Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05439.t1 | RHN52774.1 | 93.7 | 493 | 29 | 1 | 1 | 491 | 1 | 493 | 4.80E-270 | 939.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05439.t1 | Q9C9T2 | 46.7 | 480 | 222 | 11 | 1 | 476 | 1 | 450 | 6.5e-106 | 386.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05439.t1 | A0A396HLL0 | 93.7 | 493 | 29 | 1 | 1 | 491 | 1 | 493 | 3.5e-270 | 939.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051490 | MS.gene05439 | 0.814761 | 1.31E-51 | -1.69E-46 |
| MS.gene051831 | MS.gene05439 | 0.803315 | 3.70E-49 | -1.69E-46 |
| MS.gene053643 | MS.gene05439 | 0.802998 | 4.30E-49 | -1.69E-46 |
| MS.gene05410 | MS.gene05439 | 0.815949 | 7.11E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene054892 | 0.853701 | 2.01E-61 | -1.69E-46 |
| MS.gene05439 | MS.gene054893 | 0.852446 | 4.59E-61 | -1.69E-46 |
| MS.gene05439 | MS.gene055222 | 0.806778 | 6.97E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene055226 | 0.819207 | 1.31E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene058429 | 0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene059170 | 0.802152 | 6.42E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene060412 | 0.828971 | 6.68E-55 | -1.69E-46 |
| MS.gene05439 | MS.gene060413 | 0.842264 | 2.87E-58 | -1.69E-46 |
| MS.gene05439 | MS.gene060520 | 0.828154 | 1.05E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene060840 | 0.812631 | 3.85E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene060850 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene060851 | 0.820863 | 5.48E-53 | -1.69E-46 |
| MS.gene05439 | MS.gene060852 | 0.821717 | 3.48E-53 | -1.69E-46 |
| MS.gene05439 | MS.gene062327 | 0.807045 | 6.12E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene065460 | 0.805904 | 1.07E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene065752 | 0.873596 | 1.30E-67 | -1.69E-46 |
| MS.gene05439 | MS.gene065886 | 0.826413 | 2.75E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene066513 | 0.802918 | 4.47E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene069840 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene070275 | 0.829094 | 6.24E-55 | -1.69E-46 |
| MS.gene05439 | MS.gene071551 | 0.811695 | 6.15E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene073306 | 0.813667 | 2.28E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene073428 | 0.829015 | 6.52E-55 | -1.69E-46 |
| MS.gene05439 | MS.gene074100 | 0.852311 | 5.02E-61 | -1.69E-46 |
| MS.gene05439 | MS.gene20608 | 0.807742 | 4.36E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene21770 | 0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene23464 | 0.826282 | 2.95E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene25879 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene27997 | 0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene28798 | 0.800729 | 1.26E-48 | -1.69E-46 |
| MS.gene05439 | MS.gene28904 | 0.804322 | 2.28E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene29036 | 0.80656 | 7.75E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene29096 | 0.807824 | 4.19E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene29428 | 0.818467 | 1.93E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene29969 | 0.802125 | 6.51E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene30397 | 0.818055 | 2.39E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene31551 | 0.800113 | 1.68E-48 | -1.69E-46 |
| MS.gene05439 | MS.gene31648 | 0.806119 | 9.60E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene31738 | 0.806436 | 8.24E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene31855 | 0.814419 | 1.56E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene32409 | 0.853177 | 2.84E-61 | -1.69E-46 |
| MS.gene05439 | MS.gene32411 | 0.810134 | 1.34E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene32801 | 0.80201 | 6.87E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene33056 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene33651 | 0.833155 | 6.27E-56 | -1.69E-46 |
| MS.gene05439 | MS.gene36571 | 0.803693 | 3.09E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene36870 | 0.819345 | 1.22E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene36981 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene39665 | 0.839572 | 1.46E-57 | -1.69E-46 |
| MS.gene05439 | MS.gene40121 | 0.825394 | 4.80E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene40123 | 0.843545 | 1.31E-58 | -1.69E-46 |
| MS.gene05439 | MS.gene41597 | 0.803185 | 3.93E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene43381 | 0.847531 | 1.09E-59 | -1.69E-46 |
| MS.gene05439 | MS.gene45290 | 0.801188 | 1.01E-48 | -1.69E-46 |
| MS.gene05439 | MS.gene46128 | 0.817749 | 2.81E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene46131 | 0.834291 | 3.26E-56 | -1.69E-46 |
| MS.gene05439 | MS.gene47134 | 0.838258 | 3.20E-57 | -1.69E-46 |
| MS.gene05439 | MS.gene47195 | 0.807958 | 3.92E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene47826 | 0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene50934 | 0.802525 | 5.38E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene51298 | 0.812808 | 3.52E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene51300 | 0.911397 | 6.37E-83 | -1.69E-46 |
| MS.gene05439 | MS.gene54377 | 0.814849 | 1.25E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene54380 | 0.812146 | 4.91E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene54382 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene54703 | 0.817259 | 3.62E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene55496 | 0.831014 | 2.12E-55 | -1.69E-46 |
| MS.gene05439 | MS.gene55717 | 0.802998 | 4.30E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene56300 | 0.801875 | 7.32E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene57128 | 0.815223 | 1.03E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene58653 | 0.827986 | 1.16E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene59030 | 0.827107 | 1.88E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene61162 | 0.802462 | 5.55E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene62676 | 0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene64284 | 0.824352 | 8.45E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene65858 | 0.805243 | 1.47E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene69691 | 0.804805 | 1.81E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene69692 | 0.818144 | 2.28E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene71803 | 0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene72748 | 0.832268 | 1.04E-55 | -1.69E-46 |
| MS.gene05439 | MS.gene73557 | 0.903805 | 2.37E-79 | -1.69E-46 |
| MS.gene05439 | MS.gene73678 | 0.811506 | 6.77E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene74452 | 0.813469 | 2.52E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene75206 | 0.80385 | 2.86E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene77971 | -0.801943 | 7.09E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene79120 | 0.801579 | 8.43E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene80557 | 0.819681 | 1.02E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene80821 | 0.898239 | 6.45E-77 | -1.69E-46 |
| MS.gene05439 | MS.gene82451 | 0.818299 | 2.11E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene83022 | 0.80248 | 5.50E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene83687 | 0.827669 | 1.38E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene83853 | 0.876313 | 1.54E-68 | -1.69E-46 |
| MS.gene05439 | MS.gene84162 | 0.810248 | 1.27E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene84165 | 0.826462 | 2.68E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene86455 | 0.826859 | 2.15E-54 | -1.69E-46 |
| MS.gene05439 | MS.gene89340 | 0.814406 | 1.57E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene90604 | 0.806309 | 8.76E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene91006 | 0.806642 | 7.45E-50 | -1.69E-46 |
| MS.gene05439 | MS.gene92336 | 0.822122 | 2.80E-53 | -1.69E-46 |
| MS.gene05439 | MS.gene92364 | 0.814556 | 1.45E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene92646 | 0.812567 | 3.97E-51 | -1.69E-46 |
| MS.gene05439 | MS.gene94111 | 0.819739 | 9.92E-53 | -1.69E-46 |
| MS.gene05439 | MS.gene95936 | 0.802726 | 4.89E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene96973 | 0.832351 | 9.93E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05439.t1 | MTR_6g083730 | 91.684 | 493 | 31 | 2 | 1 | 491 | 1 | 485 | 0.0 | 934 |
| MS.gene05439.t1 | MTR_8g104510 | 62.994 | 481 | 165 | 10 | 1 | 476 | 1 | 473 | 0.0 | 598 |
| MS.gene05439.t1 | MTR_6g083320 | 93.645 | 299 | 17 | 1 | 1 | 297 | 1 | 299 | 0.0 | 575 |
| MS.gene05439.t1 | MTR_6g083320 | 84.091 | 132 | 13 | 1 | 360 | 491 | 296 | 419 | 3.45e-71 | 232 |
| MS.gene05439.t1 | MTR_8g104490 | 62.222 | 495 | 171 | 13 | 1 | 489 | 1 | 485 | 0.0 | 575 |
| MS.gene05439.t1 | MTR_8g104490 | 63.380 | 426 | 142 | 11 | 69 | 489 | 4 | 420 | 8.54e-179 | 508 |
| MS.gene05439.t1 | MTR_4g128600 | 45.411 | 414 | 206 | 9 | 4 | 412 | 14 | 412 | 1.95e-115 | 353 |
| MS.gene05439.t1 | MTR_4g090970 | 46.582 | 395 | 195 | 8 | 2 | 390 | 13 | 397 | 1.45e-113 | 348 |
| MS.gene05439.t1 | MTR_2g011810 | 45.202 | 396 | 202 | 7 | 1 | 390 | 12 | 398 | 2.28e-112 | 346 |
| MS.gene05439.t1 | MTR_2g450080 | 41.798 | 445 | 232 | 9 | 4 | 440 | 11 | 436 | 2.09e-108 | 334 |
| MS.gene05439.t1 | MTR_4g106810 | 47.059 | 306 | 153 | 7 | 14 | 318 | 9 | 306 | 3.31e-81 | 262 |
| MS.gene05439.t1 | MTR_6g083810 | 91.791 | 134 | 9 | 1 | 1 | 132 | 1 | 134 | 6.50e-81 | 248 |
| MS.gene05439.t1 | MTR_7g112000 | 34.857 | 350 | 209 | 9 | 50 | 393 | 44 | 380 | 1.73e-49 | 177 |
| MS.gene05439.t1 | MTR_7g111960 | 33.918 | 342 | 213 | 9 | 46 | 381 | 56 | 390 | 4.71e-46 | 169 |
| MS.gene05439.t1 | MTR_7g111980 | 34.125 | 337 | 201 | 8 | 50 | 379 | 59 | 381 | 5.33e-45 | 166 |
| MS.gene05439.t1 | MTR_7g111980 | 36.271 | 295 | 175 | 7 | 92 | 379 | 10 | 298 | 1.61e-43 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05439.t1 | AT1G73805 | 49.792 | 480 | 207 | 11 | 1 | 476 | 1 | 450 | 3.57e-148 | 431 |
| MS.gene05439.t1 | AT5G57580 | 41.031 | 524 | 247 | 15 | 9 | 485 | 17 | 525 | 2.52e-116 | 356 |
| MS.gene05439.t1 | AT4G25800 | 45.876 | 388 | 192 | 7 | 4 | 385 | 2 | 377 | 1.14e-110 | 340 |
| MS.gene05439.t1 | AT4G25800 | 45.876 | 388 | 192 | 7 | 4 | 385 | 2 | 377 | 1.14e-110 | 340 |
| MS.gene05439.t1 | AT2G18750 | 39.619 | 472 | 260 | 10 | 4 | 460 | 16 | 477 | 9.97e-109 | 336 |
| MS.gene05439.t1 | AT2G18750 | 39.619 | 472 | 260 | 10 | 4 | 460 | 16 | 477 | 9.97e-109 | 336 |
| MS.gene05439.t1 | AT2G18750 | 39.619 | 472 | 260 | 10 | 4 | 460 | 16 | 477 | 9.97e-109 | 336 |
| MS.gene05439.t1 | AT2G24300 | 42.526 | 388 | 214 | 6 | 4 | 387 | 3 | 385 | 1.75e-95 | 301 |
| MS.gene05439.t1 | AT2G24300 | 42.526 | 388 | 214 | 6 | 4 | 387 | 7 | 389 | 1.82e-95 | 301 |
| MS.gene05439.t1 | AT4G31000 | 40.984 | 427 | 229 | 11 | 11 | 425 | 13 | 428 | 6.98e-95 | 298 |
| MS.gene05439.t1 | AT5G62570 | 37.405 | 393 | 221 | 9 | 1 | 384 | 1 | 377 | 1.67e-84 | 270 |
| MS.gene05439.t1 | AT5G62570 | 38.133 | 375 | 207 | 9 | 1 | 366 | 1 | 359 | 3.93e-84 | 265 |
| MS.gene05439.t1 | AT2G24300 | 43.713 | 334 | 181 | 5 | 58 | 387 | 8 | 338 | 6.06e-84 | 270 |
| MS.gene05439.t1 | AT5G62570 | 38.950 | 362 | 200 | 8 | 32 | 384 | 13 | 362 | 2.21e-82 | 264 |
| MS.gene05439.t1 | AT4G31000 | 38.259 | 379 | 198 | 10 | 58 | 425 | 54 | 407 | 3.06e-71 | 236 |
| MS.gene05439.t1 | AT5G62570 | 40.264 | 303 | 161 | 7 | 1 | 298 | 1 | 288 | 4.56e-68 | 220 |
| MS.gene05439.t1 | AT5G26920 | 35.278 | 360 | 213 | 7 | 29 | 384 | 24 | 367 | 2.15e-67 | 223 |
| MS.gene05439.t1 | AT5G26920 | 35.278 | 360 | 213 | 7 | 29 | 384 | 24 | 367 | 1.26e-66 | 224 |
| MS.gene05439.t1 | AT5G26920 | 35.000 | 360 | 206 | 8 | 29 | 384 | 24 | 359 | 3.29e-63 | 215 |
Find 114 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGACTTGTTGGAACAATT+TGG | 0.268874 | 6.1:+73450607 | None:intergenic |
| GGGAAGAGACCATTACTTTC+TGG | 0.273521 | 6.1:-73450474 | MS.gene05439:CDS |
| TCAGAGTTATATAGACAAAT+TGG | 0.277663 | 6.1:-73448182 | MS.gene05439:intron |
| GCTTTAATTAATTTGCATAT+TGG | 0.279068 | 6.1:+73448390 | None:intergenic |
| ACCACAATCTCTAGCTTTAT+AGG | 0.281295 | 6.1:+73450579 | None:intergenic |
| AGTTTCATACCTGTGAAAAT+TGG | 0.291885 | 6.1:+73452518 | None:intergenic |
| GGATAAAGTGCAGGAAGTTC+AGG | 0.308330 | 6.1:-73450380 | MS.gene05439:CDS |
| ACTGTTGCTGGATGATTGTT+TGG | 0.310236 | 6.1:+73447480 | None:intergenic |
| TATGTTGTTGCTACTGTTGC+TGG | 0.313492 | 6.1:+73447468 | None:intergenic |
| TAATCAAGGTGTTAGGATTC+AGG | 0.316777 | 6.1:-73450331 | MS.gene05439:CDS |
| TGCATTTGGTGTTGTGGTAT+AGG | 0.318778 | 6.1:+73447341 | None:intergenic |
| AATGCAAATGGATTTCCTTT+TGG | 0.323071 | 6.1:-73447324 | MS.gene05439:CDS |
| TATCATCAGAATCAATATTA+TGG | 0.324552 | 6.1:-73447447 | MS.gene05439:CDS |
| TATATTGTACCTTATTCATT+TGG | 0.345403 | 6.1:+73448325 | None:intergenic |
| TTGGAGAAGCATACACAAAA+TGG | 0.358634 | 6.1:-73448159 | MS.gene05439:CDS |
| CTAGAGATTGTGGTACTTGA+TGG | 0.361616 | 6.1:-73450570 | MS.gene05439:CDS |
| AAAGGAAATCCATTTGCATT+TGG | 0.365748 | 6.1:+73447327 | None:intergenic |
| GATTTCATTCGTTTGTCGTT+TGG | 0.366146 | 6.1:+73453708 | None:intergenic |
| GTACTTGAACCAAATGAATA+AGG | 0.370265 | 6.1:-73448334 | MS.gene05439:intron |
| GAAGAGGTGGATAGAGCAAT+TGG | 0.372285 | 6.1:-73452647 | MS.gene05439:CDS |
| GACTGAGGCATTTGTTGTTA+AGG | 0.376185 | 6.1:-73450301 | MS.gene05439:CDS |
| ATATATACCTCTCTTAGCTT+TGG | 0.376627 | 6.1:+73449038 | None:intergenic |
| CCACAATCTCTAGCTTTATA+GGG | 0.385020 | 6.1:+73450580 | None:intergenic |
| GCTTTCCACCTTCCATCAAT+AGG | 0.389606 | 6.1:-73452619 | MS.gene05439:CDS |
| ATAGGGTAAGGAAGACTTGT+TGG | 0.390458 | 6.1:+73450597 | None:intergenic |
| CTGTCCCTAGGGACATTAAT+GGG | 0.391628 | 6.1:-73447257 | MS.gene05439:CDS |
| TCTGTCCCTAGGGACATTAA+TGG | 0.395267 | 6.1:-73447258 | MS.gene05439:CDS |
| GTTGTTGATCCCTTGGTGCT+TGG | 0.401027 | 6.1:+73452579 | None:intergenic |
| GAAGTTCAGGGTTGCAGTTA+AGG | 0.401158 | 6.1:-73450367 | MS.gene05439:CDS |
| GTTTCATACCTGTGAAAATT+GGG | 0.401177 | 6.1:+73452519 | None:intergenic |
| TAATGAAGGTGACCTATTGA+TGG | 0.408912 | 6.1:+73452607 | None:intergenic |
| AGAGGTGGAATTGCACCAAT+TGG | 0.409164 | 6.1:-73450432 | MS.gene05439:CDS |
| GTGTGGCGCCTAGAGAAGAT+AGG | 0.412903 | 6.1:-73449146 | MS.gene05439:CDS |
| TACATAGTGAAGGAAAGAAC+TGG | 0.419237 | 6.1:-73450495 | MS.gene05439:CDS |
| TACAACTCTCATTCAACAAA+AGG | 0.425881 | 6.1:-73452550 | MS.gene05439:CDS |
| CACATGATGAAAATGAGAAC+TGG | 0.432538 | 6.1:-73450539 | MS.gene05439:CDS |
| AAGGTTGGTTGTTGATCCCT+TGG | 0.434839 | 6.1:+73452572 | None:intergenic |
| GAGGTGGAATTGCACCAATT+GGG | 0.439927 | 6.1:-73450431 | MS.gene05439:CDS |
| CATCTTTCCCTATCTTCTCT+AGG | 0.450984 | 6.1:+73449138 | None:intergenic |
| ATGGAAGTAATCAAGGTGTT+AGG | 0.454647 | 6.1:-73450338 | MS.gene05439:CDS |
| ACCACAACACCAAATGCAAA+TGG | 0.454821 | 6.1:-73447336 | MS.gene05439:CDS |
| GCCAAGCAATAATGTACAAA+TGG | 0.456056 | 6.1:-73447391 | MS.gene05439:CDS |
| ATCTCTAGCTTTATAGGGTA+AGG | 0.456668 | 6.1:+73450585 | None:intergenic |
| GCCATTTGTACATTATTGCT+TGG | 0.457120 | 6.1:+73447390 | None:intergenic |
| ACATGGGGAGCAAGATCTAT+AGG | 0.460309 | 6.1:-73448446 | MS.gene05439:CDS |
| TTAATTAAAGCTAATATCAA+TGG | 0.468078 | 6.1:-73448378 | MS.gene05439:CDS |
| TTTGTTGAATGAGAGTTGTA+AGG | 0.470397 | 6.1:+73452553 | None:intergenic |
| TCCATTTGCATTTGGTGTTG+TGG | 0.474676 | 6.1:+73447335 | None:intergenic |
| GCATATTGGATTCAGAAGAA+TGG | 0.478493 | 6.1:+73448404 | None:intergenic |
| AATGAGTTGGAGGAAATTGA+TGG | 0.479528 | 6.1:-73448136 | MS.gene05439:CDS |
| CAATTCCACCTCTCATAGTA+AGG | 0.486241 | 6.1:+73450442 | None:intergenic |
| CCACCACAAAATGATGGCTA+AGG | 0.503068 | 6.1:-73449108 | MS.gene05439:CDS |
| CACAAAATGGAATGAGTTGG+AGG | 0.508685 | 6.1:-73448146 | MS.gene05439:CDS |
| CACACATCATCGCCAAGCAT+TGG | 0.517632 | 6.1:+73449164 | None:intergenic |
| GTGAGTCATGGAAGTAATCA+AGG | 0.521196 | 6.1:-73450345 | MS.gene05439:CDS |
| AAACATCATCCACCAATGCT+TGG | 0.524035 | 6.1:-73449176 | MS.gene05439:CDS |
| AGTTCACAGATAACTCTAGC+TGG | 0.524233 | 6.1:-73450401 | MS.gene05439:CDS |
| CCCTATAAAGCTAGAGATTG+TGG | 0.525360 | 6.1:-73450580 | MS.gene05439:CDS |
| AACATTGCTTTGTTAACCCA+AGG | 0.527734 | 6.1:-73448100 | MS.gene05439:intron |
| TGGTTAGGTGAGTGAAGAGG+TGG | 0.534317 | 6.1:-73452660 | MS.gene05439:intron |
| GGTGCTTGGATTCTTAATGA+AGG | 0.535525 | 6.1:+73452593 | None:intergenic |
| ACCTTCAAGTTCTGTCCCTA+GGG | 0.537786 | 6.1:-73447268 | MS.gene05439:CDS |
| AGTTATATAGACAAATTGGT+TGG | 0.539117 | 6.1:-73448178 | MS.gene05439:CDS |
| GTGAACTCTATGTCCCCAAT+TGG | 0.542652 | 6.1:+73450417 | None:intergenic |
| TTGAATGAGAGTTGTAAGGT+TGG | 0.548181 | 6.1:+73452557 | None:intergenic |
| CACCACAAAATGATGGCTAA+GGG | 0.548210 | 6.1:-73449107 | MS.gene05439:CDS |
| ACTCTAGCTGGATAAAGTGC+AGG | 0.550813 | 6.1:-73450389 | MS.gene05439:CDS |
| GATAAAGTGCAGGAAGTTCA+GGG | 0.551185 | 6.1:-73450379 | MS.gene05439:CDS |
| TTCACAGGGTCACAATCAGA+TGG | 0.555752 | 6.1:-73447300 | MS.gene05439:CDS |
| ACATCATCGCCAAGCATTGG+TGG | 0.557359 | 6.1:+73449167 | None:intergenic |
| TCCCTAGGGACAGAACTTGA+AGG | 0.561736 | 6.1:+73447267 | None:intergenic |
| TTCAGAAGAATGGTAAATTG+AGG | 0.561852 | 6.1:+73448414 | None:intergenic |
| ATACACAAAATGGAATGAGT+TGG | 0.570127 | 6.1:-73448149 | MS.gene05439:CDS |
| CACCTTCAAGTTCTGTCCCT+AGG | 0.570752 | 6.1:-73447269 | MS.gene05439:CDS |
| GTGAACCCATTAATGTCCCT+AGG | 0.571248 | 6.1:+73447252 | None:intergenic |
| CTAGAGAAGATAGGGAAAGA+TGG | 0.572158 | 6.1:-73449137 | MS.gene05439:CDS |
| TTCAATTCTCCAGAAAGTAA+TGG | 0.573973 | 6.1:+73450465 | None:intergenic |
| TGTGACCCTGTGAAGCCAAA+AGG | 0.578109 | 6.1:+73447309 | None:intergenic |
| AGGTGGAATTGCACCAATTG+GGG | 0.581694 | 6.1:-73450430 | MS.gene05439:CDS |
| TCACAGGGTCACAATCAGAT+GGG | 0.588057 | 6.1:-73447299 | MS.gene05439:CDS |
| AGTGCATACGAAGCAAAAGA+AGG | 0.588320 | 6.1:+73453678 | None:intergenic |
| TGTGGCGCCTAGAGAAGATA+GGG | 0.589096 | 6.1:-73449145 | MS.gene05439:CDS |
| AGCTTTCCACCACAAAATGA+TGG | 0.589747 | 6.1:-73449114 | MS.gene05439:CDS |
| CAATGCTTGGCGATGATGTG+TGG | 0.590954 | 6.1:-73449163 | MS.gene05439:CDS |
| GTTGCAGTTAAGGTGAGTCA+TGG | 0.593037 | 6.1:-73450357 | MS.gene05439:CDS |
| ATTCAATAAATACATAGTGA+AGG | 0.602832 | 6.1:-73450505 | MS.gene05439:CDS |
| TGAACCCATTAATGTCCCTA+GGG | 0.602842 | 6.1:+73447253 | None:intergenic |
| CATACCTGTGAAAATTGGGA+GGG | 0.602874 | 6.1:+73452523 | None:intergenic |
| TCATACCTGTGAAAATTGGG+AGG | 0.603052 | 6.1:+73452522 | None:intergenic |
| GAATTGAACCTTACTATGAG+AGG | 0.607156 | 6.1:-73450450 | MS.gene05439:CDS |
| GAATGGTAAATTGAGGTCCA+CGG | 0.610553 | 6.1:+73448421 | None:intergenic |
| TTGAACCTTACTATGAGAGG+TGG | 0.618381 | 6.1:-73450447 | MS.gene05439:CDS |
| GCATGCAATGACTTGTGACA+TGG | 0.626229 | 6.1:-73448463 | MS.gene05439:CDS |
| AGTAGAATACTCGACGCTGA+AGG | 0.629771 | 6.1:-73450672 | MS.gene05439:CDS |
| ATTTGGTTAGGTGAGTGAAG+AGG | 0.632675 | 6.1:-73452663 | MS.gene05439:intron |
| ACATAGTGAAGGAAAGAACT+GGG | 0.634050 | 6.1:-73450494 | MS.gene05439:CDS |
| ATTAAGAATCCAAGCACCAA+GGG | 0.638386 | 6.1:-73452588 | MS.gene05439:CDS |
| CAGTTAATGTGCAAAACATG+CGG | 0.638840 | 6.1:-73453499 | MS.gene05439:CDS |
| CATTAAGAATCCAAGCACCA+AGG | 0.647255 | 6.1:-73452589 | MS.gene05439:CDS |
| TACAAATGGCTAGCAGTGAG+TGG | 0.650899 | 6.1:-73447377 | MS.gene05439:CDS |
| GGGACATTAATGGGTTCACA+AGG | 0.658302 | 6.1:-73447248 | MS.gene05439:CDS |
| ACCACAAAATGATGGCTAAG+GGG | 0.658660 | 6.1:-73449106 | MS.gene05439:CDS |
| AGCAAGATCTATAGGTACCG+TGG | 0.658732 | 6.1:-73448438 | MS.gene05439:CDS |
| CAAGGTGTTAGGATTCAGGA+AGG | 0.661018 | 6.1:-73450327 | MS.gene05439:CDS |
| GGTGACCTATTGATGGAAGG+TGG | 0.664907 | 6.1:+73452614 | None:intergenic |
| TGATACTCCAAAGCTAAGAG+AGG | 0.665341 | 6.1:-73449045 | MS.gene05439:intron |
| CATGCAATGACTTGTGACAT+GGG | 0.667953 | 6.1:-73448462 | MS.gene05439:CDS |
| GAAGGTGACCTATTGATGGA+AGG | 0.674542 | 6.1:+73452611 | None:intergenic |
| CACAGGGTCACAATCAGATG+GGG | 0.676341 | 6.1:-73447298 | MS.gene05439:CDS |
| TGGGGATGTCTGATAGAATG+TGG | 0.679640 | 6.1:-73448500 | MS.gene05439:CDS |
| TTTGTTGTTAAGGATCATCG+TGG | 0.682651 | 6.1:-73450291 | MS.gene05439:CDS |
| GATTCAGGAAGGCATGACTG+AGG | 0.698697 | 6.1:-73450316 | MS.gene05439:CDS |
| AATTATAGGTGATCAAACTG+TGG | 0.703154 | 6.1:-73447511 | MS.gene05439:intron |
| ATGCAATGACTTGTGACATG+GGG | 0.729736 | 6.1:-73448461 | MS.gene05439:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTAGCATAAAAAT+AGG | + | chr6.1:73452036-73452055 | None:intergenic | 10.0% |
| !! | AATCTAATATATTTAACTAA+AGG | + | chr6.1:73452408-73452427 | None:intergenic | 10.0% |
| !! | ATAAACTTAAATTACTAAAA+AGG | + | chr6.1:73449815-73449834 | None:intergenic | 10.0% |
| !! | CATCTTATTAATATATTTAA+AGG | + | chr6.1:73450904-73450923 | None:intergenic | 10.0% |
| !! | CTTTAAATATATTAATAAGA+TGG | - | chr6.1:73450902-73450921 | MS.gene05439:intron | 10.0% |
| !! | TACAAATTATAATACAATTA+AGG | + | chr6.1:73449571-73449590 | None:intergenic | 10.0% |
| !! | TCTATTTAAGAAAAAAAAAT+TGG | + | chr6.1:73448707-73448726 | None:intergenic | 10.0% |
| !! | TGATATTATCTTAAAATTTA+AGG | - | chr6.1:73447858-73447877 | MS.gene05439:intron | 10.0% |
| !! | TTTAATATGAACTTAATTAT+AGG | - | chr6.1:73453473-73453492 | MS.gene05439:CDS | 10.0% |
| !!! | AATTTGTACTTTTAATTAAA+GGG | - | chr6.1:73449583-73449602 | MS.gene05439:intron | 10.0% |
| !!! | AGGTATATATTTTTATAATT+AGG | - | chr6.1:73451973-73451992 | MS.gene05439:intron | 10.0% |
| !!! | GGTATATATTTTTATAATTA+GGG | - | chr6.1:73451974-73451993 | MS.gene05439:intron | 10.0% |
| !!! | GTATATATTTTTATAATTAG+GGG | - | chr6.1:73451975-73451994 | MS.gene05439:intron | 10.0% |
| !!! | TAATTTGTACTTTTAATTAA+AGG | - | chr6.1:73449582-73449601 | MS.gene05439:intron | 10.0% |
| !!! | TTTTTTATTAAAAATGGTAA+AGG | + | chr6.1:73447950-73447969 | None:intergenic | 10.0% |
| !! | ACTTTATTATATGATTCATT+TGG | - | chr6.1:73448318-73448337 | MS.gene05439:intron | 15.0% |
| !! | CTTAAAAATTCATATGAAAA+TGG | + | chr6.1:73449347-73449366 | None:intergenic | 15.0% |
| !! | TTAATGATTTATACATGTAA+AGG | - | chr6.1:73451051-73451070 | MS.gene05439:intron | 15.0% |
| !! | TTAATTAAAGCTAATATCAA+TGG | - | chr6.1:73452620-73452639 | MS.gene05439:CDS | 15.0% |
| !! | TTATATTTAGTATTTACAGA+AGG | - | chr6.1:73451574-73451593 | MS.gene05439:intron | 15.0% |
| !! | TTGAAATGAAAAAAAGATAA+AGG | - | chr6.1:73449496-73449515 | MS.gene05439:intron | 15.0% |
| !! | TTGAAATGAAAAAAAGATAA+AGG | + | chr6.1:73449515-73449496 | None:intergenic | 15.0% |
| !! | TTTACATGTATAAATCATTA+AGG | + | chr6.1:73451052-73451071 | None:intergenic | 15.0% |
| !!! | AATTTTAAGGTTGTTTAATA+TGG | + | chr6.1:73448052-73448071 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTTCATTTCAATT+TGG | + | chr6.1:73449330-73449311 | None:intergenic | 15.0% |
| !!! | GGTATAATTTTTTTTTTTTG+AGG | + | chr6.1:73448829-73448848 | None:intergenic | 15.0% |
| !!! | TAATATGATTCTCTAAAAAA+TGG | - | chr6.1:73447887-73447906 | MS.gene05439:intron | 15.0% |
| !!! | TATTTTCTTAAAAATGGTAA+AGG | + | chr6.1:73447925-73447944 | None:intergenic | 15.0% |
| !!! | TTCATGATTTTATTTTCTTA+TGG | - | chr6.1:73449374-73449393 | MS.gene05439:intron | 15.0% |
| !!! | TTTTGAGATACTTAATAAAA+TGG | + | chr6.1:73453398-73453417 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTAAATAGAGA+AGG | - | chr6.1:73448709-73448728 | MS.gene05439:intron | 15.0% |
| !! | AAAAAAAAAATTATACCCAG+TGG | - | chr6.1:73448832-73448851 | MS.gene05439:intron | 20.0% |
| !! | AACATTTGTCTTTGTATAAT+AGG | - | chr6.1:73451195-73451214 | MS.gene05439:intron | 20.0% |
| !! | AATATAGCTTATGAAAATTG+AGG | - | chr6.1:73447774-73447793 | MS.gene05439:intron | 20.0% |
| !! | ACATTTGTCTTTGTATAATA+GGG | - | chr6.1:73451196-73451215 | MS.gene05439:intron | 20.0% |
| !! | ACCAATTAAAATGAAATTAG+AGG | + | chr6.1:73452776-73452795 | None:intergenic | 20.0% |
| !! | ATAAACAATATTTACACACA+GGG | + | chr6.1:73451558-73451577 | None:intergenic | 20.0% |
| !! | ATAAATTCGGTAATCAAATT+TGG | + | chr6.1:73450214-73450233 | None:intergenic | 20.0% |
| !! | ATACAGATATATTGTTTGTT+GGG | + | chr6.1:73447726-73447745 | None:intergenic | 20.0% |
| !! | ATATAGCTTATGAAAATTGA+GGG | - | chr6.1:73447775-73447794 | MS.gene05439:intron | 20.0% |
| !! | ATGATTAATTGAAAATACCT+TGG | + | chr6.1:73452918-73452937 | None:intergenic | 20.0% |
| !! | ATTATATGATTCATTTGGTT+AGG | - | chr6.1:73448323-73448342 | MS.gene05439:intron | 20.0% |
| !! | ATTCAATAAATACATAGTGA+AGG | - | chr6.1:73450493-73450512 | MS.gene05439:CDS | 20.0% |
| !! | ATTTAACATATTGGTCATAT+CGG | + | chr6.1:73453237-73453256 | None:intergenic | 20.0% |
| !! | GTTACCTAAAATAAAGTTAA+GGG | + | chr6.1:73449278-73449297 | None:intergenic | 20.0% |
| !! | TACATGTAAAGGAATTTAAA+AGG | - | chr6.1:73451062-73451081 | MS.gene05439:intron | 20.0% |
| !! | TAGCATGATATATTATTGAT+TGG | - | chr6.1:73450809-73450828 | MS.gene05439:intron | 20.0% |
| !! | TATAAACAATATTTACACAC+AGG | + | chr6.1:73451559-73451578 | None:intergenic | 20.0% |
| !! | TATACAGATATATTGTTTGT+TGG | + | chr6.1:73447727-73447746 | None:intergenic | 20.0% |
| !! | TATATTGTACCTTATTCATT+TGG | + | chr6.1:73452676-73452695 | None:intergenic | 20.0% |
| !! | TATCATCAGAATCAATATTA+TGG | - | chr6.1:73453551-73453570 | MS.gene05439:intron | 20.0% |
| !! | TGATTAATTGAAAATACCTT+GGG | + | chr6.1:73452917-73452936 | None:intergenic | 20.0% |
| !! | TGTTACCTAAAATAAAGTTA+AGG | + | chr6.1:73449279-73449298 | None:intergenic | 20.0% |
| !! | TTAAGAAAAAAAAATTGGCT+CGG | + | chr6.1:73448702-73448721 | None:intergenic | 20.0% |
| !! | TTATTCTATATGCTAGATAT+TGG | - | chr6.1:73452749-73452768 | MS.gene05439:intron | 20.0% |
| !! | TTATTTACATTTACCTAAGT+AGG | + | chr6.1:73449208-73449227 | None:intergenic | 20.0% |
| !!! | AAAAGTCTTTTAGTTCTATT+AGG | - | chr6.1:73452079-73452098 | MS.gene05439:intron | 20.0% |
| !!! | AAGAATATGTTTCCATTTTT+GGG | - | chr6.1:73449724-73449743 | MS.gene05439:intron | 20.0% |
| !!! | AAGGTCTATTTTCTTAAAAA+TGG | + | chr6.1:73447931-73447950 | None:intergenic | 20.0% |
| !!! | ATACATATTTGAAGTTAATG+TGG | - | chr6.1:73447644-73447663 | MS.gene05439:intron | 20.0% |
| !!! | ATAGTCTTGTAAATATCAAA+AGG | - | chr6.1:73449922-73449941 | MS.gene05439:intron | 20.0% |
| !!! | ATTTATCTGAAATCAGATTT+TGG | - | chr6.1:73452472-73452491 | MS.gene05439:intron | 20.0% |
| !!! | CAAGACTCAAATAAATTTTA+AGG | + | chr6.1:73448065-73448084 | None:intergenic | 20.0% |
| !!! | CTTTATTTTAGGTAACAATT+TGG | - | chr6.1:73449282-73449301 | MS.gene05439:intron | 20.0% |
| !!! | GCTTTAATTAATTTGCATAT+TGG | + | chr6.1:73452611-73452630 | None:intergenic | 20.0% |
| !!! | GTTCATTAACATTTGTTTTT+AGG | - | chr6.1:73451163-73451182 | MS.gene05439:intron | 20.0% |
| !!! | TAACTCTGAAAATTTAGAAA+TGG | + | chr6.1:73452805-73452824 | None:intergenic | 20.0% |
| !!! | TAAGAATATGTTTCCATTTT+TGG | - | chr6.1:73449723-73449742 | MS.gene05439:intron | 20.0% |
| !!! | TAAGTTTAAGTTCATATTTG+CGG | + | chr6.1:73452210-73452229 | None:intergenic | 20.0% |
| !!! | TAGTCTTGTAAATATCAAAA+GGG | - | chr6.1:73449923-73449942 | MS.gene05439:intron | 20.0% |
| !!! | TATGAAACATGCTTTTAAAT+AGG | - | chr6.1:73450020-73450039 | MS.gene05439:intron | 20.0% |
| !!! | TCCTCTAATTTCATTTTAAT+TGG | - | chr6.1:73452772-73452791 | MS.gene05439:intron | 20.0% |
| !!! | TGTACAAAAATATTGTTGTT+AGG | - | chr6.1:73447813-73447832 | MS.gene05439:intron | 20.0% |
| !!! | TGTAGTATTATTTTACTTTG+TGG | - | chr6.1:73452725-73452744 | MS.gene05439:intron | 20.0% |
| !!! | TTTATCTGAAATCAGATTTT+GGG | - | chr6.1:73452473-73452492 | MS.gene05439:intron | 20.0% |
| ! | AATTGGAGATTTCATATTGA+CGG | + | chr6.1:73448143-73448162 | None:intergenic | 25.0% |
| ! | ACATTAATCTATTAGTTCGT+TGG | - | chr6.1:73449955-73449974 | MS.gene05439:intron | 25.0% |
| ! | AGTATACTATCCTTCAATAA+AGG | - | chr6.1:73448868-73448887 | MS.gene05439:intron | 25.0% |
| ! | AGTTATATAGACAAATTGGT+TGG | - | chr6.1:73452820-73452839 | MS.gene05439:intron | 25.0% |
| ! | ATCAAATATTTACAGTCATG+TGG | + | chr6.1:73447842-73447861 | None:intergenic | 25.0% |
| ! | CAGTAAAATAGTTGAATTCT+AGG | + | chr6.1:73451410-73451429 | None:intergenic | 25.0% |
| ! | CTGAAAATTTAGAAATGGTA+TGG | + | chr6.1:73452800-73452819 | None:intergenic | 25.0% |
| ! | GTATACTATCCTTCAATAAA+GGG | - | chr6.1:73448869-73448888 | MS.gene05439:intron | 25.0% |
| ! | GTATATGAGAATAGACAAAA+AGG | - | chr6.1:73449467-73449486 | MS.gene05439:intron | 25.0% |
| ! | GTCATCTCTTAATTCTTATT+AGG | + | chr6.1:73447704-73447723 | None:intergenic | 25.0% |
| ! | GTTACCTGAAATTAAGTTAA+GGG | - | chr6.1:73449527-73449546 | MS.gene05439:intron | 25.0% |
| ! | GTTAGTTAAGGAATTTAAGT+AGG | - | chr6.1:73451011-73451030 | MS.gene05439:intron | 25.0% |
| ! | TAAAATCGTCAAGATTACAA+CGG | - | chr6.1:73451509-73451528 | MS.gene05439:intron | 25.0% |
| ! | TACTTATTTCCAACTAACTT+TGG | - | chr6.1:73450857-73450876 | MS.gene05439:intron | 25.0% |
| ! | TATACTATCCTTCAATAAAG+GGG | - | chr6.1:73448870-73448889 | MS.gene05439:intron | 25.0% |
| ! | TCAGAGTTATATAGACAAAT+TGG | - | chr6.1:73452816-73452835 | MS.gene05439:intron | 25.0% |
| ! | TCATATGAAAATGGATCAAA+AGG | + | chr6.1:73449338-73449357 | None:intergenic | 25.0% |
| ! | TCTATAGTACAACTAAAAGT+GGG | + | chr6.1:73450930-73450949 | None:intergenic | 25.0% |
| ! | TGTACTATAGACTATGAAAT+AGG | - | chr6.1:73450939-73450958 | MS.gene05439:intron | 25.0% |
| ! | TGTGCACAAATTTAACATAT+TGG | + | chr6.1:73453246-73453265 | None:intergenic | 25.0% |
| ! | TGTTACCTGAAATTAAGTTA+AGG | - | chr6.1:73449526-73449545 | MS.gene05439:intron | 25.0% |
| ! | TTAAAAAGACCAAAGTTAGT+TGG | + | chr6.1:73450869-73450888 | None:intergenic | 25.0% |
| ! | TTGTAACTCTAACTATCTAA+GGG | + | chr6.1:73448534-73448553 | None:intergenic | 25.0% |
| ! | TTTGTAACTCTAACTATCTA+AGG | + | chr6.1:73448535-73448554 | None:intergenic | 25.0% |
| !! | ACTTCAAATATGTATGCTTT+TGG | + | chr6.1:73447639-73447658 | None:intergenic | 25.0% |
| !! | ATAGGGTAAATGATTTTTGT+TGG | - | chr6.1:73451213-73451232 | MS.gene05439:intron | 25.0% |
| !! | CATTTTATAGCTGTTAGTTA+AGG | - | chr6.1:73450999-73451018 | MS.gene05439:intron | 25.0% |
| !! | CTAGCAATATTTTCTATAGA+TGG | + | chr6.1:73453581-73453600 | None:intergenic | 25.0% |
| !!! | ATACGTTTTGATTTTATCAC+TGG | - | chr6.1:73449077-73449096 | MS.gene05439:CDS | 25.0% |
| !!! | TAAGCCTTAAATATTTTGAC+AGG | - | chr6.1:73450121-73450140 | MS.gene05439:intron | 25.0% |
| !!! | TAGTCCCTTAACTTTATTTT+AGG | - | chr6.1:73449271-73449290 | MS.gene05439:intron | 25.0% |
| !!! | TCCTTTTTTTCCAAATTTTG+AGG | + | chr6.1:73451326-73451345 | None:intergenic | 25.0% |
| !!! | TTTAATTTTCCTCTTGCTTT+TGG | - | chr6.1:73448931-73448950 | MS.gene05439:intron | 25.0% |
| AAAAACCTCTTAATGCTATC+AGG | - | chr6.1:73449178-73449197 | MS.gene05439:CDS | 30.0% | |
| AAAATCGTCAAGATTACAAC+GGG | - | chr6.1:73451510-73451529 | MS.gene05439:intron | 30.0% | |
| AAACAAATTCATGTCAAGAG+TGG | - | chr6.1:73453297-73453316 | MS.gene05439:intron | 30.0% | |
| AAAGGAAATCCATTTGCATT+TGG | + | chr6.1:73453674-73453693 | None:intergenic | 30.0% | |
| AAATAACTACCGTATACATG+AGG | + | chr6.1:73448972-73448991 | None:intergenic | 30.0% | |
| AAGGTTGTTTAATATGGATC+CGG | + | chr6.1:73448046-73448065 | None:intergenic | 30.0% | |
| AATTATAGGTGATCAAACTG+TGG | - | chr6.1:73453487-73453506 | MS.gene05439:CDS | 30.0% | |
| AATTTAGTCGCTAACTGTTA+GGG | - | chr6.1:73448619-73448638 | MS.gene05439:intron | 30.0% | |
| ACTAAACTATAATTCCTGAC+AGG | + | chr6.1:73451695-73451714 | None:intergenic | 30.0% | |
| AGCCTATTTAACTAAAAAGC+AGG | - | chr6.1:73448746-73448765 | MS.gene05439:intron | 30.0% | |
| AGTTATTGAGTGTGTAAACA+GGG | - | chr6.1:73451244-73451263 | MS.gene05439:intron | 30.0% | |
| AGTTTCATACCTGTGAAAAT+TGG | + | chr6.1:73448483-73448502 | None:intergenic | 30.0% | |
| ATAAGATCATATACTCGTAC+TGG | - | chr6.1:73453024-73453043 | MS.gene05439:intron | 30.0% | |
| ATACACAAAATGGAATGAGT+TGG | - | chr6.1:73452849-73452868 | MS.gene05439:intron | 30.0% | |
| ATACTATCCTTCAATAAAGG+GGG | - | chr6.1:73448871-73448890 | MS.gene05439:intron | 30.0% | |
| ATATATACCTCTCTTAGCTT+TGG | + | chr6.1:73451963-73451982 | None:intergenic | 30.0% | |
| ATGCTAATAGCACATGTTAA+AGG | + | chr6.1:73452382-73452401 | None:intergenic | 30.0% | |
| ATGTATAGTAGTTTCTTGCA+TGG | + | chr6.1:73447399-73447418 | None:intergenic | 30.0% | |
| ATTGAAGGATAGTATACTAC+TGG | + | chr6.1:73448866-73448885 | None:intergenic | 30.0% | |
| CTAAAAAATAAGCCTATGAC+TGG | - | chr6.1:73450084-73450103 | MS.gene05439:intron | 30.0% | |
| CTATAGTACAACTAAAAGTG+GGG | + | chr6.1:73450929-73450948 | None:intergenic | 30.0% | |
| CTGTCCTGTCAAAATATTTA+AGG | + | chr6.1:73450128-73450147 | None:intergenic | 30.0% | |
| GCCTATTTAACTAAAAAGCA+GGG | - | chr6.1:73448747-73448766 | MS.gene05439:intron | 30.0% | |
| GCCTCAAAATTTGGAAAAAA+AGG | - | chr6.1:73451322-73451341 | MS.gene05439:intron | 30.0% | |
| GGAAAAAAAACTTGTACCTA+CGG | - | chr6.1:73451343-73451362 | MS.gene05439:intron | 30.0% | |
| GGAAAAATGACAATTAGTGA+CGG | + | chr6.1:73451376-73451395 | None:intergenic | 30.0% | |
| GTACTTGAACCAAATGAATA+AGG | - | chr6.1:73452664-73452683 | MS.gene05439:intron | 30.0% | |
| GTCTATAGTACAACTAAAAG+TGG | + | chr6.1:73450931-73450950 | None:intergenic | 30.0% | |
| GTTAATTATACATTGTCCGT+AGG | - | chr6.1:73451429-73451448 | MS.gene05439:intron | 30.0% | |
| GTTTCATACCTGTGAAAATT+GGG | + | chr6.1:73448482-73448501 | None:intergenic | 30.0% | |
| TAATTTAGTCGCTAACTGTT+AGG | - | chr6.1:73448618-73448637 | MS.gene05439:intron | 30.0% | |
| TACAACTCTCATTCAACAAA+AGG | - | chr6.1:73448448-73448467 | MS.gene05439:CDS | 30.0% | |
| TAGTCCCTTAACTTAATTTC+AGG | + | chr6.1:73449534-73449553 | None:intergenic | 30.0% | |
| TAGTTATTGAGTGTGTAAAC+AGG | - | chr6.1:73451243-73451262 | MS.gene05439:intron | 30.0% | |
| TGCACATGTTGAATTAGATT+TGG | + | chr6.1:73453275-73453294 | None:intergenic | 30.0% | |
| TTAATGCAAGCTTCATAGTT+AGG | + | chr6.1:73448212-73448231 | None:intergenic | 30.0% | |
| TTACATTTACCTAAGTAGGT+TGG | + | chr6.1:73449204-73449223 | None:intergenic | 30.0% | |
| TTAGCATAAAAATAGGCTCT+AGG | + | chr6.1:73452029-73452048 | None:intergenic | 30.0% | |
| TTCAATTCTCCAGAAAGTAA+TGG | + | chr6.1:73450536-73450555 | None:intergenic | 30.0% | |
| TTCAGAAGAATGGTAAATTG+AGG | + | chr6.1:73452587-73452606 | None:intergenic | 30.0% | |
| TTCTTATGCAAACATAGACA+AGG | + | chr6.1:73449424-73449443 | None:intergenic | 30.0% | |
| TTTGTTGAATGAGAGTTGTA+AGG | + | chr6.1:73448448-73448467 | None:intergenic | 30.0% | |
| ! | AACGACGAAGAGTATAAATT+CGG | + | chr6.1:73450227-73450246 | None:intergenic | 30.0% |
| ! | AGAATCATCAAAAACCCTTT+TGG | + | chr6.1:73447249-73447268 | None:intergenic | 30.0% |
| ! | CTTAATTTCAGGTAACAGTT+TGG | + | chr6.1:73449523-73449542 | None:intergenic | 30.0% |
| ! | CTTTTCTATCTCTAAACTTC+CGG | + | chr6.1:73448584-73448603 | None:intergenic | 30.0% |
| ! | TATTTTCATCTATGGGTGTA+CGG | - | chr6.1:73448987-73449006 | MS.gene05439:intron | 30.0% |
| !! | AATGCAAATGGATTTCCTTT+TGG | - | chr6.1:73453674-73453693 | MS.gene05439:intron | 30.0% |
| !! | ACGGTAGTTATTTTCATCTA+TGG | - | chr6.1:73448979-73448998 | MS.gene05439:intron | 30.0% |
| !! | CGGTAGTTATTTTCATCTAT+GGG | - | chr6.1:73448980-73448999 | MS.gene05439:intron | 30.0% |
| !! | CTTACCACTCTTTTAAGAAA+AGG | + | chr6.1:73447546-73447565 | None:intergenic | 30.0% |
| !! | GATGACTTAGTTTTTGAACT+CGG | - | chr6.1:73453140-73453159 | MS.gene05439:intron | 30.0% |
| !!! | ACTAATTGTCATTTTTCCGT+AGG | - | chr6.1:73451378-73451397 | MS.gene05439:intron | 30.0% |
| !!! | CAGTCATAGGCTTATTTTTT+AGG | + | chr6.1:73450086-73450105 | None:intergenic | 30.0% |
| AAATCGTCAAGATTACAACG+GGG | - | chr6.1:73451511-73451530 | MS.gene05439:intron | 35.0% | |
| AACTCTAACTATCTAAGGGT+TGG | + | chr6.1:73448530-73448549 | None:intergenic | 35.0% | |
| AAGATGGTCCAATGTTAAAC+CGG | - | chr6.1:73448024-73448043 | MS.gene05439:intron | 35.0% | |
| AATCCATGTATTCACGTAGT+TGG | - | chr6.1:73453089-73453108 | MS.gene05439:intron | 35.0% | |
| ACATAGTGAAGGAAAGAACT+GGG | - | chr6.1:73450504-73450523 | MS.gene05439:CDS | 35.0% | |
| ATATGGATCCGGTTTAACAT+TGG | + | chr6.1:73448035-73448054 | None:intergenic | 35.0% | |
| ATTAAGAATCCAAGCACCAA+GGG | - | chr6.1:73448410-73448429 | MS.gene05439:CDS | 35.0% | |
| ATTCTACTACCTGTGAAAGT+TGG | + | chr6.1:73450314-73450333 | None:intergenic | 35.0% | |
| ATTTAACTAAAAAGCAGGGC+CGG | - | chr6.1:73448751-73448770 | MS.gene05439:intron | 35.0% | |
| CACATGATGAAAATGAGAAC+TGG | - | chr6.1:73450459-73450478 | MS.gene05439:CDS | 35.0% | |
| CAGTTAATGTGCAAAACATG+CGG | - | chr6.1:73447499-73447518 | MS.gene05439:CDS | 35.0% | |
| CATGTTAAGCAACCCAAAAA+TGG | + | chr6.1:73449739-73449758 | None:intergenic | 35.0% | |
| CGGAAGTTTAGAGATAGAAA+AGG | - | chr6.1:73448582-73448601 | MS.gene05439:intron | 35.0% | |
| GAATTGAACCTTACTATGAG+AGG | - | chr6.1:73450548-73450567 | MS.gene05439:CDS | 35.0% | |
| GATTTCATTCGTTTGTCGTT+TGG | + | chr6.1:73447293-73447312 | None:intergenic | 35.0% | |
| GCATATTGGATTCAGAAGAA+TGG | + | chr6.1:73452597-73452616 | None:intergenic | 35.0% | |
| GCCAAGCAATAATGTACAAA+TGG | - | chr6.1:73453607-73453626 | MS.gene05439:intron | 35.0% | |
| GCCATTTGTACATTATTGCT+TGG | + | chr6.1:73453611-73453630 | None:intergenic | 35.0% | |
| GTTAGCGACTAAATTAGAGA+TGG | + | chr6.1:73448614-73448633 | None:intergenic | 35.0% | |
| GTTGAAACTTGAAATAGTGC+CGG | - | chr6.1:73448562-73448581 | MS.gene05439:intron | 35.0% | |
| TAATGAAGGTGACCTATTGA+TGG | + | chr6.1:73448394-73448413 | None:intergenic | 35.0% | |
| TACATAGTGAAGGAAAGAAC+TGG | - | chr6.1:73450503-73450522 | MS.gene05439:CDS | 35.0% | |
| TTGAATGAGAGTTGTAAGGT+TGG | + | chr6.1:73448444-73448463 | None:intergenic | 35.0% | |
| TTGTGGTATGAATAGCTATG+CGG | + | chr6.1:73448176-73448195 | None:intergenic | 35.0% | |
| ! | AACATTGCTTTGTTAACCCA+AGG | - | chr6.1:73452898-73452917 | MS.gene05439:intron | 35.0% |
| ! | AACTTGTTTCTCATGGGTTA+GGG | - | chr6.1:73447669-73447688 | MS.gene05439:intron | 35.0% |
| ! | AATGAGTTGGAGGAAATTGA+TGG | - | chr6.1:73452862-73452881 | MS.gene05439:intron | 35.0% |
| ! | ACACACATGACTTTTACCTA+CGG | + | chr6.1:73451448-73451467 | None:intergenic | 35.0% |
| ! | ATGCTTTTAAATAGGCTAGC+AGG | - | chr6.1:73450028-73450047 | MS.gene05439:intron | 35.0% |
| ! | ATGGAAGTAATCAAGGTGTT+AGG | - | chr6.1:73450660-73450679 | MS.gene05439:CDS | 35.0% |
| ! | CAAAACATGCGGAACTTTTT+AGG | - | chr6.1:73447510-73447529 | MS.gene05439:intron | 35.0% |
| ! | CAGTTCTCATTTTCATCATG+TGG | + | chr6.1:73450461-73450480 | None:intergenic | 35.0% |
| ! | CATATTGGTCATATCGGTTA+AGG | + | chr6.1:73453231-73453250 | None:intergenic | 35.0% |
| ! | GAATTCTAGGCTTTTACCTA+CGG | + | chr6.1:73451397-73451416 | None:intergenic | 35.0% |
| ! | GGAACCTTTTCTTAAAAGAG+TGG | - | chr6.1:73447539-73447558 | MS.gene05439:intron | 35.0% |
| ! | TAATCAAGGTGTTAGGATTC+AGG | - | chr6.1:73450667-73450686 | MS.gene05439:CDS | 35.0% |
| ! | TATAAGCATTTTTGCCTGTC+AGG | - | chr6.1:73451678-73451697 | MS.gene05439:intron | 35.0% |
| ! | TGAAATCAGATTTTGGGCAT+GGG | - | chr6.1:73452479-73452498 | MS.gene05439:intron | 35.0% |
| ! | TTGGAGAAGCATACACAAAA+TGG | - | chr6.1:73452839-73452858 | MS.gene05439:intron | 35.0% |
| ! | TTGTTGCGACACATTTTTGT+AGG | + | chr6.1:73451611-73451630 | None:intergenic | 35.0% |
| !! | AAAATAGGCTCTAGGAAATG+TGG | + | chr6.1:73452021-73452040 | None:intergenic | 35.0% |
| !! | AATCATTAACTTGTGCCTTG+AGG | + | chr6.1:73449625-73449644 | None:intergenic | 35.0% |
| !! | ACCACAATCTCTAGCTTTAT+AGG | + | chr6.1:73450422-73450441 | None:intergenic | 35.0% |
| !! | ATCATTAACTTGTGCCTTGA+GGG | + | chr6.1:73449624-73449643 | None:intergenic | 35.0% |
| !! | ATCTCTAGCTTTATAGGGTA+AGG | + | chr6.1:73450416-73450435 | None:intergenic | 35.0% |
| !! | CCACAATCTCTAGCTTTATA+GGG | + | chr6.1:73450421-73450440 | None:intergenic | 35.0% |
| !! | GAAGACTTGTTGGAACAATT+TGG | + | chr6.1:73450394-73450413 | None:intergenic | 35.0% |
| !! | GTGGTTAACTTGTTTCTCAT+GGG | - | chr6.1:73447663-73447682 | MS.gene05439:intron | 35.0% |
| !! | TAACTTGTTTCTCATGGGTT+AGG | - | chr6.1:73447668-73447687 | MS.gene05439:intron | 35.0% |
| !! | TGTGGTTAACTTGTTTCTCA+TGG | - | chr6.1:73447662-73447681 | MS.gene05439:intron | 35.0% |
| !! | TTTGTTGTTAAGGATCATCG+TGG | - | chr6.1:73450707-73450726 | MS.gene05439:intron | 35.0% |
| !!! | GCCCTGCTTTTTAGTTAAAT+AGG | + | chr6.1:73448751-73448770 | None:intergenic | 35.0% |
| !!! | TAGGTGAAGTTGGTTTTTTG+TGG | + | chr6.1:73448193-73448212 | None:intergenic | 35.0% |
| !!! | TATTTTGACAGGACAGACTT+AGG | - | chr6.1:73450132-73450151 | MS.gene05439:intron | 35.0% |
| AAACATCATCCACCAATGCT+TGG | - | chr6.1:73451822-73451841 | MS.gene05439:intron | 40.0% | |
| AACTCTACGATTAGTAAGGG+TGG | + | chr6.1:73450190-73450209 | None:intergenic | 40.0% | |
| AACTTCGTTCCAACTTTCAC+AGG | - | chr6.1:73450302-73450321 | MS.gene05439:CDS | 40.0% | |
| ACCACAAAATGATGGCTAAG+GGG | - | chr6.1:73451892-73451911 | MS.gene05439:intron | 40.0% | |
| ACCACAACACCAAATGCAAA+TGG | - | chr6.1:73453662-73453681 | MS.gene05439:intron | 40.0% | |
| ACTACTGGATAGTATACCAC+TGG | + | chr6.1:73448851-73448870 | None:intergenic | 40.0% | |
| ACTCTACGATTAGTAAGGGT+GGG | + | chr6.1:73450189-73450208 | None:intergenic | 40.0% | |
| ACTGTTGCTGGATGATTGTT+TGG | + | chr6.1:73453521-73453540 | None:intergenic | 40.0% | |
| AGCTTTCCACCACAAAATGA+TGG | - | chr6.1:73451884-73451903 | MS.gene05439:intron | 40.0% | |
| AGTAAGGGTGGGAATAGATT+AGG | + | chr6.1:73450178-73450197 | None:intergenic | 40.0% | |
| AGTGCATACGAAGCAAAAGA+AGG | + | chr6.1:73447323-73447342 | None:intergenic | 40.0% | |
| AGTTCACAGATAACTCTAGC+TGG | - | chr6.1:73450597-73450616 | MS.gene05439:CDS | 40.0% | |
| ATAGGGTAAGGAAGACTTGT+TGG | + | chr6.1:73450404-73450423 | None:intergenic | 40.0% | |
| ATGCCAACTACGTGAATACA+TGG | + | chr6.1:73453095-73453114 | None:intergenic | 40.0% | |
| ATGGGTGTACGGCATATATA+CGG | - | chr6.1:73448998-73449017 | MS.gene05439:intron | 40.0% | |
| ATTTGGTTAGGTGAGTGAAG+AGG | - | chr6.1:73448335-73448354 | MS.gene05439:CDS | 40.0% | |
| CAATTCCACCTCTCATAGTA+AGG | + | chr6.1:73450559-73450578 | None:intergenic | 40.0% | |
| CACCACAAAATGATGGCTAA+GGG | - | chr6.1:73451891-73451910 | MS.gene05439:intron | 40.0% | |
| CATACCTGTGAAAATTGGGA+GGG | + | chr6.1:73448478-73448497 | None:intergenic | 40.0% | |
| CATCAGACTTTCAAGAGATC+AGG | - | chr6.1:73450054-73450073 | MS.gene05439:intron | 40.0% | |
| CATCTTTCCCTATCTTCTCT+AGG | + | chr6.1:73451863-73451882 | None:intergenic | 40.0% | |
| CATTAAGAATCCAAGCACCA+AGG | - | chr6.1:73448409-73448428 | MS.gene05439:CDS | 40.0% | |
| CCAATACAACATGTCTTGTG+TGG | + | chr6.1:73453064-73453083 | None:intergenic | 40.0% | |
| CCACACAAGACATGTTGTAT+TGG | - | chr6.1:73453061-73453080 | MS.gene05439:intron | 40.0% | |
| CCCTATAAAGCTAGAGATTG+TGG | - | chr6.1:73450418-73450437 | MS.gene05439:CDS | 40.0% | |
| CTACTGGATAGTATACCACT+GGG | + | chr6.1:73448850-73448869 | None:intergenic | 40.0% | |
| CTAGAGAAGATAGGGAAAGA+TGG | - | chr6.1:73451861-73451880 | MS.gene05439:intron | 40.0% | |
| CTAGAGATTGTGGTACTTGA+TGG | - | chr6.1:73450428-73450447 | MS.gene05439:CDS | 40.0% | |
| CTTAAAGGGGCCTCAAAATT+TGG | - | chr6.1:73451313-73451332 | MS.gene05439:intron | 40.0% | |
| GAATGGTAAATTGAGGTCCA+CGG | + | chr6.1:73452580-73452599 | None:intergenic | 40.0% | |
| GATAAAGTGCAGGAAGTTCA+GGG | - | chr6.1:73450619-73450638 | MS.gene05439:CDS | 40.0% | |
| GCTTCATAGTTAGGTGAAGT+TGG | + | chr6.1:73448203-73448222 | None:intergenic | 40.0% | |
| GGCAACTCTACGATTAGTAA+GGG | + | chr6.1:73450193-73450212 | None:intergenic | 40.0% | |
| GGTGCTTGGATTCTTAATGA+AGG | + | chr6.1:73448408-73448427 | None:intergenic | 40.0% | |
| GTGAGTCATGGAAGTAATCA+AGG | - | chr6.1:73450653-73450672 | MS.gene05439:CDS | 40.0% | |
| TATGTCTCTATAGAGCGATC+TGG | + | chr6.1:73448656-73448675 | None:intergenic | 40.0% | |
| TATGTTGTTGCTACTGTTGC+TGG | + | chr6.1:73453533-73453552 | None:intergenic | 40.0% | |
| TCATACCTGTGAAAATTGGG+AGG | + | chr6.1:73448479-73448498 | None:intergenic | 40.0% | |
| TGAACCCATTAATGTCCCTA+GGG | + | chr6.1:73453748-73453767 | None:intergenic | 40.0% | |
| TGATACTCCAAAGCTAAGAG+AGG | - | chr6.1:73451953-73451972 | MS.gene05439:intron | 40.0% | |
| TGCATCTGTGTCAAATGTCA+TGG | + | chr6.1:73447584-73447603 | None:intergenic | 40.0% | |
| TGGCAACTCTACGATTAGTA+AGG | + | chr6.1:73450194-73450213 | None:intergenic | 40.0% | |
| TGTGTGTCTTGAGTAGTAGA+TGG | + | chr6.1:73452703-73452722 | None:intergenic | 40.0% | |
| TTGAACCTTACTATGAGAGG+TGG | - | chr6.1:73450551-73450570 | MS.gene05439:CDS | 40.0% | |
| TTGCTTAACATGTGCCCTAA+GGG | - | chr6.1:73449747-73449766 | MS.gene05439:intron | 40.0% | |
| TTGGAACGAAGTTATCTCAG+TGG | + | chr6.1:73450295-73450314 | None:intergenic | 40.0% | |
| ! | ATGCAATGACTTGTGACATG+GGG | - | chr6.1:73452537-73452556 | MS.gene05439:CDS | 40.0% |
| ! | CACAAAATGGAATGAGTTGG+AGG | - | chr6.1:73452852-73452871 | MS.gene05439:intron | 40.0% |
| ! | CATGCAATGACTTGTGACAT+GGG | - | chr6.1:73452536-73452555 | MS.gene05439:CDS | 40.0% |
| ! | CTGAAATCAGATTTTGGGCA+TGG | - | chr6.1:73452478-73452497 | MS.gene05439:intron | 40.0% |
| ! | GAAATCAGATTTTGGGCATG+GGG | - | chr6.1:73452480-73452499 | MS.gene05439:intron | 40.0% |
| ! | GATCATATACTCGTACTGGT+TGG | - | chr6.1:73453028-73453047 | MS.gene05439:intron | 40.0% |
| ! | TAAGGCTTAAGCATTGTCAG+CGG | + | chr6.1:73450110-73450129 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | - | chr6.1:73449607-73449626 | MS.gene05439:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr6.1:73449764-73449783 | None:intergenic | 40.0% |
| !! | GACTGAGGCATTTGTTGTTA+AGG | - | chr6.1:73450697-73450716 | MS.gene05439:intron | 40.0% |
| !! | GGCTTTTGATTGTTTTGTGC+AGG | - | chr6.1:73448908-73448927 | MS.gene05439:intron | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr6.1:73449765-73449784 | None:intergenic | 40.0% |
| !! | TCCATTTGCATTTGGTGTTG+TGG | + | chr6.1:73453666-73453685 | None:intergenic | 40.0% |
| !! | TGCATTTGGTGTTGTGGTAT+AGG | + | chr6.1:73453660-73453679 | None:intergenic | 40.0% |
| !!! | GATTTCCTTTTGGCTTCACA+GGG | - | chr6.1:73453684-73453703 | MS.gene05439:intron | 40.0% |
| ACAGGGCCTCAAACTTAAAG+GGG | - | chr6.1:73451300-73451319 | MS.gene05439:intron | 45.0% | |
| ACATGGGGAGCAAGATCTAT+AGG | - | chr6.1:73452552-73452571 | MS.gene05439:CDS | 45.0% | |
| ACTCTAGCTGGATAAAGTGC+AGG | - | chr6.1:73450609-73450628 | MS.gene05439:CDS | 45.0% | |
| AGAGGTGGAATTGCACCAAT+TGG | - | chr6.1:73450566-73450585 | MS.gene05439:CDS | 45.0% | |
| AGGTCGAGTTAGACTTTGCA+AGG | + | chr6.1:73450158-73450177 | None:intergenic | 45.0% | |
| AGGTGGAATTGCACCAATTG+GGG | - | chr6.1:73450568-73450587 | MS.gene05439:CDS | 45.0% | |
| AGTAGAATACTCGACGCTGA+AGG | - | chr6.1:73450326-73450345 | MS.gene05439:CDS | 45.0% | |
| AGTCGCTAACTGTTAGGGAT+GGG | - | chr6.1:73448624-73448643 | MS.gene05439:intron | 45.0% | |
| ATTGAGTGTGTAAACAGGGC+CGG | - | chr6.1:73451248-73451267 | MS.gene05439:intron | 45.0% | |
| CACAGGGCCTCAAACTTAAA+GGG | - | chr6.1:73451299-73451318 | MS.gene05439:intron | 45.0% | |
| CCACCACAAAATGATGGCTA+AGG | - | chr6.1:73451890-73451909 | MS.gene05439:intron | 45.0% | |
| CTGTCCCTAGGGACATTAAT+GGG | - | chr6.1:73453741-73453760 | MS.gene05439:CDS | 45.0% | |
| GAAGAGGTGGATAGAGCAAT+TGG | - | chr6.1:73448351-73448370 | MS.gene05439:CDS | 45.0% | |
| GAAGGTGACCTATTGATGGA+AGG | + | chr6.1:73448390-73448409 | None:intergenic | 45.0% | |
| GAAGTTCAGGGTTGCAGTTA+AGG | - | chr6.1:73450631-73450650 | MS.gene05439:CDS | 45.0% | |
| GAGGTGGAATTGCACCAATT+GGG | - | chr6.1:73450567-73450586 | MS.gene05439:CDS | 45.0% | |
| GCTTTCCACCTTCCATCAAT+AGG | - | chr6.1:73448379-73448398 | MS.gene05439:CDS | 45.0% | |
| GGATAAAGTGCAGGAAGTTC+AGG | - | chr6.1:73450618-73450637 | MS.gene05439:CDS | 45.0% | |
| GGGAAGAGACCATTACTTTC+TGG | - | chr6.1:73450524-73450543 | MS.gene05439:CDS | 45.0% | |
| GTGAACCCATTAATGTCCCT+AGG | + | chr6.1:73453749-73453768 | None:intergenic | 45.0% | |
| GTGAACTCTATGTCCCCAAT+TGG | + | chr6.1:73450584-73450603 | None:intergenic | 45.0% | |
| GTGGGGATTCCTCATGTATA+CGG | - | chr6.1:73448960-73448979 | MS.gene05439:intron | 45.0% | |
| GTTGCAGTTAAGGTGAGTCA+TGG | - | chr6.1:73450641-73450660 | MS.gene05439:CDS | 45.0% | |
| GTTGCTTAACATGTGCCCTA+AGG | - | chr6.1:73449746-73449765 | MS.gene05439:intron | 45.0% | |
| GTTTGCACCCCCTTTATTGA+AGG | + | chr6.1:73448881-73448900 | None:intergenic | 45.0% | |
| TACAAATGGCTAGCAGTGAG+TGG | - | chr6.1:73453621-73453640 | MS.gene05439:intron | 45.0% | |
| TAGTCGCTAACTGTTAGGGA+TGG | - | chr6.1:73448623-73448642 | MS.gene05439:intron | 45.0% | |
| TATGCGGAGACTACTGCAAT+TGG | + | chr6.1:73448160-73448179 | None:intergenic | 45.0% | |
| TCACAGGGTCACAATCAGAT+GGG | - | chr6.1:73453699-73453718 | MS.gene05439:CDS | 45.0% | |
| TCTGTCCCTAGGGACATTAA+TGG | - | chr6.1:73453740-73453759 | MS.gene05439:CDS | 45.0% | |
| TGGGGATGTCTGATAGAATG+TGG | - | chr6.1:73452498-73452517 | MS.gene05439:intron | 45.0% | |
| TGGGTTCACAAGGCAACTTT+AGG | - | chr6.1:73453760-73453779 | MS.gene05439:CDS | 45.0% | |
| TTCACAGGGTCACAATCAGA+TGG | - | chr6.1:73453698-73453717 | MS.gene05439:CDS | 45.0% | |
| ! | AAGGTTGGTTGTTGATCCCT+TGG | + | chr6.1:73448429-73448448 | None:intergenic | 45.0% |
| ! | ACCTTCAAGTTCTGTCCCTA+GGG | - | chr6.1:73453730-73453749 | MS.gene05439:CDS | 45.0% |
| ! | AGCAAGATCTATAGGTACCG+TGG | - | chr6.1:73452560-73452579 | MS.gene05439:CDS | 45.0% |
| ! | CAAGGTGTTAGGATTCAGGA+AGG | - | chr6.1:73450671-73450690 | MS.gene05439:CDS | 45.0% |
| ! | CCTTAGCCATCATTTTGTGG+TGG | + | chr6.1:73451893-73451912 | None:intergenic | 45.0% |
| ! | CTTTCCCTCCCAATTTTCAC+AGG | - | chr6.1:73448471-73448490 | MS.gene05439:CDS | 45.0% |
| ! | GCATGCAATGACTTGTGACA+TGG | - | chr6.1:73452535-73452554 | MS.gene05439:CDS | 45.0% |
| ! | GTCATGTGTGTCACTCTAAG+TGG | - | chr6.1:73451457-73451476 | MS.gene05439:intron | 45.0% |
| ! | GTTGGCCTGATAGCATTAAG+AGG | + | chr6.1:73449186-73449205 | None:intergenic | 45.0% |
| ! | TCCCCTTAGCCATCATTTTG+TGG | + | chr6.1:73451896-73451915 | None:intergenic | 45.0% |
| ! | TTGAGGCCCCTTTAAGTTTG+AGG | + | chr6.1:73451309-73451328 | None:intergenic | 45.0% |
| !! | GCGGAACTTTTTAGGAGCTT+TGG | - | chr6.1:73447518-73447537 | MS.gene05439:intron | 45.0% |
| !! | GGGACATTAATGGGTTCACA+AGG | - | chr6.1:73453750-73453769 | MS.gene05439:CDS | 45.0% |
| !! | GTGACCTTGCCTTTTTAGCA+GGG | + | chr6.1:73449148-73449167 | None:intergenic | 45.0% |
| !! | GTTTCTCATGGGTTAGGGTT+GGG | - | chr6.1:73447674-73447693 | MS.gene05439:intron | 45.0% |
| !! | TCTTGCTTTTGGCGTTAGGT+GGG | - | chr6.1:73448942-73448961 | MS.gene05439:intron | 45.0% |
| !! | TGTGACCTTGCCTTTTTAGC+AGG | + | chr6.1:73449149-73449168 | None:intergenic | 45.0% |
| !! | TGTTTCTCATGGGTTAGGGT+TGG | - | chr6.1:73447673-73447692 | MS.gene05439:intron | 45.0% |
| !! | TTCCTCTTGCTTTTGGCGTT+AGG | - | chr6.1:73448938-73448957 | MS.gene05439:intron | 45.0% |
| !! | TTTCTCATGGGTTAGGGTTG+GGG | - | chr6.1:73447675-73447694 | MS.gene05439:intron | 45.0% |
| !!! | GGATTTCCTTTTGGCTTCAC+AGG | - | chr6.1:73453683-73453702 | MS.gene05439:intron | 45.0% |
| !!! | TAGTGACGGATTTTGTCCGT+AGG | + | chr6.1:73451362-73451381 | None:intergenic | 45.0% |
| !!! | TTTTTGAGGCCCATCCTTGA+GGG | + | chr6.1:73448815-73448834 | None:intergenic | 45.0% |
| !!! | TTTTTTGAGGCCCATCCTTG+AGG | + | chr6.1:73448816-73448835 | None:intergenic | 45.0% |
| !! | ATAAATTTACAATTTAATTA+AGG | + | chr6.1:73449789-73449808 | None:intergenic | 5.0% |
| !! | TAAATTTACAATTTAATTAA+GGG | + | chr6.1:73449788-73449807 | None:intergenic | 5.0% |
| !!! | ATATTTTATTAAAAATAAGA+TGG | - | chr6.1:73448008-73448027 | MS.gene05439:intron | 5.0% |
| !!! | ATTCATTTTTTTATTAAAAA+TGG | + | chr6.1:73447956-73447975 | None:intergenic | 5.0% |
| CAATGCTTGGCGATGATGTG+TGG | - | chr6.1:73451835-73451854 | MS.gene05439:intron | 50.0% | |
| CACACATCATCGCCAAGCAT+TGG | + | chr6.1:73451837-73451856 | None:intergenic | 50.0% | |
| CACAGGGTCACAATCAGATG+GGG | - | chr6.1:73453700-73453719 | MS.gene05439:CDS | 50.0% | |
| CACCTAACGCCAAAAGCAAG+AGG | + | chr6.1:73448943-73448962 | None:intergenic | 50.0% | |
| GCACAGGGCCTCAAACTTAA+AGG | - | chr6.1:73451298-73451317 | MS.gene05439:intron | 50.0% | |
| GCTATCAGGCCAACCTACTT+AGG | - | chr6.1:73449192-73449211 | MS.gene05439:intron | 50.0% | |
| GGTGACCTATTGATGGAAGG+TGG | + | chr6.1:73448387-73448406 | None:intergenic | 50.0% | |
| TCCCTAGGGACAGAACTTGA+AGG | + | chr6.1:73453734-73453753 | None:intergenic | 50.0% | |
| TGGTTAGGTGAGTGAAGAGG+TGG | - | chr6.1:73448338-73448357 | MS.gene05439:CDS | 50.0% | |
| TGTGACCCTGTGAAGCCAAA+AGG | + | chr6.1:73453692-73453711 | None:intergenic | 50.0% | |
| TGTGGCGCCTAGAGAAGATA+GGG | - | chr6.1:73451853-73451872 | MS.gene05439:intron | 50.0% | |
| TTGAAGCTCTTGCACAGAGC+CGG | + | chr6.1:73451270-73451289 | None:intergenic | 50.0% | |
| ! | CACCTTCAAGTTCTGTCCCT+AGG | - | chr6.1:73453729-73453748 | MS.gene05439:CDS | 50.0% |
| ! | GATTCAGGAAGGCATGACTG+AGG | - | chr6.1:73450682-73450701 | MS.gene05439:intron | 50.0% |
| !! | ACATCATCGCCAAGCATTGG+TGG | + | chr6.1:73451834-73451853 | None:intergenic | 50.0% |
| !! | CTCTTGCTTTTGGCGTTAGG+TGG | - | chr6.1:73448941-73448960 | MS.gene05439:intron | 50.0% |
| !! | CTTGCTTTTGGCGTTAGGTG+GGG | - | chr6.1:73448943-73448962 | MS.gene05439:intron | 50.0% |
| !! | GTTGTTGATCCCTTGGTGCT+TGG | + | chr6.1:73448422-73448441 | None:intergenic | 50.0% |
| !! | TCGGCTCTGGGAATGAAAAG+AGG | + | chr6.1:73449103-73449122 | None:intergenic | 50.0% |
| AAAAAGCAGGGCCGGCCTTA+AGG | - | chr6.1:73448759-73448778 | MS.gene05439:intron | 55.0% | |
| AAAAGCAGGGCCGGCCTTAA+GGG | - | chr6.1:73448760-73448779 | MS.gene05439:intron | 55.0% | |
| ACGGCCCTGCTAAAAAGGCA+AGG | - | chr6.1:73449141-73449160 | MS.gene05439:CDS | 55.0% | |
| AGCCACCGAATTCTCAGGGA+CGG | - | chr6.1:73449122-73449141 | MS.gene05439:CDS | 55.0% | |
| CATTGTCAGCGGCCAGTCAT+AGG | + | chr6.1:73450099-73450118 | None:intergenic | 55.0% | |
| GAGCTGTTTGCACCCCCTTA+AGG | + | chr6.1:73448777-73448796 | None:intergenic | 55.0% | |
| GCAAACAGCTCAACCGAGCT+GGG | - | chr6.1:73448786-73448805 | MS.gene05439:intron | 55.0% | |
| GGCTCTGTGCAAGAGCTTCA+AGG | - | chr6.1:73451269-73451288 | MS.gene05439:intron | 55.0% | |
| GTGTGGCGCCTAGAGAAGAT+AGG | - | chr6.1:73451852-73451871 | MS.gene05439:intron | 55.0% | |
| TGCAAACAGCTCAACCGAGC+TGG | - | chr6.1:73448785-73448804 | MS.gene05439:intron | 55.0% | |
| TGTTTGCACCCCCTTAAGGC+CGG | + | chr6.1:73448773-73448792 | None:intergenic | 55.0% | |
| ! | AAGTTTGAGGCCCTGTGCCA+CGG | + | chr6.1:73451296-73451315 | None:intergenic | 55.0% |
| ! | TCCCTGAGAATTCGGTGGCT+CGG | + | chr6.1:73449122-73449141 | None:intergenic | 55.0% |
| !! | TGGCTCGGTCTGTCTGTCAT+AGG | + | chr6.1:73448687-73448706 | None:intergenic | 55.0% |
| AAAGCAGGGCCGGCCTTAAG+GGG | - | chr6.1:73448761-73448780 | MS.gene05439:intron | 60.0% | |
| AGCCGAGCCACCGAATTCTC+AGG | - | chr6.1:73449117-73449136 | MS.gene05439:CDS | 60.0% | |
| CAGGGACGGCCCTGCTAAAA+AGG | - | chr6.1:73449136-73449155 | MS.gene05439:CDS | 60.0% | |
| CAGGGCCGTCCCTGAGAATT+CGG | + | chr6.1:73449130-73449149 | None:intergenic | 60.0% | |
| GCCGAGCCACCGAATTCTCA+GGG | - | chr6.1:73449118-73449137 | MS.gene05439:CDS | 60.0% | |
| TGCAAGAGCTTCAAGGCCCG+TGG | - | chr6.1:73451276-73451295 | MS.gene05439:intron | 60.0% | |
| TTGAGGCCCATCCTTGAGGG+AGG | + | chr6.1:73448812-73448831 | None:intergenic | 60.0% | |
| ! | AAGGGGGTGCAAACAGCGCA+TGG | - | chr6.1:73448887-73448906 | MS.gene05439:intron | 60.0% |
| ! | AGAATTCGGTGGCTCGGCTC+TGG | + | chr6.1:73449116-73449135 | None:intergenic | 60.0% |
| ! | AGTTTGAGGCCCTGTGCCAC+GGG | + | chr6.1:73451295-73451314 | None:intergenic | 60.0% |
| ! | GAATTCGGTGGCTCGGCTCT+GGG | + | chr6.1:73449115-73449134 | None:intergenic | 60.0% |
| !! | CTCATGGGTTAGGGTTGGGG+TGG | - | chr6.1:73447678-73447697 | MS.gene05439:intron | 60.0% |
| AAGCAGGGCCGGCCTTAAGG+GGG | - | chr6.1:73448762-73448781 | MS.gene05439:intron | 65.0% | |
| AGCTGGGCCTCCCTCAAGGA+TGG | - | chr6.1:73448802-73448821 | MS.gene05439:intron | 65.0% | |
| AGCTTCAAGGCCCGTGGCAC+AGG | - | chr6.1:73451282-73451301 | MS.gene05439:intron | 65.0% | |
| GCTGGGCCTCCCTCAAGGAT+GGG | - | chr6.1:73448803-73448822 | MS.gene05439:intron | 65.0% | |
| GCTTCAAGGCCCGTGGCACA+GGG | - | chr6.1:73451283-73451302 | MS.gene05439:intron | 65.0% | |
| GGCCGTCCCTGAGAATTCGG+TGG | + | chr6.1:73449127-73449146 | None:intergenic | 65.0% | |
| TCCTTGAGGGAGGCCCAGCT+CGG | + | chr6.1:73448802-73448821 | None:intergenic | 65.0% | |
| ACCGAGCTGGGCCTCCCTCA+AGG | - | chr6.1:73448798-73448817 | MS.gene05439:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 73447239 | 73453781 | 73447239 | ID=MS.gene05439 |
| chr6.1 | mRNA | 73447239 | 73453781 | 73447239 | ID=MS.gene05439.t1;Parent=MS.gene05439 |
| chr6.1 | exon | 73453687 | 73453781 | 73453687 | ID=MS.gene05439.t1.exon1;Parent=MS.gene05439.t1 |
| chr6.1 | CDS | 73453687 | 73453781 | 73453687 | ID=cds.MS.gene05439.t1;Parent=MS.gene05439.t1 |
| chr6.1 | exon | 73453460 | 73453535 | 73453460 | ID=MS.gene05439.t1.exon2;Parent=MS.gene05439.t1 |
| chr6.1 | CDS | 73453460 | 73453535 | 73453460 | ID=cds.MS.gene05439.t1;Parent=MS.gene05439.t1 |
| chr6.1 | exon | 73452528 | 73452675 | 73452528 | ID=MS.gene05439.t1.exon3;Parent=MS.gene05439.t1 |
| chr6.1 | CDS | 73452528 | 73452675 | 73452528 | ID=cds.MS.gene05439.t1;Parent=MS.gene05439.t1 |
| chr6.1 | exon | 73450286 | 73450696 | 73450286 | ID=MS.gene05439.t1.exon4;Parent=MS.gene05439.t1 |
| chr6.1 | CDS | 73450286 | 73450696 | 73450286 | ID=cds.MS.gene05439.t1;Parent=MS.gene05439.t1 |
| chr6.1 | exon | 73449046 | 73449206 | 73449046 | ID=MS.gene05439.t1.exon5;Parent=MS.gene05439.t1 |
| chr6.1 | CDS | 73449046 | 73449206 | 73449046 | ID=cds.MS.gene05439.t1;Parent=MS.gene05439.t1 |
| chr6.1 | exon | 73448335 | 73448532 | 73448335 | ID=MS.gene05439.t1.exon6;Parent=MS.gene05439.t1 |
| chr6.1 | CDS | 73448335 | 73448532 | 73448335 | ID=cds.MS.gene05439.t1;Parent=MS.gene05439.t1 |
| chr6.1 | exon | 73448101 | 73448200 | 73448101 | ID=MS.gene05439.t1.exon7;Parent=MS.gene05439.t1 |
| chr6.1 | CDS | 73448101 | 73448200 | 73448101 | ID=cds.MS.gene05439.t1;Parent=MS.gene05439.t1 |
| chr6.1 | exon | 73447239 | 73447525 | 73447239 | ID=MS.gene05439.t1.exon8;Parent=MS.gene05439.t1 |
| chr6.1 | CDS | 73447239 | 73447525 | 73447239 | ID=cds.MS.gene05439.t1;Parent=MS.gene05439.t1 |
| Gene Sequence |
| Protein sequence |
