Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50905.t1 | RHN74647.1 | 48.1 | 187 | 6 | 1 | 1 | 96 | 312 | 498 | 8.80E-29 | 137.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50905.t1 | F4IBQ9 | 30.1 | 186 | 39 | 1 | 2 | 96 | 428 | 613 | 3.2e-11 | 70.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50905.t1 | A0A072V9B7 | 48.1 | 187 | 6 | 1 | 1 | 96 | 268 | 454 | 6.4e-29 | 137.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05265 | MS.gene50905 | 0.823652 | 1.23E-53 | -1.69E-46 |
| MS.gene059458 | MS.gene50905 | 0.817974 | 2.50E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50905.t1 | MTR_2g069950 | 93.939 | 66 | 4 | 0 | 1 | 66 | 268 | 333 | 4.23e-36 | 134 |
| MS.gene50905.t1 | MTR_2g069950 | 59.322 | 59 | 21 | 1 | 41 | 96 | 396 | 454 | 5.80e-14 | 70.1 |
| MS.gene50905.t1 | MTR_8g098375 | 53.086 | 81 | 23 | 3 | 87 | 152 | 201 | 281 | 9.27e-16 | 73.9 |
| MS.gene50905.t1 | MTR_5g010150 | 51.852 | 81 | 24 | 3 | 87 | 152 | 201 | 281 | 2.31e-15 | 72.8 |
| MS.gene50905.t1 | MTR_4g415300 | 50.617 | 81 | 25 | 3 | 87 | 152 | 204 | 284 | 6.17e-15 | 71.6 |
| MS.gene50905.t1 | MTR_3g070210 | 49.383 | 81 | 26 | 2 | 87 | 152 | 204 | 284 | 2.08e-14 | 70.5 |
| MS.gene50905.t1 | MTR_5g082070 | 49.383 | 81 | 26 | 2 | 87 | 152 | 204 | 284 | 5.22e-14 | 69.3 |
| MS.gene50905.t1 | MTR_7g101190 | 37.903 | 124 | 51 | 5 | 51 | 151 | 152 | 272 | 3.52e-13 | 67.0 |
| MS.gene50905.t1 | MTR_1g095070 | 32.540 | 126 | 51 | 4 | 60 | 151 | 81 | 206 | 4.12e-13 | 65.9 |
| MS.gene50905.t1 | MTR_4g059390 | 31.008 | 129 | 49 | 4 | 60 | 151 | 147 | 272 | 2.01e-12 | 64.7 |
| MS.gene50905.t1 | MTR_2g094270 | 38.554 | 83 | 30 | 2 | 87 | 151 | 195 | 274 | 2.34e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50905.t1 | AT4G23400 | 38.583 | 127 | 44 | 4 | 60 | 152 | 155 | 281 | 5.00e-16 | 74.7 |
| MS.gene50905.t1 | AT1G72250 | 53.846 | 65 | 30 | 0 | 2 | 66 | 429 | 493 | 1.30e-15 | 75.1 |
| MS.gene50905.t1 | AT1G72250 | 53.846 | 65 | 30 | 0 | 2 | 66 | 440 | 504 | 1.30e-15 | 75.1 |
| MS.gene50905.t1 | AT1G72250 | 53.846 | 65 | 30 | 0 | 2 | 66 | 441 | 505 | 1.30e-15 | 75.1 |
| MS.gene50905.t1 | AT4G00430 | 51.852 | 81 | 24 | 3 | 87 | 152 | 201 | 281 | 2.63e-15 | 72.8 |
| MS.gene50905.t1 | AT1G01620 | 50.617 | 81 | 25 | 3 | 87 | 152 | 128 | 208 | 2.87e-15 | 71.6 |
| MS.gene50905.t1 | AT1G01620 | 50.617 | 81 | 25 | 3 | 87 | 152 | 200 | 280 | 5.04e-15 | 72.0 |
| MS.gene50905.t1 | AT3G61430 | 48.148 | 81 | 27 | 3 | 87 | 152 | 200 | 280 | 8.50e-14 | 68.6 |
| MS.gene50905.t1 | AT3G61430 | 48.148 | 81 | 27 | 3 | 87 | 152 | 200 | 280 | 8.50e-14 | 68.6 |
| MS.gene50905.t1 | AT2G45960 | 49.383 | 81 | 26 | 3 | 87 | 152 | 200 | 280 | 8.58e-14 | 68.6 |
| MS.gene50905.t1 | AT2G37170 | 37.903 | 124 | 49 | 4 | 52 | 151 | 194 | 313 | 1.48e-13 | 68.2 |
| MS.gene50905.t1 | AT2G37170 | 37.903 | 124 | 49 | 4 | 52 | 151 | 151 | 270 | 1.58e-13 | 67.8 |
| MS.gene50905.t1 | AT3G53420 | 36.800 | 125 | 51 | 4 | 51 | 151 | 152 | 272 | 4.49e-13 | 66.6 |
| MS.gene50905.t1 | AT3G53420 | 36.800 | 125 | 51 | 4 | 51 | 151 | 152 | 272 | 4.49e-13 | 66.6 |
| MS.gene50905.t1 | AT2G39010 | 33.333 | 129 | 46 | 4 | 60 | 151 | 146 | 271 | 5.95e-13 | 66.2 |
| MS.gene50905.t1 | AT2G37180 | 37.097 | 124 | 50 | 4 | 52 | 151 | 151 | 270 | 1.24e-12 | 65.5 |
| MS.gene50905.t1 | AT1G72250 | 48.387 | 62 | 32 | 0 | 5 | 66 | 423 | 484 | 7.56e-12 | 63.9 |
| MS.gene50905.t1 | AT3G54820 | 36.885 | 122 | 55 | 5 | 51 | 151 | 151 | 271 | 9.16e-12 | 62.8 |
| MS.gene50905.t1 | AT5G60660 | 37.097 | 124 | 52 | 5 | 51 | 151 | 152 | 272 | 1.27e-11 | 62.4 |
Find 37 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGCACCTTCAATATATT+TGG | 0.109558 | 3.3:+14372945 | None:intergenic |
| TATTGGATAGATTATGAAAA+TGG | 0.171541 | 3.3:-14373208 | MS.gene50905:intron |
| GATCTAGCTCACAGGTTTAA+AGG | 0.197029 | 3.3:-14371934 | MS.gene50905:CDS |
| TTCTGGGTTGGACCATTTAT+TGG | 0.216605 | 3.3:-14372114 | MS.gene50905:CDS |
| GCAAGAGCAGCTCCAATAAA+TGG | 0.282926 | 3.3:+14372102 | None:intergenic |
| TGAAGCAGATATAAGTGAAT+TGG | 0.306119 | 3.3:-14373142 | MS.gene50905:CDS |
| AGGCTCGAGGAGTAAATTTC+AGG | 0.331803 | 3.3:-14372452 | MS.gene50905:CDS |
| ATCTAGCTCACAGGTTTAAA+GGG | 0.353925 | 3.3:-14371933 | MS.gene50905:CDS |
| CTTTACCAGGGACTTTGCTT+GGG | 0.380297 | 3.3:-14372255 | MS.gene50905:CDS |
| GAAGCAGATATAAGTGAATT+GGG | 0.404189 | 3.3:-14373141 | MS.gene50905:CDS |
| TCTTTACCAGGGACTTTGCT+TGG | 0.415464 | 3.3:-14372256 | MS.gene50905:CDS |
| CAAGAACACATCAAAATCAA+TGG | 0.436859 | 3.3:+14372300 | None:intergenic |
| GGAACACATGAAGCTGTTAG+AGG | 0.445329 | 3.3:-14373187 | MS.gene50905:CDS |
| TTCAGTGCCTTCCATTGTGA+AGG | 0.449536 | 3.3:+14372476 | None:intergenic |
| AGATGGCTCGGATGACAATC+TGG | 0.450464 | 3.3:+14372067 | None:intergenic |
| TGATGTGTTCTTGGTCCACT+TGG | 0.459222 | 3.3:-14372290 | MS.gene50905:CDS |
| GCATATGGACAGACTGGGAC+TGG | 0.484273 | 3.3:-14372504 | MS.gene50905:intron |
| GAGCTGCCATCATCTTTACC+AGG | 0.490616 | 3.3:-14372268 | MS.gene50905:CDS |
| CTAAAGTCCAAATATATTGA+AGG | 0.490676 | 3.3:-14372952 | MS.gene50905:CDS |
| AAGAACACATCAAAATCAAT+GGG | 0.494981 | 3.3:+14372301 | None:intergenic |
| TTGCAGTGGATATTCTGGGT+TGG | 0.527082 | 3.3:-14372126 | MS.gene50905:intron |
| CATTGAATGAAACAACCTCT+TGG | 0.529807 | 3.3:-14371966 | MS.gene50905:CDS |
| AAAGTCCCTGGTAAAGATGA+TGG | 0.552855 | 3.3:+14372262 | None:intergenic |
| AGACTTGATGAGGAGATTGA+AGG | 0.561520 | 3.3:-14373314 | None:intergenic |
| ACATCAAAATCAATGGGAAG+AGG | 0.565182 | 3.3:+14372307 | None:intergenic |
| CAAATATATTGAAGGTGCCA+AGG | 0.571305 | 3.3:-14372944 | MS.gene50905:CDS |
| CAAACACAACAGCAGCAAGA+TGG | 0.581074 | 3.3:+14372050 | None:intergenic |
| GTCATCCCAAGCAAAGTCCC+TGG | 0.588043 | 3.3:+14372250 | None:intergenic |
| ACAACAGCAGCAAGATGGCT+CGG | 0.597911 | 3.3:+14372055 | None:intergenic |
| CACAATGGAAGGCACTGAAG+AGG | 0.611605 | 3.3:-14372472 | MS.gene50905:CDS |
| ATGAGCAAGATCTAGCTCAC+AGG | 0.618206 | 3.3:-14371942 | MS.gene50905:CDS |
| AAGGTGATAGAAAACGTACA+TGG | 0.633005 | 3.3:+14372228 | None:intergenic |
| AGCTGCCATCATCTTTACCA+GGG | 0.640815 | 3.3:-14372267 | MS.gene50905:CDS |
| TAGATCTTGCTCATACCAAG+AGG | 0.668311 | 3.3:+14371951 | None:intergenic |
| AAGATGATGGCAGCTCCAAG+TGG | 0.676157 | 3.3:+14372275 | None:intergenic |
| GAAGGCACTGAAGAGGCTCG+AGG | 0.685190 | 3.3:-14372465 | MS.gene50905:CDS |
| TGGCTCGGATGACAATCTGG+TGG | 0.725105 | 3.3:+14372070 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAATAAGGTAT+TGG | - | chr3.3:14372352-14372371 | MS.gene50905:intron | 10.0% |
| !!! | ATGATATGAAATTTTTTAAA+AGG | - | chr3.3:14371968-14371987 | MS.gene50905:CDS | 10.0% |
| !!! | TAAATTTGTTCATAAAAATA+AGG | + | chr3.3:14373025-14373044 | None:intergenic | 10.0% |
| !! | TTTAAATTTGATGTTATCTT+TGG | - | chr3.3:14372521-14372540 | MS.gene50905:intron | 15.0% |
| !!! | TCAAATTTAAAAGTACTTTT+TGG | + | chr3.3:14372512-14372531 | None:intergenic | 15.0% |
| !! | ATGTTTGATACAGTATTATA+TGG | - | chr3.3:14372814-14372833 | MS.gene50905:intron | 20.0% |
| !! | TATTGGATAGATTATGAAAA+TGG | - | chr3.3:14372023-14372042 | MS.gene50905:CDS | 20.0% |
| !!! | AATGTGTTTGTCAATTTTAT+TGG | - | chr3.3:14372006-14372025 | MS.gene50905:CDS | 20.0% |
| !!! | TCAAAAAGAGCTTTATAATA+AGG | - | chr3.3:14372311-14372330 | MS.gene50905:CDS | 20.0% |
| ! | AAGAACACATCAAAATCAAT+GGG | + | chr3.3:14372933-14372952 | None:intergenic | 25.0% |
| ! | CTAAAGTCCAAATATATTGA+AGG | - | chr3.3:14372279-14372298 | MS.gene50905:CDS | 25.0% |
| !! | AATGTATGCATTTTTGCATA+TGG | - | chr3.3:14372712-14372731 | MS.gene50905:intron | 25.0% |
| !! | AGAGCTTTATAATAAGGTAT+TGG | - | chr3.3:14372317-14372336 | MS.gene50905:CDS | 25.0% |
| !! | ATTCTATCCATCTAAAACTA+AGG | + | chr3.3:14372695-14372714 | None:intergenic | 25.0% |
| !!! | AATGTGGTTATTCTTTTTTG+GGG | - | chr3.3:14372884-14372903 | MS.gene50905:intron | 25.0% |
| !!! | CAATGTGGTTATTCTTTTTT+GGG | - | chr3.3:14372883-14372902 | MS.gene50905:intron | 25.0% |
| !!! | TCAATGTGGTTATTCTTTTT+TGG | - | chr3.3:14372882-14372901 | MS.gene50905:intron | 25.0% |
| !!! | TTATTGATGATATTTTGCAG+TGG | - | chr3.3:14373091-14373110 | MS.gene50905:intron | 25.0% |
| AATACTGAAGAGATGAAAGA+AGG | - | chr3.3:14372419-14372438 | MS.gene50905:intron | 30.0% | |
| ACTTAAGCATTAATGCCATA+GGG | - | chr3.3:14372563-14372582 | MS.gene50905:intron | 30.0% | |
| CAAGAACACATCAAAATCAA+TGG | + | chr3.3:14372934-14372953 | None:intergenic | 30.0% | |
| CTTTATAGCTGATATCTTTG+AGG | - | chr3.3:14372651-14372670 | MS.gene50905:intron | 30.0% | |
| GAAGCAGATATAAGTGAATT+GGG | - | chr3.3:14372090-14372109 | MS.gene50905:CDS | 30.0% | |
| GACTAACTCTAATTTCAATG+TGG | - | chr3.3:14372868-14372887 | MS.gene50905:intron | 30.0% | |
| TACTTAAGCATTAATGCCAT+AGG | - | chr3.3:14372562-14372581 | MS.gene50905:intron | 30.0% | |
| TGAAGCAGATATAAGTGAAT+TGG | - | chr3.3:14372089-14372108 | MS.gene50905:CDS | 30.0% | |
| ! | ATAAAGCTCTTTTTGAACCT+TGG | + | chr3.3:14372307-14372326 | None:intergenic | 30.0% |
| ! | ATATTTTGCAGTGGATATTC+TGG | - | chr3.3:14373100-14373119 | MS.gene50905:intron | 30.0% |
| ! | TATTTTGCAGTGGATATTCT+GGG | - | chr3.3:14373101-14373120 | MS.gene50905:intron | 30.0% |
| ! | TCATTCACTCAACTTTTGTT+AGG | + | chr3.3:14371952-14371971 | None:intergenic | 30.0% |
| ! | TCTAAAACTAAGGTTGCAAA+TGG | + | chr3.3:14372685-14372704 | None:intergenic | 30.0% |
| !! | TTTTGGGGAATTATAGATCT+TGG | - | chr3.3:14372899-14372918 | MS.gene50905:intron | 30.0% |
| !!! | CATTGATTTTGATGTGTTCT+TGG | - | chr3.3:14372932-14372951 | MS.gene50905:CDS | 30.0% |
| !!! | TTTGCAACCTTAGTTTTAGA+TGG | - | chr3.3:14372685-14372704 | MS.gene50905:intron | 30.0% |
| AAGGTGATAGAAAACGTACA+TGG | + | chr3.3:14373006-14373025 | None:intergenic | 35.0% | |
| AAGTACCTTGTTCAACTTGA+GGG | + | chr3.3:14372547-14372566 | None:intergenic | 35.0% | |
| ACATCAAAATCAATGGGAAG+AGG | + | chr3.3:14372927-14372946 | None:intergenic | 35.0% | |
| CATTGAATGAAACAACCTCT+TGG | - | chr3.3:14373265-14373284 | MS.gene50905:intron | 35.0% | |
| CTTGGCACCTTCAATATATT+TGG | + | chr3.3:14372289-14372308 | None:intergenic | 35.0% | |
| TAAGTACCTTGTTCAACTTG+AGG | + | chr3.3:14372548-14372567 | None:intergenic | 35.0% | |
| TCGAGCAGAATCAAAATCTA+AGG | + | chr3.3:14372456-14372475 | None:intergenic | 35.0% | |
| ! | ATCAAAATCTAAGGCCATTG+TGG | + | chr3.3:14372447-14372466 | None:intergenic | 35.0% |
| ! | ATCTAGCTCACAGGTTTAAA+GGG | - | chr3.3:14373298-14373317 | MS.gene50905:intron | 35.0% |
| ! | ATTTTTGCATATGGACAGAC+TGG | - | chr3.3:14372721-14372740 | MS.gene50905:intron | 35.0% |
| ! | TTCATCTCTTCAGTATTGAG+AGG | + | chr3.3:14372416-14372435 | None:intergenic | 35.0% |
| ! | TTTTTGCATATGGACAGACT+GGG | - | chr3.3:14372722-14372741 | MS.gene50905:intron | 35.0% |
| !! | AATAAGGTATTGGAGTTGAG+AGG | - | chr3.3:14372362-14372381 | MS.gene50905:intron | 35.0% |
| !! | CAAATATATTGAAGGTGCCA+AGG | - | chr3.3:14372287-14372306 | MS.gene50905:CDS | 35.0% |
| !!! | CCATAGGGTCTTTTTAACTT+CGG | - | chr3.3:14372578-14372597 | MS.gene50905:intron | 35.0% |
| AAAGTCCCTGGTAAAGATGA+TGG | + | chr3.3:14372972-14372991 | None:intergenic | 40.0% | |
| CCGAAGTTAAAAAGACCCTA+TGG | + | chr3.3:14372581-14372600 | None:intergenic | 40.0% | |
| GACTGGAAAAACCTTCACAA+TGG | - | chr3.3:14372744-14372763 | MS.gene50905:intron | 40.0% | |
| GGAAAAACCTTCACAATGGA+AGG | - | chr3.3:14372748-14372767 | MS.gene50905:intron | 40.0% | |
| GGAGTTGAGAGGAAACATAA+GGG | - | chr3.3:14372373-14372392 | MS.gene50905:intron | 40.0% | |
| TACACTGTACACATGCGAAA+GGG | + | chr3.3:14372196-14372215 | None:intergenic | 40.0% | |
| TAGATCTTGCTCATACCAAG+AGG | + | chr3.3:14373283-14373302 | None:intergenic | 40.0% | |
| TGGAGTTGAGAGGAAACATA+AGG | - | chr3.3:14372372-14372391 | MS.gene50905:intron | 40.0% | |
| ! | GATCTAGCTCACAGGTTTAA+AGG | - | chr3.3:14373297-14373316 | MS.gene50905:intron | 40.0% |
| ! | TTCTGGGTTGGACCATTTAT+TGG | - | chr3.3:14373117-14373136 | MS.gene50905:intron | 40.0% |
| !!! | GATTTTGATTCTGCTCGAGA+TGG | - | chr3.3:14372458-14372477 | MS.gene50905:CDS | 40.0% |
| AGCTGCCATCATCTTTACCA+GGG | - | chr3.3:14372964-14372983 | MS.gene50905:CDS | 45.0% | |
| AGGCTCGAGGAGTAAATTTC+AGG | - | chr3.3:14372779-14372798 | MS.gene50905:intron | 45.0% | |
| CAAACACAACAGCAGCAAGA+TGG | + | chr3.3:14373184-14373203 | None:intergenic | 45.0% | |
| CTTTACCAGGGACTTTGCTT+GGG | - | chr3.3:14372976-14372995 | MS.gene50905:CDS | 45.0% | |
| GAGCTTACTGGACTGTCAAA+TGG | - | chr3.3:14372482-14372501 | MS.gene50905:CDS | 45.0% | |
| GATGAAAGAAGGAGCCACAA+TGG | - | chr3.3:14372430-14372449 | MS.gene50905:CDS | 45.0% | |
| GCAAGAGCAGCTCCAATAAA+TGG | + | chr3.3:14373132-14373151 | None:intergenic | 45.0% | |
| GGAACACATGAAGCTGTTAG+AGG | - | chr3.3:14372044-14372063 | MS.gene50905:CDS | 45.0% | |
| GTACACTGTACACATGCGAA+AGG | + | chr3.3:14372197-14372216 | None:intergenic | 45.0% | |
| TCTTTACCAGGGACTTTGCT+TGG | - | chr3.3:14372975-14372994 | MS.gene50905:CDS | 45.0% | |
| TGATGTGTTCTTGGTCCACT+TGG | - | chr3.3:14372941-14372960 | MS.gene50905:CDS | 45.0% | |
| TTCAGTGCCTTCCATTGTGA+AGG | + | chr3.3:14372758-14372777 | None:intergenic | 45.0% | |
| TTGCAGTGGATATTCTGGGT+TGG | - | chr3.3:14373105-14373124 | MS.gene50905:intron | 45.0% | |
| ! | ATGAGCAAGATCTAGCTCAC+AGG | - | chr3.3:14373289-14373308 | MS.gene50905:intron | 45.0% |
| ! | CAGTATTGAGAGGCCTACAA+CGG | + | chr3.3:14372406-14372425 | None:intergenic | 45.0% |
| ! | TAAGGGACTTTTGCCGTTGT+AGG | - | chr3.3:14372390-14372409 | MS.gene50905:intron | 45.0% |
| !! | TTTGGCCCTCAAGTTGAACA+AGG | - | chr3.3:14372539-14372558 | MS.gene50905:intron | 45.0% |
| !! | TTTCAAAAAAATAAAAAATA+AGG | - | chr3.3:14372346-14372365 | MS.gene50905:intron | 5.0% |
| ACAACAGCAGCAAGATGGCT+CGG | + | chr3.3:14373179-14373198 | None:intergenic | 50.0% | |
| GAGCTGCCATCATCTTTACC+AGG | - | chr3.3:14372963-14372982 | MS.gene50905:CDS | 50.0% | |
| ! | AAGATGATGGCAGCTCCAAG+TGG | + | chr3.3:14372959-14372978 | None:intergenic | 50.0% |
| ! | AGATGGCTCGGATGACAATC+TGG | + | chr3.3:14373167-14373186 | None:intergenic | 50.0% |
| !! | CACAATGGAAGGCACTGAAG+AGG | - | chr3.3:14372759-14372778 | MS.gene50905:intron | 50.0% |
| GCATATGGACAGACTGGGAC+TGG | - | chr3.3:14372727-14372746 | MS.gene50905:intron | 55.0% | |
| GCTCGAGATGGTGAGCTTAC+TGG | - | chr3.3:14372470-14372489 | MS.gene50905:CDS | 55.0% | |
| GTCATCCCAAGCAAAGTCCC+TGG | + | chr3.3:14372984-14373003 | None:intergenic | 55.0% | |
| ! | TGGCTCGGATGACAATCTGG+TGG | + | chr3.3:14373164-14373183 | None:intergenic | 55.0% |
| !! | GAAGGCACTGAAGAGGCTCG+AGG | - | chr3.3:14372766-14372785 | MS.gene50905:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 14371924 | 14373329 | 14371924 | ID=MS.gene50905 |
| chr3.3 | mRNA | 14371924 | 14373329 | 14371924 | ID=MS.gene50905.t1;Parent=MS.gene50905 |
| chr3.3 | exon | 14373315 | 14373329 | 14373315 | ID=MS.gene50905.t1.exon1;Parent=MS.gene50905.t1 |
| chr3.3 | CDS | 14373315 | 14373329 | 14373315 | ID=cds.MS.gene50905.t1;Parent=MS.gene50905.t1 |
| chr3.3 | exon | 14373121 | 14373220 | 14373121 | ID=MS.gene50905.t1.exon2;Parent=MS.gene50905.t1 |
| chr3.3 | CDS | 14373121 | 14373220 | 14373121 | ID=cds.MS.gene50905.t1;Parent=MS.gene50905.t1 |
| chr3.3 | exon | 14372921 | 14373003 | 14372921 | ID=MS.gene50905.t1.exon3;Parent=MS.gene50905.t1 |
| chr3.3 | CDS | 14372921 | 14373003 | 14372921 | ID=cds.MS.gene50905.t1;Parent=MS.gene50905.t1 |
| chr3.3 | exon | 14372428 | 14372514 | 14372428 | ID=MS.gene50905.t1.exon4;Parent=MS.gene50905.t1 |
| chr3.3 | CDS | 14372428 | 14372514 | 14372428 | ID=cds.MS.gene50905.t1;Parent=MS.gene50905.t1 |
| chr3.3 | exon | 14372243 | 14372338 | 14372243 | ID=MS.gene50905.t1.exon5;Parent=MS.gene50905.t1 |
| chr3.3 | CDS | 14372243 | 14372338 | 14372243 | ID=cds.MS.gene50905.t1;Parent=MS.gene50905.t1 |
| chr3.3 | exon | 14371924 | 14372142 | 14371924 | ID=MS.gene50905.t1.exon6;Parent=MS.gene50905.t1 |
| chr3.3 | CDS | 14371924 | 14372142 | 14371924 | ID=cds.MS.gene50905.t1;Parent=MS.gene50905.t1 |
| Gene Sequence |
| Protein sequence |
