Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51298.t1 | RHN52774.1 | 90.9 | 493 | 40 | 1 | 1 | 488 | 1 | 493 | 1.10E-258 | 902.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51298.t1 | Q9C9T2 | 51.2 | 406 | 168 | 8 | 71 | 473 | 72 | 450 | 7.6e-107 | 389.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51298.t1 | A0A396HLL0 | 90.9 | 493 | 40 | 1 | 1 | 488 | 1 | 493 | 8.0e-259 | 902.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05439 | MS.gene51298 | 0.812808 | 3.52E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51298.t1 | MTR_6g083730 | 90.467 | 493 | 34 | 2 | 1 | 488 | 1 | 485 | 0.0 | 913 |
| MS.gene51298.t1 | MTR_8g104510 | 63.202 | 481 | 161 | 10 | 1 | 473 | 1 | 473 | 0.0 | 596 |
| MS.gene51298.t1 | MTR_8g104490 | 62.020 | 495 | 169 | 13 | 1 | 486 | 1 | 485 | 0.0 | 573 |
| MS.gene51298.t1 | MTR_6g083320 | 89.632 | 299 | 26 | 1 | 1 | 294 | 1 | 299 | 0.0 | 543 |
| MS.gene51298.t1 | MTR_6g083320 | 84.091 | 132 | 13 | 1 | 357 | 488 | 296 | 419 | 8.28e-71 | 231 |
| MS.gene51298.t1 | MTR_8g104490 | 63.380 | 426 | 142 | 11 | 66 | 486 | 4 | 420 | 4.89e-180 | 511 |
| MS.gene51298.t1 | MTR_4g128600 | 46.959 | 411 | 201 | 8 | 4 | 409 | 14 | 412 | 9.61e-121 | 367 |
| MS.gene51298.t1 | MTR_4g090970 | 41.903 | 494 | 252 | 12 | 2 | 487 | 13 | 479 | 4.02e-116 | 355 |
| MS.gene51298.t1 | MTR_2g011810 | 46.310 | 393 | 199 | 7 | 1 | 387 | 12 | 398 | 4.93e-114 | 350 |
| MS.gene51298.t1 | MTR_2g450080 | 42.308 | 442 | 231 | 8 | 4 | 437 | 11 | 436 | 3.42e-110 | 338 |
| MS.gene51298.t1 | MTR_4g106810 | 47.368 | 304 | 152 | 7 | 14 | 315 | 9 | 306 | 3.87e-80 | 259 |
| MS.gene51298.t1 | MTR_6g083810 | 88.060 | 134 | 11 | 1 | 1 | 129 | 1 | 134 | 9.73e-76 | 234 |
| MS.gene51298.t1 | MTR_7g112000 | 35.143 | 350 | 208 | 9 | 47 | 390 | 44 | 380 | 8.48e-52 | 184 |
| MS.gene51298.t1 | MTR_7g111960 | 33.333 | 399 | 236 | 15 | 1 | 378 | 1 | 390 | 5.09e-47 | 171 |
| MS.gene51298.t1 | MTR_7g111980 | 31.646 | 395 | 237 | 11 | 1 | 376 | 1 | 381 | 3.75e-46 | 169 |
| MS.gene51298.t1 | MTR_7g111980 | 35.932 | 295 | 176 | 7 | 89 | 376 | 10 | 298 | 1.68e-44 | 163 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51298.t1 | AT1G73805 | 49.375 | 480 | 206 | 12 | 1 | 473 | 1 | 450 | 5.62e-147 | 428 |
| MS.gene51298.t1 | AT5G57580 | 41.267 | 521 | 247 | 14 | 9 | 482 | 17 | 525 | 2.53e-117 | 359 |
| MS.gene51298.t1 | AT4G25800 | 47.273 | 385 | 188 | 7 | 4 | 382 | 2 | 377 | 1.22e-112 | 345 |
| MS.gene51298.t1 | AT4G25800 | 47.273 | 385 | 188 | 7 | 4 | 382 | 2 | 377 | 1.22e-112 | 345 |
| MS.gene51298.t1 | AT2G18750 | 39.957 | 468 | 261 | 9 | 4 | 457 | 16 | 477 | 2.07e-108 | 335 |
| MS.gene51298.t1 | AT2G18750 | 39.957 | 468 | 261 | 9 | 4 | 457 | 16 | 477 | 2.07e-108 | 335 |
| MS.gene51298.t1 | AT2G18750 | 39.957 | 468 | 261 | 9 | 4 | 457 | 16 | 477 | 2.07e-108 | 335 |
| MS.gene51298.t1 | AT2G24300 | 43.669 | 387 | 208 | 7 | 4 | 384 | 3 | 385 | 4.39e-97 | 305 |
| MS.gene51298.t1 | AT2G24300 | 43.669 | 387 | 208 | 7 | 4 | 384 | 7 | 389 | 4.56e-97 | 305 |
| MS.gene51298.t1 | AT4G31000 | 41.928 | 415 | 217 | 10 | 11 | 417 | 13 | 411 | 1.97e-96 | 302 |
| MS.gene51298.t1 | AT5G62570 | 38.619 | 391 | 216 | 10 | 1 | 381 | 1 | 377 | 1.30e-84 | 270 |
| MS.gene51298.t1 | AT2G24300 | 44.478 | 335 | 177 | 6 | 55 | 384 | 8 | 338 | 2.25e-84 | 271 |
| MS.gene51298.t1 | AT5G62570 | 39.410 | 373 | 202 | 10 | 1 | 363 | 1 | 359 | 5.36e-84 | 264 |
| MS.gene51298.t1 | AT5G62570 | 39.503 | 362 | 198 | 8 | 29 | 381 | 13 | 362 | 1.64e-82 | 264 |
| MS.gene51298.t1 | AT4G31000 | 37.500 | 416 | 213 | 13 | 11 | 417 | 13 | 390 | 1.08e-72 | 239 |
| MS.gene51298.t1 | AT5G62570 | 41.528 | 301 | 157 | 8 | 1 | 295 | 1 | 288 | 6.98e-68 | 220 |
| MS.gene51298.t1 | AT5G26920 | 35.278 | 360 | 213 | 8 | 26 | 381 | 24 | 367 | 1.19e-67 | 223 |
| MS.gene51298.t1 | AT5G26920 | 35.278 | 360 | 213 | 8 | 26 | 381 | 24 | 367 | 7.70e-67 | 225 |
| MS.gene51298.t1 | AT5G26920 | 35.000 | 360 | 206 | 9 | 26 | 381 | 24 | 359 | 1.99e-63 | 216 |
Find 115 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTGGTTGCTACTGTTTC+TGG | 0.134866 | 6.3:+78120782 | None:intergenic |
| TCAACAAGACTTATGCTTAT+AGG | 0.197679 | 6.3:+78123686 | None:intergenic |
| ACTACAATCTCTAGCTTTAT+AGG | 0.214346 | 6.3:+78123620 | None:intergenic |
| GGATAAGGAGCAGGAAGTTT+AGG | 0.223342 | 6.3:-78123421 | MS.gene51298:CDS |
| GAAGACTTGTTGGAACAATT+TGG | 0.268874 | 6.3:+78123648 | None:intergenic |
| GGGAAGAGACCATTACTTTC+TGG | 0.273521 | 6.3:-78123515 | MS.gene51298:CDS |
| GCTTTAATTAATTTGCATAT+TGG | 0.279068 | 6.3:+78121720 | None:intergenic |
| AGTATCATACCTGTGAAAAT+TGG | 0.282063 | 6.3:+78124288 | None:intergenic |
| ACTGTTTCTGGATGATTGTT+TGG | 0.296756 | 6.3:+78120794 | None:intergenic |
| GCAGAGCTATATAGACAAAT+TGG | 0.313599 | 6.3:-78121511 | MS.gene51298:intron |
| TGCATTTGGTGTTGTGGTAT+AGG | 0.314012 | 6.3:+78120655 | None:intergenic |
| AATGCAAATGGATTTCCTTT+TGG | 0.323071 | 6.3:-78120638 | MS.gene51298:CDS |
| TATCATCAGAATCAATATTA+TGG | 0.324552 | 6.3:-78120761 | MS.gene51298:CDS |
| CTAGAGATTGTAGTGCTTGA+TGG | 0.330811 | 6.3:-78123611 | MS.gene51298:CDS |
| TATATTGTACCTTATTCATT+TGG | 0.342595 | 6.3:+78121655 | None:intergenic |
| GATAAGGAGCAGGAAGTTTA+GGG | 0.346752 | 6.3:-78123420 | MS.gene51298:CDS |
| TTGGAGAAGCATACACAAAA+TGG | 0.358634 | 6.3:-78121488 | MS.gene51298:CDS |
| GGTCTCATTCGTTTGTCGTT+TGG | 0.363334 | 6.3:+78125447 | None:intergenic |
| GTACTTGAGCCAAATGAATA+AGG | 0.364385 | 6.3:-78121664 | MS.gene51298:intron |
| AAAGGAAATCCATTTGCATT+TGG | 0.365748 | 6.3:+78120641 | None:intergenic |
| GAAGAGGTGGATAGAGCAAT+TGG | 0.372285 | 6.3:-78124417 | MS.gene51298:CDS |
| GACTGAGGCATTTGTTGTTA+AGG | 0.376185 | 6.3:-78123342 | MS.gene51298:CDS |
| ATATATACCTCTCTTAGCTT+TGG | 0.385685 | 6.3:+78122403 | None:intergenic |
| CTACAATCTCTAGCTTTATA+GGG | 0.387802 | 6.3:+78123621 | None:intergenic |
| GCTTTCCACCTTCCATCAAT+AGG | 0.389606 | 6.3:-78124389 | MS.gene51298:CDS |
| ATAGGGTAAGGAAGACTTGT+TGG | 0.390458 | 6.3:+78123638 | None:intergenic |
| CTGTCCCTAGGGACATTAAT+GGG | 0.391628 | 6.3:-78120571 | MS.gene51298:CDS |
| TCTGTCCCTAGGGACATTAA+TGG | 0.395267 | 6.3:-78120572 | MS.gene51298:CDS |
| GTTGTTTATCCCTTGGTGCT+TGG | 0.403469 | 6.3:+78124349 | None:intergenic |
| GAAGTTTAGGGTTGCAGTTA+TGG | 0.408854 | 6.3:-78123408 | MS.gene51298:CDS |
| TAATGAAGGTGACCTATTGA+TGG | 0.408912 | 6.3:+78124377 | None:intergenic |
| GTGTGGCGCCTAGAGAAGAT+AGG | 0.412903 | 6.3:-78122511 | MS.gene51298:CDS |
| AAGGTTCCAAAGCTCCTAAA+AGG | 0.417229 | 6.3:+78125213 | None:intergenic |
| TACATAGTGAAGGAAAGAAC+TGG | 0.419237 | 6.3:-78123536 | MS.gene51298:CDS |
| GTATCATACCTGTGAAAATT+GGG | 0.431802 | 6.3:+78124289 | None:intergenic |
| TACAACTCATATTCAGCAAA+AGG | 0.439022 | 6.3:-78124320 | MS.gene51298:CDS |
| CACATGATGAAAATGAGAAC+TGG | 0.445604 | 6.3:-78123580 | MS.gene51298:CDS |
| CATCTTTCCCTATCTTCTCT+AGG | 0.450984 | 6.3:+78122503 | None:intergenic |
| AGAGGTGGAATTGCACCAAT+TGG | 0.453092 | 6.3:-78123473 | MS.gene51298:CDS |
| GACAAGCAATAATGCACAAA+TGG | 0.453205 | 6.3:-78120705 | MS.gene51298:CDS |
| ACCACAACACCAAATGCAAA+TGG | 0.454821 | 6.3:-78120650 | MS.gene51298:CDS |
| CAGATAATTCTAGCTGGATA+AGG | 0.456631 | 6.3:-78123436 | MS.gene51298:CDS |
| ATCTCTAGCTTTATAGGGTA+AGG | 0.456668 | 6.3:+78123626 | None:intergenic |
| ACATGGGGAGCAAGATCTAT+AGG | 0.460309 | 6.3:-78121776 | MS.gene51298:CDS |
| TTTGCTGAATATGAGTTGTA+AGG | 0.462311 | 6.3:+78124323 | None:intergenic |
| GTGGGAGTAATCAAAGTGTT+AGG | 0.463827 | 6.3:-78123379 | MS.gene51298:CDS |
| TCCAAAGCTCCTAAAAGGTT+CGG | 0.465480 | 6.3:+78125218 | None:intergenic |
| TTAATTAAAGCTAATATCAA+TGG | 0.468078 | 6.3:-78121708 | MS.gene51298:CDS |
| TCCATTTGCATTTGGTGTTG+TGG | 0.474676 | 6.3:+78120649 | None:intergenic |
| AAGGTTGGTTGTTTATCCCT+TGG | 0.483093 | 6.3:+78124342 | None:intergenic |
| CAATTCCACCTCTCATAGTA+AGG | 0.486241 | 6.3:+78123483 | None:intergenic |
| TTGGCTCAAGTACTCTCTGC+TGG | 0.488877 | 6.3:+78121674 | None:intergenic |
| CTGAATATGAGTTGTAAGGT+TGG | 0.491971 | 6.3:+78124327 | None:intergenic |
| CCACCACAAAATGATGGCTA+AGG | 0.503068 | 6.3:-78122473 | MS.gene51298:CDS |
| AATGAGTTGGAGGAAATTGA+TGG | 0.503298 | 6.3:-78121465 | MS.gene51298:CDS |
| CACAAAATGGAATGAGTTGG+AGG | 0.508685 | 6.3:-78121475 | MS.gene51298:CDS |
| CACACATCATCGCCAAGCAT+TGG | 0.517632 | 6.3:+78122529 | None:intergenic |
| AAACATCATCCACCAATGCT+TGG | 0.524035 | 6.3:-78122541 | MS.gene51298:CDS |
| AACATTGCTTTGTTAACCCA+AGG | 0.527734 | 6.3:-78121429 | MS.gene51298:intron |
| ATTCTAGCTGGATAAGGAGC+AGG | 0.530678 | 6.3:-78123430 | MS.gene51298:CDS |
| GGTGCTTGGATTCTTAATGA+AGG | 0.535525 | 6.3:+78124363 | None:intergenic |
| ACCTTCAAGTTCTGTCCCTA+GGG | 0.537786 | 6.3:-78120582 | MS.gene51298:CDS |
| ATGAGTTGGAGGAAATTGAT+GGG | 0.546736 | 6.3:-78121464 | MS.gene51298:CDS |
| CACCACAAAATGATGGCTAA+GGG | 0.548210 | 6.3:-78122472 | MS.gene51298:CDS |
| AGCTATATAGACAAATTGGT+TGG | 0.548813 | 6.3:-78121507 | MS.gene51298:CDS |
| GTGAACTCTATGTCTCCAAT+TGG | 0.550652 | 6.3:+78123458 | None:intergenic |
| TTCACAGGCTCACAATCAGA+TGG | 0.552859 | 6.3:-78120614 | MS.gene51298:CDS |
| AGTTCACAGATAATTCTAGC+TGG | 0.556731 | 6.3:-78123442 | MS.gene51298:CDS |
| ACATCATCGCCAAGCATTGG+TGG | 0.557359 | 6.3:+78122532 | None:intergenic |
| TCCCTAGGGACAGAACTTGA+AGG | 0.561736 | 6.3:+78120581 | None:intergenic |
| TTCAGAAGAATGATAAATTG+AGG | 0.561852 | 6.3:+78121744 | None:intergenic |
| TGTGAGCCTGTGAAGCCAAA+AGG | 0.567683 | 6.3:+78120623 | None:intergenic |
| TGGTTAGGTGAGTGAAGAGG+TGG | 0.568151 | 6.3:-78124430 | MS.gene51298:intron |
| ATACACAAAATGGAATGAGT+TGG | 0.570127 | 6.3:-78121478 | MS.gene51298:CDS |
| CACCTTCAAGTTCTGTCCCT+AGG | 0.570752 | 6.3:-78120583 | MS.gene51298:CDS |
| GTGAACCCATTAATGTCCCT+AGG | 0.571248 | 6.3:+78120566 | None:intergenic |
| CTAGAGAAGATAGGGAAAGA+TGG | 0.572158 | 6.3:-78122502 | MS.gene51298:CDS |
| GTTGCAGTTATGGTGAGTCG+TGG | 0.573264 | 6.3:-78123398 | MS.gene51298:CDS |
| TTCAATTCTCCAGAAAGTAA+TGG | 0.573973 | 6.3:+78123506 | None:intergenic |
| CAAAGTGTTAGGATTCAAGA+AGG | 0.583699 | 6.3:-78123368 | MS.gene51298:CDS |
| TCACAGGCTCACAATCAGAT+GGG | 0.585164 | 6.3:-78120613 | MS.gene51298:CDS |
| AGTGCGTACGAAGCTAAAGA+AGG | 0.588133 | 6.3:+78125426 | None:intergenic |
| ATATTGATTCTGATGATATG+TGG | 0.588853 | 6.3:+78120766 | None:intergenic |
| TGTGGCGCCTAGAGAAGATA+GGG | 0.589096 | 6.3:-78122510 | MS.gene51298:CDS |
| AGCTTTCCACCACAAAATGA+TGG | 0.589747 | 6.3:-78122479 | MS.gene51298:CDS |
| CAATGCTTGGCGATGATGTG+TGG | 0.590954 | 6.3:-78122528 | MS.gene51298:CDS |
| TGAGTTGGAGGAAATTGATG+GGG | 0.594581 | 6.3:-78121463 | MS.gene51298:CDS |
| ATTTGGTTAGGTGAGTGAAG+AGG | 0.598852 | 6.3:-78124433 | MS.gene51298:intron |
| ATTCAATAAATACATAGTGA+AGG | 0.602832 | 6.3:-78123546 | MS.gene51298:CDS |
| TGAACCCATTAATGTCCCTA+GGG | 0.602842 | 6.3:+78120567 | None:intergenic |
| TTGCAGTTATGGTGAGTCGT+GGG | 0.605352 | 6.3:-78123397 | MS.gene51298:CDS |
| GAATTGAACCTTACTATGAG+AGG | 0.607156 | 6.3:-78123491 | MS.gene51298:CDS |
| GAATGATAAATTGAGGTCCA+CGG | 0.610553 | 6.3:+78121751 | None:intergenic |
| TTGAACCTTACTATGAGAGG+TGG | 0.618381 | 6.3:-78123488 | MS.gene51298:CDS |
| TCATACCTGTGAAAATTGGG+AGG | 0.624528 | 6.3:+78124292 | None:intergenic |
| GCATGCAATGACTTGTGACA+TGG | 0.626229 | 6.3:-78121793 | MS.gene51298:CDS |
| AGTAGAATACTCGACGCTGA+AGG | 0.629771 | 6.3:-78123713 | MS.gene51298:CDS |
| ACATAGTGAAGGAAAGAACT+GGG | 0.634050 | 6.3:-78123535 | MS.gene51298:CDS |
| ATTAAGAATCCAAGCACCAA+GGG | 0.638386 | 6.3:-78124358 | MS.gene51298:CDS |
| CATACCTGTGAAAATTGGGA+GGG | 0.639003 | 6.3:+78124293 | None:intergenic |
| CATTAAGAATCCAAGCACCA+AGG | 0.647255 | 6.3:-78124359 | MS.gene51298:CDS |
| GGGACATTAATGGGTTCACA+AGG | 0.658302 | 6.3:-78120562 | MS.gene51298:CDS |
| ACCACAAAATGATGGCTAAG+GGG | 0.658660 | 6.3:-78122471 | MS.gene51298:CDS |
| AGCAAGATCTATAGGTACCG+TGG | 0.658732 | 6.3:-78121768 | MS.gene51298:CDS |
| GGTGACCTATTGATGGAAGG+TGG | 0.664907 | 6.3:+78124384 | None:intergenic |
| TGATACTCCAAAGCTAAGAG+AGG | 0.665341 | 6.3:-78122410 | MS.gene51298:intron |
| AATAATGCACAAATGGCTAG+TGG | 0.666919 | 6.3:-78120698 | MS.gene51298:CDS |
| CATGCAATGACTTGTGACAT+GGG | 0.667953 | 6.3:-78121792 | MS.gene51298:CDS |
| CACAGGCTCACAATCAGATG+GGG | 0.673448 | 6.3:-78120612 | MS.gene51298:CDS |
| GAAGGTGACCTATTGATGGA+AGG | 0.674542 | 6.3:+78124381 | None:intergenic |
| TGGGGATGTCTGATAGAATG+TGG | 0.679640 | 6.3:-78121830 | MS.gene51298:CDS |
| CACAAATGGCTAGTGGTGAG+TGG | 0.682521 | 6.3:-78120691 | MS.gene51298:CDS |
| TTTGTTGTTAAGGATCATCG+TGG | 0.682651 | 6.3:-78123332 | MS.gene51298:CDS |
| GATTCAAGAAGGCATGACTG+AGG | 0.696401 | 6.3:-78123357 | MS.gene51298:CDS |
| ATGCAATGACTTGTGACATG+GGG | 0.729736 | 6.3:-78121791 | MS.gene51298:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTTATTATATGATTTATT+TGG | - | chr6.3:78121601-78121620 | MS.gene51298:intron | 10.0% |
| !! | CATCTTATTAATATATTTAA+GGG | + | chr6.3:78122918-78122937 | None:intergenic | 10.0% |
| !!! | TTTTAAGATACTTAATAAAA+TGG | + | chr6.3:78125134-78125153 | None:intergenic | 10.0% |
| !!! | TTTTTATTAAAAATGGTAAA+AGG | + | chr6.3:78121238-78121257 | None:intergenic | 10.0% |
| !! | AACAAATTTAGCATAAAAAT+AGG | + | chr6.3:78123724-78123743 | None:intergenic | 15.0% |
| !! | AATCTAATATGTTTAACTAA+AGG | + | chr6.3:78124131-78124150 | None:intergenic | 15.0% |
| !! | AGGTATATATCTTTATAATT+AGG | - | chr6.3:78123661-78123680 | MS.gene51298:CDS | 15.0% |
| !! | ATATTGTATATATTGTTTGT+TGG | + | chr6.3:78121043-78121062 | None:intergenic | 15.0% |
| !! | ATTATATGATTTATTTGGTT+AGG | - | chr6.3:78121606-78121625 | MS.gene51298:intron | 15.0% |
| !! | CCATCTTATTAATATATTTA+AGG | + | chr6.3:78122919-78122938 | None:intergenic | 15.0% |
| !! | CCTTAAATATATTAATAAGA+TGG | - | chr6.3:78122916-78122935 | MS.gene51298:intron | 15.0% |
| !! | GGTATATATCTTTATAATTA+GGG | - | chr6.3:78123662-78123681 | MS.gene51298:CDS | 15.0% |
| !! | GTATATATCTTTATAATTAG+GGG | - | chr6.3:78123663-78123682 | MS.gene51298:CDS | 15.0% |
| !! | TATTGTATATATTGTTTGTT+GGG | + | chr6.3:78121042-78121061 | None:intergenic | 15.0% |
| !! | TGATATCATCATAAAATTTA+AGG | - | chr6.3:78121171-78121190 | MS.gene51298:intron | 15.0% |
| !! | TTAATTAAAGCTAATATCAA+TGG | - | chr6.3:78124343-78124362 | MS.gene51298:CDS | 15.0% |
| !! | TTATATTTAGTATTTACACA+AGG | - | chr6.3:78123269-78123288 | MS.gene51298:intron | 15.0% |
| !!! | AAATTTAAGGTTGTTTAATA+TGG | + | chr6.3:78121341-78121360 | None:intergenic | 15.0% |
| !!! | ATAAATTTGGTAATCAAATT+TGG | + | chr6.3:78122233-78122252 | None:intergenic | 15.0% |
| !!! | ATTTTTAATTGAAAATACCT+TGG | + | chr6.3:78124642-78124661 | None:intergenic | 15.0% |
| !!! | GTTAATATGAACTTAATTTT+AGG | - | chr6.3:78125212-78125231 | MS.gene51298:CDS | 15.0% |
| !!! | TAATATGATTCTCTAAAAAA+TGG | - | chr6.3:78121200-78121219 | MS.gene51298:intron | 15.0% |
| !!! | TTTTGTTTTTTTAACTCTAA+TGG | + | chr6.3:78122130-78122149 | None:intergenic | 15.0% |
| !!! | TTTTTAATTGAAAATACCTT+GGG | + | chr6.3:78124641-78124660 | None:intergenic | 15.0% |
| !!! | TTTTTAGATTAATATCAACT+AGG | + | chr6.3:78125084-78125103 | None:intergenic | 15.0% |
| !!! | TTTTTTTAACATGTATCATT+AGG | + | chr6.3:78123066-78123085 | None:intergenic | 15.0% |
| !! | AAATAAACAAACGAGTTAAT+AGG | + | chr6.3:78123943-78123962 | None:intergenic | 20.0% |
| !! | ATATATCATGCATAAGAATA+AGG | + | chr6.3:78120762-78120781 | None:intergenic | 20.0% |
| !! | ATGATATATTGAATTCTTCT+TGG | - | chr6.3:78120773-78120792 | MS.gene51298:CDS | 20.0% |
| !! | ATTCAATAAATACATAGTGA+AGG | - | chr6.3:78122505-78122524 | MS.gene51298:CDS | 20.0% |
| !! | CAAGACTCAAATAAAATTTA+AGG | + | chr6.3:78121354-78121373 | None:intergenic | 20.0% |
| !! | TAACTCGTTTGTTTATTTAA+GGG | - | chr6.3:78123945-78123964 | MS.gene51298:intron | 20.0% |
| !! | TAATTAAATTCCTTAACTAG+CGG | + | chr6.3:78123025-78123044 | None:intergenic | 20.0% |
| !! | TAGCATGATATATTATTGAT+TGG | - | chr6.3:78122821-78122840 | MS.gene51298:intron | 20.0% |
| !! | TATATTGTACCTTATTCATT+TGG | + | chr6.3:78124399-78124418 | None:intergenic | 20.0% |
| !! | TATCATCAGAATCAATATTA+TGG | - | chr6.3:78125290-78125309 | MS.gene51298:intron | 20.0% |
| !! | TTAACTCGTTTGTTTATTTA+AGG | - | chr6.3:78123944-78123963 | MS.gene51298:intron | 20.0% |
| !!! | AAAAGTCTTTTAGTTCTATT+AGG | - | chr6.3:78123785-78123804 | MS.gene51298:intron | 20.0% |
| !!! | AATGACGAAAAGTATAAATT+TGG | + | chr6.3:78122246-78122265 | None:intergenic | 20.0% |
| !!! | ATACATATTTGAAGTTAATG+TGG | - | chr6.3:78120960-78120979 | MS.gene51298:intron | 20.0% |
| !!! | ATAGGGTAAATGATTTTTAT+TGG | - | chr6.3:78123214-78123233 | MS.gene51298:intron | 20.0% |
| !!! | ATTTTTCTGAAATCAGATTT+TGG | - | chr6.3:78124195-78124214 | MS.gene51298:intron | 20.0% |
| !!! | CTTTTATTTTCAACTAACTT+TGG | - | chr6.3:78122871-78122890 | MS.gene51298:intron | 20.0% |
| !!! | GCTTTAATTAATTTGCATAT+TGG | + | chr6.3:78124334-78124353 | None:intergenic | 20.0% |
| !!! | TAAGTTTAAGTTCAAATTTG+AGG | + | chr6.3:78123916-78123935 | None:intergenic | 20.0% |
| !!! | TGTACAAAAATATTGTTGTT+AGG | - | chr6.3:78121126-78121145 | MS.gene51298:intron | 20.0% |
| !!! | TTTTTCTGAAATCAGATTTT+GGG | - | chr6.3:78124196-78124215 | MS.gene51298:intron | 20.0% |
| !!! | TTTTTGTCTTATACGATTTT+TGG | + | chr6.3:78122013-78122032 | None:intergenic | 20.0% |
| ! | AAACAAATTCATGTTAAGAG+TGG | - | chr6.3:78125033-78125052 | MS.gene51298:intron | 25.0% |
| ! | AATCAAATTTGGCATCTTTA+TGG | + | chr6.3:78122222-78122241 | None:intergenic | 25.0% |
| ! | AATTCACACATTCAACATAT+TGG | + | chr6.3:78124971-78124990 | None:intergenic | 25.0% |
| ! | AATTGGAGATTTCATATTGA+CGG | + | chr6.3:78121433-78121452 | None:intergenic | 25.0% |
| ! | ATCAAATATTTACAGTCATG+TGG | + | chr6.3:78121155-78121174 | None:intergenic | 25.0% |
| ! | ATTCAACATATTGGTCATAT+CGG | + | chr6.3:78124962-78124981 | None:intergenic | 25.0% |
| ! | CACCAATTAAAATGAATTAG+AGG | + | chr6.3:78124501-78124520 | None:intergenic | 25.0% |
| ! | GTCATCTCTTAATTCTTATT+AGG | + | chr6.3:78121020-78121039 | None:intergenic | 25.0% |
| ! | TAGTATTATACTTTACTTCG+TGG | - | chr6.3:78124450-78124469 | MS.gene51298:intron | 25.0% |
| ! | TCTATAGTACAACTAAAAGT+GGG | + | chr6.3:78122944-78122963 | None:intergenic | 25.0% |
| ! | TGACATTATATGCTAGATAT+TGG | - | chr6.3:78124474-78124493 | MS.gene51298:intron | 25.0% |
| ! | TGTACTATAGACTATGAAAT+AGG | - | chr6.3:78122953-78122972 | MS.gene51298:intron | 25.0% |
| ! | TTCAGAAGAATGATAAATTG+AGG | + | chr6.3:78124310-78124329 | None:intergenic | 25.0% |
| !! | AATCTAGCTTATGAAAATTG+AGG | - | chr6.3:78121087-78121106 | MS.gene51298:intron | 25.0% |
| !! | ATCTAGCTTATGAAAATTGA+GGG | - | chr6.3:78121088-78121107 | MS.gene51298:intron | 25.0% |
| !! | CTAGCAATATTTTCTATAGA+TGG | + | chr6.3:78125320-78125339 | None:intergenic | 25.0% |
| !! | TGATTTGTAAGATTGTTTCT+GGG | - | chr6.3:78121887-78121906 | MS.gene51298:intron | 25.0% |
| !!! | AACATTTGGCTTTGTATAAT+AGG | - | chr6.3:78123196-78123215 | MS.gene51298:intron | 25.0% |
| !!! | ACATTTGGCTTTGTATAATA+GGG | - | chr6.3:78123197-78123216 | MS.gene51298:intron | 25.0% |
| !!! | ATATTGATTCTGATGATATG+TGG | + | chr6.3:78125288-78125307 | None:intergenic | 25.0% |
| !!! | CTTACAACTCTTTTAAGAAA+AGG | + | chr6.3:78120860-78120879 | None:intergenic | 25.0% |
| !!! | GATGACTTAGTTTTTGAATT+CGG | - | chr6.3:78124865-78124884 | MS.gene51298:intron | 25.0% |
| !!! | GTCCTCTAATTCATTTTAAT+TGG | - | chr6.3:78124496-78124515 | MS.gene51298:intron | 25.0% |
| !!! | TTGATTTGTAAGATTGTTTC+TGG | - | chr6.3:78121886-78121905 | MS.gene51298:intron | 25.0% |
| AAAGGAAATCCATTTGCATT+TGG | + | chr6.3:78125413-78125432 | None:intergenic | 30.0% | |
| AAGGTTGTTTAATATGGATC+CGG | + | chr6.3:78121335-78121354 | None:intergenic | 30.0% | |
| AGTATCATACCTGTGAAAAT+TGG | + | chr6.3:78121766-78121785 | None:intergenic | 30.0% | |
| ATAAGATCGTATACTCATAC+TGG | - | chr6.3:78124749-78124768 | MS.gene51298:intron | 30.0% | |
| ATACACAAAATGGAATGAGT+TGG | - | chr6.3:78124573-78124592 | MS.gene51298:intron | 30.0% | |
| ATATATACCTCTCTTAGCTT+TGG | + | chr6.3:78123651-78123670 | None:intergenic | 30.0% | |
| ATGCTAGTAGAACATGTTAA+AGG | + | chr6.3:78124105-78124124 | None:intergenic | 30.0% | |
| ATTCTACTACCTGTGAAAAT+TGG | + | chr6.3:78122326-78122345 | None:intergenic | 30.0% | |
| CAAATCAAACACTTTACAAC+TGG | + | chr6.3:78121874-78121893 | None:intergenic | 30.0% | |
| CTATAGTACAACTAAAAGTG+GGG | + | chr6.3:78122943-78122962 | None:intergenic | 30.0% | |
| CTGCCAATTTATAAATGGTA+TGG | + | chr6.3:78124524-78124543 | None:intergenic | 30.0% | |
| GTATCATACCTGTGAAAATT+GGG | + | chr6.3:78121765-78121784 | None:intergenic | 30.0% | |
| GTCTATAGTACAACTAAAAG+TGG | + | chr6.3:78122945-78122964 | None:intergenic | 30.0% | |
| GTGCCATACCATTTATAAAT+TGG | - | chr6.3:78124518-78124537 | MS.gene51298:intron | 30.0% | |
| TAATCTATGATTCCATTGAG+AGG | + | chr6.3:78123390-78123409 | None:intergenic | 30.0% | |
| TAATGCAAAGCTTCATAGTT+AGG | + | chr6.3:78121501-78121520 | None:intergenic | 30.0% | |
| TACAACTCATATTCAGCAAA+AGG | - | chr6.3:78121731-78121750 | MS.gene51298:CDS | 30.0% | |
| TCAACAAGACTTATGCTTAT+AGG | + | chr6.3:78122368-78122387 | None:intergenic | 30.0% | |
| TGCTAGTAGAACATGTTAAA+GGG | + | chr6.3:78124104-78124123 | None:intergenic | 30.0% | |
| TTAGCATAAAAATAGGCTCT+AGG | + | chr6.3:78123717-78123736 | None:intergenic | 30.0% | |
| TTCAATTCTCCAGAAAGTAA+TGG | + | chr6.3:78122548-78122567 | None:intergenic | 30.0% | |
| TTCTACTACCTGTGAAAATT+GGG | + | chr6.3:78122325-78122344 | None:intergenic | 30.0% | |
| TTTGCTGAATATGAGTTGTA+AGG | + | chr6.3:78121731-78121750 | None:intergenic | 30.0% | |
| ! | GCTCTTAAAAGCACATATTA+AGG | + | chr6.3:78123169-78123188 | None:intergenic | 30.0% |
| ! | TAAGAGCACACATTAACATT+TGG | - | chr6.3:78123182-78123201 | MS.gene51298:intron | 30.0% |
| ! | TAGCTCTGCCAATTTATAAA+TGG | + | chr6.3:78124529-78124548 | None:intergenic | 30.0% |
| ! | TGCACAAGTTGAATTAGATT+TGG | + | chr6.3:78125011-78125030 | None:intergenic | 30.0% |
| !! | AATGCAAATGGATTTCCTTT+TGG | - | chr6.3:78125413-78125432 | MS.gene51298:intron | 30.0% |
| !! | AATTAGATTTGGATTTGCTG+CGG | + | chr6.3:78125000-78125019 | None:intergenic | 30.0% |
| !! | AATTTTAGGTGATCAAACTG+TGG | - | chr6.3:78125226-78125245 | MS.gene51298:CDS | 30.0% |
| !! | ACTACAATCTCTAGCTTTAT+AGG | + | chr6.3:78122434-78122453 | None:intergenic | 30.0% |
| !! | ACTAGTTTCTTTTTGCAGAA+AGG | - | chr6.3:78123417-78123436 | MS.gene51298:CDS | 30.0% |
| !! | CTACAATCTCTAGCTTTATA+GGG | + | chr6.3:78122433-78122452 | None:intergenic | 30.0% |
| !!! | GTAGATAGTAGTTTTTTGCA+TGG | + | chr6.3:78120711-78120730 | None:intergenic | 30.0% |
| AAGATGGTCCAATGTTAAAC+CGG | - | chr6.3:78121313-78121332 | MS.gene51298:intron | 35.0% | |
| AATAATGCACAAATGGCTAG+TGG | - | chr6.3:78125353-78125372 | MS.gene51298:intron | 35.0% | |
| ACAGATCAGATCTTGTAGAA+TGG | + | chr6.3:78121823-78121842 | None:intergenic | 35.0% | |
| ACATAGTGAAGGAAAGAACT+GGG | - | chr6.3:78122516-78122535 | MS.gene51298:CDS | 35.0% | |
| AGATCAGATCTTGTAGAATG+GGG | + | chr6.3:78121821-78121840 | None:intergenic | 35.0% | |
| AGTTCACAGATAATTCTAGC+TGG | - | chr6.3:78122609-78122628 | MS.gene51298:intron | 35.0% | |
| ATATGGATCCGGTTTAACAT+TGG | + | chr6.3:78121324-78121343 | None:intergenic | 35.0% | |
| ATGTCAACTACGTGAATACA+TGG | + | chr6.3:78124820-78124839 | None:intergenic | 35.0% | |
| ATTAAGAATCCAAGCACCAA+GGG | - | chr6.3:78121693-78121712 | MS.gene51298:CDS | 35.0% | |
| CACAGGTATGATACTTACAT+TGG | - | chr6.3:78121771-78121790 | MS.gene51298:CDS | 35.0% | |
| CACATGATGAAAATGAGAAC+TGG | - | chr6.3:78122471-78122490 | MS.gene51298:CDS | 35.0% | |
| CAGATCAGATCTTGTAGAAT+GGG | + | chr6.3:78121822-78121841 | None:intergenic | 35.0% | |
| CTGAATATGAGTTGTAAGGT+TGG | + | chr6.3:78121727-78121746 | None:intergenic | 35.0% | |
| GAATGATAAATTGAGGTCCA+CGG | + | chr6.3:78124303-78124322 | None:intergenic | 35.0% | |
| GAATTGAACCTTACTATGAG+AGG | - | chr6.3:78122560-78122579 | MS.gene51298:intron | 35.0% | |
| GACAAGCAATAATGCACAAA+TGG | - | chr6.3:78125346-78125365 | MS.gene51298:intron | 35.0% | |
| GTACTTGAGCCAAATGAATA+AGG | - | chr6.3:78124387-78124406 | MS.gene51298:CDS | 35.0% | |
| GTTTGCGACTAAATTAGAGA+TGG | + | chr6.3:78122200-78122219 | None:intergenic | 35.0% | |
| TAATGAAGGTGACCTATTGA+TGG | + | chr6.3:78121677-78121696 | None:intergenic | 35.0% | |
| TACATAGTGAAGGAAAGAAC+TGG | - | chr6.3:78122515-78122534 | MS.gene51298:CDS | 35.0% | |
| TTGTGGTATGAATAGCTATG+CGG | + | chr6.3:78121465-78121484 | None:intergenic | 35.0% | |
| ! | AACATTGCTTTGTTAACCCA+AGG | - | chr6.3:78124622-78124641 | MS.gene51298:intron | 35.0% |
| ! | AACTTGTTTCTCATGGGTTA+GGG | - | chr6.3:78120985-78121004 | MS.gene51298:intron | 35.0% |
| ! | AATGAGTTGGAGGAAATTGA+TGG | - | chr6.3:78124586-78124605 | MS.gene51298:intron | 35.0% |
| ! | ATGAGTTGGAGGAAATTGAT+GGG | - | chr6.3:78124587-78124606 | MS.gene51298:intron | 35.0% |
| ! | ATTTGCTAAACGGTATGTAC+CGG | + | chr6.3:78122099-78122118 | None:intergenic | 35.0% |
| ! | CAAAGTGTTAGGATTCAAGA+AGG | - | chr6.3:78122683-78122702 | MS.gene51298:intron | 35.0% |
| ! | CAGATAATTCTAGCTGGATA+AGG | - | chr6.3:78122615-78122634 | MS.gene51298:intron | 35.0% |
| ! | CATATTGGTCATATCGGTTA+AGG | + | chr6.3:78124956-78124975 | None:intergenic | 35.0% |
| ! | CATTTTATAGCCGCTAGTTA+AGG | - | chr6.3:78123012-78123031 | MS.gene51298:intron | 35.0% |
| ! | TAAGCATTTTTGCCTCTCAA+TGG | - | chr6.3:78123375-78123394 | MS.gene51298:CDS | 35.0% |
| ! | TGAAATCAGATTTTGGGCAT+GGG | - | chr6.3:78124202-78124221 | MS.gene51298:intron | 35.0% |
| ! | TTGGAGAAGCATACACAAAA+TGG | - | chr6.3:78124563-78124582 | MS.gene51298:intron | 35.0% |
| ! | TTGTTGCGACACATTTTTGT+AGG | + | chr6.3:78123306-78123325 | None:intergenic | 35.0% |
| !! | AAAATAGGCTCTAGGAAATG+TGG | + | chr6.3:78123709-78123728 | None:intergenic | 35.0% |
| !! | ACTGTTTCTGGATGATTGTT+TGG | + | chr6.3:78125260-78125279 | None:intergenic | 35.0% |
| !! | ATCTCTAGCTTTATAGGGTA+AGG | + | chr6.3:78122428-78122447 | None:intergenic | 35.0% |
| !! | GAAGACTTGTTGGAACAATT+TGG | + | chr6.3:78122406-78122425 | None:intergenic | 35.0% |
| !! | GGTGTGTTTGATTTGCTAAA+CGG | + | chr6.3:78122109-78122128 | None:intergenic | 35.0% |
| !! | GTGGTTAACTTGTTTCTCAT+GGG | - | chr6.3:78120979-78120998 | MS.gene51298:intron | 35.0% |
| !! | TAACTTGTTTCTCATGGGTT+AGG | - | chr6.3:78120984-78121003 | MS.gene51298:intron | 35.0% |
| !! | TGTGGTTAACTTGTTTCTCA+TGG | - | chr6.3:78120978-78120997 | MS.gene51298:intron | 35.0% |
| !! | TTTGTTGTTAAGGATCATCG+TGG | - | chr6.3:78122719-78122738 | MS.gene51298:intron | 35.0% |
| !!! | TAGGTGAAGTTGGTTTTTTG+TGG | + | chr6.3:78121482-78121501 | None:intergenic | 35.0% |
| AAACATCATCCACCAATGCT+TGG | - | chr6.3:78123510-78123529 | MS.gene51298:CDS | 40.0% | |
| AAGGTTCCAAAGCTCCTAAA+AGG | + | chr6.3:78120841-78120860 | None:intergenic | 40.0% | |
| ACCACAAAATGATGGCTAAG+GGG | - | chr6.3:78123580-78123599 | MS.gene51298:CDS | 40.0% | |
| ACCACAACACCAAATGCAAA+TGG | - | chr6.3:78125401-78125420 | MS.gene51298:intron | 40.0% | |
| AGCTTTCCACCACAAAATGA+TGG | - | chr6.3:78123572-78123591 | MS.gene51298:CDS | 40.0% | |
| ATAGGGTAAGGAAGACTTGT+TGG | + | chr6.3:78122416-78122435 | None:intergenic | 40.0% | |
| ATTTGGTTAGGTGAGTGAAG+AGG | - | chr6.3:78121618-78121637 | MS.gene51298:intron | 40.0% | |
| CAATTCCACCTCTCATAGTA+AGG | + | chr6.3:78122571-78122590 | None:intergenic | 40.0% | |
| CACCACAAAATGATGGCTAA+GGG | - | chr6.3:78123579-78123598 | MS.gene51298:CDS | 40.0% | |
| CATACCTGTGAAAATTGGGA+GGG | + | chr6.3:78121761-78121780 | None:intergenic | 40.0% | |
| CATCTTTCCCTATCTTCTCT+AGG | + | chr6.3:78123551-78123570 | None:intergenic | 40.0% | |
| CATTAAGAATCCAAGCACCA+AGG | - | chr6.3:78121692-78121711 | MS.gene51298:CDS | 40.0% | |
| CTAGAGAAGATAGGGAAAGA+TGG | - | chr6.3:78123549-78123568 | MS.gene51298:CDS | 40.0% | |
| CTAGAGATTGTAGTGCTTGA+TGG | - | chr6.3:78122440-78122459 | MS.gene51298:CDS | 40.0% | |
| GATAAGGAGCAGGAAGTTTA+GGG | - | chr6.3:78122631-78122650 | MS.gene51298:intron | 40.0% | |
| GATCGTATACTCATACTGGT+TGG | - | chr6.3:78124753-78124772 | MS.gene51298:intron | 40.0% | |
| GCTTCATAGTTAGGTGAAGT+TGG | + | chr6.3:78121492-78121511 | None:intergenic | 40.0% | |
| GGTGCTTGGATTCTTAATGA+AGG | + | chr6.3:78121691-78121710 | None:intergenic | 40.0% | |
| GTGAACTCTATGTCTCCAAT+TGG | + | chr6.3:78122596-78122615 | None:intergenic | 40.0% | |
| TATGTGGTTGCTACTGTTTC+TGG | + | chr6.3:78125272-78125291 | None:intergenic | 40.0% | |
| TCATACCTGTGAAAATTGGG+AGG | + | chr6.3:78121762-78121781 | None:intergenic | 40.0% | |
| TCCAAAGCTCCTAAAAGGTT+CGG | + | chr6.3:78120836-78120855 | None:intergenic | 40.0% | |
| TGAACCCATTAATGTCCCTA+GGG | + | chr6.3:78125487-78125506 | None:intergenic | 40.0% | |
| TGATACTCCAAAGCTAAGAG+AGG | - | chr6.3:78123641-78123660 | MS.gene51298:CDS | 40.0% | |
| TGCATCTGTGTCAAATGTCA+TGG | + | chr6.3:78120898-78120917 | None:intergenic | 40.0% | |
| TGTGAGTCTTGAGTAGTAGA+TGG | + | chr6.3:78124426-78124445 | None:intergenic | 40.0% | |
| TTGAACCTTACTATGAGAGG+TGG | - | chr6.3:78122563-78122582 | MS.gene51298:intron | 40.0% | |
| ! | AACTTCGTCCCAATTTTCAC+AGG | - | chr6.3:78122314-78122333 | MS.gene51298:intron | 40.0% |
| ! | AAGGTTGGTTGTTTATCCCT+TGG | + | chr6.3:78121712-78121731 | None:intergenic | 40.0% |
| ! | ATGCAATGACTTGTGACATG+GGG | - | chr6.3:78124260-78124279 | MS.gene51298:intron | 40.0% |
| ! | CAAAACATGCCGAACCTTTT+AGG | - | chr6.3:78120824-78120843 | MS.gene51298:intron | 40.0% |
| ! | CACAAAATGGAATGAGTTGG+AGG | - | chr6.3:78124576-78124595 | MS.gene51298:intron | 40.0% |
| ! | CATGCAATGACTTGTGACAT+GGG | - | chr6.3:78124259-78124278 | MS.gene51298:intron | 40.0% |
| ! | CTGAAATCAGATTTTGGGCA+TGG | - | chr6.3:78124201-78124220 | MS.gene51298:intron | 40.0% |
| ! | GAAATCAGATTTTGGGCATG+GGG | - | chr6.3:78124203-78124222 | MS.gene51298:intron | 40.0% |
| ! | GAAGTTTAGGGTTGCAGTTA+TGG | - | chr6.3:78122643-78122662 | MS.gene51298:intron | 40.0% |
| ! | GTGGGAGTAATCAAAGTGTT+AGG | - | chr6.3:78122672-78122691 | MS.gene51298:intron | 40.0% |
| ! | TGAGTTGGAGGAAATTGATG+GGG | - | chr6.3:78124588-78124607 | MS.gene51298:intron | 40.0% |
| !! | GACTGAGGCATTTGTTGTTA+AGG | - | chr6.3:78122709-78122728 | MS.gene51298:intron | 40.0% |
| !! | TCCATTTGCATTTGGTGTTG+TGG | + | chr6.3:78125405-78125424 | None:intergenic | 40.0% |
| !! | TGCATTTGGTGTTGTGGTAT+AGG | + | chr6.3:78125399-78125418 | None:intergenic | 40.0% |
| ACATGGGGAGCAAGATCTAT+AGG | - | chr6.3:78124275-78124294 | MS.gene51298:intron | 45.0% | |
| AGAGGTGGAATTGCACCAAT+TGG | - | chr6.3:78122578-78122597 | MS.gene51298:intron | 45.0% | |
| AGTAGAATACTCGACGCTGA+AGG | - | chr6.3:78122338-78122357 | MS.gene51298:intron | 45.0% | |
| AGTGCGTACGAAGCTAAAGA+AGG | + | chr6.3:78120628-78120647 | None:intergenic | 45.0% | |
| CCACACAAGACATGTTGTAG+TGG | - | chr6.3:78124786-78124805 | MS.gene51298:intron | 45.0% | |
| CCACCACAAAATGATGGCTA+AGG | - | chr6.3:78123578-78123597 | MS.gene51298:CDS | 45.0% | |
| CCACTACAACATGTCTTGTG+TGG | + | chr6.3:78124789-78124808 | None:intergenic | 45.0% | |
| CTATGCGGAACTACTGCAAT+TGG | + | chr6.3:78121450-78121469 | None:intergenic | 45.0% | |
| CTGTCCCTAGGGACATTAAT+GGG | - | chr6.3:78125480-78125499 | MS.gene51298:CDS | 45.0% | |
| GAAGAGGTGGATAGAGCAAT+TGG | - | chr6.3:78121634-78121653 | MS.gene51298:intron | 45.0% | |
| GAAGGTGACCTATTGATGGA+AGG | + | chr6.3:78121673-78121692 | None:intergenic | 45.0% | |
| GCTTTCCACCTTCCATCAAT+AGG | - | chr6.3:78121662-78121681 | MS.gene51298:intron | 45.0% | |
| GGATAAGGAGCAGGAAGTTT+AGG | - | chr6.3:78122630-78122649 | MS.gene51298:intron | 45.0% | |
| GGGAAGAGACCATTACTTTC+TGG | - | chr6.3:78122536-78122555 | MS.gene51298:CDS | 45.0% | |
| GGTCTCATTCGTTTGTCGTT+TGG | + | chr6.3:78120607-78120626 | None:intergenic | 45.0% | |
| GTGAACCCATTAATGTCCCT+AGG | + | chr6.3:78125488-78125507 | None:intergenic | 45.0% | |
| TCACAGGCTCACAATCAGAT+GGG | - | chr6.3:78125438-78125457 | MS.gene51298:CDS | 45.0% | |
| TCTGTCCCTAGGGACATTAA+TGG | - | chr6.3:78125479-78125498 | MS.gene51298:CDS | 45.0% | |
| TGGGGATGTCTGATAGAATG+TGG | - | chr6.3:78124221-78124240 | MS.gene51298:intron | 45.0% | |
| TGGGTTCACAAGGCAACTTT+AGG | - | chr6.3:78125499-78125518 | MS.gene51298:CDS | 45.0% | |
| TTCACAGGCTCACAATCAGA+TGG | - | chr6.3:78125437-78125456 | MS.gene51298:CDS | 45.0% | |
| TTGCAGTTATGGTGAGTCGT+GGG | - | chr6.3:78122654-78122673 | MS.gene51298:intron | 45.0% | |
| ! | ACCTTCAAGTTCTGTCCCTA+GGG | - | chr6.3:78125469-78125488 | MS.gene51298:CDS | 45.0% |
| ! | AGCAAGATCTATAGGTACCG+TGG | - | chr6.3:78124283-78124302 | MS.gene51298:intron | 45.0% |
| ! | ATTCTAGCTGGATAAGGAGC+AGG | - | chr6.3:78122621-78122640 | MS.gene51298:intron | 45.0% |
| ! | CCTTAGCCATCATTTTGTGG+TGG | + | chr6.3:78123581-78123600 | None:intergenic | 45.0% |
| ! | CTTTCCCTCCCAATTTTCAC+AGG | - | chr6.3:78121754-78121773 | MS.gene51298:CDS | 45.0% |
| ! | GATTCAAGAAGGCATGACTG+AGG | - | chr6.3:78122694-78122713 | MS.gene51298:intron | 45.0% |
| ! | GCATGCAATGACTTGTGACA+TGG | - | chr6.3:78124258-78124277 | MS.gene51298:intron | 45.0% |
| ! | TCCCCTTAGCCATCATTTTG+TGG | + | chr6.3:78123584-78123603 | None:intergenic | 45.0% |
| !! | GGGACATTAATGGGTTCACA+AGG | - | chr6.3:78125489-78125508 | MS.gene51298:CDS | 45.0% |
| !! | GTTGTTTATCCCTTGGTGCT+TGG | + | chr6.3:78121705-78121724 | None:intergenic | 45.0% |
| !! | GTTTCTCATGGGTTAGGGTT+GGG | - | chr6.3:78120990-78121009 | MS.gene51298:intron | 45.0% |
| !! | TGTTTCTCATGGGTTAGGGT+TGG | - | chr6.3:78120989-78121008 | MS.gene51298:intron | 45.0% |
| !! | TTTCTCATGGGTTAGGGTTG+GGG | - | chr6.3:78120991-78121010 | MS.gene51298:intron | 45.0% |
| !!! | GGATTTCCTTTTGGCTTCAC+AGG | - | chr6.3:78125422-78125441 | MS.gene51298:intron | 45.0% |
| !!! | ATATTTTATTAAAAATAAGA+TGG | - | chr6.3:78121297-78121316 | MS.gene51298:intron | 5.0% |
| !!! | ATTCATTTTTTTATTAAAAA+TGG | + | chr6.3:78121245-78121264 | None:intergenic | 5.0% |
| CAATGCTTGGCGATGATGTG+TGG | - | chr6.3:78123523-78123542 | MS.gene51298:CDS | 50.0% | |
| CACAAATGGCTAGTGGTGAG+TGG | - | chr6.3:78125360-78125379 | MS.gene51298:intron | 50.0% | |
| CACACATCATCGCCAAGCAT+TGG | + | chr6.3:78123525-78123544 | None:intergenic | 50.0% | |
| CACAGGCTCACAATCAGATG+GGG | - | chr6.3:78125439-78125458 | MS.gene51298:CDS | 50.0% | |
| GGTGACCTATTGATGGAAGG+TGG | + | chr6.3:78121670-78121689 | None:intergenic | 50.0% | |
| GTTGCAGTTATGGTGAGTCG+TGG | - | chr6.3:78122653-78122672 | MS.gene51298:intron | 50.0% | |
| TCCCTAGGGACAGAACTTGA+AGG | + | chr6.3:78125473-78125492 | None:intergenic | 50.0% | |
| TGGTTAGGTGAGTGAAGAGG+TGG | - | chr6.3:78121621-78121640 | MS.gene51298:intron | 50.0% | |
| TGTGAGCCTGTGAAGCCAAA+AGG | + | chr6.3:78125431-78125450 | None:intergenic | 50.0% | |
| TGTGGCGCCTAGAGAAGATA+GGG | - | chr6.3:78123541-78123560 | MS.gene51298:CDS | 50.0% | |
| TTGGCTCAAGTACTCTCTGC+TGG | + | chr6.3:78124380-78124399 | None:intergenic | 50.0% | |
| ! | CACCTTCAAGTTCTGTCCCT+AGG | - | chr6.3:78125468-78125487 | MS.gene51298:CDS | 50.0% |
| !! | ACATCATCGCCAAGCATTGG+TGG | + | chr6.3:78123522-78123541 | None:intergenic | 50.0% |
| !! | CTGTCATGTGCTGCTTTGTC+CGG | - | chr6.3:78122077-78122096 | MS.gene51298:intron | 50.0% |
| !! | GCCGAACCTTTTAGGAGCTT+TGG | - | chr6.3:78120832-78120851 | MS.gene51298:intron | 50.0% |
| GTGTGGCGCCTAGAGAAGAT+AGG | - | chr6.3:78123540-78123559 | MS.gene51298:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 78120553 | 78125520 | 78120553 | ID=MS.gene51298 |
| chr6.3 | mRNA | 78120553 | 78125520 | 78120553 | ID=MS.gene51298.t1;Parent=MS.gene51298 |
| chr6.3 | exon | 78125435 | 78125520 | 78125435 | ID=MS.gene51298.t1.exon1;Parent=MS.gene51298.t1 |
| chr6.3 | CDS | 78125435 | 78125520 | 78125435 | ID=cds.MS.gene51298.t1;Parent=MS.gene51298.t1 |
| chr6.3 | exon | 78125199 | 78125274 | 78125199 | ID=MS.gene51298.t1.exon2;Parent=MS.gene51298.t1 |
| chr6.3 | CDS | 78125199 | 78125274 | 78125199 | ID=cds.MS.gene51298.t1;Parent=MS.gene51298.t1 |
| chr6.3 | exon | 78124298 | 78124445 | 78124298 | ID=MS.gene51298.t1.exon3;Parent=MS.gene51298.t1 |
| chr6.3 | CDS | 78124298 | 78124445 | 78124298 | ID=cds.MS.gene51298.t1;Parent=MS.gene51298.t1 |
| chr6.3 | exon | 78123327 | 78123737 | 78123327 | ID=MS.gene51298.t1.exon4;Parent=MS.gene51298.t1 |
| chr6.3 | CDS | 78123327 | 78123737 | 78123327 | ID=cds.MS.gene51298.t1;Parent=MS.gene51298.t1 |
| chr6.3 | exon | 78122411 | 78122571 | 78122411 | ID=MS.gene51298.t1.exon5;Parent=MS.gene51298.t1 |
| chr6.3 | CDS | 78122411 | 78122571 | 78122411 | ID=cds.MS.gene51298.t1;Parent=MS.gene51298.t1 |
| chr6.3 | exon | 78121665 | 78121862 | 78121665 | ID=MS.gene51298.t1.exon6;Parent=MS.gene51298.t1 |
| chr6.3 | CDS | 78121665 | 78121862 | 78121665 | ID=cds.MS.gene51298.t1;Parent=MS.gene51298.t1 |
| chr6.3 | exon | 78121430 | 78121529 | 78121430 | ID=MS.gene51298.t1.exon7;Parent=MS.gene51298.t1 |
| chr6.3 | CDS | 78121430 | 78121529 | 78121430 | ID=cds.MS.gene51298.t1;Parent=MS.gene51298.t1 |
| chr6.3 | exon | 78120553 | 78120839 | 78120553 | ID=MS.gene51298.t1.exon8;Parent=MS.gene51298.t1 |
| chr6.3 | CDS | 78120553 | 78120839 | 78120553 | ID=cds.MS.gene51298.t1;Parent=MS.gene51298.t1 |
| Gene Sequence |
| Protein sequence |
