AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50476

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50476.t1 MTR_7g094810 97.496 639 16 0 1 639 1 639 0.0 1292
MS.gene50476.t1 MTR_7g094810 96.890 643 16 1 1 639 1 643 0.0 1286
MS.gene50476.t1 MTR_7g094810 97.653 554 13 0 1 554 1 554 0.0 1123
MS.gene50476.t1 MTR_7g094810 96.953 558 13 1 1 554 1 558 0.0 1118
MS.gene50476.t1 MTR_7g094810 97.419 465 12 0 1 465 1 465 0.0 942
MS.gene50476.t1 MTR_1g072280 68.413 630 197 2 9 638 13 640 0.0 875
MS.gene50476.t1 MTR_1g082870 57.571 634 268 1 6 639 14 646 0.0 781
MS.gene50476.t1 MTR_5g034580 52.215 632 281 5 7 637 9 620 0.0 672
MS.gene50476.t1 MTR_5g040690 51.974 608 289 2 6 613 15 619 0.0 659
MS.gene50476.t1 MTR_4g129890 47.937 630 319 4 7 630 18 644 0.0 607
MS.gene50476.t1 MTR_5g034140 52.838 458 211 2 165 622 13 465 6.34e-170 495
MS.gene50476.t1 MTR_4g129310 44.260 601 284 4 17 585 29 610 6.90e-165 485
MS.gene50476.t1 MTR_5g034660 45.697 337 155 1 303 639 12 320 2.31e-93 291
MS.gene50476.t1 MTR_4g123543 44.253 174 71 4 480 629 4 175 4.15e-41 147
MS.gene50476.t1 MTR_8g010670 35.117 299 156 8 8 287 33 312 1.31e-39 152
MS.gene50476.t1 MTR_4g073250 29.143 175 114 3 9 174 7 180 3.13e-14 72.0
MS.gene50476.t1 MTR_3g078260 28.959 221 127 6 1 205 1 207 1.29e-13 70.9
MS.gene50476.t1 MTR_8g075240 28.652 178 107 3 9 172 7 178 2.89e-13 69.3
MS.gene50476.t1 MTR_5g022600 28.652 178 107 3 9 172 7 178 3.33e-13 69.3
MS.gene50476.t1 MTR_2g090875 28.324 173 114 3 9 172 7 178 5.95e-13 68.6
MS.gene50476.t1 MTR_4g088055 27.746 173 115 3 9 172 7 178 1.70e-12 67.0
MS.gene50476.t1 MTR_6g087980 28.000 175 116 3 9 174 7 180 5.88e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50476.t1 AT3G63150 59.494 632 256 0 6 637 12 643 0.0 803
MS.gene50476.t1 AT5G27540 57.188 633 269 2 8 639 17 648 0.0 738
MS.gene50476.t1 AT5G27540 57.188 633 269 2 8 639 17 648 0.0 738
MS.gene50476.t1 AT3G05310 47.253 637 325 6 9 637 15 648 0.0 597
MS.gene50476.t1 AT3G05310 48.419 506 250 6 140 637 1 503 3.66e-167 487
MS.gene50476.t1 AT3G05310 48.871 487 237 7 140 615 1 486 1.23e-158 465
MS.gene50476.t1 AT4G35020 30.286 175 112 3 9 174 7 180 4.82e-15 74.7
MS.gene50476.t1 AT4G35020 30.286 175 112 3 9 174 7 180 4.82e-15 74.7
MS.gene50476.t1 AT4G35020 30.286 175 112 3 9 174 7 180 4.82e-15 74.7
MS.gene50476.t1 AT1G20090 29.480 173 112 3 9 172 6 177 8.02e-14 70.9
MS.gene50476.t1 AT4G28950 28.324 173 116 3 9 174 7 178 2.52e-13 70.1
MS.gene50476.t1 AT2G44690 29.143 175 114 3 9 174 19 192 6.21e-13 68.9
MS.gene50476.t1 AT3G51300 29.213 178 106 3 9 172 7 178 6.99e-13 68.2
MS.gene50476.t1 AT1G75840 28.902 173 113 3 9 172 7 178 8.06e-13 68.2
MS.gene50476.t1 AT2G17800 28.090 178 108 3 9 172 7 178 1.23e-12 67.8
MS.gene50476.t1 AT2G17800 28.090 178 108 3 9 172 7 178 1.23e-12 67.8
MS.gene50476.t1 AT4G35950 27.528 178 109 3 9 172 7 178 1.76e-12 67.0
MS.gene50476.t1 AT3G48040 27.128 188 117 3 1 174 1 182 2.92e-12 66.6
MS.gene50476.t1 AT5G62880 26.630 184 125 3 1 175 1 183 3.33e-12 66.6
MS.gene50476.t1 AT5G45970 25.862 174 119 3 9 173 7 179 1.21e-11 64.7

Find 142 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCCCAATCTCAGTTTC+TGG 0.127977 7.3:+16264681 None:intergenic
TACAAGTTCACACACCTTTC+TGG 0.158890 7.3:+16270076 None:intergenic
TGCTCTGTTGGATGCATTAT+TGG 0.173185 7.3:-16267179 MS.gene50476:CDS
GCAAATGCCATTGAATTAAT+AGG 0.209265 7.3:-16266970 MS.gene50476:CDS
AAGGGAATCCGGAGACATTT+TGG 0.211616 7.3:-16271141 MS.gene50476:CDS
AAATGGCATCTTTAGACTAT+TGG 0.212196 7.3:-16270295 MS.gene50476:CDS
TCTGTCAAATCAGGATTATT+TGG 0.225912 7.3:-16266691 MS.gene50476:CDS
ATCAAAATTTCTGTCAAATC+AGG 0.290043 7.3:-16266700 MS.gene50476:CDS
TCTTGCACTGCCCTTGGATA+TGG 0.301508 7.3:+16264936 None:intergenic
CTTCGCGATTGAGTTCTTAC+TGG 0.317289 7.3:-16272986 MS.gene50476:CDS
ATCATTAGTACATACTTTAT+CGG 0.318841 7.3:+16270269 None:intergenic
CAAATGCCATTGAATTAATA+GGG 0.324246 7.3:-16266969 MS.gene50476:CDS
CTCTCAGTAACGTCGTTATA+TGG 0.324926 7.3:+16267507 None:intergenic
CAACATTCTTGAACTCTTGT+AGG 0.325048 7.3:+16272118 None:intergenic
AATTTCATGCTTACGTGAAT+AGG 0.325868 7.3:+16264768 None:intergenic
CTTTAACAGATAAATGTGTT+AGG 0.335032 7.3:-16271499 MS.gene50476:CDS
TGATCAAACAATGGCTCTAC+TGG 0.345468 7.3:+16271533 None:intergenic
TACGGTAATGGGAACATAAT+CGG 0.355153 7.3:+16273369 None:intergenic
TTGCAACCAACCACAATTAC+AGG 0.361345 7.3:+16272198 None:intergenic
CTAGGAAAACTCTTGTATTA+CGG 0.370007 7.3:-16266743 MS.gene50476:CDS
ATTCACGTAAGCATGAAATT+AGG 0.372157 7.3:-16264765 MS.gene50476:CDS
GCTCTGTTGGATGCATTATT+GGG 0.374557 7.3:-16267178 MS.gene50476:CDS
CATAACATGTTCTTAAGAAA+AGG 0.383395 7.3:-16271160 MS.gene50476:CDS
TAGGAAAACTCTTGTATTAC+GGG 0.386584 7.3:-16266742 MS.gene50476:CDS
GCAAACTTCTCAACTGTTGT+TGG 0.393087 7.3:+16266994 None:intergenic
ATCCAACAGAGCAGATTTCC+CGG 0.395423 7.3:+16267189 None:intergenic
GAAGCTGTAGAGTTTCTAAA+TGG 0.397821 7.3:-16270312 MS.gene50476:CDS
TACATAGGTTACTCAGGAGT+TGG 0.398731 7.3:-16264802 MS.gene50476:intron
CCATGTGAGTTGATTCCTTC+CGG 0.399031 7.3:+16271211 None:intergenic
GATTTGCTTGAGAAGGTTGC+TGG 0.399403 7.3:-16265023 MS.gene50476:CDS
CCTAGAGGATGTGTCGATTA+CGG 0.399768 7.3:+16273351 None:intergenic
TTGCCTCCTTATTGCTGCTA+AGG 0.403808 7.3:-16264970 MS.gene50476:CDS
AGCATTCCAGAAACTGAGAT+TGG 0.405812 7.3:-16264687 MS.gene50476:CDS
ACGGTAATGGGAACATAATC+GGG 0.409061 7.3:+16273370 None:intergenic
TGATCAGGAGCTGTCTTAGA+TGG 0.411417 7.3:+16271055 None:intergenic
GGGACAGCTATGGCAGTTGT+TGG 0.411657 7.3:-16264458 MS.gene50476:CDS
TAAGTAAGTATAACCTGATC+AGG 0.417700 7.3:+16271040 None:intergenic
AGCTATGGCAGTTGTTGGCT+TGG 0.421010 7.3:-16264453 MS.gene50476:CDS
GGATGTGTCGATTACGGTAA+TGG 0.427390 7.3:+16273357 None:intergenic
GGAGTATAATTATTTGAGAA+AGG 0.432166 7.3:+16267015 None:intergenic
GACGTTCTAAGCTCACTTGT+TGG 0.435400 7.3:+16272154 None:intergenic
AAGAGAGTAGGCGGAAGAAC+GGG 0.438407 7.3:+16273409 None:intergenic
TACTCAGGAGTTGGGAATAG+AGG 0.445375 7.3:-16264793 MS.gene50476:CDS
GTGGATCAAGTAATGTCATA+AGG 0.445474 7.3:+16267359 None:intergenic
GATCATCCTTAGCAGCAATA+AGG 0.447279 7.3:+16264964 None:intergenic
ACGGGTTACATGTCTCTTAA+CGG 0.448919 7.3:-16267477 MS.gene50476:CDS
AGAACGGGAAGAACCGTATC+GGG 0.450309 7.3:+16273424 None:intergenic
ACATAGGTTACTCAGGAGTT+GGG 0.451202 7.3:-16264801 MS.gene50476:intron
TGGGCTGTGTTAAGATACTT+TGG 0.451725 7.3:-16271121 MS.gene50476:CDS
TGCCGGGAAATCTGCTCTGT+TGG 0.456830 7.3:-16267191 MS.gene50476:CDS
ACTGAATCTTGCACTGCCCT+TGG 0.458417 7.3:+16264930 None:intergenic
ATCAAATTTGCCAGGCTACA+TGG 0.460279 7.3:+16267337 None:intergenic
ATCTAAGACAGCTCCTGATC+AGG 0.462097 7.3:-16271053 MS.gene50476:intron
AACCTTCTCAAGCAAATCTC+TGG 0.467529 7.3:+16265028 None:intergenic
TTTAACAGATAAATGTGTTA+GGG 0.468424 7.3:-16271498 MS.gene50476:CDS
GCTGGGCAAGGTGATCTAAC+TGG 0.472101 7.3:-16265005 MS.gene50476:CDS
AATAGCTTGTCCACTTCGGC+GGG 0.477295 7.3:+16270109 None:intergenic
GTCGCCGGTGACCGCGGCAC+CGG 0.477326 7.3:-16273487 MS.gene50476:CDS
CTCTGCAGCGACACTATACC+AGG 0.478266 7.3:-16272079 MS.gene50476:intron
GTTCTTAAGAAAAGGGAATC+CGG 0.481078 7.3:-16271152 MS.gene50476:CDS
GGAGCTGTCTTAGATGGAAC+AGG 0.482805 7.3:+16271061 None:intergenic
GGCAGCCTGCCGTGCATATG+CGG 0.487127 7.3:-16264432 MS.gene50476:CDS
ACTTAGTTCTGCATCATTGA+GGG 0.488839 7.3:+16271430 None:intergenic
GATGTGTCGATTACGGTAAT+GGG 0.491822 7.3:+16273358 None:intergenic
ATAACATGTTCTTAAGAAAA+GGG 0.496662 7.3:-16271159 MS.gene50476:CDS
GTTTCGCGAACTACAGAAGT+TGG 0.499373 7.3:-16272964 MS.gene50476:CDS
ATCCAGAGATTTGCTTGAGA+AGG 0.503101 7.3:-16265030 MS.gene50476:CDS
CACTTAGTTCTGCATCATTG+AGG 0.503915 7.3:+16271429 None:intergenic
CGATGTAAATCAAATTTGCC+AGG 0.507019 7.3:+16267329 None:intergenic
ACTCACCCCTATTAATTCAA+TGG 0.509060 7.3:+16266963 None:intergenic
AGAAAAGAAAGCATTACAAT+CGG 0.509617 7.3:-16264662 MS.gene50476:CDS
CTTGAGAAGGTTGCTGGGCA+AGG 0.510718 7.3:-16265017 MS.gene50476:CDS
CCAGCTCAGATGAATATTCG+TGG 0.512064 7.3:-16265058 MS.gene50476:intron
CTTCACCGCATATGCACGGC+AGG 0.513290 7.3:+16264427 None:intergenic
TGTCAAAACAGTTGTACAGC+AGG 0.513674 7.3:-16271239 MS.gene50476:CDS
CGCTGCAGAGCATTCAATGC+AGG 0.514680 7.3:+16272092 None:intergenic
ATGTTATCCCCACCTGGGAT+AGG 0.515462 7.3:+16267451 None:intergenic
ACTTGATCCACCATGTAGCC+TGG 0.519763 7.3:-16267347 MS.gene50476:CDS
GCATTCCAGAAACTGAGATT+GGG 0.520843 7.3:-16264686 MS.gene50476:CDS
CGTTACTGAGAGAACTGATA+CGG 0.522215 7.3:-16267496 MS.gene50476:CDS
CAAGAGAGTAGGCGGAAGAA+CGG 0.524523 7.3:+16273408 None:intergenic
CTGGCAAATTTGATTTACAT+CGG 0.532263 7.3:-16267328 MS.gene50476:CDS
GCAGTTCGAGTCGTCGTCGC+CGG 0.533042 7.3:-16273502 MS.gene50476:CDS
TGATAATGATTTAAAACTCA+AGG 0.533922 7.3:-16271095 MS.gene50476:CDS
AGTTGTACAGCAGGATGTAC+CGG 0.536158 7.3:-16271230 MS.gene50476:CDS
GTTTCTGGAATGCTCAAATG+AGG 0.536826 7.3:+16264696 None:intergenic
GTCGGAGTCATTCCCCGATA+CGG 0.539145 7.3:-16273437 MS.gene50476:CDS
AACACAGCCCAAAATGTCTC+CGG 0.540157 7.3:+16271133 None:intergenic
TAAATGTTTCAATGCACCAT+TGG 0.546345 7.3:-16271281 MS.gene50476:CDS
AAATAGCTTGTCCACTTCGG+CGG 0.550017 7.3:+16270108 None:intergenic
AGCCCTAAAACCCGCCGAAG+TGG 0.553333 7.3:-16270119 MS.gene50476:CDS
TCACTACTATATAGGGAACT+AGG 0.556000 7.3:-16266761 MS.gene50476:intron
TGGATCAAGTAATGTCATAA+GGG 0.557134 7.3:+16267360 None:intergenic
ATTTGCTTGAGAAGGTTGCT+GGG 0.560141 7.3:-16265022 MS.gene50476:CDS
ACAAAATAGCTTGTCCACTT+CGG 0.560250 7.3:+16270105 None:intergenic
TTACAGAGTGTGGAGCTGAC+AGG 0.561714 7.3:-16270336 MS.gene50476:intron
GTCGTCGTCGCCGGTGACCG+CGG 0.565527 7.3:-16273493 MS.gene50476:CDS
TGTTGGATGCATTATTGGGA+AGG 0.569658 7.3:-16267174 MS.gene50476:intron
GCAAGAAACAAACGACAGAA+AGG 0.574584 7.3:-16267249 MS.gene50476:CDS
TCGCGAACTACAGAAGTTGG+AGG 0.576286 7.3:-16272961 MS.gene50476:intron
ATGATCTAACTCCATATCCA+AGG 0.576645 7.3:-16264947 MS.gene50476:CDS
TGACTTTCATGATCAAACAA+TGG 0.586469 7.3:+16271524 None:intergenic
TCTTCTTCACCGCATATGCA+CGG 0.587539 7.3:+16264423 None:intergenic
TTGATTTACATCGGATATAG+CGG 0.589570 7.3:-16267319 MS.gene50476:CDS
TAATCAGCGGGCAAGAGAGT+AGG 0.590271 7.3:+16273397 None:intergenic
ATTTACAGTTGGGACAGCTA+TGG 0.591477 7.3:-16264468 MS.gene50476:intron
TAATCGGGGAAATAATCAGC+GGG 0.592090 7.3:+16273385 None:intergenic
GCTATTTGAGGTAACTCCAA+TGG 0.596574 7.3:+16271265 None:intergenic
GACTCGAACTGCATTTCGAT+CGG 0.596600 7.3:+16273513 None:intergenic
TTATATGGAGCATCATTCCA+TGG 0.597123 7.3:+16267522 None:intergenic
GGTAACGGTACCTGTAATTG+TGG 0.599004 7.3:-16272208 MS.gene50476:CDS
ACGGTACCTGTAATTGTGGT+TGG 0.601075 7.3:-16272204 MS.gene50476:CDS
TGTTCTTTGTGACCGTGACA+TGG 0.602570 7.3:-16271459 MS.gene50476:CDS
TCTTAACGGATTCCTATCCC+AGG 0.602973 7.3:-16267463 MS.gene50476:intron
GTAACACGGAGTGCTGCAGC+AGG 0.603603 7.3:+16267292 None:intergenic
AAGAACGGGAAGAACCGTAT+CGG 0.605574 7.3:+16273423 None:intergenic
CCGTAATCGACACATCCTCT+AGG 0.606964 7.3:-16273351 MS.gene50476:intron
TGCAGAGCATTCAATGCAGG+TGG 0.609820 7.3:+16272095 None:intergenic
TCAGCGGGCAAGAGAGTAGG+CGG 0.611296 7.3:+16273400 None:intergenic
CCTCATCGCTGCCATCGCGT+CGG 0.617131 7.3:-16273455 MS.gene50476:CDS
GGGGAATGACTCCGACGCGA+TGG 0.624040 7.3:+16273444 None:intergenic
AAGCGCAATGAAGAATTGAA+AGG 0.624113 7.3:-16273056 MS.gene50476:CDS
TTAGCAGCAATAAGGAGGCA+AGG 0.625160 7.3:+16264972 None:intergenic
CCGGAAGGAATCAACTCACA+TGG 0.627523 7.3:-16271211 MS.gene50476:CDS
TGAGGGCATCATCCATGTCA+CGG 0.628027 7.3:+16271447 None:intergenic
AGTGAGCTTAGAACGTCTCA+TGG 0.628287 7.3:-16272148 MS.gene50476:CDS
CATCCTTAGCAGCAATAAGG+AGG 0.632991 7.3:+16264967 None:intergenic
CTGATCTCCTACGAGTAACA+CGG 0.641883 7.3:+16267278 None:intergenic
AAATGCCATTGAATTAATAG+GGG 0.644139 7.3:-16266968 MS.gene50476:intron
CAGCACTCCGTGTTACTCGT+AGG 0.644205 7.3:-16267285 MS.gene50476:CDS
TTTCTGGAATGCTCAAATGA+GGG 0.646076 7.3:+16264697 None:intergenic
GTAAGAACTCAATCGCGAAG+AGG 0.647403 7.3:+16272989 None:intergenic
TGATCTAACTCCATATCCAA+GGG 0.648802 7.3:-16264946 MS.gene50476:CDS
GGCAGTGCAAGATTCAGTGA+AGG 0.654639 7.3:-16264925 MS.gene50476:intron
CCGACGCGATGGCAGCGATG+AGG 0.658325 7.3:+16273455 None:intergenic
GAACGGGAAGAACCGTATCG+GGG 0.666195 7.3:+16273425 None:intergenic
CGGTAATGGGAACATAATCG+GGG 0.669832 7.3:+16273371 None:intergenic
CTGTCTTAGATGGAACAGGA+AGG 0.680074 7.3:+16271065 None:intergenic
GTACAGCAGGATGTACCGGA+AGG 0.683079 7.3:-16271226 MS.gene50476:CDS
GTTACTGAGAGAACTGATAC+GGG 0.687869 7.3:-16267495 MS.gene50476:CDS
AAATTTGCCAGGCTACATGG+TGG 0.705689 7.3:+16267340 None:intergenic
ATAATCGGGGAAATAATCAG+CGG 0.709329 7.3:+16273384 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.3 gene 16264409 16273545 16264409 ID=MS.gene50476
chr7.3 mRNA 16264409 16273545 16264409 ID=MS.gene50476.t1;Parent=MS.gene50476
chr7.3 exon 16273352 16273545 16273352 ID=MS.gene50476.t1.exon1;Parent=MS.gene50476.t1
chr7.3 CDS 16273352 16273545 16273352 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16272962 16273094 16272962 ID=MS.gene50476.t1.exon2;Parent=MS.gene50476.t1
chr7.3 CDS 16272962 16273094 16272962 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16272080 16272229 16272080 ID=MS.gene50476.t1.exon3;Parent=MS.gene50476.t1
chr7.3 CDS 16272080 16272229 16272080 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16271421 16271597 16271421 ID=MS.gene50476.t1.exon4;Parent=MS.gene50476.t1
chr7.3 CDS 16271421 16271597 16271421 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16271054 16271305 16271054 ID=MS.gene50476.t1.exon5;Parent=MS.gene50476.t1
chr7.3 CDS 16271054 16271305 16271054 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16270284 16270352 16270284 ID=MS.gene50476.t1.exon6;Parent=MS.gene50476.t1
chr7.3 CDS 16270284 16270352 16270284 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16270091 16270146 16270091 ID=MS.gene50476.t1.exon7;Parent=MS.gene50476.t1
chr7.3 CDS 16270091 16270146 16270091 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16267464 16267545 16267464 ID=MS.gene50476.t1.exon8;Parent=MS.gene50476.t1
chr7.3 CDS 16267464 16267545 16267464 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16267175 16267386 16267175 ID=MS.gene50476.t1.exon9;Parent=MS.gene50476.t1
chr7.3 CDS 16267175 16267386 16267175 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16266969 16267038 16266969 ID=MS.gene50476.t1.exon10;Parent=MS.gene50476.t1
chr7.3 CDS 16266969 16267038 16266969 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16266657 16266769 16266657 ID=MS.gene50476.t1.exon11;Parent=MS.gene50476.t1
chr7.3 CDS 16266657 16266769 16266657 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16264926 16265076 16264926 ID=MS.gene50476.t1.exon12;Parent=MS.gene50476.t1
chr7.3 CDS 16264926 16265076 16264926 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16264631 16264817 16264631 ID=MS.gene50476.t1.exon13;Parent=MS.gene50476.t1
chr7.3 CDS 16264631 16264817 16264631 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
chr7.3 exon 16264409 16264482 16264409 ID=MS.gene50476.t1.exon14;Parent=MS.gene50476.t1
chr7.3 CDS 16264409 16264482 16264409 ID=cds.MS.gene50476.t1;Parent=MS.gene50476.t1
Gene Sequence

>MS.gene50476

ATGGCAAAGACCGATCGAAATGCAGTTCGAGTCGTCGTCGCCGGTGACCGCGGCACCGGAAAATCAAGCCTCATCGCTGCCATCGCGTCGGAGTCATTCCCCGATACGGTTCTTCCCGTTCTTCCGCCTACTCTCTTGCCCGCTGATTATTTCCCCGATTATGTTCCCATTACCGTAATCGACACATCCTCTAGGTAAATTACGCTATTAATTGCATATATATTTCGAATGAATCACTTTCCATTTTTATCAATTAACTGATCAATTAAAGTCAACCTCTGCATTTAAATCATTAATTTAAGTTTGATTCAATATTTATTTTACCTAAAATGTGTGTTGTATTGCATTTTCTTCACTGAATTTTGTTTGCCACGTGTCTACTTTATGTTTGTCGATGACTCGATTTGAAATGATTGATTGGTGAATGAAATTGTGTTGTTGATTTTTCTAGTTTGGAGAAACAAAACAAGCGCAATGAAGAATTGAAAGGTGCTGATGTCGTAGTTTTAACATATGCTTGCAATAATTCTCAGTCCTCTTCGCGATTGAGTTCTTACTGGTTTCGCGAACTACAGAAGTTGGAGGTTCGTGTGTTTTTATGCATTTTGCTTGCTTTCTTGATAGGAAAATGTTAGAATGCTCTTTCTTATATACTTTCTATTATTAGGCGAATGCTAAGCATTTTGTGCTAAATGTTTGGTATCATGGTGAGTTTGCCAGAATCAGAGTGAGTCGTCGTGATTTTGGCAAATCTTTCGCGATAACAAACATGCTCTTTCTCTCCTAGGGACTAAGTCTAGTATGGAGAGTATTTTTGTATAAAATACATAATACCAATCTTACATAATTTTGGAATTTGAGTGTGAGCAGTTAGTTTTACATTGGCTAGGAATGAGCTAACTGAAGAATATATAATCGATATGTACCCATATAACTAATGCTTTAGGGTTTTGGGTGAGATATTGTGTCTTGCTCTTTTAGTGGTTCTGGTTATTCGTCTGTTGTTGTTCGTGATGTTCATGACCCAACTCAAATCGGTGCGAGTACAAGATCTTTACTAGTTTTTTCTAACCATGATTGTCATCAGACATTTACTCCCACTGTTATGCTGCCTAGTGTACACCTTCCAGATTTGTGGCCTGGCTGGTTTATAGACCAATAGATCAATCTATCTGATCCCATCACATGCTCTCTCTTTAGTAAAATCTACATGAAACTTAACTAATAATAAACAAATTGAAAAGTGTGTAATGCTATTTGCTATCACTCTTCTTTTTGAGGAGTCATGGAAGTATATTATCTATTTTGTGATACAGGTAACGGTACCTGTAATTGTGGTTGGTTGCAAGCTAGATCTGCGAGATGAAAGCCAACAAGTGAGCTTAGAACGTCTCATGGCACAGCTCCTACAAGAGTTCAAGAATGTTGCCACCTGCATTGAATGCTCTGCAGCGACACTATACCAGGTATATTGCGTTGCGTTCCTGTATTATCTTTTCACGAGGTATTGCTAGCTTATTTACATAGAGTATATTATGTTTTGTGCATACAAGATGAAATTCTATAAGTTTATCTTTCTTTTTTTCTTGATTAAAACTCAATGAATCCTATAAAGATTTCTATGACATTCATTACATCAATATCTTACAAGTTAATGAAGTTTCCAACGTGTTTCCCTATTCTAAAATACAATCCCGTGCTTTATTGAAGGCCAAATGACCTTTAATCATCAAATACAAAACTGAAAAGATACAAAAACAGCTAAATAGTTTCCCATTTATTCTTTACAAGTAAAGTGTGAAGTAAAAAATTTGTGCATCTCTGCAATATTGCAATTGTTTTGAGTTGTGCAAATAAGCAAAGACATCATCTTCATAATGTTATTTCTGTATTTGACTTCAATTTGGAAATAATTGCTTGAAATGTAATGTTAATCTTACTTTTTTAGGTCCCAGAAGTTTTTTATTTTGCTCAAAAAGCTGTACTACATCCAGTAGAGCCATTGTTTGATCATGAAAGTCAAGCTTTAACAGATAAATGTGTTAGGGCGTTGAGAAGAATATTTGTTCTTTGTGACCGTGACATGGATGATGCCCTCAATGATGCAGAACTAAGTGATTTTCAGGTTTTTAATAGATTTGGAATTTTATTTTTTTTATTTCCGTTTTATTTAATGTACTCCGAGAATGCAGTGTTTTCATTTGTGTCCCCTTTATTCAAAACTTTCAATACATCTACAGGTTAAATGTTTCAATGCACCATTGGAGTTACCTCAAATAGCAGATGTCAAAACAGTTGTACAGCAGGATGTACCGGAAGGAATCAACTCACATGGTCTTACTTTTCCAGGATTTTTGTATATACATAACATGTTCTTAAGAAAAGGGAATCCGGAGACATTTTGGGCTGTGTTAAGATACTTTGGATATGATAATGATTTAAAACTCAAGGATGATTTCCTTCCTGTTCCATCTAAGACAGCTCCTGATCAGGTTATACTTACTTATTCTATTATTATGTAAATTTCACCATTGTCTTCCTATCCGGTTTGAGTGGAAGAGGTTGGAGTAGTGATACTATCATTTAACTAAACAATTTTCAATATTGGTATCAACAGTAACAGAAAATGCAAATTGTTGTTAAATTAGAAGGACTAAAAGTTTATCTGCTGGTTATGCATGTTTATTGTAATAATTCCATTCACCAGTAGGTTTTCGCATGGTTGATGATCGCTTAAAACCAAGTGTACTCAGGGTTTTGCAAATATTAGCTGTAAACATAATTTCTTGGGTCTAGGATTGATGATTTGGAAAAATCAAGTGTAGAGTTTCTATTCGTTTCAGAAAATGATTCTTACATGTTTCGTGGTTATTCCATTGATATTTCCTTATCTGTTTCCATTTATTGTACAAATATGGCAGTTTGGATTTCGACCAGTGTATTATTGATCTTGACATATTATACAGTTATTCATGTTGTTAATTATTACTGGGATAGAGAGACGACAAATGCAGAGATTTGGTGTCACTGATTTTATGATGCAATCTTGTTAAGTCAAATAATGGTTTTAAAAGAAGCACAAGACACACTATCCACTTTTTACCTAATAGTATTTTCCAGCATTTTTGGTCATTAAGTCATTATTAATGTAGTTATTTTACACTCTATTCAACTTTCATTGATAATCTTACAGAGTGTGGAGCTGACAGGTGAAGCTGTAGAGTTTCTAAATGGCATCTTTAGACTATTGGATACCGATAAAGTATGTACTAATGATTTTTATTATCACTTCCATAGCCATACTATGTACTTTAACCTTATCTCCTTCCACGTTATTTTTTAGATGATATTCAACGTGCTTTTATCTGATTTGTTTCTTTGAACATTGATATTCTATAGGACCGAGCCCTAAAACCCGCCGAAGTGGACAAGCTATTTTGTACTGCTCCAGAAAGGTGTGTGAACTTGTAAACTCCCCCCCACCCCAAATAAAATTTAAATCTTTCTATGCATATAACAGAAAGAAAACTTGCCTTTTGATTGTTTTGGAAACAGCATCTTTGCTTGCACCGGTAAGGCTGCGTATATCTACCCTCCCCGGACCCCGCTTGGATGCATTGGGATGCCCTTGAAAATGATCAGGGATAGTATTTTCTTAAAAACAAATTGTAGCTATTGTTGGACCGTTATACTCCCAGACTTATCTATTAAGAAGCTTCAATATCTTATTAAGACAGTTTGGTTCTAAAAACAATTTATTGGAGTCATCACTAGAAATTTGGAATACGTGGGTTTGTGTCAGGATGCATCTTCTAGGAGGAAGTTGTTAGTCAATTAGCCCATTGGCTTGATAAGATAAGATTTGTTAGTTACGTATTTAAATTTGTTGTAAGAGATGGGGATAACCTTAAAGGGAAAGCACTCGCGAAATTCTTGATTTATACTGATTTCTCAATTGCTAAAGAACGCTTGGCGGCAAGAATTGGTGCAGGGCAAGTGGTGGCACCCACTTCTTTACAAAAGGTTAGGTATGAGGGGCGGTGAGAAACGTGGATAGGGAAGCGGTGGGTATGCTGCCTCAACAACCTTGAGTACGACGAGACGACGAGTAACGTGTTGGATCAGGGCTTATTCAAGGCTTCGGACACTAGGAAGTTGCCTTCTTGTGAGTTTCTTTAGAAGGAGGAAGGGAGATTCTTCAAGTGCGGGTGACTGTTTAGTCCTGAGCAGTGAGCATATATGATGTCCAAAGGTGCAGGTCCTGATCCTTGCTTAGGATCAACAATCCAGAGAGGCTGCTTATCTGGAAGGGAAATTTGCATGCTAGGGAAATGATCAGTTGGAAGTCTGGCAAAGTGGGAATCCTCAGTTTTCGCATTGAGGGCAAGGTGGAATTTAAAGGGGAATGTATTGTTAGGATGTATCTTCTAGGTTGAAATAAGGACATCTTTAGTCTATTAGTCTTTTAGTTAAATTAGTTGGTTTGGTAGTTGAATTTTTCGTAAAATATAGAGGTATTTTTTCTATATAGGGATAAGACACTTGTAGAATTCTTGATGGAAACTGGTCTCTTAGTTGTAAGGGTTACCGCCCTGGCAAGGTTATGAGAAACCTTGTGAGTCAGAATAATAACATTGCATATTCTTTCTTCCTGCTTTCTTGCCGTGCCCATTCTCTGTAATTATTTCTTTCCTCTACATTCCCCTAGGTTCCCATCTCAGGAATCTAACAGTTCGAAAGAATGTTTTTCACTTCTTTTCTTGACAAGTCTCTTGTTTCTGTAGAATTAAAACAGAATTTCATTCAACATATCATCGGCAAGCATCATATTATCCTACTGCATTATGTGAGCTCACAAAACAATATACGTTCAAAACCTTGATACAAAATTTTACTGATAAAACTAAAACTGATGATAAATTCCACCAAGAACAATGGAGCTTAGCTCCTTATGTAAGAGATGTTCTCTAGAACAGAACCCAAGAAACATGACAAAGCATCCTATTTCCCAGAACATAAAGATAAGGAATTAACACCAGATACAGTGCCATTCCTTTCCCCAATCAATGGCATTGTATTCTTGCCTTACTTCTTTGATAATCCCCTCTCCCATATCTTTCCTCTCTGTTAGAATATGGAAACTAATACACAACAGGTTTTTTCTACTCCCATCTTTCTGTTTCATTCCTCTTCTATAAAGTGGGCCAATGATCTATCATGTTGAAGTTACAGGTTTCAGATAAAACAAGGAGAAAAATAATAAGAGCTTCTAATCATAAATAAATTGGAAAATAAGGAACCAAATCACATTAAAATCTAATCCTAAGAAATAAACTGAGATACTCTACTGCTATATCAAAATATTATAAGATATTTTCTTATATTCTAACACGCTCCTCAAGCTAAAGCTTACTAAGCTATAACCTTGTTACAAATATACTCTTTAAAATAGAAACGTAACACCTCACATAATAACTTGATTGTAGCTTGATAGCAACTTGATAGAAATCTACATATAGAGATACAAGGCTCTATTCATAAATAAATAGATAAGTGAGGAAACAAATCATTGTAATATCTAAGTAATATAAAAACTAATCCTAAGAGATCTATGATACTCAAAAACTGTAAATTATTCCTAGGAAATAAACTAAGATGCTCTAATATAATATCAAAGCCATTATAAGATATTTTCTTATATTCTAATATATCAACCCTATGAGGCCCATTTTTCGTTTCTTTCCTCTATTTTTATGCATGTAGATCAATGGCCCACCACAGGTTACCTTCAGAAGCATTAAAATTTTAGACATTTTCAAGTGAAGCCTATCCACTTGCAGTTTGATCTTAACTTTATAGTGATTCAAATGTGATATTTTATTTGCAAATTATTCACTTTGTTTCCTTCTTTTTCAATTGTGATAATACTGAAATGATTTACAGCTATATGTTAGTTTCTCCACTTGATTCTTATGTTCAGTAGTTCGTTTTGAATTGCAGTCCATGGAATGATGCTCCATATAACGACGTTACTGAGAGAACTGATACGGGTTACATGTCTCTTAACGGATTCCTATCCCAGGTGGGGATAACATGTACTCTTTTTTAGTCTTCACCATGAGATAGTTATTGATATATTTCCTACATTTTATGATGCAGTGGGCCCTTATGACATTACTTGATCCACCATGTAGCCTGGCAAATTTGATTTACATCGGATATAGCGGTAATCCTGCTGCAGCACTCCGTGTTACTCGTAGGAGATCAGTTGATCGCAAGAAACAAACGACAGAAAGGAATGTGTTCCAATGCTACGTTTTTGGTTCTAAAAATGCCGGGAAATCTGCTCTGTTGGATGCATTATTGGGAAGGTGTGCTTCTAAACCAATTACCATAGTCAGCGCATCTTTTGAATTTATGTTGATCCATGAGCAAGTAAAATTTATCCACTCTTAATGTTTATGTTCATTTTTCTTCAAAGTAACACTTACATCACCGATCTTGTAGGCCTTTCTCAAATAATTATACTCCAACAACAGTTGAGAAGTTTGCTGCAAATGCCATTGAATTAATAGGGGTGAGTATCAAGGTGGGAGAAGATTATTATTACTTATATCAATTTTAAAAGTATGCTTTATTTCTTTTATGCTCTGCAGTGATGCAACATACTCTGTAACTAGTAAATGTAGGAGTCACATTGATGTTGTGGGGGAAGTTAAGTGAGTATAATGTGCAGTTTTTATATACTTTTGATCTTGTTGTTCACTACTATATAGGGAACTAGGAAAACTCTTGTATTACGGGAGATACCTGAGAGTGAAGTATCAAAATTTCTGTCAAATCAGGATTATTTGGCTGCGTGTGATGTAGCTGTTTTTGTGTATGACAGGTATGGTGCAAATGAATTTGTGTGTTCGTGCTTTGTTACATTTAAATTTTAATCTGTAGGAGTGATTGTTTTGCATTCTTGTTTTACCTTCACCAGCATTTTATGTATGGATGTGTTAGTAGGCCTCCTATTAAGCACATTTATGTAAGGCACAGACCCAACAGTCCTTGCCTAATTTAATATAATACATGTAGAATAAGTAGAAGTGGGAAGAGAATGTTGGGGATTCGGTTATTTACCTGGCAGATGGTTGGCTGGGAGAGGGACACAGGATCTGTAATCCTATAAGCTGTGGAATATAGTAACTGCCGGAATAGAAGTTATAACTTCCCCATATATGCGTGTATGTAAATTAATTCCCCAATGCTTTGTTGGGAGTTATGGGGGAAACACTTTGGGGGGGGGGGTGGGGGGGGGGTGGGGGGGTGGGGGGGGGGGGGCTAATTGAGGGGAACCCATCACCTTATTTGGGAGTGTTTTTATAGGGGAGGAGAAGAGAATACTTGTATAATATTTTCTTTGTTTTGAGAGTATTATGAAGTGAGGGAAAGGATTTGGAAGTTTATTCAAAACCCTCCAAAGTCTTTAATGGTGTATTTCCCCATAAACTAGTTAGTTATCAATGTAAATGTTATTTTATGAATTAAAATTTAAAACCTATACTAAATCCCCACCGCTGTCACTACCTAGCAACATCAACACCATTGCTGCCACCATGGACTCTCCCATTGTCGTCGTCTAACACCCTCCACAATCACATCAACTGCAACTCGGCACCATTCTCCTCACCGGCCCAGAATTGTCTGGCATTGTCGTCCAATATTTTACCATAAAACAAATTATCGAACACTTTTTTTTTTGTTTTAATTTATCAGTATAAACTGTTTCCAAATTAATATACCTCACTGGCCCAGAAATGTCCCACATTACACCATAAAACAAATTACTGGACACATTTTTTGTTTGTTTTAAATCATTATAAAAAAAATTCAAATTAATGATAACAATTGGTTTTTTTTTTTTTTTTTTTTTTGTAAGGAAAGGCAGTTTTGAAAATTGTTTTATAGAATAGTTTATTTGGGGGAAAAACTTAATGAAATGTACCCTTAATCTTTGACATATTCGTCTTGATTGTATTGGAAATCGACATGAAGTTTGATACGGCTTGCATTTTCATGGTTCTCGACCTCCTAGAGAAATGATCATATCAAGTTAGAGGAATGATTTGTTGTATGTGGAGTTAATAATAGCCAATAAATTATAACAAATTATGAGATCAAAATTTTCACTAAAATCTGATATATATATATATATATATATATATGATCTGTTTCATGCCAACAACATTGGCAGTATTCCTGCTTGTAAAGAAGGAACGAAAACTCGATGCATCGTCATCTGCACTTGTTCTAGGGAAGGCTATCCTCTCATTCAAATTCATGTTATTTAAAATTATAAAAAGCGATTCTCATGTACTTGTATGAGTAATGCTGTACCAGATTTTGAGAGGGATCTTTATCATGCCTATTCTATTGTTCCAGTATCTTCTTAGTTTTTGCTCTTTTGTGCTTGTTTTCCAGCTCAGATGAATATTCGTGGAAGAAATCCAGAGATTTGCTTGAGAAGGTTGCTGGGCAAGGTGATCTAACTGGTTATAGAGTTCCTTGCCTCCTTATTGCTGCTAAGGATGATCTAACTCCATATCCAAGGGCAGTGCAAGATTCAGTGAAGGTATTGCATTTCCAGCCACGTGTTATCATATAATTGATTAAGTTATGCACAATTTCATAGCTCAATCTGACAGTTCAGAATGTTATCATCTATTTATTTTTTACATAGGTTACTCAGGAGTTGGGAATAGAGGCACCTATTCACGTAAGCATGAAATTAGGTGATTCAAGTAATGTGTATAATAAAATTGTTAGTGCTGCAGAACACCCTCATTTGAGCATTCCAGAAACTGAGATTGGGAAGAAAAGAAAGCATTACAATCGGCTTGTTCAGAACTCTCTTATTTTTGCTTCAGGTGTTTCTTTTAACTTTTCCTACCAGGACATGATGCATACATACATCACAAATTTGCAAAATACCCATTTTTCTGTTGTTCAAGTGTTGATTGTTAATTGGCAAAAAAAAATTGATTGCTAAAATAGTTTTCTATGTTGAATTTACAGTTGGGACAGCTATGGCAGTTGTTGGCTTGGCAGCCTGCCGTGCATATGCGGTGAAGAAGAATTCTTCTGCTTAG
Protein sequence

>MS.gene50476.t1

MAKTDRNAVRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFPDYVPITVIDTSSSLEKQNKRNEELKGADVVVLTYACNNSQSSSRLSSYWFRELQKLEVTVPVIVVGCKLDLRDESQQVSLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFAQKAVLHPVEPLFDHESQALTDKCVRALRRIFVLCDRDMDDALNDAELSDFQVKCFNAPLELPQIADVKTVVQQDVPEGINSHGLTFPGFLYIHNMFLRKGNPETFWAVLRYFGYDNDLKLKDDFLPVPSKTAPDQSVELTGEAVEFLNGIFRLLDTDKDRALKPAEVDKLFCTAPESPWNDAPYNDVTERTDTGYMSLNGFLSQWALMTLLDPPCSLANLIYIGYSGNPAAALRVTRRRSVDRKKQTTERNVFQCYVFGSKNAGKSALLDALLGRPFSNNYTPTTVEKFAANAIELIGGTRKTLVLREIPESEVSKFLSNQDYLAACDVAVFVYDSSDEYSWKKSRDLLEKVAGQGDLTGYRVPCLLIAAKDDLTPYPRAVQDSVKVTQELGIEAPIHVSMKLGDSSNVYNKIVSAAEHPHLSIPETEIGKKRKHYNRLVQNSLIFASVGTAMAVVGLAACRAYAVKKNSSA