Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50124.t1 | XP_003616489.2 | 93.1 | 435 | 27 | 3 | 1 | 434 | 1 | 433 | 1.90E-230 | 808.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50124.t1 | Q6XBF8 | 51.2 | 432 | 204 | 6 | 6 | 434 | 9 | 436 | 7.7e-119 | 428.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50124.t1 | G7K1Z4 | 93.1 | 435 | 27 | 3 | 1 | 434 | 1 | 433 | 1.4e-230 | 808.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene50124 | MS.gene049227 | PPI |
MS.gene50124 | MS.gene013256 | PPI |
MS.gene40949 | MS.gene50124 | PPI |
MS.gene50124 | MS.gene06341 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50124.t1 | MTR_5g080890 | 92.890 | 436 | 28 | 3 | 1 | 435 | 1 | 434 | 0.0 | 822 |
MS.gene50124.t1 | MTR_5g080960 | 92.890 | 436 | 28 | 3 | 1 | 435 | 1 | 434 | 0.0 | 821 |
MS.gene50124.t1 | MTR_8g096990 | 75.862 | 435 | 102 | 2 | 1 | 435 | 1 | 432 | 0.0 | 679 |
MS.gene50124.t1 | MTR_8g038280 | 71.689 | 438 | 119 | 2 | 1 | 435 | 1 | 436 | 0.0 | 638 |
MS.gene50124.t1 | MTR_5g044770 | 71.954 | 435 | 118 | 3 | 1 | 435 | 1 | 431 | 0.0 | 632 |
MS.gene50124.t1 | MTR_8g038250 | 71.071 | 439 | 100 | 3 | 1 | 435 | 1 | 416 | 0.0 | 620 |
MS.gene50124.t1 | MTR_6g090290 | 68.950 | 438 | 130 | 3 | 1 | 434 | 1 | 436 | 0.0 | 603 |
MS.gene50124.t1 | MTR_4g109760 | 69.195 | 435 | 98 | 4 | 1 | 435 | 1 | 399 | 0.0 | 556 |
MS.gene50124.t1 | MTR_8g038310 | 61.839 | 435 | 143 | 4 | 1 | 434 | 1 | 413 | 0.0 | 545 |
MS.gene50124.t1 | MTR_3g028120 | 54.436 | 417 | 181 | 6 | 25 | 434 | 24 | 438 | 3.11e-152 | 439 |
MS.gene50124.t1 | MTR_5g038360 | 51.598 | 438 | 199 | 8 | 5 | 435 | 6 | 437 | 8.26e-148 | 427 |
MS.gene50124.t1 | MTR_2g067830 | 54.390 | 410 | 176 | 8 | 32 | 434 | 1 | 406 | 2.57e-142 | 412 |
MS.gene50124.t1 | MTR_6g088760 | 54.187 | 406 | 176 | 7 | 1 | 398 | 1 | 404 | 1.60e-141 | 414 |
MS.gene50124.t1 | MTR_0024s0040 | 53.253 | 415 | 179 | 9 | 30 | 434 | 1 | 410 | 1.51e-134 | 393 |
MS.gene50124.t1 | MTR_5g044570 | 48.869 | 442 | 187 | 11 | 1 | 434 | 1 | 411 | 1.14e-131 | 385 |
MS.gene50124.t1 | MTR_2g105300 | 51.351 | 407 | 165 | 9 | 32 | 431 | 1 | 381 | 3.83e-130 | 380 |
MS.gene50124.t1 | MTR_0036s0070 | 42.529 | 435 | 225 | 12 | 11 | 435 | 8 | 427 | 4.59e-109 | 328 |
MS.gene50124.t1 | MTR_0036s0050 | 42.597 | 439 | 226 | 12 | 11 | 434 | 8 | 435 | 2.57e-106 | 322 |
MS.gene50124.t1 | MTR_0036s0110 | 41.060 | 453 | 237 | 10 | 1 | 434 | 1 | 442 | 5.78e-105 | 318 |
MS.gene50124.t1 | MTR_5g008070 | 43.062 | 418 | 218 | 9 | 21 | 433 | 23 | 425 | 3.08e-102 | 311 |
MS.gene50124.t1 | MTR_2g059490 | 48.023 | 354 | 176 | 7 | 87 | 434 | 59 | 410 | 2.11e-101 | 309 |
MS.gene50124.t1 | MTR_2g059460 | 42.143 | 420 | 197 | 12 | 23 | 434 | 25 | 406 | 1.07e-94 | 291 |
MS.gene50124.t1 | MTR_5g008110 | 43.944 | 355 | 189 | 7 | 85 | 434 | 66 | 415 | 7.43e-93 | 286 |
MS.gene50124.t1 | MTR_5g008150 | 40.052 | 382 | 218 | 7 | 59 | 434 | 36 | 412 | 1.53e-91 | 283 |
MS.gene50124.t1 | MTR_3g097150 | 37.882 | 425 | 240 | 12 | 22 | 434 | 36 | 448 | 1.06e-84 | 266 |
MS.gene50124.t1 | MTR_1g060750 | 35.980 | 403 | 222 | 9 | 40 | 434 | 2 | 376 | 6.92e-72 | 231 |
MS.gene50124.t1 | MTR_4g045857 | 42.484 | 306 | 139 | 8 | 14 | 312 | 13 | 288 | 1.25e-65 | 212 |
MS.gene50124.t1 | MTR_5g008090 | 40.468 | 299 | 167 | 7 | 142 | 434 | 21 | 314 | 1.01e-64 | 211 |
MS.gene50124.t1 | MTR_7g117430 | 37.950 | 361 | 195 | 11 | 85 | 432 | 140 | 484 | 1.62e-58 | 199 |
MS.gene50124.t1 | MTR_1g115210 | 33.488 | 430 | 252 | 15 | 21 | 432 | 73 | 486 | 6.85e-57 | 195 |
MS.gene50124.t1 | MTR_1g039270 | 34.174 | 436 | 232 | 17 | 28 | 432 | 58 | 469 | 3.93e-56 | 192 |
MS.gene50124.t1 | MTR_6g088765 | 43.028 | 251 | 104 | 5 | 160 | 407 | 3 | 217 | 7.86e-53 | 177 |
MS.gene50124.t1 | MTR_2g028190 | 34.571 | 431 | 246 | 16 | 28 | 432 | 31 | 451 | 1.33e-52 | 182 |
MS.gene50124.t1 | MTR_1g111350 | 33.652 | 419 | 238 | 14 | 21 | 432 | 82 | 467 | 2.20e-51 | 180 |
MS.gene50124.t1 | MTR_6g085010 | 34.857 | 350 | 209 | 11 | 87 | 432 | 157 | 491 | 1.01e-48 | 173 |
MS.gene50124.t1 | MTR_8g103880 | 33.041 | 342 | 206 | 12 | 87 | 420 | 117 | 443 | 4.37e-45 | 162 |
MS.gene50124.t1 | MTR_3g046300 | 28.603 | 458 | 282 | 12 | 11 | 435 | 16 | 461 | 7.48e-44 | 159 |
MS.gene50124.t1 | MTR_3g053710 | 33.425 | 362 | 216 | 11 | 85 | 432 | 116 | 466 | 4.62e-41 | 152 |
MS.gene50124.t1 | MTR_4g007740 | 32.231 | 363 | 213 | 13 | 87 | 433 | 133 | 478 | 6.24e-41 | 152 |
MS.gene50124.t1 | MTR_5g091130 | 32.546 | 381 | 229 | 11 | 74 | 432 | 179 | 553 | 1.31e-40 | 152 |
MS.gene50124.t1 | MTR_2g055840 | 29.211 | 380 | 233 | 13 | 78 | 432 | 5 | 373 | 6.77e-39 | 144 |
MS.gene50124.t1 | MTR_3g068000 | 27.907 | 387 | 221 | 14 | 89 | 435 | 76 | 444 | 1.11e-32 | 129 |
MS.gene50124.t1 | MTR_7g062360 | 29.243 | 383 | 213 | 17 | 89 | 432 | 62 | 425 | 1.79e-32 | 128 |
MS.gene50124.t1 | MTR_7g080230 | 26.906 | 446 | 263 | 17 | 30 | 435 | 11 | 433 | 2.15e-31 | 125 |
MS.gene50124.t1 | MTR_2g070430 | 27.460 | 437 | 271 | 17 | 28 | 429 | 25 | 450 | 2.57e-31 | 125 |
MS.gene50124.t1 | MTR_1g078240 | 27.720 | 386 | 232 | 17 | 81 | 435 | 63 | 432 | 1.94e-29 | 120 |
MS.gene50124.t1 | MTR_3g053980 | 31.285 | 358 | 223 | 10 | 85 | 432 | 141 | 485 | 2.56e-29 | 119 |
MS.gene50124.t1 | MTR_2g063110 | 27.665 | 394 | 237 | 11 | 85 | 432 | 117 | 508 | 4.71e-29 | 119 |
MS.gene50124.t1 | MTR_1g078240 | 28.351 | 388 | 228 | 18 | 81 | 435 | 63 | 433 | 8.76e-29 | 118 |
MS.gene50124.t1 | MTR_7g021510 | 27.179 | 390 | 240 | 17 | 73 | 435 | 64 | 436 | 1.09e-28 | 118 |
MS.gene50124.t1 | MTR_6g084710 | 27.619 | 420 | 248 | 20 | 49 | 432 | 151 | 550 | 8.56e-28 | 116 |
MS.gene50124.t1 | MTR_8g094590 | 27.926 | 376 | 222 | 16 | 85 | 433 | 72 | 425 | 9.83e-28 | 114 |
MS.gene50124.t1 | MTR_4g008110 | 52.991 | 117 | 31 | 1 | 158 | 274 | 45 | 137 | 1.18e-27 | 107 |
MS.gene50124.t1 | MTR_8g094590 | 32.950 | 261 | 143 | 10 | 85 | 335 | 72 | 310 | 3.08e-26 | 108 |
MS.gene50124.t1 | MTR_2g084550 | 30.423 | 378 | 219 | 16 | 85 | 433 | 76 | 438 | 6.61e-26 | 110 |
MS.gene50124.t1 | MTR_7g105850 | 26.860 | 484 | 284 | 21 | 2 | 435 | 5 | 468 | 7.48e-26 | 109 |
MS.gene50124.t1 | MTR_6g084710 | 28.916 | 332 | 201 | 15 | 49 | 365 | 151 | 462 | 7.54e-26 | 110 |
MS.gene50124.t1 | MTR_8g094590 | 30.851 | 282 | 161 | 11 | 85 | 354 | 72 | 331 | 8.93e-26 | 108 |
MS.gene50124.t1 | MTR_3g065160 | 26.486 | 370 | 232 | 14 | 88 | 434 | 76 | 428 | 1.87e-25 | 108 |
MS.gene50124.t1 | MTR_4g095270 | 25.341 | 367 | 237 | 12 | 85 | 434 | 79 | 425 | 3.20e-25 | 108 |
MS.gene50124.t1 | MTR_4g095270 | 25.341 | 367 | 237 | 12 | 85 | 434 | 79 | 425 | 3.47e-25 | 108 |
MS.gene50124.t1 | MTR_5g016260 | 24.932 | 369 | 236 | 12 | 85 | 434 | 87 | 433 | 4.21e-25 | 108 |
MS.gene50124.t1 | MTR_4g023650 | 27.595 | 395 | 227 | 19 | 75 | 434 | 51 | 421 | 5.00e-25 | 106 |
MS.gene50124.t1 | MTR_1g078240 | 29.560 | 318 | 183 | 15 | 81 | 373 | 63 | 364 | 5.82e-25 | 105 |
MS.gene50124.t1 | MTR_5g016260 | 24.932 | 369 | 236 | 12 | 85 | 434 | 87 | 433 | 7.00e-25 | 107 |
MS.gene50124.t1 | MTR_3g087780 | 26.164 | 451 | 260 | 18 | 28 | 432 | 27 | 450 | 8.28e-25 | 107 |
MS.gene50124.t1 | MTR_0945s0010 | 42.742 | 124 | 69 | 2 | 311 | 433 | 1 | 123 | 1.01e-24 | 100 |
MS.gene50124.t1 | MTR_3g096930 | 25.594 | 379 | 230 | 15 | 85 | 435 | 83 | 437 | 1.26e-24 | 105 |
MS.gene50124.t1 | MTR_1g037630 | 27.934 | 426 | 266 | 16 | 26 | 433 | 27 | 429 | 1.41e-24 | 105 |
MS.gene50124.t1 | MTR_1g061940 | 28.912 | 377 | 231 | 16 | 85 | 435 | 82 | 447 | 1.44e-24 | 106 |
MS.gene50124.t1 | MTR_4g056420 | 29.058 | 382 | 218 | 18 | 85 | 433 | 76 | 437 | 2.46e-24 | 105 |
MS.gene50124.t1 | MTR_1g029810 | 26.455 | 378 | 228 | 18 | 85 | 434 | 56 | 411 | 3.27e-24 | 104 |
MS.gene50124.t1 | MTR_1g029810 | 26.190 | 378 | 229 | 18 | 85 | 434 | 56 | 411 | 4.43e-24 | 104 |
MS.gene50124.t1 | MTR_8g075090 | 29.032 | 372 | 207 | 19 | 92 | 434 | 118 | 461 | 1.08e-23 | 103 |
MS.gene50124.t1 | MTR_5g022880 | 26.179 | 424 | 254 | 16 | 45 | 432 | 61 | 461 | 3.65e-23 | 102 |
MS.gene50124.t1 | MTR_8g075090 | 28.919 | 370 | 206 | 19 | 92 | 432 | 118 | 459 | 4.92e-23 | 101 |
MS.gene50124.t1 | MTR_4g023630 | 26.531 | 392 | 235 | 17 | 75 | 434 | 51 | 421 | 1.07e-22 | 100 |
MS.gene50124.t1 | MTR_5g061690 | 26.966 | 445 | 253 | 22 | 28 | 427 | 25 | 442 | 3.10e-22 | 99.4 |
MS.gene50124.t1 | MTR_3g014290 | 28.836 | 378 | 235 | 14 | 72 | 433 | 58 | 417 | 6.07e-22 | 97.8 |
MS.gene50124.t1 | MTR_7g080230 | 26.554 | 354 | 214 | 13 | 110 | 435 | 28 | 363 | 6.84e-22 | 97.4 |
MS.gene50124.t1 | MTR_2g103340 | 43.200 | 125 | 26 | 2 | 21 | 145 | 34 | 113 | 6.94e-22 | 93.2 |
MS.gene50124.t1 | MTR_2g103340 | 50.633 | 79 | 30 | 3 | 352 | 429 | 89 | 159 | 6.91e-11 | 61.6 |
MS.gene50124.t1 | MTR_7g102750 | 27.441 | 379 | 232 | 18 | 85 | 435 | 80 | 443 | 8.60e-22 | 97.8 |
MS.gene50124.t1 | MTR_5g080330 | 28.610 | 367 | 185 | 16 | 103 | 435 | 2 | 325 | 7.70e-21 | 94.7 |
MS.gene50124.t1 | MTR_8g075090 | 29.819 | 332 | 186 | 17 | 92 | 398 | 118 | 427 | 1.58e-20 | 94.0 |
MS.gene50124.t1 | MTR_5g077850 | 25.526 | 380 | 227 | 15 | 88 | 434 | 83 | 439 | 3.57e-20 | 92.8 |
MS.gene50124.t1 | MTR_4g100990 | 27.206 | 408 | 223 | 17 | 87 | 432 | 75 | 470 | 9.13e-20 | 91.7 |
MS.gene50124.t1 | MTR_7g102750 | 26.891 | 357 | 219 | 16 | 45 | 373 | 35 | 377 | 2.63e-18 | 87.0 |
MS.gene50124.t1 | MTR_3g087780 | 28.349 | 321 | 192 | 13 | 129 | 432 | 45 | 344 | 1.21e-17 | 85.1 |
MS.gene50124.t1 | MTR_3g087780 | 28.037 | 321 | 193 | 12 | 129 | 432 | 9 | 308 | 1.29e-17 | 84.7 |
MS.gene50124.t1 | MTR_5g061690 | 29.412 | 306 | 175 | 17 | 138 | 427 | 23 | 303 | 2.22e-17 | 84.0 |
MS.gene50124.t1 | MTR_8g039540 | 26.222 | 450 | 285 | 18 | 9 | 433 | 7 | 434 | 3.11e-17 | 84.0 |
MS.gene50124.t1 | MTR_3g006820 | 24.282 | 383 | 250 | 14 | 78 | 434 | 46 | 414 | 9.52e-17 | 82.4 |
MS.gene50124.t1 | MTR_8g075010 | 25.876 | 371 | 222 | 16 | 90 | 432 | 104 | 449 | 2.99e-16 | 81.3 |
MS.gene50124.t1 | MTR_5g077920 | 25.253 | 396 | 250 | 14 | 72 | 435 | 48 | 429 | 2.44e-15 | 78.2 |
MS.gene50124.t1 | MTR_3g100500 | 29.041 | 365 | 219 | 16 | 85 | 432 | 96 | 437 | 5.11e-15 | 77.0 |
MS.gene50124.t1 | MTR_1g072380 | 22.807 | 399 | 232 | 15 | 87 | 430 | 57 | 434 | 2.49e-12 | 68.9 |
MS.gene50124.t1 | MTR_2g037710 | 27.315 | 216 | 128 | 9 | 224 | 432 | 12 | 205 | 4.04e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50124.t1 | AT1G64830 | 52.068 | 411 | 191 | 5 | 26 | 434 | 24 | 430 | 1.01e-142 | 414 |
MS.gene50124.t1 | AT5G33340 | 52.555 | 411 | 188 | 6 | 27 | 434 | 30 | 436 | 1.38e-137 | 402 |
MS.gene50124.t1 | AT2G35615 | 46.259 | 441 | 213 | 8 | 14 | 433 | 7 | 444 | 2.74e-117 | 350 |
MS.gene50124.t1 | AT1G31450 | 44.921 | 443 | 220 | 9 | 5 | 433 | 10 | 442 | 1.09e-109 | 331 |
MS.gene50124.t1 | AT2G28010 | 39.906 | 426 | 203 | 11 | 13 | 433 | 15 | 392 | 1.66e-87 | 272 |
MS.gene50124.t1 | AT2G28040 | 40.284 | 422 | 200 | 14 | 16 | 433 | 18 | 391 | 1.08e-83 | 262 |
MS.gene50124.t1 | AT2G28040 | 41.775 | 383 | 197 | 11 | 54 | 433 | 23 | 382 | 1.82e-83 | 261 |
MS.gene50124.t1 | AT2G28030 | 42.149 | 363 | 185 | 7 | 74 | 433 | 48 | 388 | 2.03e-81 | 256 |
MS.gene50124.t1 | AT2G28220 | 37.585 | 439 | 220 | 12 | 3 | 433 | 6 | 398 | 1.57e-80 | 254 |
MS.gene50124.t1 | AT2G28225 | 40.489 | 368 | 188 | 9 | 74 | 433 | 54 | 398 | 1.59e-77 | 246 |
MS.gene50124.t1 | AT2G03200 | 36.806 | 432 | 236 | 13 | 26 | 434 | 43 | 460 | 1.89e-75 | 243 |
MS.gene50124.t1 | AT1G01300 | 38.997 | 359 | 194 | 13 | 85 | 432 | 140 | 484 | 2.83e-58 | 199 |
MS.gene50124.t1 | AT3G61820 | 38.228 | 395 | 208 | 16 | 55 | 432 | 108 | 483 | 2.29e-57 | 196 |
MS.gene50124.t1 | AT4G30030 | 36.066 | 366 | 206 | 14 | 79 | 432 | 70 | 419 | 3.34e-56 | 191 |
MS.gene50124.t1 | AT3G18490 | 35.955 | 356 | 205 | 13 | 85 | 432 | 160 | 500 | 5.69e-54 | 187 |
MS.gene50124.t1 | AT3G20015 | 31.390 | 446 | 247 | 17 | 20 | 432 | 51 | 470 | 1.62e-50 | 177 |
MS.gene50124.t1 | AT2G23945 | 28.540 | 459 | 277 | 16 | 9 | 434 | 10 | 450 | 1.97e-50 | 177 |
MS.gene50124.t1 | AT1G25510 | 35.493 | 355 | 205 | 13 | 85 | 432 | 146 | 483 | 3.94e-49 | 174 |
MS.gene50124.t1 | AT3G25700 | 31.455 | 426 | 245 | 18 | 39 | 432 | 39 | 449 | 7.93e-46 | 165 |
MS.gene50124.t1 | AT5G10770 | 34.819 | 359 | 210 | 12 | 85 | 433 | 130 | 474 | 7.40e-44 | 160 |
MS.gene50124.t1 | AT5G10760 | 33.985 | 409 | 232 | 15 | 31 | 432 | 87 | 464 | 8.35e-44 | 159 |
MS.gene50124.t1 | AT4G30040 | 31.435 | 439 | 250 | 20 | 14 | 427 | 15 | 427 | 9.70e-43 | 155 |
MS.gene50124.t1 | AT1G79720 | 36.074 | 377 | 181 | 19 | 87 | 432 | 135 | 482 | 2.74e-42 | 155 |
MS.gene50124.t1 | AT5G36260 | 31.117 | 376 | 219 | 16 | 85 | 435 | 76 | 436 | 1.33e-40 | 151 |
MS.gene50124.t1 | AT3G12700 | 30.447 | 358 | 236 | 8 | 87 | 433 | 106 | 461 | 1.64e-40 | 150 |
MS.gene50124.t1 | AT2G42980 | 32.990 | 388 | 221 | 15 | 74 | 432 | 147 | 524 | 2.45e-40 | 151 |
MS.gene50124.t1 | AT3G59080 | 31.865 | 386 | 226 | 14 | 74 | 432 | 157 | 532 | 2.60e-39 | 148 |
MS.gene50124.t1 | AT2G39710 | 31.300 | 377 | 203 | 16 | 89 | 427 | 67 | 425 | 3.67e-36 | 138 |
MS.gene50124.t1 | AT3G02740 | 29.365 | 378 | 231 | 14 | 76 | 433 | 79 | 440 | 5.69e-36 | 138 |
MS.gene50124.t1 | AT3G02740 | 29.155 | 367 | 229 | 13 | 87 | 433 | 10 | 365 | 8.59e-36 | 137 |
MS.gene50124.t1 | AT1G65240 | 28.763 | 372 | 226 | 15 | 85 | 433 | 72 | 427 | 7.21e-33 | 129 |
MS.gene50124.t1 | AT3G59080 | 29.396 | 381 | 206 | 13 | 74 | 432 | 157 | 496 | 4.99e-29 | 119 |
MS.gene50124.t1 | AT5G02190 | 26.862 | 376 | 221 | 15 | 96 | 432 | 82 | 442 | 1.04e-28 | 117 |
MS.gene50124.t1 | AT1G09750 | 30.130 | 385 | 225 | 16 | 73 | 432 | 83 | 448 | 1.28e-28 | 117 |
MS.gene50124.t1 | AT1G05840 | 28.382 | 377 | 231 | 13 | 85 | 435 | 78 | 441 | 1.90e-28 | 117 |
MS.gene50124.t1 | AT3G54400 | 29.156 | 391 | 237 | 15 | 62 | 433 | 56 | 425 | 4.87e-28 | 115 |
MS.gene50124.t1 | AT3G50050 | 26.164 | 451 | 280 | 18 | 12 | 434 | 13 | 438 | 6.02e-28 | 117 |
MS.gene50124.t1 | AT5G45120 | 27.805 | 410 | 224 | 18 | 84 | 432 | 80 | 478 | 9.78e-28 | 115 |
MS.gene50124.t1 | AT1G66180 | 26.005 | 373 | 235 | 14 | 88 | 435 | 73 | 429 | 8.78e-27 | 112 |
MS.gene50124.t1 | AT4G33490 | 26.161 | 409 | 236 | 17 | 63 | 432 | 30 | 411 | 8.89e-27 | 112 |
MS.gene50124.t1 | AT1G44130 | 25.750 | 400 | 244 | 15 | 67 | 434 | 23 | 401 | 2.06e-26 | 110 |
MS.gene50124.t1 | AT5G43100 | 26.431 | 367 | 230 | 13 | 85 | 433 | 74 | 418 | 5.09e-26 | 110 |
MS.gene50124.t1 | AT5G43100 | 26.431 | 367 | 230 | 13 | 85 | 433 | 74 | 418 | 8.30e-26 | 110 |
MS.gene50124.t1 | AT1G49050 | 26.478 | 389 | 237 | 18 | 80 | 434 | 197 | 570 | 1.71e-25 | 109 |
MS.gene50124.t1 | AT1G49050 | 25.967 | 362 | 222 | 15 | 105 | 434 | 50 | 397 | 1.77e-25 | 107 |
MS.gene50124.t1 | AT2G36670 | 27.128 | 376 | 236 | 15 | 85 | 435 | 98 | 460 | 2.35e-25 | 108 |
MS.gene50124.t1 | AT1G08210 | 28.226 | 372 | 232 | 13 | 85 | 433 | 82 | 441 | 2.99e-25 | 108 |
MS.gene50124.t1 | AT1G08210 | 28.226 | 372 | 232 | 13 | 85 | 433 | 116 | 475 | 3.44e-25 | 108 |
MS.gene50124.t1 | AT5G37540 | 26.415 | 371 | 234 | 13 | 88 | 432 | 81 | 438 | 4.09e-25 | 107 |
MS.gene50124.t1 | AT1G08210 | 28.108 | 370 | 235 | 13 | 85 | 433 | 130 | 489 | 4.10e-25 | 108 |
MS.gene50124.t1 | AT2G36670 | 27.005 | 374 | 235 | 15 | 87 | 435 | 34 | 394 | 4.77e-25 | 107 |
MS.gene50124.t1 | AT2G36670 | 27.005 | 374 | 235 | 15 | 87 | 435 | 34 | 394 | 4.77e-25 | 107 |
MS.gene50124.t1 | AT2G36670 | 27.151 | 372 | 237 | 14 | 87 | 435 | 105 | 465 | 5.34e-25 | 107 |
MS.gene50124.t1 | AT5G22850 | 29.521 | 376 | 229 | 16 | 85 | 435 | 79 | 443 | 8.67e-25 | 107 |
MS.gene50124.t1 | AT1G77480 | 26.190 | 378 | 230 | 17 | 85 | 434 | 65 | 421 | 1.01e-23 | 103 |
MS.gene50124.t1 | AT1G77480 | 26.190 | 378 | 230 | 17 | 85 | 434 | 65 | 421 | 1.58e-23 | 102 |
MS.gene50124.t1 | AT2G17760 | 27.972 | 429 | 248 | 22 | 32 | 432 | 54 | 449 | 2.32e-23 | 102 |
MS.gene50124.t1 | AT4G12920 | 26.893 | 383 | 243 | 15 | 61 | 432 | 31 | 387 | 2.49e-23 | 101 |
MS.gene50124.t1 | AT4G33490 | 29.934 | 304 | 170 | 13 | 63 | 349 | 27 | 304 | 3.17e-23 | 101 |
MS.gene50124.t1 | AT1G49050 | 27.899 | 276 | 173 | 12 | 80 | 343 | 197 | 458 | 1.46e-21 | 97.1 |
MS.gene50124.t1 | AT3G52500 | 28.389 | 391 | 228 | 17 | 85 | 433 | 88 | 468 | 1.61e-20 | 94.0 |
MS.gene50124.t1 | AT1G08210 | 26.316 | 399 | 232 | 14 | 85 | 433 | 82 | 468 | 2.85e-20 | 93.6 |
MS.gene50124.t1 | AT5G10080 | 24.738 | 477 | 276 | 22 | 11 | 434 | 9 | 455 | 5.17e-20 | 92.8 |
MS.gene50124.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 104 | 445 | 6.65e-20 | 92.4 |
MS.gene50124.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 94 | 435 | 7.53e-20 | 92.0 |
MS.gene50124.t1 | AT3G51360 | 28.297 | 364 | 216 | 15 | 92 | 432 | 10 | 351 | 1.07e-19 | 90.9 |
MS.gene50124.t1 | AT5G07030 | 25.586 | 469 | 284 | 18 | 2 | 433 | 15 | 455 | 2.55e-18 | 87.4 |
MS.gene50124.t1 | AT3G51350 | 25.336 | 446 | 270 | 19 | 27 | 432 | 30 | 452 | 3.86e-18 | 87.0 |
MS.gene50124.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 104 | 381 | 5.07e-18 | 86.3 |
MS.gene50124.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 94 | 371 | 5.27e-18 | 86.3 |
MS.gene50124.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 104 | 381 | 5.96e-18 | 85.9 |
MS.gene50124.t1 | AT3G51360 | 30.333 | 300 | 168 | 13 | 92 | 372 | 94 | 371 | 6.41e-18 | 85.9 |
MS.gene50124.t1 | AT3G51340 | 25.691 | 362 | 226 | 14 | 92 | 432 | 108 | 447 | 7.21e-17 | 83.2 |
MS.gene50124.t1 | AT4G35880 | 25.886 | 367 | 223 | 16 | 90 | 432 | 110 | 451 | 2.87e-16 | 81.3 |
MS.gene50124.t1 | AT3G51360 | 30.469 | 256 | 146 | 10 | 92 | 334 | 104 | 340 | 6.28e-15 | 76.3 |
MS.gene50124.t1 | AT3G25700 | 27.317 | 205 | 126 | 7 | 39 | 229 | 39 | 234 | 6.61e-15 | 76.3 |
MS.gene50124.t1 | AT3G51340 | 27.018 | 285 | 174 | 11 | 92 | 359 | 108 | 375 | 7.80e-15 | 76.3 |
MS.gene50124.t1 | AT3G51330 | 27.174 | 368 | 220 | 16 | 92 | 432 | 107 | 453 | 9.39e-15 | 76.3 |
MS.gene50124.t1 | AT3G51330 | 27.174 | 368 | 220 | 16 | 92 | 432 | 107 | 453 | 1.15e-14 | 76.3 |
MS.gene50124.t1 | AT3G51340 | 27.113 | 284 | 173 | 11 | 92 | 358 | 108 | 374 | 1.24e-14 | 75.5 |
MS.gene50124.t1 | AT3G51340 | 24.397 | 373 | 229 | 14 | 92 | 432 | 108 | 459 | 2.21e-14 | 75.5 |
MS.gene50124.t1 | AT3G42550 | 36.538 | 104 | 64 | 1 | 87 | 188 | 78 | 181 | 1.65e-13 | 72.4 |
MS.gene50124.t1 | AT4G35880 | 25.914 | 301 | 186 | 13 | 90 | 372 | 110 | 391 | 2.19e-13 | 72.0 |
MS.gene50124.t1 | AT3G51330 | 28.477 | 302 | 179 | 13 | 92 | 373 | 107 | 391 | 1.15e-12 | 70.1 |
Find 96 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTTGTAGTATGGTGATTT+TGG | 0.123043 | 5.4:-63313773 | None:intergenic |
TCGTGCCAATCATTTCTTTA+AGG | 0.171874 | 5.4:+63313847 | MS.gene50124:CDS |
GCTCGACTTGGTTCCATCTT+TGG | 0.197171 | 5.4:+63314859 | MS.gene50124:CDS |
GGAGATGCCGCTGTGGTTTC+GGG | 0.226097 | 5.4:+63314436 | MS.gene50124:CDS |
TTAAAATGTGCGGTGATTAT+AGG | 0.227453 | 5.4:-63314751 | None:intergenic |
CTCGACTTGGTTCCATCTTT+GGG | 0.248725 | 5.4:+63314860 | MS.gene50124:CDS |
TGGAGATGCCGCTGTGGTTT+CGG | 0.272220 | 5.4:+63314435 | MS.gene50124:CDS |
GGAAACAAAAGAGTAGAATT+TGG | 0.282532 | 5.4:+63314538 | MS.gene50124:CDS |
ATGACATAACCACCCCTATC+AGG | 0.317982 | 5.4:-63313905 | None:intergenic |
TCATTTCCTAAAACAGTGAT+AGG | 0.331434 | 5.4:+63314238 | MS.gene50124:CDS |
GCAACAAGTATACTCAGTTT+TGG | 0.331436 | 5.4:+63314415 | MS.gene50124:CDS |
TGGTTCCATCTTTGGGAACT+TGG | 0.335588 | 5.4:+63314867 | MS.gene50124:CDS |
TCAGGGATTACAGTTGATTC+AGG | 0.336604 | 5.4:-63313887 | None:intergenic |
CATAGGCCGAATTGTTGATT+AGG | 0.338419 | 5.4:-63314697 | None:intergenic |
GAAATGATTGGCACGATTGA+TGG | 0.352741 | 5.4:-63313840 | None:intergenic |
GGTAACATCATAATTGATTC+AGG | 0.364855 | 5.4:+63314586 | MS.gene50124:CDS |
AATCAACTGTAATCCCTGAT+AGG | 0.365381 | 5.4:+63313891 | MS.gene50124:CDS |
TGTCAATATAAAATTAGTTA+TGG | 0.366380 | 5.4:+63314142 | MS.gene50124:CDS |
ACTGATAATGCGGGGACGTT+TGG | 0.369941 | 5.4:+63314268 | MS.gene50124:CDS |
ATACAGGTAGTGACATTGTT+TGG | 0.380232 | 5.4:+63313975 | MS.gene50124:CDS |
GGAATCAGCTGTGGCGGATT+CGG | 0.381615 | 5.4:+63314651 | MS.gene50124:CDS |
ACCCCTCCAACTAAGATATA+CGG | 0.395309 | 5.4:+63313944 | MS.gene50124:CDS |
GGTGTCTCTCATAACACAAT+TGG | 0.397228 | 5.4:+63314330 | MS.gene50124:CDS |
GCAATACCGTATATCTTAGT+TGG | 0.401415 | 5.4:-63313950 | None:intergenic |
TTGAGCCAAGTTCCCAAAGA+TGG | 0.402500 | 5.4:-63314872 | None:intergenic |
CTTGGCTCAACAAAATTTGT+TGG | 0.415034 | 5.4:+63314885 | MS.gene50124:CDS |
CTTCAACACTCGTTACGCTT+TGG | 0.416239 | 5.4:-63314959 | None:intergenic |
GTATAGTTGGCCTTGGAGGC+GGG | 0.418166 | 5.4:+63314305 | MS.gene50124:CDS |
AAAGAAAGAAAGAGTAAGAA+GGG | 0.419999 | 5.4:-63313675 | None:intergenic |
CAAACAATACCCTCAGCAAT+TGG | 0.420182 | 5.4:-63314814 | None:intergenic |
AGGAAATGAAACAGGACTTC+CGG | 0.422734 | 5.4:-63314224 | None:intergenic |
TGGTAAATTCTCTTATTGTT+TGG | 0.432097 | 5.4:+63314366 | MS.gene50124:CDS |
CAACCATCATCTGCTCGACT+TGG | 0.440590 | 5.4:+63314847 | MS.gene50124:CDS |
AAAAGAAAGAAAGAGTAAGA+AGG | 0.440746 | 5.4:-63313676 | None:intergenic |
AGCTCTGGTATAGTTGGCCT+TGG | 0.443123 | 5.4:+63314298 | MS.gene50124:CDS |
GGTATAGTTGGCCTTGGAGG+CGG | 0.452029 | 5.4:+63314304 | MS.gene50124:CDS |
TTCTTTAAGGATTCTGACTC+AGG | 0.452767 | 5.4:+63313860 | MS.gene50124:CDS |
ACGTTTGGAGGCGCAAGCTC+TGG | 0.453545 | 5.4:+63314283 | MS.gene50124:CDS |
GATGATCCTAATCAACAATT+CGG | 0.454884 | 5.4:+63314691 | MS.gene50124:CDS |
GCCGCTGTGGTTTCGGGTGA+CGG | 0.464493 | 5.4:+63314442 | MS.gene50124:CDS |
GCTCAACAAAATTTGTTGGT+TGG | 0.464745 | 5.4:+63314889 | MS.gene50124:CDS |
ACACAATTGGGATCATCAAT+TGG | 0.466095 | 5.4:+63314343 | MS.gene50124:CDS |
GATAATGCGGGGACGTTTGG+AGG | 0.471225 | 5.4:+63314271 | MS.gene50124:CDS |
AGAATCCTTAAAGAAATGAT+TGG | 0.474578 | 5.4:-63313852 | None:intergenic |
AAAAGAAGCAATGAAACAAA+GGG | 0.475787 | 5.4:-63313699 | None:intergenic |
CTTGCATTGGAGTCCACCTC+CGG | 0.477636 | 5.4:+63314205 | MS.gene50124:CDS |
TCTGGTATAGTTGGCCTTGG+AGG | 0.477995 | 5.4:+63314301 | MS.gene50124:CDS |
AGTTGGCCTTGGAGGCGGGC+CGG | 0.481112 | 5.4:+63314309 | MS.gene50124:CDS |
ACATTAGAAGCATTTAGTGT+TGG | 0.483347 | 5.4:+63314517 | MS.gene50124:CDS |
ACCTTTGTTCCAATTGCTGA+GGG | 0.486978 | 5.4:+63314805 | MS.gene50124:CDS |
ATCCGACGTCTATACTAACT+TGG | 0.497477 | 5.4:+63314630 | MS.gene50124:CDS |
TAGTGTTGACACTCTTGCAT+TGG | 0.507261 | 5.4:+63314192 | MS.gene50124:CDS |
CCTAAAACAGTGATAGGATG+TGG | 0.509378 | 5.4:+63314244 | MS.gene50124:CDS |
TCTTCAGAAGGTGGTGATGA+AGG | 0.515904 | 5.4:+63314565 | MS.gene50124:CDS |
ATCAACTGTAATCCCTGATA+GGG | 0.516703 | 5.4:+63313892 | MS.gene50124:CDS |
GGCGCAAGCTCTGGTATAGT+TGG | 0.524413 | 5.4:+63314292 | MS.gene50124:CDS |
GTGTCTCTCATAACACAATT+GGG | 0.525876 | 5.4:+63314331 | MS.gene50124:CDS |
GAGACACCGGCCCGCCTCCA+AGG | 0.526730 | 5.4:-63314315 | None:intergenic |
ATATACGGTATTGCTGATAC+AGG | 0.526965 | 5.4:+63313959 | MS.gene50124:CDS |
TACCTTTGTTCCAATTGCTG+AGG | 0.535011 | 5.4:+63314804 | MS.gene50124:CDS |
GGATGTGGAACTGATAATGC+GGG | 0.535589 | 5.4:+63314259 | MS.gene50124:CDS |
TACCGTATATCTTAGTTGGA+GGG | 0.552333 | 5.4:-63313946 | None:intergenic |
TGAAACAGGACTTCCGGAGG+TGG | 0.556306 | 5.4:-63314218 | None:intergenic |
GAACCAAGTCGAGCAGATGA+TGG | 0.559364 | 5.4:-63314850 | None:intergenic |
CAAGTCGAGCAGATGATGGT+TGG | 0.560415 | 5.4:-63314846 | None:intergenic |
GAATTTGGAGGCTCTTCAGA+AGG | 0.562761 | 5.4:+63314553 | MS.gene50124:CDS |
GTTTGACTCCTTGTTCAACA+AGG | 0.566764 | 5.4:-63314392 | None:intergenic |
ATACCGTATATCTTAGTTGG+AGG | 0.568782 | 5.4:-63313947 | None:intergenic |
ACCGTATATCTTAGTTGGAG+GGG | 0.570548 | 5.4:-63313945 | None:intergenic |
TGACATAACCACCCCTATCA+GGG | 0.581426 | 5.4:-63313904 | None:intergenic |
AACAAAAGAGTAGAATTTGG+AGG | 0.583454 | 5.4:+63314541 | MS.gene50124:CDS |
TGGTTGTAACATTGTTCACA+AGG | 0.591014 | 5.4:-63314010 | None:intergenic |
TTTGGTGCCCTTGTTGAACA+AGG | 0.591411 | 5.4:+63314384 | MS.gene50124:CDS |
TACGCTTTGGTACAATCAGT+AGG | 0.595820 | 5.4:-63314946 | None:intergenic |
ACCCTCAGCAATTGGAACAA+AGG | 0.601197 | 5.4:-63314806 | None:intergenic |
AAGTTAGTATAGACGTCGGA+TGG | 0.605014 | 5.4:-63314628 | None:intergenic |
TTTGACTCCTTGTTCAACAA+GGG | 0.608133 | 5.4:-63314391 | None:intergenic |
TTGATGTCAAACTATAGCAT+AGG | 0.608908 | 5.4:-63314714 | None:intergenic |
TTTGGAGGCTCTTCAGAAGG+TGG | 0.613424 | 5.4:+63314556 | MS.gene50124:CDS |
TACTAACTTGGAATCAGCTG+TGG | 0.614064 | 5.4:+63314642 | MS.gene50124:CDS |
TAACTTGGAATCAGCTGTGG+CGG | 0.614924 | 5.4:+63314645 | MS.gene50124:CDS |
TATGTCATGACGTATTCAGT+TGG | 0.616181 | 5.4:+63313920 | MS.gene50124:CDS |
ATCGGCACCTTTAAAATGTG+CGG | 0.635428 | 5.4:-63314761 | None:intergenic |
AATAGAATGCAACTCAACAT+CGG | 0.645414 | 5.4:-63314779 | None:intergenic |
AATTGTGTTATGAGAGACAC+CGG | 0.647126 | 5.4:-63314328 | None:intergenic |
GTGCTGCATCGACAAAGTGT+TGG | 0.649567 | 5.4:-63313811 | None:intergenic |
CAATTGGGATCATCAATTGG+TGG | 0.657590 | 5.4:+63314346 | MS.gene50124:CDS |
TCAACTGTAATCCCTGATAG+GGG | 0.660378 | 5.4:+63313893 | MS.gene50124:CDS |
TGACATAGCTTAGACGCACA+AGG | 0.661062 | 5.4:-63314082 | None:intergenic |
ACTGTAATCCCTGATAGGGG+TGG | 0.665786 | 5.4:+63313896 | MS.gene50124:CDS |
AGGATGTGGAACTGATAATG+CGG | 0.682839 | 5.4:+63314258 | MS.gene50124:CDS |
GGAGATTATTCACATTCACG+AGG | 0.685076 | 5.4:+63314163 | MS.gene50124:CDS |
TTCCAAGTTAGTATAGACGT+CGG | 0.706462 | 5.4:-63314632 | None:intergenic |
AAATGAAACAGGACTTCCGG+AGG | 0.727776 | 5.4:-63314221 | None:intergenic |
GATGTGGAACTGATAATGCG+GGG | 0.729209 | 5.4:+63314260 | MS.gene50124:CDS |
ACCGTCACCCGAAACCACAG+CGG | 0.745897 | 5.4:-63314443 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTCAATATAAAATTAGTTA+TGG | + | chr5.4:63314142-63314161 | MS.gene50124:CDS | 15.0% |
!!! | TTTTATATTGACAAGAATTT+TGG | - | chr5.4:63314135-63314154 | None:intergenic | 15.0% |
!!! | GATTTTGATGGATTAAAAAT+GGG | - | chr5.4:63314043-63314062 | None:intergenic | 20.0% |
!!! | TGATTTTGATGGATTAAAAA+TGG | - | chr5.4:63314044-63314063 | None:intergenic | 20.0% |
! | AAAAAGAAGCAATGAAACAA+AGG | - | chr5.4:63313703-63313722 | None:intergenic | 25.0% |
! | AAAAGAAAGAAAGAGTAAGA+AGG | - | chr5.4:63313679-63313698 | None:intergenic | 25.0% |
! | AAAAGAAGCAATGAAACAAA+GGG | - | chr5.4:63313702-63313721 | None:intergenic | 25.0% |
! | AAAGAAAGAAAGAGTAAGAA+GGG | - | chr5.4:63313678-63313697 | None:intergenic | 25.0% |
! | AATGTCAAAAAGTAGAAAAC+TGG | - | chr5.4:63314502-63314521 | None:intergenic | 25.0% |
! | AGAATCCTTAAAGAAATGAT+TGG | - | chr5.4:63313855-63313874 | None:intergenic | 25.0% |
! | TGGTAAATTCTCTTATTGTT+TGG | + | chr5.4:63314366-63314385 | MS.gene50124:CDS | 25.0% |
!! | TTGTAACTAGATGATTTTGA+TGG | - | chr5.4:63314055-63314074 | None:intergenic | 25.0% |
!!! | TGTTGGTATTTATTTTCAGT+AGG | - | chr5.4:63313797-63313816 | None:intergenic | 25.0% |
AACAAAAGAGTAGAATTTGG+AGG | + | chr5.4:63314541-63314560 | MS.gene50124:CDS | 30.0% | |
AATAGAATGCAACTCAACAT+CGG | - | chr5.4:63314782-63314801 | None:intergenic | 30.0% | |
GATGATCCTAATCAACAATT+CGG | + | chr5.4:63314691-63314710 | MS.gene50124:CDS | 30.0% | |
GGAAACAAAAGAGTAGAATT+TGG | + | chr5.4:63314538-63314557 | MS.gene50124:CDS | 30.0% | |
TCATTTCCTAAAACAGTGAT+AGG | + | chr5.4:63314238-63314257 | MS.gene50124:CDS | 30.0% | |
TTAAAATGTGCGGTGATTAT+AGG | - | chr5.4:63314754-63314773 | None:intergenic | 30.0% | |
TTGATGTCAAACTATAGCAT+AGG | - | chr5.4:63314717-63314736 | None:intergenic | 30.0% | |
! | ATAATCACCGCACATTTTAA+AGG | + | chr5.4:63314754-63314773 | MS.gene50124:CDS | 30.0% |
! | GGTAACATCATAATTGATTC+AGG | + | chr5.4:63314586-63314605 | MS.gene50124:CDS | 30.0% |
! | GTTTGTAGTATGGTGATTTT+GGG | - | chr5.4:63313775-63313794 | None:intergenic | 30.0% |
! | TTTGTAGTATGGTGATTTTG+GGG | - | chr5.4:63313774-63313793 | None:intergenic | 30.0% |
! | TTTTCAGTAGGTTTGTAGTA+TGG | - | chr5.4:63313785-63313804 | None:intergenic | 30.0% |
!! | ACATTAGAAGCATTTAGTGT+TGG | + | chr5.4:63314517-63314536 | MS.gene50124:CDS | 30.0% |
!!! | ACTGTTTTAGGAAATGAAAC+AGG | - | chr5.4:63314235-63314254 | None:intergenic | 30.0% |
AATCAACTGTAATCCCTGAT+AGG | + | chr5.4:63313891-63313910 | MS.gene50124:CDS | 35.0% | |
AATTGTGTTATGAGAGACAC+CGG | - | chr5.4:63314331-63314350 | None:intergenic | 35.0% | |
ACACAATTGGGATCATCAAT+TGG | + | chr5.4:63314343-63314362 | MS.gene50124:CDS | 35.0% | |
ATACAGGTAGTGACATTGTT+TGG | + | chr5.4:63313975-63313994 | MS.gene50124:CDS | 35.0% | |
ATACCGTATATCTTAGTTGG+AGG | - | chr5.4:63313950-63313969 | None:intergenic | 35.0% | |
ATATACGGTATTGCTGATAC+AGG | + | chr5.4:63313959-63313978 | MS.gene50124:CDS | 35.0% | |
ATCAACTGTAATCCCTGATA+GGG | + | chr5.4:63313892-63313911 | MS.gene50124:CDS | 35.0% | |
CTTGGCTCAACAAAATTTGT+TGG | + | chr5.4:63314885-63314904 | MS.gene50124:CDS | 35.0% | |
GATTAAAAATGGGAGTGGTT+TGG | - | chr5.4:63314033-63314052 | None:intergenic | 35.0% | |
GCAATACCGTATATCTTAGT+TGG | - | chr5.4:63313953-63313972 | None:intergenic | 35.0% | |
GTGTCTCTCATAACACAATT+GGG | + | chr5.4:63314331-63314350 | MS.gene50124:CDS | 35.0% | |
TACCGTATATCTTAGTTGGA+GGG | - | chr5.4:63313949-63313968 | None:intergenic | 35.0% | |
TATGTCATGACGTATTCAGT+TGG | + | chr5.4:63313920-63313939 | MS.gene50124:CDS | 35.0% | |
TCGTGCCAATCATTTCTTTA+AGG | + | chr5.4:63313847-63313866 | MS.gene50124:CDS | 35.0% | |
TGGTTGTAACATTGTTCACA+AGG | - | chr5.4:63314013-63314032 | None:intergenic | 35.0% | |
TTCCAAGTTAGTATAGACGT+CGG | - | chr5.4:63314635-63314654 | None:intergenic | 35.0% | |
TTTGACTCCTTGTTCAACAA+GGG | - | chr5.4:63314394-63314413 | None:intergenic | 35.0% | |
! | GCAACAAGTATACTCAGTTT+TGG | + | chr5.4:63314415-63314434 | MS.gene50124:CDS | 35.0% |
! | GGTTTGTAGTATGGTGATTT+TGG | - | chr5.4:63313776-63313795 | None:intergenic | 35.0% |
! | TTCTTTAAGGATTCTGACTC+AGG | + | chr5.4:63313860-63313879 | MS.gene50124:CDS | 35.0% |
! | TTTTCTCATGCACTAAGCAA+TGG | + | chr5.4:63313719-63313738 | MS.gene50124:CDS | 35.0% |
!! | GCTCAACAAAATTTGTTGGT+TGG | + | chr5.4:63314889-63314908 | MS.gene50124:CDS | 35.0% |
!! | TGATGGATTAAAAATGGGAG+TGG | - | chr5.4:63314038-63314057 | None:intergenic | 35.0% |
!!! | GGAGAGTCTTTTTTTACTAG+AGG | - | chr5.4:63314481-63314500 | None:intergenic | 35.0% |
AAGTTAGTATAGACGTCGGA+TGG | - | chr5.4:63314631-63314650 | None:intergenic | 40.0% | |
ACCCCTCCAACTAAGATATA+CGG | + | chr5.4:63313944-63313963 | MS.gene50124:CDS | 40.0% | |
ACCGTATATCTTAGTTGGAG+GGG | - | chr5.4:63313948-63313967 | None:intergenic | 40.0% | |
ACCTTTGTTCCAATTGCTGA+GGG | + | chr5.4:63314805-63314824 | MS.gene50124:CDS | 40.0% | |
AGGAAATGAAACAGGACTTC+CGG | - | chr5.4:63314227-63314246 | None:intergenic | 40.0% | |
ATCCGACGTCTATACTAACT+TGG | + | chr5.4:63314630-63314649 | MS.gene50124:CDS | 40.0% | |
CAAACAATACCCTCAGCAAT+TGG | - | chr5.4:63314817-63314836 | None:intergenic | 40.0% | |
CAATTGGGATCATCAATTGG+TGG | + | chr5.4:63314346-63314365 | MS.gene50124:CDS | 40.0% | |
CCTAAAACAGTGATAGGATG+TGG | + | chr5.4:63314244-63314263 | MS.gene50124:CDS | 40.0% | |
GAAATGATTGGCACGATTGA+TGG | - | chr5.4:63313843-63313862 | None:intergenic | 40.0% | |
GGAGATTATTCACATTCACG+AGG | + | chr5.4:63314163-63314182 | MS.gene50124:CDS | 40.0% | |
GGTGTCTCTCATAACACAAT+TGG | + | chr5.4:63314330-63314349 | MS.gene50124:CDS | 40.0% | |
GTTTGACTCCTTGTTCAACA+AGG | - | chr5.4:63314395-63314414 | None:intergenic | 40.0% | |
TACCTTTGTTCCAATTGCTG+AGG | + | chr5.4:63314804-63314823 | MS.gene50124:CDS | 40.0% | |
TACGCTTTGGTACAATCAGT+AGG | - | chr5.4:63314949-63314968 | None:intergenic | 40.0% | |
TACTAACTTGGAATCAGCTG+TGG | + | chr5.4:63314642-63314661 | MS.gene50124:CDS | 40.0% | |
TCAACTGTAATCCCTGATAG+GGG | + | chr5.4:63313893-63313912 | MS.gene50124:CDS | 40.0% | |
! | AGGATGTGGAACTGATAATG+CGG | + | chr5.4:63314258-63314277 | MS.gene50124:CDS | 40.0% |
! | CATAGGCCGAATTGTTGATT+AGG | - | chr5.4:63314700-63314719 | None:intergenic | 40.0% |
! | CCACATCCTATCACTGTTTT+AGG | - | chr5.4:63314247-63314266 | None:intergenic | 40.0% |
! | TCAGGGATTACAGTTGATTC+AGG | - | chr5.4:63313890-63313909 | None:intergenic | 40.0% |
!! | AGAATTTTGGTCACTGCAAG+AGG | - | chr5.4:63314122-63314141 | None:intergenic | 40.0% |
!! | ATCGGCACCTTTAAAATGTG+CGG | - | chr5.4:63314764-63314783 | None:intergenic | 40.0% |
!! | TAGTGTTGACACTCTTGCAT+TGG | + | chr5.4:63314192-63314211 | MS.gene50124:CDS | 40.0% |
AAATGAAACAGGACTTCCGG+AGG | - | chr5.4:63314224-63314243 | None:intergenic | 45.0% | |
ACCCTCAGCAATTGGAACAA+AGG | - | chr5.4:63314809-63314828 | None:intergenic | 45.0% | |
ATGACATAACCACCCCTATC+AGG | - | chr5.4:63313908-63313927 | None:intergenic | 45.0% | |
GAATTTGGAGGCTCTTCAGA+AGG | + | chr5.4:63314553-63314572 | MS.gene50124:CDS | 45.0% | |
TAACTTGGAATCAGCTGTGG+CGG | + | chr5.4:63314645-63314664 | MS.gene50124:CDS | 45.0% | |
TGACATAACCACCCCTATCA+GGG | - | chr5.4:63313907-63313926 | None:intergenic | 45.0% | |
TGACATAGCTTAGACGCACA+AGG | - | chr5.4:63314085-63314104 | None:intergenic | 45.0% | |
TTGAGCCAAGTTCCCAAAGA+TGG | - | chr5.4:63314875-63314894 | None:intergenic | 45.0% | |
! | GATGTGGAACTGATAATGCG+GGG | + | chr5.4:63314260-63314279 | MS.gene50124:CDS | 45.0% |
! | GGATGTGGAACTGATAATGC+GGG | + | chr5.4:63314259-63314278 | MS.gene50124:CDS | 45.0% |
! | TCTTCAGAAGGTGGTGATGA+AGG | + | chr5.4:63314565-63314584 | MS.gene50124:CDS | 45.0% |
! | TGGTTCCATCTTTGGGAACT+TGG | + | chr5.4:63314867-63314886 | MS.gene50124:CDS | 45.0% |
!! | ATGGTGATTTTGGGGAGTCA+CGG | - | chr5.4:63313766-63313785 | None:intergenic | 45.0% |
!! | CTCGACTTGGTTCCATCTTT+GGG | + | chr5.4:63314860-63314879 | MS.gene50124:CDS | 45.0% |
!! | TTTGGTGCCCTTGTTGAACA+AGG | + | chr5.4:63314384-63314403 | MS.gene50124:CDS | 45.0% |
ACTGTAATCCCTGATAGGGG+TGG | + | chr5.4:63313896-63313915 | MS.gene50124:CDS | 50.0% | |
CAACCATCATCTGCTCGACT+TGG | + | chr5.4:63314847-63314866 | MS.gene50124:CDS | 50.0% | |
GAACCAAGTCGAGCAGATGA+TGG | - | chr5.4:63314853-63314872 | None:intergenic | 50.0% | |
TTTGGAGGCTCTTCAGAAGG+TGG | + | chr5.4:63314556-63314575 | MS.gene50124:CDS | 50.0% | |
! | ACTGATAATGCGGGGACGTT+TGG | + | chr5.4:63314268-63314287 | MS.gene50124:CDS | 50.0% |
! | AGCTCTGGTATAGTTGGCCT+TGG | + | chr5.4:63314298-63314317 | MS.gene50124:CDS | 50.0% |
! | CAAGTCGAGCAGATGATGGT+TGG | - | chr5.4:63314849-63314868 | None:intergenic | 50.0% |
! | GTGCTGCATCGACAAAGTGT+TGG | - | chr5.4:63313814-63313833 | None:intergenic | 50.0% |
!! | GCTCGACTTGGTTCCATCTT+TGG | + | chr5.4:63314859-63314878 | MS.gene50124:CDS | 50.0% |
!! | TCTGGTATAGTTGGCCTTGG+AGG | + | chr5.4:63314301-63314320 | MS.gene50124:CDS | 50.0% |
CTTGCATTGGAGTCCACCTC+CGG | + | chr5.4:63314205-63314224 | MS.gene50124:CDS | 55.0% | |
GATAATGCGGGGACGTTTGG+AGG | + | chr5.4:63314271-63314290 | MS.gene50124:CDS | 55.0% | |
TGAAACAGGACTTCCGGAGG+TGG | - | chr5.4:63314221-63314240 | None:intergenic | 55.0% | |
TGGAGATGCCGCTGTGGTTT+CGG | + | chr5.4:63314435-63314454 | MS.gene50124:CDS | 55.0% | |
! | GGCGCAAGCTCTGGTATAGT+TGG | + | chr5.4:63314292-63314311 | MS.gene50124:CDS | 55.0% |
!! | GGAATCAGCTGTGGCGGATT+CGG | + | chr5.4:63314651-63314670 | MS.gene50124:CDS | 55.0% |
!! | GGTATAGTTGGCCTTGGAGG+CGG | + | chr5.4:63314304-63314323 | MS.gene50124:CDS | 55.0% |
!! | GTATAGTTGGCCTTGGAGGC+GGG | + | chr5.4:63314305-63314324 | MS.gene50124:CDS | 55.0% |
!! | GTGATTTTGGGGAGTCACGG+TGG | - | chr5.4:63313763-63313782 | None:intergenic | 55.0% |
!!! | CAGTTTTGGAGATGCCGCTG+TGG | + | chr5.4:63314429-63314448 | MS.gene50124:CDS | 55.0% |
ACCGTCACCCGAAACCACAG+CGG | - | chr5.4:63314446-63314465 | None:intergenic | 60.0% | |
GGAGATGCCGCTGTGGTTTC+GGG | + | chr5.4:63314436-63314455 | MS.gene50124:CDS | 60.0% | |
! | ACGTTTGGAGGCGCAAGCTC+TGG | + | chr5.4:63314283-63314302 | MS.gene50124:CDS | 60.0% |
! | GCCGCTGTGGTTTCGGGTGA+CGG | + | chr5.4:63314442-63314461 | MS.gene50124:CDS | 65.0% |
!! | AGTTGGCCTTGGAGGCGGGC+CGG | + | chr5.4:63314309-63314328 | MS.gene50124:CDS | 70.0% |
GAGACACCGGCCCGCCTCCA+AGG | - | chr5.4:63314318-63314337 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 63313662 | 63314969 | 63313662 | ID=MS.gene50124 |
chr5.4 | mRNA | 63313662 | 63314969 | 63313662 | ID=MS.gene50124.t1;Parent=MS.gene50124 |
chr5.4 | exon | 63313662 | 63314969 | 63313662 | ID=MS.gene50124.t1.exon1;Parent=MS.gene50124.t1 |
chr5.4 | CDS | 63313662 | 63314969 | 63313662 | ID=cds.MS.gene50124.t1;Parent=MS.gene50124.t1 |
Gene Sequence |
Protein sequence |