AlfalfaGEDB | MS.gene49981

M. sativa cultivar XinJiangDaYe / MS.gene49981

KEGG: -
GO: -
PFAM: PF03168.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49981.t1	XP_013469895.1	92.6	231	17	0	1	231	1	231	1.40E-118	435.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49981.t1	Q9FNH6	30.5	167	112	3	68	230	65	231	2.4e-10	67.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49981.t1	A0A072VR98	92.6	231	17	0	1	231	1	231	1.0e-118	435.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049239	MS.gene49981	0.823245	1.54E-53	-1.69E-46
MS.gene051539	MS.gene49981	0.82451	7.76E-54	-1.69E-46
MS.gene055566	MS.gene49981	0.807567	4.75E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49981.t1	MTR_1g105570	96.970	231	7	0	1	231	1	231	1.19e-172	474
MS.gene49981.t1	MTR_2g087000	28.342	187	116	7	50	228	54	230	2.38e-16	75.5
MS.gene49981.t1	MTR_1g057420	27.647	170	113	3	70	229	39	208	7.50e-16	73.9
MS.gene49981.t1	MTR_2g086790	24.444	180	122	4	49	215	17	195	3.24e-14	69.7
MS.gene49981.t1	MTR_7g106050	25.767	163	116	2	58	215	27	189	3.56e-14	69.3
MS.gene49981.t1	MTR_2g082990	25.143	175	111	5	52	215	10	175	2.80e-12	64.3
MS.gene49981.t1	MTR_3g092790	25.180	139	104	0	74	212	49	187	2.81e-12	63.9
MS.gene49981.t1	MTR_7g118270	23.810	168	124	2	46	212	44	208	2.28e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49981.t1	AT4G05220	50.235	213	106	0	18	230	13	225	1.08e-77	233
MS.gene49981.t1	AT1G61760	46.667	210	112	0	21	230	14	223	3.72e-77	232
MS.gene49981.t1	AT3G44220	25.131	191	136	2	46	229	15	205	6.74e-21	87.4
MS.gene49981.t1	AT5G22200	26.347	167	116	2	70	229	43	209	4.03e-17	77.4
MS.gene49981.t1	AT4G01410	25.000	188	135	3	47	229	40	226	9.93e-17	76.6
MS.gene49981.t1	AT5G06320	26.991	226	156	5	14	230	6	231	5.10e-16	74.7
MS.gene49981.t1	AT2G35980	27.160	162	114	3	50	208	40	200	5.30e-16	74.7
MS.gene49981.t1	AT3G11650	25.592	211	140	6	11	208	7	213	6.09e-16	74.7
MS.gene49981.t1	AT3G11660	26.738	187	113	6	49	218	13	192	2.03e-15	72.8
MS.gene49981.t1	AT5G53730	26.316	171	119	3	64	227	40	210	4.20e-14	69.3
MS.gene49981.t1	AT3G20600	26.519	181	116	5	45	215	8	181	5.63e-14	68.9
MS.gene49981.t1	AT2G27080	28.221	163	115	2	50	211	78	239	7.88e-14	69.3
MS.gene49981.t1	AT2G27080	28.221	163	115	2	50	211	78	239	7.88e-14	69.3
MS.gene49981.t1	AT3G52470	22.086	163	126	1	48	209	16	178	1.29e-13	67.8
MS.gene49981.t1	AT5G06330	27.011	174	105	6	70	228	39	205	1.70e-12	64.7
MS.gene49981.t1	AT2G35460	26.797	153	105	4	50	196	53	204	3.13e-12	64.3
MS.gene49981.t1	AT4G09590	21.250	160	125	1	51	209	22	181	4.67e-12	63.5
MS.gene49981.t1	AT2G35960	24.306	144	108	1	67	209	37	180	8.82e-12	62.8
MS.gene49981.t1	AT3G52460	23.077	221	151	6	25	228	80	298	2.05e-11	62.8
MS.gene49981.t1	AT3G20610	27.976	168	108	6	55	216	17	177	2.68e-11	61.6

Find 84 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGTCTACTTTGAAGGTTATT+TGG	0.164021	1.1:-75550938	None:intergenic
CGATATTCTGGTTGGAATTT+CGG	0.202342	1.1:-75550962	None:intergenic
GATATTCTGGTTGGAATTTC+GGG	0.203305	1.1:-75550961	None:intergenic
CGCTTTATGGGCTTCGGGGT+TGG	0.220922	1.1:-75550702	None:intergenic
GCTTTATGGGCTTCGGGGTT+GGG	0.249115	1.1:-75550701	None:intergenic
CGTAGTAAACCCCGATATTC+TGG	0.251794	1.1:-75550974	None:intergenic
TGGTACGGTGATGTTTATTT+TGG	0.254527	1.1:+75551169	MS.gene49981:CDS
GAAAACGGTGCATACCATTT+TGG	0.278465	1.1:-75550784	None:intergenic
GGTGGAATGATGGCGCTTTA+TGG	0.292275	1.1:-75550715	None:intergenic
TGTGGACCCGGGTGTGAACC+TGG	0.297253	1.1:-75550678	None:intergenic
AACCCGTTGGAGGTAGTATT+TGG	0.307200	1.1:-75550736	None:intergenic
CACAACCCGTGCTACCAAAA+TGG	0.317383	1.1:+75550770	MS.gene49981:CDS
TACCATCAGCCGCATCGTTC+TGG	0.317884	1.1:-75551151	None:intergenic
GTCTACTTTGAAGGTTATTT+GGG	0.323511	1.1:-75550937	None:intergenic
GATGGCGCTTTATGGGCTTC+GGG	0.326368	1.1:-75550707	None:intergenic
TGTCCAACCTTGACTATTAA+CGG	0.331572	1.1:-75551123	None:intergenic
GTGGAATGATGGCGCTTTAT+GGG	0.331797	1.1:-75550714	None:intergenic
TTAAGCCTCCTTGCAATCAT+TGG	0.332356	1.1:+75550807	MS.gene49981:CDS
CGAAATTCCAACCAGAATAT+CGG	0.339338	1.1:+75550963	MS.gene49981:CDS
TATTACAGAAATAATGTTAT+CGG	0.342027	1.1:+75551017	MS.gene49981:CDS
TGATGGCGCTTTATGGGCTT+CGG	0.348191	1.1:-75550708	None:intergenic
ATGCGTGACTTCACCTTAAC+GGG	0.353045	1.1:+75550885	MS.gene49981:CDS
TTCGGGGTTGGGTGTGGACC+CGG	0.354015	1.1:-75550690	None:intergenic
TGCACTGTTGACTTCGCTTA+AGG	0.368283	1.1:+75551317	MS.gene49981:CDS
CGCAACCTGTGATGCGGGTG+TGG	0.374533	1.1:+75551253	MS.gene49981:CDS
ATGGGCTTCGGGGTTGGGTG+TGG	0.390166	1.1:-75550696	None:intergenic
TAAGCCTCCTTGCAATCATT+GGG	0.406266	1.1:+75550808	MS.gene49981:CDS
TGTCTTTGTAAATAGATAAG+AGG	0.427295	1.1:-75551289	None:intergenic
TATGCGTGACTTCACCTTAA+CGG	0.429998	1.1:+75550884	MS.gene49981:CDS
TCGGGGTTGGGTGTGGACCC+GGG	0.437983	1.1:-75550689	None:intergenic
TTGTTGTGCTAGACCCGTTA+AGG	0.438668	1.1:-75550898	None:intergenic
ATTTCGGGCGTCTACTTTGA+AGG	0.439779	1.1:-75550946	None:intergenic
GGCTCATCACCTTCATCGTC+TGG	0.443090	1.1:+75550829	MS.gene49981:CDS
GAAATTCCAACCAGAATATC+GGG	0.445511	1.1:+75550964	MS.gene49981:CDS
ATTACAGAAATAATGTTATC+GGG	0.450804	1.1:+75551018	MS.gene49981:CDS
ACGGGTCTAGCACAACAAAC+CGG	0.450877	1.1:+75550903	MS.gene49981:CDS
CTAGCACAACAAACCGGGTT+CGG	0.467634	1.1:+75550909	MS.gene49981:CDS
GGCCCTTGATAAGATGGAAA+AGG	0.474204	1.1:-75551053	None:intergenic
GATGCGGGTGTGGGATCTAA+TGG	0.480196	1.1:+75551263	MS.gene49981:CDS
TGCAAGGAGGCTTAAGAAAA+CGG	0.480519	1.1:-75550799	None:intergenic
GTCTACGTCCACATCGGCCT+AGG	0.507314	1.1:+75550856	MS.gene49981:CDS
CCATGTCCCAGGTTCACACC+CGG	0.508997	1.1:+75550671	MS.gene49981:CDS
CCGTTGGAGGTAGTATTTGG+TGG	0.511808	1.1:-75550733	None:intergenic
TTGCGTGCATCCTGTGGCGT+TGG	0.515015	1.1:-75551235	None:intergenic
GTGGACCCGGGTGTGAACCT+GGG	0.516789	1.1:-75550677	None:intergenic
GAACCTGGGACATGGTGAAC+GGG	0.519305	1.1:-75550663	None:intergenic
CATGGGAAAGCCAACGCCAC+AGG	0.526318	1.1:+75551225	MS.gene49981:CDS
CCGGGTGTGAACCTGGGACA+TGG	0.526507	1.1:-75550671	None:intergenic
CACCAAATACTACCTCCAAC+GGG	0.529773	1.1:+75550734	MS.gene49981:CDS
TATTTGGGCATTTCCGAACC+CGG	0.531499	1.1:-75550922	None:intergenic
GGCTATCTTGAACCCGTTGG+AGG	0.534937	1.1:-75550746	None:intergenic
GAACGATGCGGCTGATGGTA+CGG	0.537735	1.1:+75551154	MS.gene49981:CDS
TAAATTTAAGATATCCTCAT+GGG	0.538130	1.1:+75551208	MS.gene49981:CDS
CACAGGTTGCGTGCATCCTG+TGG	0.539537	1.1:-75551241	None:intergenic
CGGGGTTTACTACGAAGCTA+TGG	0.543260	1.1:+75550983	MS.gene49981:CDS
TGAGGCTATCTTGAACCCGT+TGG	0.547758	1.1:-75550749	None:intergenic
ATGCACGCAACCTGTGATGC+GGG	0.549811	1.1:+75551248	MS.gene49981:CDS
CCACCAAATACTACCTCCAA+CGG	0.557302	1.1:+75550733	MS.gene49981:CDS
ATGGCGCTTTATGGGCTTCG+GGG	0.557892	1.1:-75550706	None:intergenic
GTCTTTGTAAATAGATAAGA+GGG	0.558200	1.1:-75551288	None:intergenic
GGTAGTATTTGGTGGAATGA+TGG	0.558698	1.1:-75550725	None:intergenic
GCAACCTGTGATGCGGGTGT+GGG	0.565487	1.1:+75551254	MS.gene49981:CDS
ATCCAGAACGATGCGGCTGA+TGG	0.570005	1.1:+75551149	MS.gene49981:CDS
CGGGTCTAGCACAACAAACC+GGG	0.570366	1.1:+75550904	MS.gene49981:CDS
TAGACTTAGCCAGACGATGA+AGG	0.572379	1.1:-75550838	None:intergenic
TGAACCTGGGACATGGTGAA+CGG	0.573154	1.1:-75550664	None:intergenic
GTTTACTACGAAGCTATGGA+AGG	0.573329	1.1:+75550987	MS.gene49981:CDS
CATGTCCCAGGTTCACACCC+GGG	0.589159	1.1:+75550672	MS.gene49981:CDS
TTAAATTTAAGATATCCTCA+TGG	0.589257	1.1:+75551207	MS.gene49981:CDS
TGACCGTTAATAGTCAAGGT+TGG	0.592357	1.1:+75551120	MS.gene49981:CDS
GTAAACCCCGATATTCTGGT+TGG	0.593043	1.1:-75550970	None:intergenic
TGATGAGCCCAATGATTGCA+AGG	0.593779	1.1:-75550815	None:intergenic
ATACCCGTTCACCATGTCCC+AGG	0.594284	1.1:+75550660	MS.gene49981:CDS
TATCTATTTACAAAGACAAG+AGG	0.595437	1.1:+75551294	MS.gene49981:CDS
ACGTTGACCGTTAATAGTCA+AGG	0.604071	1.1:+75551116	MS.gene49981:CDS
AGATCCCACACCCGCATCAC+AGG	0.604250	1.1:-75551258	None:intergenic
GTGGCGTTGGCTTTCCCATG+AGG	0.613905	1.1:-75551222	None:intergenic
GATGCACGCAACCTGTGATG+CGG	0.652992	1.1:+75551247	MS.gene49981:CDS
GGCTAAGTCTACGTCCACAT+CGG	0.673440	1.1:+75550850	MS.gene49981:CDS
TTTACTACGAAGCTATGGAA+GGG	0.675331	1.1:+75550988	MS.gene49981:CDS
AAATTCCAACCAGAATATCG+GGG	0.692425	1.1:+75550965	MS.gene49981:CDS
TTGACTATTAACGGTCAACG+TGG	0.702705	1.1:-75551114	None:intergenic
GACAGAAATCCAGAACGATG+CGG	0.718645	1.1:+75551142	MS.gene49981:CDS
TGAGCCCAATGATTGCAAGG+AGG	0.779122	1.1:-75550812	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATTACAGAAATAATGTTAT+CGG	+	chr1.1:75551017-75551036	MS.gene49981:CDS	15.0%
!!	ATTACAGAAATAATGTTATC+GGG	+	chr1.1:75551018-75551037	MS.gene49981:CDS	20.0%
!!!	TAAATTTAAGATATCCTCAT+GGG	+	chr1.1:75551208-75551227	MS.gene49981:CDS	20.0%
!!!	TTAAATTTAAGATATCCTCA+TGG	+	chr1.1:75551207-75551226	MS.gene49981:CDS	20.0%
!	AAAAACACTACAAAAGTGAA+CGG	+	chr1.1:75551077-75551096	MS.gene49981:CDS	25.0%
!	GTCTTTGTAAATAGATAAGA+GGG	-	chr1.1:75551291-75551310	None:intergenic	25.0%
!	TATCTATTTACAAAGACAAG+AGG	+	chr1.1:75551294-75551313	MS.gene49981:CDS	25.0%
!	TGTCTTTGTAAATAGATAAG+AGG	-	chr1.1:75551292-75551311	None:intergenic	25.0%
!!!	TTCACTTTTGTAGTGTTTTT+TGG	-	chr1.1:75551077-75551096	None:intergenic	25.0%
!	ATACCTTTTCCATCTTATCA+AGG	+	chr1.1:75551050-75551069	MS.gene49981:CDS	30.0%
!	GTCTACTTTGAAGGTTATTT+GGG	-	chr1.1:75550940-75550959	None:intergenic	30.0%
!	TACCTTTTCCATCTTATCAA+GGG	+	chr1.1:75551051-75551070	MS.gene49981:CDS	30.0%
	AAATTCCAACCAGAATATCG+GGG	+	chr1.1:75550965-75550984	MS.gene49981:CDS	35.0%
	AAGTCACGCATAAAAAACCT+AGG	-	chr1.1:75550876-75550895	None:intergenic	35.0%
	CGAAATTCCAACCAGAATAT+CGG	+	chr1.1:75550963-75550982	MS.gene49981:CDS	35.0%
	GAAATTCCAACCAGAATATC+GGG	+	chr1.1:75550964-75550983	MS.gene49981:CDS	35.0%
	TGTCCAACCTTGACTATTAA+CGG	-	chr1.1:75551126-75551145	None:intergenic	35.0%
	TTTACTACGAAGCTATGGAA+GGG	+	chr1.1:75550988-75551007	MS.gene49981:CDS	35.0%
!	AAAGTGAACGGAGTTTTCAA+TGG	+	chr1.1:75551089-75551108	MS.gene49981:CDS	35.0%
!	CGATATTCTGGTTGGAATTT+CGG	-	chr1.1:75550965-75550984	None:intergenic	35.0%
!	CGTCTACTTTGAAGGTTATT+TGG	-	chr1.1:75550941-75550960	None:intergenic	35.0%
!	GATATTCTGGTTGGAATTTC+GGG	-	chr1.1:75550964-75550983	None:intergenic	35.0%
!	TGGTACGGTGATGTTTATTT+TGG	+	chr1.1:75551169-75551188	MS.gene49981:CDS	35.0%
!!!	TTTTTTGGCCCTTGATAAGA+TGG	-	chr1.1:75551062-75551081	None:intergenic	35.0%
	ACGTTGACCGTTAATAGTCA+AGG	+	chr1.1:75551116-75551135	MS.gene49981:CDS	40.0%
	ATAAAAAACCTAGGCCGATG+TGG	-	chr1.1:75550867-75550886	None:intergenic	40.0%
	GTTTACTACGAAGCTATGGA+AGG	+	chr1.1:75550987-75551006	MS.gene49981:CDS	40.0%
	TAAGCCTCCTTGCAATCATT+GGG	+	chr1.1:75550808-75550827	MS.gene49981:CDS	40.0%
	TATGCGTGACTTCACCTTAA+CGG	+	chr1.1:75550884-75550903	MS.gene49981:CDS	40.0%
	TGACCGTTAATAGTCAAGGT+TGG	+	chr1.1:75551120-75551139	MS.gene49981:CDS	40.0%
	TGCAAGGAGGCTTAAGAAAA+CGG	-	chr1.1:75550802-75550821	None:intergenic	40.0%
	TTAAGCCTCCTTGCAATCAT+TGG	+	chr1.1:75550807-75550826	MS.gene49981:CDS	40.0%
	TTGACTATTAACGGTCAACG+TGG	-	chr1.1:75551117-75551136	None:intergenic	40.0%
!	GAAAACGGTGCATACCATTT+TGG	-	chr1.1:75550787-75550806	None:intergenic	40.0%
!	GGTAGTATTTGGTGGAATGA+TGG	-	chr1.1:75550728-75550747	None:intergenic	40.0%
!!	TGCATACCATTTTGGTAGCA+CGG	-	chr1.1:75550779-75550798	None:intergenic	40.0%
	AACCCGTTGGAGGTAGTATT+TGG	-	chr1.1:75550739-75550758	None:intergenic	45.0%
	ATGCGTGACTTCACCTTAAC+GGG	+	chr1.1:75550885-75550904	MS.gene49981:CDS	45.0%
	ATTTCGGGCGTCTACTTTGA+AGG	-	chr1.1:75550949-75550968	None:intergenic	45.0%
	CACCAAATACTACCTCCAAC+GGG	+	chr1.1:75550734-75550753	MS.gene49981:CDS	45.0%
	CCACCAAATACTACCTCCAA+CGG	+	chr1.1:75550733-75550752	MS.gene49981:CDS	45.0%
	CGTAGTAAACCCCGATATTC+TGG	-	chr1.1:75550977-75550996	None:intergenic	45.0%
	GACAGAAATCCAGAACGATG+CGG	+	chr1.1:75551142-75551161	MS.gene49981:CDS	45.0%
	GGCCCTTGATAAGATGGAAA+AGG	-	chr1.1:75551056-75551075	None:intergenic	45.0%
	GTAAACCCCGATATTCTGGT+TGG	-	chr1.1:75550973-75550992	None:intergenic	45.0%
	TAGACTTAGCCAGACGATGA+AGG	-	chr1.1:75550841-75550860	None:intergenic	45.0%
	TATTTGGGCATTTCCGAACC+CGG	-	chr1.1:75550925-75550944	None:intergenic	45.0%
	TGATGAGCCCAATGATTGCA+AGG	-	chr1.1:75550818-75550837	None:intergenic	45.0%
	TTGTTGTGCTAGACCCGTTA+AGG	-	chr1.1:75550901-75550920	None:intergenic	45.0%
!	GTGGAATGATGGCGCTTTAT+GGG	-	chr1.1:75550717-75550736	None:intergenic	45.0%
!!	GCATACCATTTTGGTAGCAC+GGG	-	chr1.1:75550778-75550797	None:intergenic	45.0%
	ACGGGTCTAGCACAACAAAC+CGG	+	chr1.1:75550903-75550922	MS.gene49981:CDS	50.0%
	CACAACCCGTGCTACCAAAA+TGG	+	chr1.1:75550770-75550789	MS.gene49981:CDS	50.0%
	CCGTTGGAGGTAGTATTTGG+TGG	-	chr1.1:75550736-75550755	None:intergenic	50.0%
	CGGGGTTTACTACGAAGCTA+TGG	+	chr1.1:75550983-75551002	MS.gene49981:CDS	50.0%
	CTAGCACAACAAACCGGGTT+CGG	+	chr1.1:75550909-75550928	MS.gene49981:CDS	50.0%
	GGCTAAGTCTACGTCCACAT+CGG	+	chr1.1:75550850-75550869	MS.gene49981:CDS	50.0%
	TGAACCTGGGACATGGTGAA+CGG	-	chr1.1:75550667-75550686	None:intergenic	50.0%
	TGAGCCCAATGATTGCAAGG+AGG	-	chr1.1:75550815-75550834	None:intergenic	50.0%
	TGAGGCTATCTTGAACCCGT+TGG	-	chr1.1:75550752-75550771	None:intergenic	50.0%
!	GGTGGAATGATGGCGCTTTA+TGG	-	chr1.1:75550718-75550737	None:intergenic	50.0%
!	TGATGGCGCTTTATGGGCTT+CGG	-	chr1.1:75550711-75550730	None:intergenic	50.0%
!!	TTTTGGTAGCACGGGTTGTG+AGG	-	chr1.1:75550770-75550789	None:intergenic	50.0%
	ATACCCGTTCACCATGTCCC+AGG	+	chr1.1:75550660-75550679	MS.gene49981:CDS	55.0%
	ATCCAGAACGATGCGGCTGA+TGG	+	chr1.1:75551149-75551168	MS.gene49981:CDS	55.0%
	ATGCACGCAACCTGTGATGC+GGG	+	chr1.1:75551248-75551267	MS.gene49981:CDS	55.0%
	ATGGCGCTTTATGGGCTTCG+GGG	-	chr1.1:75550709-75550728	None:intergenic	55.0%
	CGGGTCTAGCACAACAAACC+GGG	+	chr1.1:75550904-75550923	MS.gene49981:CDS	55.0%
	GAACCTGGGACATGGTGAAC+GGG	-	chr1.1:75550666-75550685	None:intergenic	55.0%
	GAACGATGCGGCTGATGGTA+CGG	+	chr1.1:75551154-75551173	MS.gene49981:CDS	55.0%
	GATGCACGCAACCTGTGATG+CGG	+	chr1.1:75551247-75551266	MS.gene49981:CDS	55.0%
	GATGCGGGTGTGGGATCTAA+TGG	+	chr1.1:75551263-75551282	MS.gene49981:CDS	55.0%
	GATGGCGCTTTATGGGCTTC+GGG	-	chr1.1:75550710-75550729	None:intergenic	55.0%
	GCTTTATGGGCTTCGGGGTT+GGG	-	chr1.1:75550704-75550723	None:intergenic	55.0%
	GGCTATCTTGAACCCGTTGG+AGG	-	chr1.1:75550749-75550768	None:intergenic	55.0%
	GGCTCATCACCTTCATCGTC+TGG	+	chr1.1:75550829-75550848	MS.gene49981:CDS	55.0%
	TACCATCAGCCGCATCGTTC+TGG	-	chr1.1:75551154-75551173	None:intergenic	55.0%
	AGATCCCACACCCGCATCAC+AGG	-	chr1.1:75551261-75551280	None:intergenic	60.0%
	CACAGGTTGCGTGCATCCTG+TGG	-	chr1.1:75551244-75551263	None:intergenic	60.0%
	CATGGGAAAGCCAACGCCAC+AGG	+	chr1.1:75551225-75551244	MS.gene49981:CDS	60.0%
	CATGTCCCAGGTTCACACCC+GGG	+	chr1.1:75550672-75550691	MS.gene49981:CDS	60.0%
	CCATGTCCCAGGTTCACACC+CGG	+	chr1.1:75550671-75550690	MS.gene49981:CDS	60.0%
	CGCTTTATGGGCTTCGGGGT+TGG	-	chr1.1:75550705-75550724	None:intergenic	60.0%
	GCAACCTGTGATGCGGGTGT+GGG	+	chr1.1:75551254-75551273	MS.gene49981:CDS	60.0%
	GTCTACGTCCACATCGGCCT+AGG	+	chr1.1:75550856-75550875	MS.gene49981:CDS	60.0%
	TTGCGTGCATCCTGTGGCGT+TGG	-	chr1.1:75551238-75551257	None:intergenic	60.0%
!!	GTGGCGTTGGCTTTCCCATG+AGG	-	chr1.1:75551225-75551244	None:intergenic	60.0%
	ATGGGCTTCGGGGTTGGGTG+TGG	-	chr1.1:75550699-75550718	None:intergenic	65.0%
	CCGGGTGTGAACCTGGGACA+TGG	-	chr1.1:75550674-75550693	None:intergenic	65.0%
	CGCAACCTGTGATGCGGGTG+TGG	+	chr1.1:75551253-75551272	MS.gene49981:CDS	65.0%
	GTGGACCCGGGTGTGAACCT+GGG	-	chr1.1:75550680-75550699	None:intergenic	65.0%
	TGTGGACCCGGGTGTGAACC+TGG	-	chr1.1:75550681-75550700	None:intergenic	65.0%
	TTCGGGGTTGGGTGTGGACC+CGG	-	chr1.1:75550693-75550712	None:intergenic	65.0%
	TCGGGGTTGGGTGTGGACCC+GGG	-	chr1.1:75550692-75550711	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	75550642	75551337	75550642	ID=MS.gene49981
chr1.1	mRNA	75550642	75551337	75550642	ID=MS.gene49981.t1;Parent=MS.gene49981
chr1.1	exon	75550642	75551337	75550642	ID=MS.gene49981.t1.exon1;Parent=MS.gene49981.t1
chr1.1	CDS	75550642	75551337	75550642	ID=cds.MS.gene49981.t1;Parent=MS.gene49981.t1

Gene Sequence

>MS.gene49981

ATGTACGGAAACGATCACATACCCGTTCACCATGTCCCAGGTTCACACCCGGGTCCACACCCAACCCCGAAGCCCATAAAGCGCCATCATTCCACCAAATACTACCTCCAACGGGTTCAAGATAGCCTCACAACCCGTGCTACCAAAATGGTATGCACCGTTTTCTTAAGCCTCCTTGCAATCATTGGGCTCATCACCTTCATCGTCTGGCTAAGTCTACGTCCACATCGGCCTAGGTTTTTTATGCGTGACTTCACCTTAACGGGTCTAGCACAACAAACCGGGTTCGGAAATGCCCAAATAACCTTCAAAGTAGACGCCCGAAATTCCAACCAGAATATCGGGGTTTACTACGAAGCTATGGAAGGGTCACTTTATTACAGAAATAATGTTATCGGGTCGATGCAGATACCTTTTCCATCTTATCAAGGGCCAAAAAACACTACAAAAGTGAACGGAGTTTTCAATGGTGCCACGTTGACCGTTAATAGTCAAGGTTGGACAGAAATCCAGAACGATGCGGCTGATGGTACGGTGATGTTTATTTTGGAATTGACTACTGTGATTAAATTTAAGATATCCTCATGGGAAAGCCAACGCCACAGGATGCACGCAACCTGTGATGCGGGTGTGGGATCTAATGGCACCCTCTTATCTATTTACAAAGACAAGAGGTGCACTGTTGACTTCGCTTAA

Protein sequence

>MS.gene49981.t1

MYGNDHIPVHHVPGSHPGPHPTPKPIKRHHSTKYYLQRVQDSLTTRATKMVCTVFLSLLAIIGLITFIVWLSLRPHRPRFFMRDFTLTGLAQQTGFGNAQITFKVDARNSNQNIGVYYEAMEGSLYYRNNVIGSMQIPFPSYQGPKNTTKVNGVFNGATLTVNSQGWTEIQNDAADGTVMFILELTTVIKFKISSWESQRHRMHATCDAGVGSNGTLLSIYKDKRCTVDFA