AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50548


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50548.t1 MTR_1g071370 97.292 1071 29 0 33 1103 1 1071 0.0 2185
MS.gene50548.t1 MTR_1g015110 33.478 230 98 7 258 478 368 551 2.09e-23 106
MS.gene50548.t1 MTR_3g104710 32.589 224 96 6 258 472 364 541 3.05e-23 105
MS.gene50548.t1 MTR_5g009370 34.956 226 86 8 258 472 157 332 1.50e-22 100
MS.gene50548.t1 MTR_4g125810 31.897 232 96 8 257 474 324 507 7.31e-22 101
MS.gene50548.t1 MTR_1g014640 28.740 254 123 6 215 468 126 321 2.25e-21 97.4
MS.gene50548.t1 MTR_1g013400 28.740 254 123 6 215 468 126 321 2.25e-21 97.4
MS.gene50548.t1 MTR_3g068200 31.489 235 98 6 258 479 200 384 2.64e-21 97.8
MS.gene50548.t1 MTR_3g105730 27.953 254 125 6 215 468 61 256 4.10e-21 95.1
MS.gene50548.t1 MTR_3g105730 27.953 254 125 6 215 468 83 278 7.59e-21 94.7
MS.gene50548.t1 MTR_1g028300 39.735 151 81 6 332 476 240 386 6.26e-20 94.0
MS.gene50548.t1 MTR_2g040500 25.389 386 195 15 104 472 228 537 5.93e-19 92.4
MS.gene50548.t1 MTR_8g102550 30.137 219 105 5 258 474 220 392 1.83e-18 89.7
MS.gene50548.t1 MTR_1g115570 29.958 237 104 9 232 468 161 335 1.32e-16 83.2
MS.gene50548.t1 MTR_3g464650 25.100 251 130 7 230 473 118 317 1.49e-16 82.4
MS.gene50548.t1 MTR_6g081850 24.540 326 153 8 103 428 51 283 1.57e-15 79.3
MS.gene50548.t1 MTR_3g091060 27.642 246 120 6 232 477 160 347 2.48e-15 79.3
MS.gene50548.t1 MTR_3g105880 24.934 377 184 13 74 436 5 296 1.50e-14 76.6
MS.gene50548.t1 MTR_5g071550 22.193 374 162 10 103 473 130 377 7.99e-14 75.1
MS.gene50548.t1 MTR_3g464700 38.136 118 68 3 307 424 186 298 1.38e-13 73.9
MS.gene50548.t1 MTR_5g071550 23.547 327 133 8 103 429 130 339 5.64e-13 72.4
MS.gene50548.t1 MTR_2g078760 28.241 216 94 9 258 471 177 333 4.65e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50548.t1 AT3G63340 55.713 1059 408 15 56 1101 30 1040 0.0 1153
MS.gene50548.t1 AT3G63340 55.650 1062 403 17 56 1101 30 1039 0.0 1150
MS.gene50548.t1 AT3G63340 55.650 1062 403 17 56 1101 30 1039 0.0 1150
MS.gene50548.t1 AT3G63340 54.029 1092 408 16 56 1101 30 1073 0.0 1136
MS.gene50548.t1 AT3G63340 54.985 1033 397 17 56 1072 30 1010 0.0 1100
MS.gene50548.t1 AT3G63340 54.873 1026 395 17 56 1065 30 1003 0.0 1087
MS.gene50548.t1 AT3G63340 54.873 1026 395 17 56 1065 30 1003 0.0 1087
MS.gene50548.t1 AT3G63340 54.873 1026 395 17 56 1065 30 1003 0.0 1087
MS.gene50548.t1 AT3G63340 54.873 1026 395 17 56 1065 30 1003 0.0 1087
MS.gene50548.t1 AT3G63340 52.009 871 352 16 56 910 30 850 0.0 848
MS.gene50548.t1 AT3G63340 65.473 391 117 4 711 1101 2 374 1.23e-177 525
MS.gene50548.t1 AT3G63340 56.054 446 174 6 56 489 30 465 1.54e-162 491
MS.gene50548.t1 AT3G63320 57.265 351 126 4 122 472 56 382 4.32e-125 389
MS.gene50548.t1 AT3G63320 56.522 322 117 3 151 472 1 299 3.69e-112 353
MS.gene50548.t1 AT5G57050 32.308 260 115 8 229 474 163 375 2.98e-24 106
MS.gene50548.t1 AT5G57050 32.296 257 113 8 232 474 206 415 5.24e-24 106
MS.gene50548.t1 AT4G26080 30.888 259 115 8 228 471 214 423 2.44e-22 102
MS.gene50548.t1 AT1G72770 32.258 248 105 10 237 472 307 503 7.76e-22 101
MS.gene50548.t1 AT1G72770 32.258 248 105 10 237 472 307 503 7.76e-22 101
MS.gene50548.t1 AT1G72770 32.258 248 105 10 237 472 307 503 7.76e-22 101
MS.gene50548.t1 AT5G24940 31.381 239 102 8 232 468 99 277 7.72e-21 97.4
MS.gene50548.t1 AT4G31750 28.044 271 135 7 215 485 82 292 1.30e-20 94.4
MS.gene50548.t1 AT4G31750 28.044 271 135 7 215 485 82 292 1.85e-20 94.0
MS.gene50548.t1 AT4G31750 28.044 271 135 7 215 485 82 292 1.85e-20 94.0
MS.gene50548.t1 AT5G10740 29.958 237 108 6 232 468 99 277 3.16e-20 94.4
MS.gene50548.t1 AT5G10740 29.958 237 108 6 232 468 99 277 3.16e-20 94.4
MS.gene50548.t1 AT5G51760 33.043 230 94 6 257 472 200 383 8.31e-20 93.6
MS.gene50548.t1 AT1G17550 31.278 227 95 8 258 472 326 503 8.44e-20 94.7
MS.gene50548.t1 AT1G17550 31.278 227 95 8 258 472 326 503 8.44e-20 94.7
MS.gene50548.t1 AT5G51760 33.043 230 94 6 257 472 230 413 1.11e-19 93.6
MS.gene50548.t1 AT2G29380 32.883 222 89 7 258 470 190 360 1.49e-19 92.4
MS.gene50548.t1 AT5G59220 36.000 175 62 6 258 432 221 345 3.89e-19 91.7
MS.gene50548.t1 AT1G43900 28.333 240 113 6 232 471 189 369 7.00e-19 90.5
MS.gene50548.t1 AT1G07430 33.714 175 66 5 258 432 233 357 8.33e-18 88.2
MS.gene50548.t1 AT1G07160 21.196 368 170 8 103 470 129 376 1.31e-17 86.7
MS.gene50548.t1 AT3G11410 34.286 175 65 5 258 432 221 345 1.95e-16 83.6
MS.gene50548.t1 AT2G34740 29.583 240 105 8 232 468 154 332 7.34e-15 77.8
MS.gene50548.t1 AT2G30020 31.250 144 85 4 333 473 263 395 1.15e-14 77.8
MS.gene50548.t1 AT2G40180 25.820 244 124 8 231 473 201 388 1.43e-14 77.4
MS.gene50548.t1 AT1G67820 30.570 193 81 5 228 420 153 292 6.24e-14 75.9
MS.gene50548.t1 AT1G67820 30.412 194 82 5 228 421 189 329 7.57e-14 75.9
MS.gene50548.t1 AT4G28400 26.512 215 97 7 258 470 105 260 4.32e-12 68.2
MS.gene50548.t1 AT4G28400 26.512 215 97 7 258 470 127 282 7.00e-12 67.8
MS.gene50548.t1 AT1G34750 29.767 215 90 9 258 470 126 281 6.89e-11 65.1
MS.gene50548.t1 AT1G34750 29.767 215 90 9 258 470 126 281 6.89e-11 65.1
MS.gene50548.t1 AT1G34750 29.767 215 90 9 258 470 126 281 6.89e-11 65.1
MS.gene50548.t1 AT1G03590 26.601 203 101 4 232 425 159 322 7.01e-11 66.6

Find 259 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTAATCCCTGGGGTTTC+TGG 0.128881 1.2:+54688174 MS.gene50548:CDS
CTCCTGCACAATTATCTTCT+TGG 0.150542 1.2:-54689876 None:intergenic
GCTAGAGATCCTCTTAAAAT+AGG 0.177908 1.2:+54689260 MS.gene50548:CDS
GCATTTATCTGGAAAATATT+TGG 0.181104 1.2:-54687726 None:intergenic
TGCTTTAACACGTGCTCTTT+TGG 0.206321 1.2:+54687746 MS.gene50548:CDS
ATGCTTCTACTGGGCCTTCT+AGG 0.241354 1.2:+54687341 MS.gene50548:CDS
GTTCAAACCTTCTTCATATA+TGG 0.241764 1.2:-54684120 None:intergenic
TCTTGGTGGAGGTTGGAAAT+AGG 0.242007 1.2:-54689859 None:intergenic
GATGCAGGTTTCCCATTATT+TGG 0.255370 1.2:+54679328 MS.gene50548:CDS
ATTAGGTGCAATGGGGATTA+AGG 0.266498 1.2:+54677152 MS.gene50548:intron
GAAGTGAAACATGGTGATTT+TGG 0.270964 1.2:+54681130 MS.gene50548:CDS
GGTTGCAGATGATAAAATTT+TGG 0.273866 1.2:+54678165 MS.gene50548:CDS
ATCAGAAAATCTTGGTGATT+TGG 0.274395 1.2:+54681165 MS.gene50548:CDS
ATCCCTAGTCAATTCCTTTA+CGG 0.281821 1.2:-54678565 None:intergenic
AGGAAATGCGCAACCTTATC+TGG 0.283971 1.2:+54684357 MS.gene50548:CDS
CTGGTGGTCAAGTTCTAAAT+TGG 0.286126 1.2:+54678631 MS.gene50548:CDS
AACCAACGCCACCACTTTGA+TGG 0.287978 1.2:-54684311 None:intergenic
GTGATGTTAGAGATGGTCTT+AGG 0.291313 1.2:+54687699 MS.gene50548:CDS
TCAATTCCTTTACATGATAC+TGG 0.307213 1.2:+54681538 MS.gene50548:CDS
GGCGGTTTGCCTCGCGTAAA+TGG 0.311764 1.2:+54678654 MS.gene50548:CDS
TTGGCGACGTGTTCTTTAAA+AGG 0.312314 1.2:+54678700 MS.gene50548:CDS
CCTCTTTATTAAAGCTATAT+AGG 0.315202 1.2:+54678460 MS.gene50548:CDS
TGGTCGTTGTACAAAATTAC+AGG 0.316460 1.2:-54681421 None:intergenic
CTTGGTGGAGGTTGGAAATA+GGG 0.316685 1.2:-54689858 None:intergenic
TTTCAGACATCTGGGCTTTA+CGG 0.320626 1.2:+54689388 MS.gene50548:CDS
TTGCTCAAGTCTTTCGTTCT+CGG 0.321277 1.2:-54684264 None:intergenic
AACTTGGTATCTGGCAGATT+AGG 0.330954 1.2:-54680508 None:intergenic
ATTCCACATATCTTGCAATA+TGG 0.333093 1.2:-54684142 None:intergenic
ATTCGCTTAAACTTGGTATC+TGG 0.334439 1.2:-54680517 None:intergenic
AGTCCCGGTCCAATGAAATA+TGG 0.334535 1.2:+54684171 MS.gene50548:CDS
TACTTCAAAGTTGAGCTTGA+TGG 0.339445 1.2:-54687523 None:intergenic
GGCAGCAGTTGTTGTTCCTT+TGG 0.345529 1.2:+54679252 MS.gene50548:CDS
AAGCATTTATATGCTTCTAC+TGG 0.351239 1.2:+54687331 MS.gene50548:CDS
AAGTGCTTTCTAATCATGTT+TGG 0.353454 1.2:-54676579 None:intergenic
ATAAAACTGGCAAAGCCTTC+AGG 0.357027 1.2:-54681502 None:intergenic
ACTTGGTATCTGGCAGATTA+GGG 0.357697 1.2:-54680507 None:intergenic
GGCTGCCAATCAGTCACTTC+TGG 0.361010 1.2:-54679031 None:intergenic
AGATAAATTTACCTTGAATC+AGG 0.361118 1.2:-54681592 None:intergenic
GATTCCTGCAGACCAAATAA+TGG 0.365171 1.2:-54679340 None:intergenic
TAGCTATCGTTAGCAGTTAG+AGG 0.367958 1.2:-54679052 None:intergenic
AAAGGGCAGTATGGACAATA+TGG 0.370563 1.2:+54679231 MS.gene50548:CDS
ATAAATAGTTTACCGGGAAA+TGG 0.373233 1.2:-54676852 None:intergenic
CACGTGTTAAAGCATTTATC+TGG 0.375022 1.2:-54687737 None:intergenic
AGGATTTATGCATTGGTCAT+TGG 0.376552 1.2:-54681482 None:intergenic
TGGTGGTCAAGTTCTAAATT+GGG 0.378816 1.2:+54678632 MS.gene50548:CDS
GATCTTCGCATTCCATTTCC+CGG 0.384363 1.2:+54676840 MS.gene50548:CDS
AAGCACTTCTTCATCGCGTT+AGG 0.394880 1.2:+54676498 MS.gene50548:CDS
AAGCACTTCTTCATCGCGTT+AGG 0.394880 1.2:+54676594 MS.gene50548:CDS
TCAGGTGAAAACAGAAGTTT+TGG 0.396522 1.2:-54681441 None:intergenic
CACAATTATCTTCTTGGTGG+AGG 0.397522 1.2:-54689870 None:intergenic
GGAAGTTGTGGTTGGGATTG+TGG 0.398144 1.2:+54677173 MS.gene50548:CDS
ATTATTCAATGCCTGATTCA+AGG 0.401088 1.2:+54681581 MS.gene50548:CDS
TAGTGCGCCATCTGCTTATG+TGG 0.402017 1.2:+54689412 MS.gene50548:CDS
AGTGCTTTCTAATCATGTTT+GGG 0.402637 1.2:-54676578 None:intergenic
TACCAAGTTTAAGCGAATAA+TGG 0.403865 1.2:+54680522 MS.gene50548:CDS
ATGATACTGGTTCAGATAAC+AGG 0.403949 1.2:+54681551 MS.gene50548:CDS
AGCCTTGGAGTCTCCAATAT+TGG 0.405985 1.2:-54678191 None:intergenic
TCTAGGAATAACCTTCATTC+AGG 0.406387 1.2:+54678121 MS.gene50548:CDS
TGCTTTGAAGATCCAGAGTC+AGG 0.410523 1.2:+54685949 MS.gene50548:CDS
CGTATTATTGACTTTGGAAG+TGG 0.414780 1.2:+54687289 MS.gene50548:CDS
TATGTATTAAAGAGGAGTTT+TGG 0.415898 1.2:+54681854 MS.gene50548:CDS
GTAGCATTTAGCAAAGCTTC+AGG 0.416085 1.2:-54687487 None:intergenic
ATCTACAGCAACAGTTGTAT+TGG 0.416406 1.2:+54678144 MS.gene50548:CDS
TCGACAGGAACATTGCTTCA+TGG 0.419963 1.2:+54677318 MS.gene50548:CDS
CTCAAGTAATCCTGAGTGTC+AGG 0.422575 1.2:+54681979 MS.gene50548:CDS
TTCAAGAAGACCAATAAAAC+TGG 0.423014 1.2:-54681515 None:intergenic
TTTCCCATTATTTGGTCTGC+AGG 0.423374 1.2:+54679336 MS.gene50548:CDS
GTTCTTTCATCCTCTCTGTC+TGG 0.423470 1.2:-54678594 None:intergenic
CTAGAGATCCTCTTAAAATA+GGG 0.423911 1.2:+54689261 MS.gene50548:CDS
CATAGACGGAAAGAGATGTT+AGG 0.425807 1.2:+54677369 MS.gene50548:CDS
CGGCAAAATTAGTGAGCCCT+TGG 0.426084 1.2:-54678545 None:intergenic
GAATACAAGCCATATTTCAT+TGG 0.428140 1.2:-54684180 None:intergenic
TTGGCTATAACACGGGCTAT+TGG 0.432011 1.2:+54678681 MS.gene50548:CDS
GAATTCTTCAGAGCATTTCC+AGG 0.434830 1.2:-54689219 None:intergenic
AAGACTTGAGCAAGTGAAAC+AGG 0.436937 1.2:+54684274 MS.gene50548:CDS
GAAGGGCGTCTGGTATAGGC+TGG 0.439158 1.2:-54681246 None:intergenic
GATGTTTGATTAGGTGCAAT+GGG 0.439760 1.2:+54677144 MS.gene50548:intron
TACCATTATTCGCTTAAACT+TGG 0.442960 1.2:-54680524 None:intergenic
CTGCACAATTATCTTCTTGG+TGG 0.445189 1.2:-54689873 None:intergenic
CTAAATGCTACATGGTATCA+AGG 0.445631 1.2:+54687499 MS.gene50548:CDS
CGACAGGAACATTGCTTCAT+GGG 0.445851 1.2:+54677319 MS.gene50548:CDS
AGCCTTCAGGATTTATGCAT+TGG 0.450173 1.2:-54681489 None:intergenic
TGTAGGCGTATTATTGACTT+TGG 0.450655 1.2:+54687283 MS.gene50548:intron
GTGGATCATATGGTGAAGTA+TGG 0.450731 1.2:+54681879 MS.gene50548:CDS
GCTTACCAGCTTGTTGATGA+AGG 0.452050 1.2:-54681264 None:intergenic
AGCGCCACCGTGTTTGTAAA+CGG 0.454314 1.2:-54676676 None:intergenic
TTTGAAGATGTGCTGTTGGC+TGG 0.454563 1.2:+54684020 MS.gene50548:CDS
CGCAATGCCTCGTCAACACT+TGG 0.455029 1.2:-54689831 None:intergenic
TTCAAGCATCTCCCTGACTC+TGG 0.456959 1.2:-54685961 None:intergenic
ATTATCTTCTTGGTGGAGGT+TGG 0.459012 1.2:-54689866 None:intergenic
TCAGAGCATTTCCAGGATGC+AGG 0.459218 1.2:-54689212 None:intergenic
ATGTACAGGGTGTAGTTAGA+AGG 0.459269 1.2:-54682007 None:intergenic
ATTCCTGCAGACCAAATAAT+GGG 0.461614 1.2:-54679339 None:intergenic
TTCTCACCTTTAGCCTCCTT+AGG 0.462469 1.2:-54678241 None:intergenic
CTGGCAGATTAGGGTGCTCC+AGG 0.462532 1.2:-54680498 None:intergenic
GGGATTAAGGAAGTTGTGGT+TGG 0.467601 1.2:+54677165 MS.gene50548:CDS
CCTATATAGCTTTAATAAAG+AGG 0.469166 1.2:-54678460 None:intergenic
AGAAAATCTTGGTGATTTGG+TGG 0.474744 1.2:+54681168 MS.gene50548:CDS
TGGGAAGCATGTGGATGATT+CGG 0.474830 1.2:-54676559 None:intergenic
CTGATCTCATGTCACATAAA+CGG 0.475305 1.2:-54679150 None:intergenic
GCGCAACCTTATCTGGCAAC+TGG 0.476012 1.2:+54684364 MS.gene50548:CDS
GATGGCGTCAAAATTATTGA+TGG 0.476159 1.2:+54677233 MS.gene50548:CDS
CGACAGACTTAGATCGTTCA+TGG 0.476521 1.2:+54688143 MS.gene50548:intron
GGTTAAGCATGTGGATGATT+CGG 0.477227 1.2:-54676655 None:intergenic
AACTGCTAACGATAGCTACT+TGG 0.481960 1.2:+54679057 MS.gene50548:CDS
GAATTGTGCATCTTAATCCC+TGG 0.482370 1.2:+54688165 MS.gene50548:CDS
TGATGAAGGGCGTCTGGTAT+AGG 0.488609 1.2:-54681250 None:intergenic
TTGGAGTTTCGCCTGCATCC+TGG 0.489711 1.2:+54689201 MS.gene50548:CDS
GGGTCTGCTGTGTACTTAAG+TGG 0.490131 1.2:+54683948 MS.gene50548:CDS
AATTGTGCATCTTAATCCCT+GGG 0.493692 1.2:+54688166 MS.gene50548:CDS
GCATCTTGAGGGCTGGAATG+AGG 0.494687 1.2:+54687773 MS.gene50548:CDS
AGCACTTCTTCATCGCGTTA+GGG 0.496565 1.2:+54676499 MS.gene50548:CDS
AGCACTTCTTCATCGCGTTA+GGG 0.496565 1.2:+54676595 MS.gene50548:CDS
GCTTGTTGATGAAGGGCGTC+TGG 0.496763 1.2:-54681256 None:intergenic
TTCAGAGCACAAGAAAGCCT+TGG 0.496817 1.2:-54678206 None:intergenic
TGGCTTGTATTCAGTTATGA+AGG 0.497253 1.2:+54684191 MS.gene50548:CDS
CTGCACCAGAAGTGACTGAT+TGG 0.497735 1.2:+54679026 MS.gene50548:CDS
GAACCATATTGCAAGATATG+TGG 0.497814 1.2:+54684139 MS.gene50548:CDS
TGGATCGGCATCTTGAGGGC+TGG 0.499128 1.2:+54687766 MS.gene50548:CDS
GACATACCAGTTGCCAGATA+AGG 0.499331 1.2:-54684370 None:intergenic
TACTTGGTGGCTGCATCTGA+TGG 0.499430 1.2:+54679073 MS.gene50548:CDS
GAATCTGCTTACAGAAGCTC+AGG 0.499613 1.2:+54679358 MS.gene50548:CDS
TTATACGTTTCAAAATGTAC+AGG 0.500478 1.2:-54682021 None:intergenic
CACCTCTGATCGATTGCACC+TGG 0.502161 1.2:+54680480 MS.gene50548:CDS
TGATGTTAGAGATGGTCTTA+GGG 0.503989 1.2:+54687700 MS.gene50548:CDS
TGTACTGAACAGGTAGAGAA+AGG 0.507240 1.2:+54683927 MS.gene50548:intron
TGGTTGAAAACAACAGAAGA+AGG 0.507783 1.2:+54684329 MS.gene50548:CDS
CTTACCAGCTTGTTGATGAA+GGG 0.508147 1.2:-54681263 None:intergenic
GGATTAAGGAAGTTGTGGTT+GGG 0.510198 1.2:+54677166 MS.gene50548:CDS
CATCTTGAGGGCTGGAATGA+GGG 0.512226 1.2:+54687774 MS.gene50548:CDS
TGGTCAGTTGGCTATAACAC+GGG 0.512647 1.2:+54678674 MS.gene50548:CDS
GAGTAGCTGCCAGAAACCCC+AGG 0.513588 1.2:-54688183 None:intergenic
CTTCATTGATAGTTGAACTC+AGG 0.513812 1.2:-54681459 None:intergenic
AGGGGATTGTTGCGGAGAGG+AGG 0.515331 1.2:-54676527 None:intergenic
AGGGGATTGTTGCGGAGAGG+AGG 0.515331 1.2:-54676623 None:intergenic
GTGCTTTGAAGATGTGCTGT+TGG 0.522383 1.2:+54684016 MS.gene50548:CDS
TTACAAACACGGTGGCGCTC+CGG 0.522526 1.2:+54676680 MS.gene50548:CDS
TGCGGAGTGGCAACGAGTGG+TGG 0.524470 1.2:-54676766 None:intergenic
CAGTCTCCTAAGGAGGCTAA+AGG 0.524953 1.2:+54678235 MS.gene50548:CDS
GTCCATCAAAGTGGTGGCGT+TGG 0.525148 1.2:+54684309 MS.gene50548:CDS
CAAAACAAATTTCGACTGCA+AGG 0.529137 1.2:+54684095 MS.gene50548:CDS
TTGCCGTAAAGGAATTGACT+AGG 0.531885 1.2:+54678562 MS.gene50548:CDS
GCCTCGCGTAAATGGTCAGT+TGG 0.533001 1.2:+54678662 MS.gene50548:CDS
TTGAGCAAGTGAAACAGGTT+CGG 0.533800 1.2:+54684279 MS.gene50548:CDS
GTGATTTGGTGGATTCTAAG+TGG 0.534844 1.2:+54681179 MS.gene50548:CDS
TGATGTTTGATTAGGTGCAA+TGG 0.535874 1.2:+54677143 MS.gene50548:intron
TGCTTAACCGTTTACAAACA+CGG 0.536233 1.2:+54676669 MS.gene50548:CDS
TGCCGTAAAGGAATTGACTA+GGG 0.538228 1.2:+54678563 MS.gene50548:CDS
TGAGCAATAAGATACCTAGA+AGG 0.538448 1.2:-54687355 None:intergenic
AAACTATGAAGGAAGCCTCT+AGG 0.538727 1.2:+54678104 MS.gene50548:intron
GGCAAAATTAGTGAGCCCTT+GGG 0.540691 1.2:-54678544 None:intergenic
TACAGATTAGCTTCTTCCCA+AGG 0.542089 1.2:+54678528 MS.gene50548:CDS
AGAACTCGTGTGGAAGCTGC+TGG 0.542286 1.2:+54678612 MS.gene50548:CDS
TGGCAACGAGTGGTGGATTG+AGG 0.546080 1.2:-54676759 None:intergenic
TGATGGTTCTGTTTCTGTGT+GGG 0.546242 1.2:+54678494 MS.gene50548:CDS
CAAGCCATATTTCATTGGAC+CGG 0.546801 1.2:-54684175 None:intergenic
ATCATATGGTGAAGTATGGT+TGG 0.546846 1.2:+54681883 MS.gene50548:CDS
CTGTGTACTTAAGTGGGCTG+AGG 0.547798 1.2:+54683955 MS.gene50548:CDS
TTTGGGGATTGGAACACCGC+CGG 0.552404 1.2:-54676699 None:intergenic
TCTGAACCAGTATCATGTAA+AGG 0.554413 1.2:-54681544 None:intergenic
CCATCTGCTTATGTGGGACC+CGG 0.555390 1.2:+54689419 MS.gene50548:CDS
AGATGTCTGTGATTTGTTGT+GGG 0.556957 1.2:+54679120 MS.gene50548:CDS
ATGTAAACGTATTGCATAGA+CGG 0.557005 1.2:+54677355 MS.gene50548:CDS
TGCTAACGATAGCTACTTGG+TGG 0.559456 1.2:+54679060 MS.gene50548:CDS
AAGATGTCTGTGATTTGTTG+TGG 0.560429 1.2:+54679119 MS.gene50548:CDS
GTTATATCGAAAGCTTCGAC+AGG 0.561902 1.2:+54677303 MS.gene50548:CDS
CAAGGAGCCATATATGAAGA+AGG 0.563211 1.2:+54684113 MS.gene50548:CDS
TACACTGAAAACGAGGATGC+AGG 0.564296 1.2:+54679313 MS.gene50548:CDS
AAGGGCGTCTGGTATAGGCT+GGG 0.568647 1.2:-54681245 None:intergenic
CAGCACATCTTCAAAGCACA+TGG 0.569088 1.2:-54684012 None:intergenic
TCGATCAGAGGTGATACCAT+TGG 0.570089 1.2:-54680470 None:intergenic
GTACTGAACAGGTAGAGAAA+GGG 0.572856 1.2:+54683928 MS.gene50548:intron
TGCCAATATTGGAGACTCCA+AGG 0.573506 1.2:+54678189 MS.gene50548:CDS
GATGATTCGGCGTGAGTGAA+GGG 0.573961 1.2:-54676546 None:intergenic
GATGATTCGGCGTGAGTGAA+GGG 0.573961 1.2:-54676642 None:intergenic
CAAACACGGTGGCGCTCCGG+CGG 0.574240 1.2:+54676683 MS.gene50548:CDS
TGGTGTTGTGATGTTAGAGA+TGG 0.574267 1.2:+54687692 MS.gene50548:CDS
GAATGAGGGTGTGAAGGAGC+TGG 0.574520 1.2:+54687788 MS.gene50548:CDS
TGCCACTCCGCAATGCTCCA+AGG 0.577663 1.2:+54676777 MS.gene50548:CDS
GTGATCGAAGAGGTTCCAGC+GGG 0.578336 1.2:-54676727 None:intergenic
TGTGCAGGTATGTATTAAAG+AGG 0.587658 1.2:+54681846 MS.gene50548:intron
AAGCCATATTTCATTGGACC+GGG 0.588357 1.2:-54684174 None:intergenic
GACGGAAAGAGATGTTAGGT+TGG 0.594701 1.2:+54677373 MS.gene50548:CDS
AAGCTTTGCTAAATGCTACA+TGG 0.595339 1.2:+54687491 MS.gene50548:CDS
ACAGATTAGCTTCTTCCCAA+GGG 0.596152 1.2:+54678529 MS.gene50548:CDS
AACAACAGAAGAAGGGCAAG+AGG 0.596199 1.2:+54684337 MS.gene50548:CDS
TTTCATTGGAATTGTAACCA+AGG 0.599457 1.2:+54681908 MS.gene50548:CDS
GACGCCCTTCATCAACAAGC+TGG 0.601076 1.2:+54681259 MS.gene50548:CDS
GGTGGTCAAGTTCTAAATTG+GGG 0.601878 1.2:+54678633 MS.gene50548:CDS
TGAAGGGGATTGTTGCGGAG+AGG 0.603256 1.2:-54676530 None:intergenic
TGAAGGGGATTGTTGCGGAG+AGG 0.603256 1.2:-54676626 None:intergenic
GACCAATGCATAAATCCTGA+AGG 0.603749 1.2:+54681487 MS.gene50548:CDS
AGTGCGCCATCTGCTTATGT+GGG 0.605908 1.2:+54689413 MS.gene50548:CDS
CCGGGTCCCACATAAGCAGA+TGG 0.610347 1.2:-54689419 None:intergenic
GAAGGACCATCCTGACACTC+AGG 0.611190 1.2:-54681989 None:intergenic
TAAATGCTACATGGTATCAA+GGG 0.615134 1.2:+54687500 MS.gene50548:CDS
TAATGAATAAGAAGATGAAG+AGG 0.616048 1.2:-54679179 None:intergenic
AGCATTTATATGCTTCTACT+GGG 0.617258 1.2:+54687332 MS.gene50548:CDS
TCTTCGACCTTGGAGCATTG+CGG 0.617385 1.2:-54676784 None:intergenic
CTCCAGGTGCAATCGATCAG+AGG 0.618244 1.2:-54680482 None:intergenic
TTTGTAAACGGTTAAGCATG+TGG 0.619327 1.2:-54676664 None:intergenic
AGTAATCCTGAGTGTCAGGA+TGG 0.619635 1.2:+54681983 MS.gene50548:CDS
GAAGATTTGAAAGATTCCAA+AGG 0.620873 1.2:-54679268 None:intergenic
AGGGCGTCTGGTATAGGCTG+GGG 0.621091 1.2:-54681244 None:intergenic
AGAGGATGAAAGAACTCGTG+TGG 0.621867 1.2:+54678602 MS.gene50548:CDS
GGTCTGCTGTGTACTTAAGT+GGG 0.623133 1.2:+54683949 MS.gene50548:CDS
GGTCGTTGTACAAAATTACA+GGG 0.623669 1.2:-54681420 None:intergenic
CGGTGCGGAAGCTAGTGAGA+TGG 0.625186 1.2:+54677215 MS.gene50548:CDS
GGATGATTCGGCGTGAGTGA+AGG 0.625250 1.2:-54676547 None:intergenic
GGATGATTCGGCGTGAGTGA+AGG 0.625250 1.2:-54676643 None:intergenic
AGGTCGAAGAAAATCTCAAG+AGG 0.625421 1.2:+54676797 MS.gene50548:CDS
GGGCTGGAATGAGGGTGTGA+AGG 0.627190 1.2:+54687782 MS.gene50548:CDS
TTGCTGTAGATCCTGAATGA+AGG 0.628923 1.2:-54678132 None:intergenic
GGTTGAAAACAACAGAAGAA+GGG 0.630216 1.2:+54684330 MS.gene50548:CDS
TATCCCTGTGTGTGATATTG+CGG 0.631016 1.2:-54685374 None:intergenic
ACACACAGGGATATTAAACC+TGG 0.631661 1.2:+54685384 MS.gene50548:CDS
ATGATTCGGCGTGAGTGAAG+GGG 0.632437 1.2:-54676545 None:intergenic
ATGATTCGGCGTGAGTGAAG+GGG 0.632437 1.2:-54676641 None:intergenic
GATCGAAGAGGTTCCAGCGG+GGG 0.633018 1.2:-54676725 None:intergenic
AATGGGGATTAAGGAAGTTG+TGG 0.634124 1.2:+54677161 MS.gene50548:CDS
AGTTGTGGTTGGGATTGTGG+CGG 0.635560 1.2:+54677176 MS.gene50548:CDS
GCTATTACAGGTATGACATG+TGG 0.637987 1.2:+54687664 MS.gene50548:intron
CATTGCGGAGTGGCAACGAG+TGG 0.639290 1.2:-54676769 None:intergenic
TGAATGAAGGTTATTCCTAG+AGG 0.639688 1.2:-54678119 None:intergenic
GCTTTGAAGATCCAGAGTCA+GGG 0.642490 1.2:+54685950 MS.gene50548:CDS
TGAATGAACTGCATTCTGAA+AGG 0.646082 1.2:+54677400 MS.gene50548:CDS
GTGAGTGAAGGGGATTGTTG+CGG 0.646562 1.2:-54676535 None:intergenic
GTGAGTGAAGGGGATTGTTG+CGG 0.646562 1.2:-54676631 None:intergenic
ATTGTGCATCTTAATCCCTG+GGG 0.647262 1.2:+54688167 MS.gene50548:CDS
AGTAGCTGCCAGAAACCCCA+GGG 0.648173 1.2:-54688182 None:intergenic
GACCTTGGAGCATTGCGGAG+TGG 0.648976 1.2:-54676779 None:intergenic
AGGTATGACATGTGGAGTGT+TGG 0.649398 1.2:+54687672 MS.gene50548:intron
CGACCGCAATATCACACACA+GGG 0.649899 1.2:+54685371 MS.gene50548:CDS
AATCATGTTTGGGAAGCATG+TGG 0.651635 1.2:-54676568 None:intergenic
ATGGTCAGTTGGCTATAACA+CGG 0.652150 1.2:+54678673 MS.gene50548:CDS
TGATAGGTTGAAGTGAAACA+TGG 0.652421 1.2:+54681121 MS.gene50548:intron
GGTCAAGTTCTAAATTGGGG+CGG 0.652501 1.2:+54678636 MS.gene50548:CDS
TACTACGTCCATCAAAGTGG+TGG 0.655382 1.2:+54684303 MS.gene50548:CDS
GCATTTAGCAAAGCTTCAGG+AGG 0.661051 1.2:-54687484 None:intergenic
GTGATGGTTCTGTTTCTGTG+TGG 0.661246 1.2:+54678493 MS.gene50548:CDS
GGATCGGCCAAGTGTTGACG+AGG 0.662296 1.2:+54689824 MS.gene50548:CDS
GGATACTACGTCCATCAAAG+TGG 0.662788 1.2:+54684300 MS.gene50548:CDS
TATACGTTTCAAAATGTACA+GGG 0.664830 1.2:-54682020 None:intergenic
TATAGGCAGACAGAGCGTGA+TGG 0.668590 1.2:+54678477 MS.gene50548:CDS
GACGAGAATTGTGATCGAAG+AGG 0.668622 1.2:-54676737 None:intergenic
TGTGATCGAAGAGGTTCCAG+CGG 0.668743 1.2:-54676728 None:intergenic
ACTCGTGTGGAAGCTGCTGG+TGG 0.671105 1.2:+54678615 MS.gene50548:CDS
TGTGTACTTAAGTGGGCTGA+GGG 0.679721 1.2:+54683956 MS.gene50548:CDS
ACGACCGCAATATCACACAC+AGG 0.685103 1.2:+54685370 MS.gene50548:CDS
GCCAACTGACCATTTACGCG+AGG 0.686631 1.2:-54678663 None:intergenic
ATGTTTGATTAGGTGCAATG+GGG 0.693914 1.2:+54677145 MS.gene50548:intron
GGATCATCATCCAGACAGAG+AGG 0.695616 1.2:+54678584 MS.gene50548:CDS
AAGAAGCTACACTGAAAACG+AGG 0.698930 1.2:+54679306 MS.gene50548:CDS
GAAATGGAATGCGAAGATCG+AGG 0.704163 1.2:-54676836 None:intergenic
TTTCGATGGTCATAACGGTG+CGG 0.715714 1.2:+54677200 MS.gene50548:CDS
CACATCTTCAAAGCACATGG+AGG 0.716246 1.2:-54684009 None:intergenic
CAAGTGTTGACGAGGCATTG+CGG 0.724863 1.2:+54689832 MS.gene50548:CDS
TGATCGAAGAGGTTCCAGCG+GGG 0.731401 1.2:-54676726 None:intergenic
TTAACCGTTTACAAACACGG+TGG 0.787662 1.2:+54676672 MS.gene50548:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.2 gene 54676489 54689887 54676489 ID=MS.gene50548
chr1.2 mRNA 54676489 54689887 54676489 ID=MS.gene50548.t1;Parent=MS.gene50548
chr1.2 exon 54676489 54676861 54676489 ID=MS.gene50548.t1.exon1;Parent=MS.gene50548.t1
chr1.2 CDS 54676489 54676861 54676489 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54677157 54677421 54677157 ID=MS.gene50548.t1.exon2;Parent=MS.gene50548.t1
chr1.2 CDS 54677157 54677421 54677157 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54677915 54678020 54677915 ID=MS.gene50548.t1.exon3;Parent=MS.gene50548.t1
chr1.2 CDS 54677915 54678020 54677915 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54678115 54678256 54678115 ID=MS.gene50548.t1.exon4;Parent=MS.gene50548.t1
chr1.2 CDS 54678115 54678256 54678115 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54678460 54678721 54678460 ID=MS.gene50548.t1.exon5;Parent=MS.gene50548.t1
chr1.2 CDS 54678460 54678721 54678460 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54679012 54679379 54679012 ID=MS.gene50548.t1.exon6;Parent=MS.gene50548.t1
chr1.2 CDS 54679012 54679379 54679012 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54680470 54680543 54680470 ID=MS.gene50548.t1.exon7;Parent=MS.gene50548.t1
chr1.2 CDS 54680470 54680543 54680470 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54681127 54681280 54681127 ID=MS.gene50548.t1.exon8;Parent=MS.gene50548.t1
chr1.2 CDS 54681127 54681280 54681127 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54681410 54681602 54681410 ID=MS.gene50548.t1.exon9;Parent=MS.gene50548.t1
chr1.2 CDS 54681410 54681602 54681410 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54681853 54682045 54681853 ID=MS.gene50548.t1.exon10;Parent=MS.gene50548.t1
chr1.2 CDS 54681853 54682045 54681853 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54683939 54684385 54683939 ID=MS.gene50548.t1.exon11;Parent=MS.gene50548.t1
chr1.2 CDS 54683939 54684385 54683939 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54685348 54685405 54685348 ID=MS.gene50548.t1.exon12;Parent=MS.gene50548.t1
chr1.2 CDS 54685348 54685405 54685348 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54685935 54686022 54685935 ID=MS.gene50548.t1.exon13;Parent=MS.gene50548.t1
chr1.2 CDS 54685935 54686022 54685935 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54687288 54687362 54687288 ID=MS.gene50548.t1.exon14;Parent=MS.gene50548.t1
chr1.2 CDS 54687288 54687362 54687288 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54687459 54687542 54687459 ID=MS.gene50548.t1.exon15;Parent=MS.gene50548.t1
chr1.2 CDS 54687459 54687542 54687459 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54687674 54687817 54687674 ID=MS.gene50548.t1.exon16;Parent=MS.gene50548.t1
chr1.2 CDS 54687674 54687817 54687674 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54688149 54688230 54688149 ID=MS.gene50548.t1.exon17;Parent=MS.gene50548.t1
chr1.2 CDS 54688149 54688230 54688149 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54689200 54689282 54689200 ID=MS.gene50548.t1.exon18;Parent=MS.gene50548.t1
chr1.2 CDS 54689200 54689282 54689200 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54689386 54689440 54689386 ID=MS.gene50548.t1.exon19;Parent=MS.gene50548.t1
chr1.2 CDS 54689386 54689440 54689386 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
chr1.2 exon 54689822 54689887 54689822 ID=MS.gene50548.t1.exon20;Parent=MS.gene50548.t1
chr1.2 CDS 54689822 54689887 54689822 ID=cds.MS.gene50548.t1;Parent=MS.gene50548.t1
Gene Sequence

>MS.gene50548

ATGATTAGAAAGCACTTCTTCATCGCGTTAGGGTTTCTCCTCCTCTCCGCAACAATCCCCTTCACTCACGCCGAATCATCCACATGCTTCCCAAACATGATTAGAAAGCACTTCTTCATCGCGTTAGGGTTTCTCCTCCTCTCCGCAACAATCCCCTTCACTCACGCCGAATCATCCACATGCTTAACCGTTTACAAACACGGTGGCGCTCCGGCGGTGTTCCAATCCCCAAAATGCCCCCGCTGGAACCTCTTCGATCACAATTCTCGTCCTCAATCCACCACTCGTTGCCACTCCGCAATGCTCCAAGGTCGAAGAAAATCTCAAGAGGATCGCACTCTCTGCGTCCTCGATCTTCGCATTCCATTTCCCGGTAAACTATTTATTTGACGTAATAGTTAATTACAGTAATCAGTTATAGTTAAGTTTCATCGGAAGAGTTAGTTACGATAATTCGTCACAGTGATTAGATAAGTTTCATAATATAGTTAATTACAATAATCAGTTACACTAGTTAGTTGAGTTTCATTGGAAGAGTTAGTTACAATAATTAATTACTGTAATTAGATAAATTTCACAATAATTAGTTACAATAATTAGTTACAGTGGTTAGTTAAGTTTTGTTCGCAAGAGTTAGTTATAATTTTATGTGTTTGATGTTTGATTAGGTGCAATGGGGATTAAGGAAGTTGTGGTTGGGATTGTGGCGGTTTTCGATGGTCATAACGGTGCGGAAGCTAGTGAGATGGCGTCAAAATTATTGATGGAGTATTTTGTTCTTCATACTTATTTTCTTCTTGATGCTACGTATTCTGTTATATCGAAAGCTTCGACAGGAACATTGCTTCATGGGAAAGATCATGATCATGTAAACGTATTGCATAGACGGAAAGAGATGTTAGGTTGGCAATTGAATGAACTGCATTCTGAAAGGTGCTTTTGCAATTGCATCTATAGTTTTAGTTTTTGTTAATAGATAATTGGTGAAAGGTGTTTCTGTATATCTAGTATTGTTGATCAAAGGTTGAGTATATAGTTTATTAAGAAGCACTGACACAAAGACGAACACATCAACTCTAGTAATAATTTGAGAAAATAACATAATTGAATGTAATCACATGTGTAAGTGTCGGACTCCGAACTTGCGTTCGATCAGAAGCATCAGTGCTACAGTGTTTATTATGAATGATTGGTTTTATGTAGAGCTGTGAATGTCAGTGACATGTTAGTGCTTTTCTAACAATGAATGTGTGTCAGTTAGAAATGCGTAATCAGGTACATAGCGTTTTGAATGTCAATTATGAATGATTGTTTTGTTGGTGTACAAGTGTGCTAAGTGTTTCAGTTTTCAAACAGCATTTAGTTTTACATTAATTCCATTTCTCACATTTGTATGTCTATATCTCAACTAAAAAAACCTTTCCAGGTTGCAGAATACATTTTCTGCTAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAAGAAGCATTGTTGAGAGCAATTCATGATATTGATGAAAAGTTTTCTGAGGTAAGTTTGACTTTCTGTTCAATTTTACAAAAACTTCATTTGGTACTTTTTTGTATGTGTTCTTGTATTGACATCTTTCAATTAAACTATGAAGGAAGCCTCTAGGAATAACCTTCATTCAGGATCTACAGCAACAGTTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCTCCTAAGGAGGCTAAAGGTGAGAAAGATTATAAAATATAACCAAACTTCCATTGTTAAAAGATATAAGTTTATCATGGCAATATTAGGATATTGTATGTTATTCTTTTGTCTAAATATATCAGTATTATATAATGCGTGGTTATGATAATGTGACCAGCATACTTTTTATTGAAATGAAACACGACTATAAGGTTGTTAATTTCAATTTTTTGTTTGTAGCCTCTTTATTAAAGCTATATAGGCAGACAGAGCGTGATGGTTCTGTTTCTGTGTGGGATCGTGAAAAGTACAGATTAGCTTCTTCCCAAGGGCTCACTAATTTTGCCGTAAAGGAATTGACTAGGGATCATCATCCAGACAGAGAGGATGAAAGAACTCGTGTGGAAGCTGCTGGTGGTCAAGTTCTAAATTGGGGCGGTTTGCCTCGCGTAAATGGTCAGTTGGCTATAACACGGGCTATTGGCGACGTGTTCTTTAAAAGGTAGGTTCGGCGGAAATCATTTTCATAAACTCCAAGCCAATATCAACTTATCAAGTGTATCTGCAGCCTTATGTCATGTGCAAGGCGGTTCGTGTTTAGATACAAATTTAAACCAAGTCTCATTCTTAAATTAAGATTAAATTGCAAAATGGTAGGGAAGGACATGTGCTTTCTTCAAAACCAAAGCACTAATGCGTGTGGGGCTAATAATTTAAAATTTCAGGGTGACTGGTTTCTTAACAATTATGTGTTGAAATTGTAACACTTTTCTCATAATGAACTTTCAACAGTTATGGAGTTGTATCTGCACCAGAAGTGACTGATTGGCAGCCTCTAACTGCTAACGATAGCTACTTGGTGGCTGCATCTGATGGAGTCTTTGAGAAGTTGAGTGTGCAAGATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTATGTGACATGAGATCAGATTGCACCTCTTCATCTTCTTATTCATTAGCAGATTTTATTATTAATACTGCCTTAAAAAAGGGCAGTATGGACAATATGGCAGCAGTTGTTGTTCCTTTGGAATCTTTCAAATCTTCTGCTAACTCGCTTAGAAGAAGCTACACTGAAAACGAGGATGCAGGTTTCCCATTATTTGGTCTGCAGGAATCTGCTTACAGAAGCTCAGGTATGTTTCATGGGTTTAAACAATGAGCTTCATATGTAGAGTTCAAGATACATTACCTCAAGATTTCCTCCCTATGATGATTGCTAATGCATATCAGTTTATACATAATGAATTGAATGTATATGGTATAATCAACAAGGTTTGGTTCATTTTTTCTCATTTAACAGGAAATTAATGTATATACTATTACTCTGACCTCTCCTGCAGTTTTCAAATCCTTTGCTTCACTGCACGAATTACCCCCATGTTATAATTATTCCATATGCCTACTGCTCCTTCACACAAACTTTAAAATTTTACTCGGATGAGTTTTCTAAGTATCACAAACTTCAAGTAAAGTCAATTTTTAAAAAAGGAAAATTATTAAGAAGAGGAAAAATATTACGAAGATAAAGAAGGATGATCCTAACTCCTAAGCAAAACAATATAAAAAAAATCAAGAAAAAAGCCAAAATATATTCTAGCAGTAACAGTTAGGGAAGAACTAAAGAACACGGGAGCATGGCAGTAGCAATTGGGGAAAAAAGCACACAAGAAGTAGGGTATATGACTGGCTGACAGTCACGGGAATACCTAAAGAAGATAGGGGGAAAAACATGAAAGGATGGAACTTTGGATTCAAAGACGGGTACTCTTAAAAAAAGCTCAGTAAAAGCTATCAAGAAGGTCCTCCCAACACCTTTTTAAAAGATCCTTTTATTTAGTTTTGCATCTAAGAAAGAGATAAATCTTTGGCCCAGCTTCGTTAAGGAGAAGAGATGCAAAAAGAAAAAAAAGGTCAGGCCGAACAAGCTCTGTGTGACATGTGCACAGAGATGCACATAATAGGCATGCTATATGTGCTCATTTTACTTATCGACGCAGTGTTACAAAATTATCTTTTCTAGATGCTACATTTGGTGTTCATTTGTATGTAACAATTGCTTATGTGATGTTTAAATTCAATGAAAAAAAAAAAAATTATCCAAGTTCTATGCTCGGACAGAAACTTAAATGATCACTAAATTTATTTAATCTGGTTGTTCCCTTATGTAGCTCGTGTTTTTTTATTGATTCTTATCAACTAATTTATTATTTGGAACTTACTCAGCCAATGGTATCACCTCTGATCGATTGCACCTGGAGCACCCTAATCTGCCAGATACCAAGTTTAAGCGAATAATGGTATGGCTGAAAGCCATCAGATTTATTATTGCTGATTTCTTTATTATTTTGTTTATGTCATAAATTGAATGTTTCTATGAAATTCAGGAATGCATTGATTTTTAAGAGCAGACTAATTGTATTTTGTCAATTTTAATAAAACTCTTGTATGATGACAATATATATTGTTTGGTGGTGGGGTGCATAAATAGTAGGCAAAAAAGTTGTATTCTTTATTTGAGACTAGGCAACAAAGTTTTTCTATGCACACAATTTGATTATTAATTTCTCATTTTTCCACTTTCTTTGTGATGAAATGTAATTTTTGGCCGATTTATTAGCATTTTTGGTTGAAACCAAACCAGTTAATCTATTGCCAAAAAGCAGTTATTTTTCTTTTGAAGTCCCATTTTTCACTGAGATACAGGTGTAAATTTTCAATTTTTGGGAATTTAATATCTTTATGTGTGTCCGCAAAACCAAATTTTCATCCTTGTCTATATGTTCTTTTAATATCATAATAAGTCATTGCACTTTGAAACAGAGAGATCCCTCTGATCAAAATTAATCTGAATAAATTCCTTCTGGTTTCCTTTTATGATAGGTTGAAGTGAAACATGGTGATTTTGGGTGTTTTTATTTATCAGAAAATCTTGGTGATTTGGTGGATTCTAAGTGGCTTGCCAAAAAAGATGACTGGGAAGACTATTTGTATGAACTACCCCAGCCTATACCAGACGCCCTTCATCAACAAGCTGGTAAGCGAAAATGTGATGCTATCTCTCATTATGTAATCTTTATGCACTTTTTAAGTTTATCTTAACTTACTGTCCTTATCTTACATTTTAGTTGACGATCAAATATACTTTGGTCGGTTCCTTTTTCAGTAGTAGATGGCCCTGTAATTTTGTACAACGACCAAAACTTCTGTTTTCACCTGAGTTCAACTATCAATGAAGCCAATGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCAGATAACAGGTCTTCTGATTATTCAATGCCTGATTCAAGGTAAATTTATCTGCTTTCAGTTTCTATGCAGTGATACATCTATAAGCCGATATATGGTTGCTAGTAAAAGACACAGGCAGTATCTCGACCAAAAGTTGATATTCCCTTGAGTGTGTTTTATCTGGATGGCCAGTACTATCACTGCCATTACGTGTTGTTGTATGAGCTGAGCTTTTTCCCCTGCAAATTTGATGCTTTAAGTGTATATCTTTAGCCCAACAACTGAGACAATGCGCATTTTGGTGTGCAGGTATGTATTAAAGAGGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAACCAAGGTAATATTACTGCAAAAATGAGCAAGGGTGACAATAATAGAAACAGCAGCTCAAGTAATCCTGAGTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAATACATTTGAATGAAGCAGAACTATTTTTAATGGTTTCGGTTTATCAGGATCTCTTTGGGTGTCATAAATTCATAATGCATTGTGAATTGTGAGAAAGAAGTATAAACCTATTTTATTACCACAACATAATTAATATGCAATAATTTTGTTGCCTTGCTGATTTGTACAAATTACGATCTGCACTCCCTGGGCTTTATTTAGAGGCTTGATATGTTTTTTCATCCCTATAAACATTTCTAGAAGTTGCGCATTGTGCGCTATGTGGATTATTTAGCCCAAGAGGGAGCTGCTCGCAGATGCGGAGACAATGGGCGGCCCCCTGGTGCCATGGTCACCCCCAAATTTTTTACTTTACTTAACACCCATATGTCAAACTACATCGAGGTCCCCTCGTAACACCACTCATGACATGATAGACAGATAGGATACAAACGTCTCTTCTCATTTTTTGTTCTCGCACAACCACCTTGTTCAATTTTTTCTTCCTTTGCTAGACTGCTACTGTGTGTATGTGTTTTTCTGAGTGGTTGTGACTTGTGAGTCGTTTGGTTTCTATCTCTTTTTTGTTATCACTGCTTTTCTTTAAAGTGAGGGTAGCTTTAGTCCTTTCATTTTTGTCTTGGTTTTTCAATAAGTTGTGGCTTCATGGGAAGCTATCCCGCCCATGTTTCTTTGTTTTTGTTGCTTCCATTCCTTCTTTTGTCTTTGTTGGTGCTTCTGATAATGCTTTTAATACCTTTTGAATATAAATTTTAAATTTGATTTTAACTTTAACTTTGATTTTTAATTTTATTTTGCTTGATTATTTTATTTCTATTTTAGATGACTAATTCATTATAATTTTTAAAAGCAGTACCTTTATTATTTTCCTTCTTTGCCTCCATCAAGTTCAAAGGCTGGCTCTGCCCCTGACAGCTTGCCTTATTCTATTAATTAATGGAGAATGTTAACCATTAATTAATTTGTCTTTCTTCAGCTTCTGTTGTGCACTTTGGGTCTGGTCCTCCTTTGATCCTTTCTCATTTCTCTCTGAAATTCGCCCAATCAAAAGAAAGGGGGATATGTGCATAGACTTGGTGCTCTGTTAAGAACCATAAGCAAGAAAATAGAAAAAAGTGAAGGAAGATGAGTGGGAAAATTTGTAGTGTCTGTGTCAAATGAAATTGAAATCTGAATTGAGTAACTGAACTGAATACTGTTAGGACTGGTATCTAAATCACTAGGATATACCGAATGTACTTGGATGGTATTGAGGAATCATCCTTGAAACAATGTTCCAAAGAGCAAAGATTATATACACACTGACAGGAAATTGAGCCCCTGCCCTCTCCTTAACCAAGCGGTTCCTTCTAAATAAATTCCTCCCTTAATTCAAATAACAAACTAGTGTATATAGTTACATCCATCATGTAATAAAACATAACTGACACAATTAACATATCTGTTCCTAAATAATAGCTACTACCGATAACATAATAACTGCCTAATAATATTTACTAATAAGAGGTTACACGGAAGGCCATTTATGGGGGAGAGAAGGAGAGAAACAGTTACAAATTGTTGAAACAAATTGCAACTGTTAGATTCTGTTAATAAGATAATCTCACCCACTAGAATCTTCTATGGTGAGTAACACCTATGTAAGCTGCATTGTTGTCTGATGAGGTCCAAGGCCCTAGTCCACAATATACAGAATAACACAAAGCTATCAACAGAAAACATAAAAGTTAAAACATAACAGAAAGCATAAGCTACACTTATCTCTAAAATGCTCTTTATCTTTTTTGCTTAGACTTTCTAAGGGGAAGTTTTTGTGTTCAGTAGGCACTGTATTTTTATTATACATATGTAAGCAGGTTATACAGATAACTCTTGATTGTACTGAACAGGTAGAGAAAGGGTCTGCTGTGTACTTAAGTGGGCTGAGGGAAAAACATTTTGGAGAAATTTTCTTAAATGCCTCCATGTGCTTTGAAGATGTGCTGTTGGCTGGAAAATCTAACTGCGTATACGAAACATCACAATATGATTCTGAGTATTCGTTTCAAAACAAATTTCGACTGCAAGGAGCCATATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCCCGGTCCAATGAAATATGGCTTGTATTCAGTTATGAAGGAGTGTCATTGTCAAAACTTTTATATACTGTAGAAGATGCAAACAATACTGCCGAGAACGAAAGACTTGAGCAAGTGAAACAGGTTCGGATACTACGTCCATCAAAGTGGTGGCGTTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAACTGGTATGTCTTCAATGTAGGTTTGTAAGGGGTATTTATGTTATCCATATGGTTCGCTAATATATAACCATGAAAACTACGACAACACAACAACTCCCCCCCCCCCCCCCCCCCCCAATAAGGATTCGACAAAATTAAGTTTCTTGTTTTTACCATCACTGTTGTTATTTTTATTTGTATTATTGAACATGGTGTTAAACAAAAGTGAGATCAGTGTACCCACCCAATGAATGTGGAAAAGTTAATTTCTTTCTCAAAGGGAGGATACATGGATACAAAAAAGTAAAAGGACACTGTTACTATAAACCTTTTATGAGACCTCGTGTAATAGCTTTGGCTTCTAAGAGATTTGGTCTTTGACATGGTTTCAGAGCCTCCGTCCAAATAATCATAAATTTAATCCTCGCTGCCCCCATTCTTCTTAATTGAGGTAATTTAAGTATAATTAAGATGGCTTGTTAAAAAAAAAAAGTATAAGTAAGATGGGCCTTAGTGTTCCAAGCATCAGGCCCAAAGGATCTTTGTTAAGCAGCTTTTTAGGTATAAAACCTTTTATAAGCCTTTGCTAGCTACTTCTTTTAGGAGAGTTGATCCTTGACAAGAATACAATTGCAATATTAGAGCAAGAACAATATCGATCATTTCTGCATATTACATCAAGTGTTTACATCTTAACTGCTTTATGTGCAGCTAAGGCATGCACCTTTTCTGTCTGTTTTTTATATATCATAAACCTCTCTGTCTTGACTTTTCATGTGTATATTCCGTTTTTTTTTTCTTCTTACTTTTAAAAATTGTACTCATAATGTGATCCAAACCGATTCAAACAAGACTGCAAAACGATTCCAAAAACAAACCTAAAACCGAACAAAACTGATTTTACCAATTTTTCTTGAATGCTTTTTGGAACTCTTTCCGATCAAATATCAATTTATTTTTACTAATATTCTCTTTTATTTGCTCAGTTATTGGCACTCAAGTCTTGTCACGACCGCAATATCACACACAGGGATATTAAACCTGGTAAGACATGGGGGTAGTTTGTGGTGCCTAAGGGATGTATGCATGTAGATTTCTAGATAAACACTATTGTTTCATAAAGGATATCAATCATTTGGTACTGCTAAATTTGAAGTCACTAATGTTGAAGCACTTGATGTAAATGCTAAGTGGATTGTATTTGTTCAGATGTTAATTTATTTTATGGAAACTGACATGTTGCTATATTTTATAATAGACCCTCTTAATCAACCTGTCTTCATTTTGGGTTTCTGGATTTGCTACAACTAATTAAGCTGAAATCAATTCTGGTGATTCAATAGAATTTTTTTTCTCAAATATGTGGGATCTTTGTCTCACTTTTGTATTTAATGTCTAATTGGTTAAAATACTATTACGATGGCCCTTTTTCTGCGGTCCATAATAAGACTGCAATCTGTGTCCCTCAGATGTATGTATCTGTGAATTTTCTTTTTATTATAATGTATTGTTCAATTGAAAGAACTTGTTTCCTTGTAAAATGTAACTGACTTGAGGTATGTTATTTTTGAAGAGAATATGGTGATATGCTTTGAAGATCCAGAGTCAGGGAGATGCTTGAAAGATGCTCCAACAAAAGTGAATAATTTTTCCACCAAAATGTATGGTGAAGTATTTTAGTATCCTTCTTTTATTCTAACCTTTTTTTTAGAATAAAAAATTGATGGGAAACAATTTAATCTTTTATGCTATATATTTGATGTATAGTTAACTTGCTTCTATTTATAATATGATTTGATCTATTGTGGTTAATCCATATTTTGTGTGCATACTGTGCATTTAGTGTTAACATTATCCTACATAATGAGCAGAAGTAATTTCTTGAACTCTTTGCCCAATGTGTTTCATAGTTTTGGTGTTCGTAAAAGTCTTCCTGCTAATGGATTTCCTCTTTTTAATGTTTGATAATCTAAAATGTTTTTCCTTCTCTTCCCCCACCCCCAAATTTTGAGTTAAGTTGGAGAATGACTGATGGCGGTATATAGTACTTGAACATATATTTCAACTTTCAAGTAAATTACTGCTCTAATCTGAGATATTCAAGAAACCATTTGAATATATATCTTTAAATCCACCAATTTATCTTGATGATCCTCAAAGAATGCCTGTGAACTGCATACCCTTCAAAGGATTGATCTTTTAGCATCTCTACCAGTCAAAGTTGGCCAACTAAGTTGGGCAGTAGGACTTTCCATGATGTTAAAATGTCAAGTCTTGATTTGTTGTATGCATCAATAAGGGTACCCATCTAGGGACCTCCCTGTCTATGGAAGGGAATCTCTTTCCACTTCTTTCTTACTATTCTTCTTATAATTTAAATTATCTGCAATTTGGATGCACATTTAGTGTTCCTTGGTTTCAGCACATCTATTCATAGTGGGTCTACTGTTAGTTATGTATCAGTGGATCCGGGCATCCGGCCGTCAGTTATGGTGACATTTTGCACGGATGTGCGTTAAGTAGAATTGCAATGCTTGCATGGTTCTTAAAGTATTGAAGTTTTCTTTGATCCTTTCTTACAGTACATTTGGACTTGAGACTTATCCATGTTATCTGGTGCATGAAAATTCTAAATTAATTTCTGATTTCCTGATACAATCTTTAATCCGGGCTTAGTTCAATTGATATCCATGTTTGACTATCTCCTGCTTACATTAAGAAAAAAATTTCTTTATCTGGTTTTTTTGTATATAAATTGATAATCATTGGTTTGAGTCTTCGACAATGATAGCAGTACAACTGGGTTATTGCTTACCTTTAAAATTGGATTTGGCTATCAAATTATTTGCATGTGTGTGTATGCGCATGCATGCATATTTTACTGTTTTGCTTGCTGAATTTGATGTCCTTTTTCTGTTTCTTGTAGGCGTATTATTGACTTTGGAAGTGGAATTGACGAGTTCACAATAAAGCATTTATATGCTTCTACTGGGCCTTCTAGGTATCTTATTGCTCAGTCTAAATACTAGTATTATTTACTTATTTAATTTATTTATATGTGATTTTTGTGATAAACGTGTGCTTTATGTTATTTCAGAGCTGAACAAACTTACGAGTACACACCTCCTGAAGCTTTGCTAAATGCTACATGGTATCAAGGGCCATCAAGCTCAACTTTGAAGTATGTCATATTTTGCATGACTTACGCATCTTGTATTTCTTTTTCTAAAAGATTTTGCATGATTGTTTGGTGGATTTAGATTTTAGACGGTATTACTTGAAAATTTTGAAGCAATCTTTCTGCTATTACAGGTATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGATGGTCTTAGGGACACCAAATATTTTCCAGATAAATGCTTTAACACGTGCTCTTTTGGATCGGCATCTTGAGGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAGTAAGTGTGCCTTTTAGAAGGCTGTAATCATAACCTTCTTTAATACTGTAAATTTTTGGCCCTCTGACAATAATTTTTTCTCTATAAACCAGAAAGACAGCTAACATTAATTCATGTGGTGCACCAATTTCATAGTGAATGCACTGAGTTATTTATTTATTTTGTTTCCCGAGATGCCTTCTAAGCCAAGATTGCTTGCTGATGGTTTTTAGTAGTAGTTGTAAACTCAACTGTGAATTTGTAGCACAACGCTAGTTCATTCTGAAGACTTGCATATTTGAACCTCTGGAATCTATATTATCGCTATTTATTTTATTAATGTGGCCGACAGACTTAGATCGTTCATGGAATTGTGCATCTTAATCCCTGGGGTTTCTGGCAGCTACTCAAAAAAGTATCACAAAGTGAATCAAGTAAGTTTACCTTCTTAGCCGGGACAGTCTCTGGTTCATGACCTTGTCAAAAGCTAATTATTTTGTTTAAACTTTTTCTCTTCTTAATGTATAACGTTGGTTCACAACTTTTACTTTTATGATGGAAAATGTTTTGTTGTAATAATGTTATAAATAAATTGGTTTGGTTCTGTTGATTCTTCAAAACTGAGCTTGTTTTCAACACAGATAAGTAGTGACTAGAGACAAAGATAATCTCCAAAGTTCAGGTGCTTATTACTTAAGAACTCTCCCAATTCTAATATCCCAAAGATAATAACAGTAGGTAAATATAATTTAGAAAAGGGTTTATCATCGGAGTAAGAAGCCTCTCAGATCTGGAATTTTATAATTCCCCTAAAAGATGGCTGGATGCATATCCCTAGGATTATTTAATGTTTATCAACAACCGTTGTGGCCAGCCCAACATGTCAAAGCTCAAATTTCTTCAAAAAAATAAGATGTCAAAGCTCAAATAACCTTGAGGTTTAAAATGCGTTGAAAAATACAAGACTATTTATATCTTCCTGTTTCTCAATCATTTTGTATGGTTGGCCCTACCTAAACTGCATTACTGATGGAATGATATTGTCTCCAATATTTACCGAGAATTCAATTTATTCAGATATCTATTTAGAAAAATATTTGTTCAACCTAGTCAGAAACATGGACCAAAATCTTGGATTTCATTCCCTTGGGGAAGATTGACTTGAAGCTTTGATTGTCTGTTTCTAGATTAGTCCATTCCAATGGTTCATAGGCCGTGGGGTCAGTAACCTTGCGTTGAGACAAAAGTAACAAATTGTTACTTCTCACAAAAGCCAACATTGGAACGCGAAACAAACCATCTCTATGGTTCACAAACATGCTTTAGTTGTTGGAGACACACTGCCTTCCAACTTCCTTATTTGAATATATTGCCTAATGAAGTTTTCTTTTCTGTCATTATAGGTTGGAGTTTCGCCTGCATCCTGGAAATGCTCTGAAGAATTCTTTTCTAGACAAATTAAGGCTAGAGATCCTCTTAAAATAGGGTTGGCTGGCTAACTTTCTATGCTTTTATCGTGCTATGAAATATATTTAGTCTTCTCCTATGAAGCAGTTGTTCTCTTCATAACATTTTTGTTAGTCTTGCAGTTTTTCAGACATCTGGGCTTTACGGTTAGTGCGCCATCTGCTTATGTGGGACCCGGTAAGTTTCCTGATAACTTTTGATTGTAATTTTGTGATCCTAAAGTTCCATATTTCAAAAAAGTTTGTTCAAAGAAACTATCTAAACTATTTGCCATCCTGGTCTTAGCATTAAAATTTGATTGCCCTGTGTGCAGCTGTACTAAACACTCTAATATCTTAGTAATAGGAGCTTAAGTTTATTTCGCTACAAAGACTGTTCATTTATTTTAGTTTTTACTGTGTGTGAAGTTCAACAAAACCTCATTTTATCTTCGTTCTATTCACCAAAAGAAAAGAAAAATACTTTATATTCGTTCTTGTCAATCTTTTGGTCAACAACTGCTTTAGTTGGGTAGTGTTGTATCTGATGAAGGTCTCTTACTCTCTTTATATTTTGCAGGAGGATCGGCCAAGTGTTGACGAGGCATTGCGGCATCCCTATTTCCAACCTCCACCAAGAAGATAA

Protein sequence

>MS.gene50548.t1

MIRKHFFIALGFLLLSATIPFTHAESSTCFPNMIRKHFFIALGFLLLSATIPFTHAESSTCLTVYKHGGAPAVFQSPKCPRWNLFDHNSRPQSTTRCHSAMLQGRRKSQEDRTLCVLDLRIPFPGAMGIKEVVVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDATYSVISKASTGTLLHGKDHDHVNVLHRRKEMLGWQLNELHSERLQNTFSANFDDSFHLEILKEALLRAIHDIDEKFSEEASRNNLHSGSTATVVLVADDKILVANIGDSKAFLCSENFQSPKEAKASLLKLYRQTERDGSVSVWDREKYRLASSQGLTNFAVKELTRDHHPDREDERTRVEAAGGQVLNWGGLPRVNGQLAITRAIGDVFFKSYGVVSAPEVTDWQPLTANDSYLVAASDGVFEKLSVQDVCDLLWEVHRLCDMRSDCTSSSSYSLADFIINTALKKGSMDNMAAVVVPLESFKSSANSLRRSYTENEDAGFPLFGLQESAYRSSANGITSDRLHLEHPNLPDTKFKRIMVEVKHGDFGCFYLSENLGDLVDSKWLAKKDDWEDYLYELPQPIPDALHQQAVVDGPVILYNDQNFCFHLSSTINEANDQCINPEGFASFIGLLESIPLHDTGSDNRSSDYSMPDSRYVLKRSFGRGSYGEVWLAFHWNCNQGNITAKMSKGDNNRNSSSSNPECQDGPSNYTLYILKRIMVEKGSAVYLSGLREKHFGEIFLNASMCFEDVLLAGKSNCVYETSQYDSEYSFQNKFRLQGAIYEEGLNHIARYVESFESRSNEIWLVFSYEGVSLSKLLYTVEDANNTAENERLEQVKQVRILRPSKWWRWLKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDPESGRCLKDAPTKVNNFSTKMRIIDFGSGIDEFTIKHLYASTGPSRAEQTYEYTPPEALLNATWYQGPSSSTLKYDMWSVGVVMLEMVLGTPNIFQINALTRALLDRHLEGWNEGVKELAYKLRSFMELCILIPGVSGSYSKKYHKVNQVGVSPASWKCSEEFFSRQIKARDPLKIGFSDIWALRLVRHLLMWDPEDRPSVDEALRHPYFQPPPRR