCAAACGCCCAATGAA+GGG + chr6.3:19873395-19873414 MS.gene49811:CDS 45.0%
CACCCATCCATTAACAGTGA+AGG - chr6.3:19873276-19873295 None:intergenic 45.0%
CACTACATTGTCCCCGAATT+GGG + chr6.3:19871128-19871147 MS.gene49811:CDS 45.0%
CATTGTTGGATATCCTCGCA+TGG + chr6.3:19870677-19870696 MS.gene49811:CDS 45.0%
CCAATGAAGGGAATGCTTAC+TGG + chr6.3:19873407-19873426 MS.gene49811:CDS 45.0%
CCACTGAAGAAATTGCTGAG+AGG + chr6.3:19874276-19874295 MS.gene49811:CDS 45.0%
CCAGTAAGCATTCCCTTCAT+TGG - chr6.3:19873410-19873429 None:intergenic 45.0%
CCTCTCAGCAATTTCTTCAG+TGG - chr6.3:19874279-19874298 None:intergenic 45.0%
CGCCATACTTAACTCCATCA+CGG - chr6.3:19874208-19874227 None:intergenic 45.0%
CGTTCAACTTGGGTGATTCA+AGG - chr6.3:19871819-19871838 None:intergenic 45.0%
CTGAATGAGGCACAGGAAAT+TGG - chr6.3:19873152-19873171 None:intergenic 45.0%
CTTATCCCAGAATGACTCGA+GGG - chr6.3:19870727-19870746 None:intergenic 45.0%
CTTCAGTGGGTGGTATTCTT+GGG - chr6.3:19874265-19874284 None:intergenic 45.0%
GAACGCAACTTCATGTGTGT+CGG - chr6.3:19873867-19873886 None:intergenic 45.0%
GAAGTGAGAGTAGCACATGT+GGG - chr6.3:19874096-19874115 None:intergenic 45.0%
GACCAATTGAGAATGGTGAC+AGG - chr6.3:19873434-19873453 None:intergenic 45.0%
GATCTTGCTTCCGCTTTATC+TGG + chr6.3:19871859-19871878 MS.gene49811:CDS 45.0%
GCTAGGGATATACTTGATCC+CGG - chr6.3:19870823-19870842 None:intergenic 45.0%
GGAAGTTGTGGCTGATCTTA+AGG + chr6.3:19871744-19871763 MS.gene49811:CDS 45.0%
GGCTTTGCCTTCACTGTTAA+TGG + chr6.3:19873266-19873285 MS.gene49811:CDS 45.0%
GTGAAGCCACCAATCATCTA+TGG + chr6.3:19873317-19873336 MS.gene49811:CDS 45.0%
TCAGCAATTTCTTCAGTGGG+TGG - chr6.3:19874275-19874294 None:intergenic 45.0%
TCATAGGCTGCTGCATTGAA+GGG + chr6.3:19872738-19872757 MS.gene49811:intron 45.0%
TCCCAGCAGCATATCTTACT+TGG - chr6.3:19872910-19872929 None:intergenic 45.0%
TCTGACTACATTAAACGGGC+TGG + chr6.3:19872095-19872114 MS.gene49811:CDS 45.0%
TCTTATCCCAGAATGACTCG+AGG - chr6.3:19870728-19870747 None:intergenic 45.0%
TCTTCAGTGGGTGGTATTCT+TGG - chr6.3:19874266-19874285 None:intergenic 45.0%
TCTTGTTAACGAGACCAAGC+TGG + chr6.3:19872312-19872331 MS.gene49811:CDS 45.0%
TGAAGTGAGAGTAGCACATG+TGG - chr6.3:19874097-19874116 None:intergenic 45.0%
TGAATACAAGGAAGCCAAGG+CGG + chr6.3:19871193-19871212 MS.gene49811:CDS 45.0%
TGCAGCGTTAGAAGAGAAGA+AGG - chr6.3:19872578-19872597 None:intergenic 45.0%
TTCAATGCAGCAGCCTATGA+GGG - chr6.3:19872738-19872757 None:intergenic 45.0%
TTCACATCAGGTCCCAATTC+GGG - chr6.3:19871143-19871162 None:intergenic 45.0%
TTCAGTGGGTGGTATTCTTG+GGG - chr6.3:19874264-19874283 None:intergenic 45.0%
TTGTTCGCTGGAGTAGTTGA+TGG + chr6.3:19872039-19872058 MS.gene49811:CDS 45.0%
! GTTAAGTATGGCGCTGGAAT+TGG + chr6.3:19874215-19874234 MS.gene49811:CDS 45.0%
! TGAAGTAAACGCATTGGCCA+AGG + chr6.3:19872381-19872400 MS.gene49811:CDS 45.0%
! TTCATTCACAGCCTTGTGAG+AGG - chr6.3:19871177-19871196 None:intergenic 45.0%
!! ACTACATTAAACGGGCTGGA+AGG + chr6.3:19872099-19872118 MS.gene49811:CDS 45.0%
!! ATGAGGCTGCTTTGAGAGAA+GGG + chr6.3:19873666-19873685 MS.gene49811:CDS 45.0%
!! CTTACTGGTGTCACAGCATT+CGG + chr6.3:19871949-19871968 MS.gene49811:CDS 45.0%
!!! CGAGTTTTGAGACCACAATC+GGG - chr6.3:19874350-19874369 None:intergenic 45.0%
!!! GCGAGTTTTGAGACCACAAT+CGG - chr6.3:19874351-19874370 None:intergenic 45.0%
AAGGATCCAATGGTCGTGGT+TGG - chr6.3:19872840-19872859 None:intergenic 50.0%
ACGACATCTGAATGAGGCAC+AGG - chr6.3:19873159-19873178 None:intergenic 50.0%
ACTGGGCTGTCCATTCTTTC+AGG + chr6.3:19873726-19873745 MS.gene49811:CDS 50.0%
ACTTGGTCATCTCCATCGCA+GGG - chr6.3:19870980-19870999 None:intergenic 50.0%
AGACGGTCATTGCCTTAGGA+CGG - chr6.3:19873352-19873371 None:intergenic 50.0%
AGCAGGAATGTCGGCAAAGT+AGG - chr6.3:19871905-19871924 None:intergenic 50.0%
AGCCACCTTCTCCAAATCCT+CGG - chr6.3:19870760-19870779 None:intergenic 50.0%
AGGATCTTGTATGCCTCAGC+AGG - chr6.3:19871922-19871941 None:intergenic 50.0%
AGTATGATACTGGGCCAACG+AGG - chr6.3:19871559-19871578 None:intergenic 50.0%
AGTGTGGAGAAGTGAGCAAG+AGG - chr6.3:19872284-19872303 None:intergenic 50.0%
ATCAACACCGTTAGCAGGCT+TGG - chr6.3:19871591-19871610 None:intergenic 50.0%
ATCCAATGGTCGTGGTTGGA+AGG - chr6.3:19872836-19872855 None:intergenic 50.0%
CAAAACTCGCAAGTACACCG+AGG + chr6.3:19874361-19874380 MS.gene49811:CDS 50.0%
CACAAATGTCAGCGCTAGAC+TGG + chr6.3:19872779-19872798 MS.gene49811:CDS 50.0%
CAGAAGACGGTCATTGCCTT+AGG - chr6.3:19873356-19873375 None:intergenic 50.0%
CATGACCAAACGCCCAATGA+AGG + chr6.3:19873394-19873413 MS.gene49811:CDS 50.0%
CATTCCCTTCATTGGGCGTT+TGG - chr6.3:19873402-19873421 None:intergenic 50.0%
CCAATTCGGGGACAATGTAG+TGG - chr6.3:19871130-19871149 None:intergenic 50.0%
CCACTACATTGTCCCCGAAT+TGG + chr6.3:19871127-19871146 MS.gene49811:CDS 50.0%
CGAACTTGAGCTCTCTCTTG+GGG - chr6.3:19870704-19870723 None:intergenic 50.0%
CTAAGGCAATGACCGTCTTC+TGG + chr6.3:19873354-19873373 MS.gene49811:CDS 50.0%
CTCATAGGCTGCTGCATTGA+AGG + chr6.3:19872737-19872756 MS.gene49811:intron 50.0%
CTGTTCCACCTAGATACGGA+TGG + chr6.3:19870895-19870914 MS.gene49811:CDS 50.0%
CTTCAATGCAGCAGCCTATG+AGG - chr6.3:19872739-19872758 None:intergenic 50.0%
CTTGGAGCTCAACGACTTGA+CGG - chr6.3:19873043-19873062 None:intergenic 50.0%
GACACAATTCCAGTCCTCGT+TGG + chr6.3:19871542-19871561 MS.gene49811:CDS 50.0%
GACCGTCTTCTGGTCATCTA+TGG + chr6.3:19873364-19873383 MS.gene49811:CDS 50.0%
GAGGCACAGGAAATTGGACA+AGG - chr6.3:19873146-19873165 None:intergenic 50.0%
GAGGCATACAAGATCCTCAC+AGG + chr6.3:19871925-19871944 MS.gene49811:CDS 50.0%
GATATACTTGATCCCGGCAC+TGG - chr6.3:19870817-19870836 None:intergenic 50.0%
GATCACCAATGTTGGTGTGC+AGG + chr6.3:19873748-19873767 MS.gene49811:CDS 50.0%
GATGGAGTTAAGTATGGCGC+TGG + chr6.3:19874209-19874228 MS.gene49811:CDS 50.0%
GATGGATCAACACCGTTAGC+AGG - chr6.3:19871596-19871615 None:intergenic 50.0%
GCCCTGTCACCATTCTCAAT+TGG + chr6.3:19873429-19873448 MS.gene49811:CDS 50.0%
GCGAACTTGAGCTCTCTCTT+GGG - chr6.3:19870705-19870724 None:intergenic 50.0%
GTATGCCTCAGCAGGAATGT+CGG - chr6.3:19871914-19871933 None:intergenic 50.0%
GTTTCCAGATAGATGCCCTG+AGG - chr6.3:19870788-19870807 None:intergenic 50.0%
TCACATCAGGTCCCAATTCG+GGG - chr6.3:19871142-19871161 None:intergenic 50.0%
TCAGACCCCTGAATTGAGGA+GGG + chr6.3:19872863-19872882 MS.gene49811:CDS 50.0%
TCCTCAATTCAGGGGTCTGA+GGG - chr6.3:19872863-19872882 None:intergenic 50.0%
TGACACCAGTAAGACCTGTG+AGG - chr6.3:19871942-19871961 None:intergenic 50.0%
TGACATTTGTGGCACGACGA+TGG - chr6.3:19872770-19872789 None:intergenic 50.0%
TGAGAGAAGGGTTGCCATTG+AGG + chr6.3:19873678-19873697 MS.gene49811:CDS 50.0%
TGGAAACAGATGTCCAGTGC+CGG + chr6.3:19870801-19870820 MS.gene49811:CDS 50.0%
TGGTGTGCAGGATACTACTC+AGG + chr6.3:19873760-19873779 MS.gene49811:CDS 50.0%
TTCCACTTGCAAGCTGGTTG+CGG - chr6.3:19874430-19874449 None:intergenic 50.0%
TTGCTCTCCAAGCCTGCTAA+CGG + chr6.3:19871581-19871600 MS.gene49811:CDS 50.0%
TTGTGGGTCAATCCCGATTG+TGG + chr6.3:19874335-19874354 MS.gene49811:CDS 50.0%
! AAACGCATTGGCCAAGGCAT+TGG + chr6.3:19872387-19872406 MS.gene49811:CDS 50.0%
! ATTGGCTGGCCAAAAGGATG+AGG + chr6.3:19872405-19872424 MS.gene49811:CDS 50.0%
! GCACCGACACTTCAGATCAT+TGG + chr6.3:19873806-19873825 MS.gene49811:intron 50.0%
!! CAGTCTAGCGCTGACATTTG+TGG - chr6.3:19872781-19872800 None:intergenic 50.0%
!! CTAGTTGGTGTCGAACCACT+TGG - chr6.3:19870997-19871016 None:intergenic 50.0%
!! GATGAGGCTGCTTTGAGAGA+AGG + chr6.3:19873665-19873684 MS.gene49811:CDS 50.0%
!! GGTGCTGTTCCACCTAGATA+CGG + chr6.3:19870891-19870910 MS.gene49811:CDS 50.0%
!! TCGCTGGAGTAGTTGATGGA+AGG + chr6.3:19872043-19872062 MS.gene49811:CDS 50.0%
ACAGCCTCGTTGGTCACTCT+TGG - chr6.3:19872625-19872644 None:intergenic 55.0%
ACCTACTTCTCCATGGCCAG+AGG + chr6.3:19870942-19870961 MS.gene49811:CDS 55.0%
ACCTCTGGCCATGGAGAAGT+AGG - chr6.3:19870946-19870965 None:intergenic 55.0%
AGCCTTCTGAACAGCCTCGT+TGG - chr6.3:19872635-19872654 None:intergenic 55.0%
AGGGAAGGATCCAATGGTCG+TGG - chr6.3:19872844-19872863 None:intergenic 55.0%
AGTTCGCCCTCGAGTCATTC+TGG + chr6.3:19870718-19870737 MS.gene49811:CDS 55.0%
ATCCGCAACCAGCTTGCAAG+TGG + chr6.3:19874425-19874444 MS.gene49811:CDS 55.0%
ATGGTCGTGGTTGGAAGGAC+AGG - chr6.3:19872831-19872850 None:intergenic 55.0%
CAATTCAGGGGTCTGAGGGA+AGG - chr6.3:19872859-19872878 None:intergenic 55.0%
CACTTGGTCATCTCCATCGC+AGG - chr6.3:19870981-19871000 None:intergenic 55.0%
CCACCTAGATACGGATGGAC+CGG + chr6.3:19870900-19870919 MS.gene49811:CDS 55.0%
CTCAATACCACCGCCATGGT+CGG + chr6.3:19870870-19870889 MS.gene49811:CDS 55.0%
CTCAGACCCCTGAATTGAGG+AGG + chr6.3:19872862-19872881 MS.gene49811:CDS 55.0%
CTCCATCACGGAACACCCTT+AGG - chr6.3:19874196-19874215 None:intergenic 55.0%
CTCCTCAATTCAGGGGTCTG+AGG - chr6.3:19872864-19872883 None:intergenic 55.0%
CTCGTTGGTCACTCTTGGAG+AGG - chr6.3:19872620-19872639 None:intergenic 55.0%
CTCTCCAAGAGTGACCAACG+AGG + chr6.3:19872618-19872637 MS.gene49811:CDS 55.0%
CTCTTCTAACGCTGCAGCTC+TGG + chr6.3:19872582-19872601 MS.gene49811:CDS 55.0%
CTGCGATGGAGATGACCAAG+TGG + chr6.3:19870979-19870998 MS.gene49811:CDS 55.0%
CTTTGCCGACATTCCTGCTG+AGG + chr6.3:19871906-19871925 MS.gene49811:CDS 55.0%
GACCAACGAGGCTGTTCAGA+AGG + chr6.3:19872630-19872649 MS.gene49811:CDS 55.0%
GAGAGTAGCACATGTGGGTG+TGG - chr6.3:19874091-19874110 None:intergenic 55.0%
GGAAACAGATGTCCAGTGCC+GGG + chr6.3:19870802-19870821 MS.gene49811:CDS 55.0%
GGCGAACTTGAGCTCTCTCT+TGG - chr6.3:19870706-19870725 None:intergenic 55.0%
GGTCTGAGGGAAGGATCCAA+TGG - chr6.3:19872850-19872869 None:intergenic 55.0%
GTCCTTCCAACCACGACCAT+TGG + chr6.3:19872831-19872850 MS.gene49811:CDS 55.0%
GTCGCACCCTCCTCAATTCA+GGG - chr6.3:19872872-19872891 None:intergenic 55.0%
GTGGCTGATCTTAAGGCAGC+CGG + chr6.3:19871751-19871770 MS.gene49811:CDS 55.0%
GTTCGCCCTCGAGTCATTCT+GGG + chr6.3:19870719-19870738 MS.gene49811:CDS 55.0%
TCCCTCAGACCCCTGAATTG+AGG + chr6.3:19872859-19872878 MS.gene49811:CDS 55.0%
TCGCACCCTCCTCAATTCAG+GGG - chr6.3:19872871-19872890 None:intergenic 55.0%
TCGTGGTTGGAAGGACAGGA+AGG - chr6.3:19872827-19872846 None:intergenic 55.0%
TGGCTGATCTTAAGGCAGCC+GGG + chr6.3:19871752-19871771 MS.gene49811:CDS 55.0%
! CTGACCTCAGGGCATCTATC+TGG + chr6.3:19870781-19870800 MS.gene49811:CDS 55.0%
! CTGGTTGCGGATGCGTTTTG+TGG - chr6.3:19874417-19874436 None:intergenic 55.0%
! CTTTTGGCCAGCCAATGCCT+TGG - chr6.3:19872401-19872420 None:intergenic 55.0%
! GAGGGTGCGACGTGAATACA+AGG + chr6.3:19872881-19872900 MS.gene49811:CDS 55.0%
! GCGTTTTGTGGCCTCAACCA+TGG - chr6.3:19874405-19874424 None:intergenic 55.0%
! TGGTGATGTGAGCCGTCCTA+AGG + chr6.3:19873337-19873356 MS.gene49811:CDS 55.0%
!! CAAGGCATTGGCTGGCCAAA+AGG + chr6.3:19872399-19872418 MS.gene49811:CDS 55.0%
!! CTCCTAAGGGTGTTCCGTGA+TGG + chr6.3:19874191-19874210 MS.gene49811:CDS 55.0%
ACACCAGACACGACGCTGAC+GGG - chr6.3:19873918-19873937 None:intergenic 60.0%
AGAAGGTGGCTGCTGACCTC+AGG + chr6.3:19870769-19870788 MS.gene49811:CDS 60.0%
AGCCCTCACTGCCATGGTTG+AGG + chr6.3:19874391-19874410 MS.gene49811:CDS 60.0%
AGTGAGGGCTGGGTTCACCT+CGG - chr6.3:19874381-19874400 None:intergenic 60.0%
CAACCATGGCAGTGAGGGCT+GGG - chr6.3:19874391-19874410 None:intergenic 60.0%
CCGGTCCATCCGTATCTAGG+TGG - chr6.3:19870903-19870922 None:intergenic 60.0%
CCTAGATACGGATGGACCGG+CGG + chr6.3:19870903-19870922 MS.gene49811:CDS 60.0%
CCTCAGGCTCTCCGTGTACA+AGG - chr6.3:19873085-19873104 None:intergenic 60.0%
CCTTGTACACGGAGAGCCTG+AGG + chr6.3:19873082-19873101 MS.gene49811:CDS 60.0%
CGCCGAGGATTTGGAGAAGG+TGG + chr6.3:19870755-19870774 MS.gene49811:CDS 60.0%
CGTCGCACCCTCCTCAATTC+AGG - chr6.3:19872873-19872892 None:intergenic 60.0%
GAAGGTGGCTGCTGACCTCA+GGG + chr6.3:19870770-19870789 MS.gene49811:CDS 60.0%
GACACCAGACACGACGCTGA+CGG - chr6.3:19873919-19873938 None:intergenic 60.0%
GATACTGGGCCAACGAGGAC+TGG - chr6.3:19871554-19871573 None:intergenic 60.0%
GCTGCTGGGAGCTGATACCT+TGG + chr6.3:19872920-19872939 MS.gene49811:intron 60.0%
GGATAAGAAGAGCAGCGCCG+AGG + chr6.3:19870740-19870759 MS.gene49811:CDS 60.0%
GGCCTCAACCATGGCAGTGA+GGG - chr6.3:19874396-19874415 None:intergenic 60.0%
GGCTGATCTTAAGGCAGCCG+GGG + chr6.3:19871753-19871772 MS.gene49811:CDS 60.0%
GGTCATCTCCATCGCAGGGA+CGG - chr6.3:19870976-19870995 None:intergenic 60.0%
GGTGCTCAATACCACCGCCA+TGG + chr6.3:19870866-19870885 MS.gene49811:CDS 60.0%
TAACGCTTCCGTCCCTGCGA+TGG + chr6.3:19870965-19870984 MS.gene49811:CDS 60.0%
TCAACCATGGCAGTGAGGGC+TGG - chr6.3:19874392-19874411 None:intergenic 60.0%
TGGCCTCAACCATGGCAGTG+AGG - chr6.3:19874397-19874416 None:intergenic 60.0%
TTAAGGCAGCCGGGGCTTCA+TGG + chr6.3:19871761-19871780 MS.gene49811:CDS 60.0%
TTACCCGTCAGCGTCGTGTC+TGG + chr6.3:19873912-19873931 MS.gene49811:intron 60.0%
! CAGCGCCGAGGATTTGGAGA+AGG + chr6.3:19870752-19870771 MS.gene49811:CDS 60.0%
! GAAGAGCAGCGCCGAGGATT+TGG + chr6.3:19870746-19870765 MS.gene49811:CDS 60.0%
! TATGGCGCTGGAATTGGCCC+CGG + chr6.3:19874221-19874240 MS.gene49811:CDS 60.0%
!! AACGGGCTGGAAGGCATCGT+CGG + chr6.3:19872108-19872127 MS.gene49811:CDS 60.0%
!! AGGGACGGAAGCGTTACCTC+TGG - chr6.3:19870961-19870980 None:intergenic 60.0%
!! AGGTGGAACAGCACCGACCA+TGG - chr6.3:19870886-19870905 None:intergenic 60.0%
!! CTGGAAGGCATCGTCGGCAA+AGG + chr6.3:19872114-19872133 MS.gene49811:CDS 60.0%
!! GCATTGGCCAAGGCATTGGC+TGG + chr6.3:19872391-19872410 MS.gene49811:CDS 60.0%
!! GGAAGCGTTACCTCTGGCCA+TGG - chr6.3:19870955-19870974 None:intergenic 60.0%
!! TGGAACAGCACCGACCATGG+CGG - chr6.3:19870883-19870902 None:intergenic 60.0%
CCGCCGGTCCATCCGTATCT+AGG - chr6.3:19870906-19870925 None:intergenic 65.0%
GAACCCAGCCCTCACTGCCA+TGG + chr6.3:19874385-19874404 MS.gene49811:CDS 65.0%
GGATGGACCGGCGGTGAGAT+TGG + chr6.3:19870912-19870931 MS.gene49811:CDS 65.0%
TCTCTCTTGGGGCCCATGCG+AGG - chr6.3:19870693-19870712 None:intergenic 65.0%
!! AACAGCACCGACCATGGCGG+TGG - chr6.3:19870880-19870899 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 19870666 19874454 19870666 ID=MS.gene49811
chr6.3 mRNA 19870666 19874454 19870666 ID=MS.gene49811.t1;Parent=MS.gene49811
chr6.3 exon 19870666 19871015 19870666 ID=MS.gene49811.t1.exon1;Parent=MS.gene49811.t1
chr6.3 CDS 19870666 19871015 19870666 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19871127 19871214 19871127 ID=MS.gene49811.t1.exon2;Parent=MS.gene49811.t1
chr6.3 CDS 19871127 19871214 19871127 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19871533 19871660 19871533 ID=MS.gene49811.t1.exon3;Parent=MS.gene49811.t1
chr6.3 CDS 19871533 19871660 19871533 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19871744 19872135 19871744 ID=MS.gene49811.t1.exon4;Parent=MS.gene49811.t1
chr6.3 CDS 19871744 19872135 19871744 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19872263 19872426 19872263 ID=MS.gene49811.t1.exon5;Parent=MS.gene49811.t1
chr6.3 CDS 19872263 19872426 19872263 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19872574 19872654 19872574 ID=MS.gene49811.t1.exon6;Parent=MS.gene49811.t1
chr6.3 CDS 19872574 19872654 19872574 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19872744 19872910 19872744 ID=MS.gene49811.t1.exon7;Parent=MS.gene49811.t1
chr6.3 CDS 19872744 19872910 19872744 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19872998 19873103 19872998 ID=MS.gene49811.t1.exon8;Parent=MS.gene49811.t1
chr6.3 CDS 19872998 19873103 19872998 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19873227 19873477 19873227 ID=MS.gene49811.t1.exon9;Parent=MS.gene49811.t1
chr6.3 CDS 19873227 19873477 19873227 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19873580 19873781 19873580 ID=MS.gene49811.t1.exon10;Parent=MS.gene49811.t1
chr6.3 CDS 19873580 19873781 19873580 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
chr6.3 exon 19874086 19874454 19874086 ID=MS.gene49811.t1.exon11;Parent=MS.gene49811.t1
chr6.3 CDS 19874086 19874454 19874086 ID=cds.MS.gene49811.t1;Parent=MS.gene49811.t1
Gene Sequence

>MS.gene49811

ATGGCATCACACATTGTTGGATATCCTCGCATGGGCCCCAAGAGAGAGCTCAAGTTCGCCCTCGAGTCATTCTGGGATAAGAAGAGCAGCGCCGAGGATTTGGAGAAGGTGGCTGCTGACCTCAGGGCATCTATCTGGAAACAGATGTCCAGTGCCGGGATCAAGTATATCCCTAGCAACACTTTCGCATACTATGATCAGGTGCTCAATACCACCGCCATGGTCGGTGCTGTTCCACCTAGATACGGATGGACCGGCGGTGAGATTGGATTTGATACCTACTTCTCCATGGCCAGAGGTAACGCTTCCGTCCCTGCGATGGAGATGACCAAGTGGTTCGACACCAACTAGTAAGTAATGATGGCTCATGTTTTTGTTGTATTGGTATTTGTTTGTTCCTTATGGTTCTGTGGTTATAATGATCTAACTACGAAACTTCTGTGTTTATGTGCATTGATCAGCCACTACATTGTCCCCGAATTGGGACCTGATGTGAAATTCACTTATGCCTCTCACAAGGCTGTGAATGAATACAAGGAAGCCAAGGCGGTAAGCATTTAAAGTCATTTGCGTTAATTTCTTCTTACTTGGAAACCTTAGTTTAGATACTGTCAGTGTTGTCAAATAGCGGTACTATAGCACTACATCGTAGCAGAATTTGACAAAACCATTATCGTTTCATAATACACGATTTAGTAAATGACAACACTGATGGACAGTTAAGCTGTGACTGTGAAAGGCGTTGCTATAAAAAAATTGCGTAAATTTCATTTTTCAGGACAAGTTCTGATGTTGGTTTTTGCATGCGATGTTTTCATGTGTTTATCTATCTCTACATTGTCCCTGAATATTAAATTTTTCTTTCAGCTTGGAGTAGACACAATTCCAGTCCTCGTTGGCCCAGTATCATACTTGTTGCTCTCCAAGCCTGCTAACGGTGTTGATCCATCCTTTGATCTTCTTACTCTCCTCCCAAAAGTCATTGCAGTATACAAGTAAGAAGCACTTATACGATAAACACTTAATTAAGTTTTTTATCTATGTTACTTTCCTAACTCGATTATTATTATTAATTCAGGGAAGTTGTGGCTGATCTTAAGGCAGCCGGGGCTTCATGGATTCAATTTGATGAACCTACACTTGTCTTAGACCTTGAATCACCCAAGTTGAACGCATTTACTGCAGCATACTCAGATCTTGCTTCCGCTTTATCTGGTTTAAATGTTCTTGTTGAGACCTACTTTGCCGACATTCCTGCTGAGGCATACAAGATCCTCACAGGTCTTACTGGTGTCACAGCATTCGGATTTGATTTAGTCCGTGGAGCTAAGACTGTTGATTTGATTAAGGGTGGATTTCCTAGTGGAAAATACTTGTTCGCTGGAGTAGTTGATGGAAGGAACATTTGGGCTAATGATCTTACTTCTTCTCTGACTACATTAAACGGGCTGGAAGGCATCGTCGGCAAAGGTATTTCGTCAAAGATGCATTTCATGAATATTTTGTTAGAAAAAACTTATAACCACTTAATTAAATCGTTTGTCCAAACAGCATAATATTGTCACTCGATATATTTATTTTACAAAAACGTACGCAGATAAACTCGTTGTGTCAACCTCTTGCTCACTTCTCCACACTGCTGTTGATCTTGTTAACGAGACCAAGCTGGATAATGAGATTAAATCATGGCTAGCTTTTGCTGCCCAAAAAGTCGTTGAAGTAAACGCATTGGCCAAGGCATTGGCTGGCCAAAAGGATGAGGTAATCAACCTTCTTATACATCAAACAAAACTTGATAACAAAATTTTATCTTAGTTATTATGGGAAAATTTAAACATCCACAATAAAATACTTTTATCCATCTTCCAAATTATTTATAACAGTAGCTTTTTGTGGTTTCATTTGCAGGCCTTCTTCTCTTCTAACGCTGCAGCTCTGGCTTCAAGAAAGTCCTCTCCAAGAGTGACCAACGAGGCTGTTCAGAAGGCTGTGAGTGTTCAACTGCTCATTTCTGTTGAGTCAGAATTGCGAAAAATTCATTCTCATGTTACTTATGACATATTTTCTTTCCCTCATAGGCTGCTGCATTGAAGGGTTCTGACCATCGTCGTGCCACAAATGTCAGCGCTAGACTGGACGCACAACAAAAGAAGCTCAACCTTCCTGTCCTTCCAACCACGACCATTGGATCCTTCCCTCAGACCCCTGAATTGAGGAGGGTGCGACGTGAATACAAGGCTACCAAGTAAGATATGCTGCTGGGAGCTGATACCTTGGCTTTCTTGATTATTTTTTCATTCTTTTATTGACTCTAATCTTGTTTCTTTTACAGGATCTCAGAGGAAGACTATGTTAAGTCAATGAAAGAGGAAATCCGTCAAGTCGTTGAGCTCCAAGAAAAGCTTGATATCGATGTCCTTGTACACGGAGAGCCTGAGGTTAGTTCTCATATTCATTTACGGACTAAATATTCATGTCCTTGTCCAATTTCCTGTGCCTCATTCAGATGTCGTCGATTACCGATTGTACTTCCAACTAATTGTTTTCACTTTTCATTGCAGAGAAATGATATGGTTGAGTACTTTGGTGAGCAGTTATCAGGCTTTGCCTTCACTGTTAATGGATGGGTGCAATCTTATGGATCTCGCTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGTCCTAAGGCAATGACCGTCTTCTGGTCATCTATGGCTCAGAGCATGACCAAACGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAATTGGTCCTTTGTTCGTAATGACCAACCTAGGTATAAATTCTACGACTCATCTTAATGTGGTCGGCAAAAGACTATAAATAAATGATGTTTACTTTATTGTTATTTCTAACATGGTATTCAACTTTTTTACAGATCCGAGACTTGCTATCAGATTGCTTTGGCTATCAAGGATGAAGTAGAAGACCTTGAAAAAGCCGGTATTACTGTTATCCAAATTGATGAGGCTGCTTTGAGAGAAGGGTTGCCATTGAGGAAATCTGAACAAGCTCACTACTTGGACTGGGCTGTCCATTCTTTCAGGATCACCAATGTTGGTGTGCAGGATACTACTCAGGTACTTCTAAATTACAAATACGAAGCACCGACACTTCAGATCATTGGCATCTTCGATGTGAGACACGCGTCAATGTCTGACACCGACACACATGAAGTTGCGTTCAATTACTTTCGTTCTTTTTATATTATTACCCGTCAGCGTCGTGTCTGGTGTCCGTGTCCAAGCTTTGTAATACAAAACATTATCGGATTTTTTTTTTCCCTTCTTATGTATGATGAAGTTAAATTCATACGATGAACTTATAAAATGTTACATCTATAGTTAATTAACTTACATATCTTGGATTATTAACAATTGACAGATCCACACCCACATGTGCTACTCTCACTTCAATGATATCATCCACTCAATCATTGACATGGATGCTGATGTGATCACCATCGAGAATTCTCGTTCTGATGAAAAGCTCCTAAGGGTGTTCCGTGATGGAGTTAAGTATGGCGCTGGAATTGGCCCCGGAGTTTATGACATTCACTCCCCAAGAATACCACCCACTGAAGAAATTGCTGAGAGGATCAACAAGATGCTTGCAGTGCTTGAGAAAAACGTTTTGTGGGTCAATCCCGATTGTGGTCTCAAAACTCGCAAGTACACCGAGGTGAACCCAGCCCTCACTGCCATGGTTGAGGCCACAAAACGCATCCGCAACCAGCTTGCAAGTGGAAAGTAA
Protein sequence

>MS.gene49811.t1

MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLEKVAADLRASIWKQMSSAGIKYIPSNTFAYYDQVLNTTAMVGAVPPRYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPDVKFTYASHKAVNEYKEAKALGVDTIPVLVGPVSYLLLSKPANGVDPSFDLLTLLPKVIAVYKEVVADLKAAGASWIQFDEPTLVLDLESPKLNAFTAAYSDLASALSGLNVLVETYFADIPAEAYKILTGLTGVTAFGFDLVRGAKTVDLIKGGFPSGKYLFAGVVDGRNIWANDLTSSLTTLNGLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDNEIKSWLAFAAQKVVEVNALAKALAGQKDEAFFSSNAAALASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPVLPTTTIGSFPQTPELRRVRREYKATKISEEDYVKSMKEEIRQVVELQEKLDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQAHYLDWAVHSFRITNVGVQDTTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLRVFRDGVKYGAGIGPGVYDIHSPRIPPTEEIAERINKMLAVLEKNVLWVNPDCGLKTRKYTEVNPALTAMVEATKRIRNQLASGK