AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51356

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51356.t1 MTR_4g045810 92.955 582 37 3 1 580 1 580 0.0 1113
MS.gene51356.t1 MTR_2g064425 48.452 549 273 8 35 579 42 584 7.11e-169 493
MS.gene51356.t1 MTR_2g065450 45.911 538 280 8 46 579 58 588 2.58e-158 466
MS.gene51356.t1 MTR_2g064425 46.630 549 268 9 35 579 42 569 1.13e-156 461
MS.gene51356.t1 MTR_8g057020 42.908 557 304 9 32 579 36 587 8.98e-148 439
MS.gene51356.t1 MTR_7g010710 41.035 541 306 9 46 578 17 552 6.97e-128 386
MS.gene51356.t1 MTR_4g081460 37.814 558 332 8 31 578 7 559 6.84e-121 369
MS.gene51356.t1 MTR_2g064425 52.279 373 169 7 35 403 42 409 1.86e-115 350
MS.gene51356.t1 MTR_2g089130 40.763 498 268 8 74 558 60 543 2.85e-115 354
MS.gene51356.t1 MTR_2g089120 40.329 486 270 9 83 558 69 544 6.64e-114 351
MS.gene51356.t1 MTR_6g008560 34.581 561 340 8 35 579 6 555 4.02e-109 338
MS.gene51356.t1 MTR_6g039440 34.058 552 349 7 38 579 5 551 1.20e-108 337
MS.gene51356.t1 MTR_4g048460 35.740 554 342 7 35 579 11 559 2.19e-106 331
MS.gene51356.t1 MTR_2g082010 36.396 555 321 15 45 580 26 567 1.74e-103 324
MS.gene51356.t1 MTR_2g064425 49.598 373 164 8 35 403 42 394 2.44e-103 318
MS.gene51356.t1 MTR_3g464190 34.464 560 350 7 31 579 2 555 2.77e-102 320
MS.gene51356.t1 MTR_5g062230 33.333 546 350 6 43 579 11 551 9.72e-102 319
MS.gene51356.t1 MTR_5g094620 33.086 538 337 5 46 579 17 535 4.57e-101 317
MS.gene51356.t1 MTR_2g081980 35.063 559 341 14 37 580 5 556 1.41e-97 308
MS.gene51356.t1 MTR_5g073260 34.884 559 332 10 40 579 5 550 1.44e-97 308
MS.gene51356.t1 MTR_5g073200 35.401 548 331 8 46 579 9 547 1.59e-97 308
MS.gene51356.t1 MTR_8g007515 35.262 553 328 13 46 579 13 554 5.49e-97 306
MS.gene51356.t1 MTR_4g092010 34.205 497 310 9 72 560 54 541 2.94e-94 300
MS.gene51356.t1 MTR_2g082060 34.657 554 321 16 45 579 20 551 6.18e-91 291
MS.gene51356.t1 MTR_4g048460 37.555 458 272 7 35 483 11 463 4.06e-90 286
MS.gene51356.t1 MTR_6g008560 36.160 401 254 2 179 579 1 399 5.34e-85 270
MS.gene51356.t1 MTR_4g019550 33.925 563 320 17 45 580 20 557 1.75e-81 266
MS.gene51356.t1 MTR_4g092020 34.232 482 304 8 86 560 77 552 1.13e-79 261
MS.gene51356.t1 MTR_2g010960 33.661 508 307 13 70 556 2 500 4.85e-79 258
MS.gene51356.t1 MTR_3g465090 32.869 502 314 12 70 556 2 495 5.53e-76 250
MS.gene51356.t1 MTR_3g063170 33.333 498 317 10 70 556 2 495 9.87e-76 250
MS.gene51356.t1 MTR_3g063120 34.681 470 292 9 98 556 6 471 1.63e-74 246
MS.gene51356.t1 MTR_6g064980 33.133 498 318 10 70 556 2 495 1.68e-74 246
MS.gene51356.t1 MTR_3g063140 33.133 498 318 10 70 556 2 495 2.59e-74 246
MS.gene51356.t1 MTR_3g052120 31.538 520 333 14 70 575 2 512 9.95e-70 234
MS.gene51356.t1 MTR_2g082050 31.976 491 269 10 96 580 27 458 1.87e-68 229
MS.gene51356.t1 MTR_6g065040 35.476 389 242 7 174 556 8 393 1.71e-64 217
MS.gene51356.t1 MTR_5g081730 81.081 111 15 2 176 281 2 111 1.37e-51 174
MS.gene51356.t1 MTR_2g012870 32.877 438 260 15 90 503 249 676 5.86e-45 171
MS.gene51356.t1 MTR_2g012900 31.057 454 261 12 90 503 249 690 2.15e-43 166
MS.gene51356.t1 MTR_3g058160 28.761 452 290 14 96 521 66 511 1.41e-41 159
MS.gene51356.t1 MTR_2g064295 28.966 435 278 13 96 505 257 685 2.86e-41 159
MS.gene51356.t1 MTR_3g058160 28.761 452 290 14 96 521 270 715 4.88e-41 159
MS.gene51356.t1 MTR_3g058160 28.761 452 290 14 96 521 277 722 5.26e-41 159
MS.gene51356.t1 MTR_3g058160 28.761 452 290 14 96 521 257 702 5.61e-41 159
MS.gene51356.t1 MTR_3g058160 27.484 473 290 14 96 521 277 743 3.28e-38 150
MS.gene51356.t1 MTR_3g063160 33.788 293 179 7 70 353 2 288 2.25e-34 132
MS.gene51356.t1 MTR_7g050990 39.735 151 80 2 219 369 24 163 6.21e-26 113
MS.gene51356.t1 MTR_7g011663 28.409 352 215 9 98 416 349 696 7.70e-26 113
MS.gene51356.t1 MTR_5g094530 31.455 213 104 5 192 400 4 178 2.57e-22 95.1
MS.gene51356.t1 MTR_7g094970 27.174 276 157 9 98 338 211 477 1.14e-20 96.7
MS.gene51356.t1 MTR_7g011770 24.791 359 219 11 98 416 245 592 4.69e-19 91.7
MS.gene51356.t1 MTR_5g030050 26.415 265 154 8 98 334 3 254 1.10e-18 87.8
MS.gene51356.t1 MTR_7g057340 24.118 170 129 0 410 579 1 170 3.46e-14 71.2
MS.gene51356.t1 MTR_7g057390 22.941 170 128 1 410 579 1 167 9.24e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51356.t1 AT3G25830 41.756 558 303 12 39 579 40 592 1.27e-146 436
MS.gene51356.t1 AT3G25820 41.756 558 303 12 39 579 40 592 1.27e-146 436
MS.gene51356.t1 AT3G25810 41.547 556 298 12 45 579 46 595 1.70e-142 425
MS.gene51356.t1 AT2G24210 40.180 555 313 9 39 579 39 588 6.70e-141 421
MS.gene51356.t1 AT4G16740 41.273 550 294 11 46 579 26 562 3.69e-137 410
MS.gene51356.t1 AT4G16730 37.944 535 314 8 61 579 5 537 1.00e-130 393
MS.gene51356.t1 AT4G16730 39.148 493 287 6 98 579 1 491 5.77e-128 384
MS.gene51356.t1 AT3G25820 41.289 419 224 10 8 414 14 422 2.85e-98 306
MS.gene51356.t1 AT4G16740 43.869 367 184 7 46 398 26 384 6.76e-91 285
MS.gene51356.t1 AT5G23960 31.667 540 360 5 46 579 7 543 4.02e-88 283
MS.gene51356.t1 AT5G23960 31.550 542 360 7 46 579 7 545 3.22e-86 278
MS.gene51356.t1 AT1G61680 33.473 478 310 5 96 569 94 567 2.85e-85 276
MS.gene51356.t1 AT1G70080 33.603 494 312 8 98 580 122 610 2.64e-84 275
MS.gene51356.t1 AT1G61680 33.264 478 304 6 96 569 94 560 5.71e-82 268
MS.gene51356.t1 AT3G29410 31.070 486 331 4 96 579 13 496 7.45e-80 260
MS.gene51356.t1 AT3G29410 29.562 548 378 6 38 579 56 601 4.48e-79 261
MS.gene51356.t1 AT3G25820 42.857 329 171 9 39 355 40 363 4.21e-77 249
MS.gene51356.t1 AT3G25820 42.857 329 171 9 39 355 40 363 4.21e-77 249
MS.gene51356.t1 AT4G16740 42.029 345 178 7 46 376 26 362 2.45e-76 247
MS.gene51356.t1 AT4G16740 42.029 345 178 7 46 376 26 362 2.45e-76 247
MS.gene51356.t1 AT1G33750 29.167 576 397 5 12 579 29 601 1.27e-75 252
MS.gene51356.t1 AT1G31950 28.967 542 371 9 48 579 67 604 2.12e-73 246
MS.gene51356.t1 AT3G14490 29.693 586 388 13 11 579 21 599 5.16e-73 245
MS.gene51356.t1 AT1G31950 28.493 544 372 9 48 579 67 605 5.76e-73 245
MS.gene51356.t1 AT3G14520 28.546 557 374 11 38 579 55 602 9.37e-73 244
MS.gene51356.t1 AT3G14540 28.725 557 373 10 38 579 52 599 5.66e-72 242
MS.gene51356.t1 AT4G15870 29.863 586 380 13 6 579 30 596 1.34e-71 241
MS.gene51356.t1 AT5G44630 31.296 540 339 12 62 579 26 555 9.36e-69 232
MS.gene51356.t1 AT4G20230 30.753 465 314 7 105 564 126 587 2.86e-64 221
MS.gene51356.t1 AT4G20230 30.753 465 314 7 105 564 138 599 2.99e-64 222
MS.gene51356.t1 AT1G48800 30.490 551 353 14 46 577 63 602 1.14e-62 217
MS.gene51356.t1 AT4G20210 30.450 555 351 15 46 579 58 598 1.57e-62 217
MS.gene51356.t1 AT3G32030 26.534 554 391 8 37 579 54 602 1.80e-62 217
MS.gene51356.t1 AT4G20200 29.675 492 330 9 98 580 119 603 1.54e-59 209
MS.gene51356.t1 AT3G29190 28.542 487 340 7 98 579 116 599 1.55e-59 209
MS.gene51356.t1 AT1G31950 28.090 445 306 7 48 482 67 507 3.28e-58 203
MS.gene51356.t1 AT1G48820 29.916 595 340 21 3 574 17 557 3.45e-58 204
MS.gene51356.t1 AT4G13300 29.184 490 335 9 98 580 69 553 4.10e-58 204
MS.gene51356.t1 AT3G14540 28.603 458 306 8 38 482 52 501 1.71e-57 201
MS.gene51356.t1 AT2G23230 27.368 570 400 9 23 580 32 599 5.29e-57 202
MS.gene51356.t1 AT2G23230 27.768 569 394 10 23 580 32 594 2.05e-56 200
MS.gene51356.t1 AT1G66020 29.098 488 338 7 98 580 113 597 1.80e-55 197
MS.gene51356.t1 AT4G13280 28.601 479 330 9 108 579 79 552 1.77e-54 194
MS.gene51356.t1 AT3G29110 27.083 576 385 11 25 579 34 595 3.66e-54 194
MS.gene51356.t1 AT4G13280 28.184 479 302 11 108 579 79 522 1.04e-45 169
MS.gene51356.t1 AT5G48110 30.435 322 218 6 239 559 2 318 1.74e-42 156
MS.gene51356.t1 AT1G66020 35.612 278 171 7 98 370 113 387 6.25e-38 145
MS.gene51356.t1 AT1G79460 27.220 518 330 20 96 580 275 778 1.77e-37 148
MS.gene51356.t1 AT1G61120 27.063 521 333 16 90 580 280 783 5.30e-37 147
MS.gene51356.t1 AT4G02780 31.343 268 146 9 98 333 334 595 6.51e-22 100

Find 106 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTACCAACCCAATATT+TGG 0.147243 4.1:+51152144 MS.gene51356:CDS
CCAAATATTGGGTTGGTAAT+TGG 0.157698 4.1:-51152144 None:intergenic
GATGACATTTATGATGTTTA+TGG 0.162881 4.1:+51154438 MS.gene51356:CDS
AAAATTTGCTTAATGAAAAT+TGG 0.190627 4.1:+51156153 MS.gene51356:CDS
AATTGTTTGAATTAATTAAT+TGG 0.198474 4.1:-51156341 None:intergenic
CGATTCTTTGCCATGGTATC+AGG 0.198740 4.1:-51156296 None:intergenic
TTGAGGTAGTCATCAAATTT+TGG 0.199877 4.1:-51155514 None:intergenic
ATGAAACAGCGTTGAGATTT+AGG 0.218937 4.1:+51152503 MS.gene51356:CDS
CACAATGTTGAAATTCAATT+TGG 0.223651 4.1:-51153615 None:intergenic
GGCTAATGGAATGTTTCTTT+TGG 0.253920 4.1:+51154331 MS.gene51356:CDS
GAAACTAGGAAGTGAGTTAA+AGG 0.269615 4.1:-51152015 None:intergenic
TTAACATTCCTTTGATATCT+TGG 0.275349 4.1:-51153352 None:intergenic
TTTAGGCTCCTTCGTGAATA+TGG 0.275616 4.1:+51152520 MS.gene51356:CDS
GATGTCGTAATTCCAAATAT+TGG 0.277889 4.1:-51152156 None:intergenic
TTATGAAGGAGAGCAAATTT+TGG 0.284931 4.1:+51153400 MS.gene51356:CDS
ATGTCGTAATTCCAAATATT+GGG 0.318295 4.1:-51152155 None:intergenic
GTATATGAAGATATTCTTCT+TGG 0.341174 4.1:+51154662 MS.gene51356:CDS
TAATGCAATTCAAATTCTTC+CGG 0.348756 4.1:+51154638 MS.gene51356:CDS
TACCTTCACTAAGTTCTTTG+AGG 0.366233 4.1:-51153451 None:intergenic
ATATGCTACATGAATGAAAA+TGG 0.368865 4.1:+51156098 MS.gene51356:CDS
AAAGGAGGGGCTTGAGTACT+TGG 0.380341 4.1:+51155609 MS.gene51356:CDS
CTCCATGACCATCTCCATAT+TGG 0.381267 4.1:-51156271 None:intergenic
TCTCACTGCACGTACCAATA+TGG 0.388938 4.1:+51156257 MS.gene51356:CDS
TGATCAAGTGAATCATTCAT+TGG 0.390845 4.1:+51153490 MS.gene51356:CDS
CATGGCAAAGAATCGAATAA+AGG 0.400991 4.1:+51156304 MS.gene51356:CDS
GACACCATCTTGCTTCTTGT+AGG 0.401277 4.1:-51155477 None:intergenic
TATGACACACTTAAAGAAAC+AGG 0.415257 4.1:+51154714 MS.gene51356:CDS
ACCATCGAGCTTCAAGACTT+TGG 0.415778 4.1:-51153535 None:intergenic
CACGACCAAAGCTTAACCTT+GGG 0.417065 4.1:-51154305 None:intergenic
ACATATGAAGGTGGTGGAAG+GGG 0.417594 4.1:+51154271 MS.gene51356:intron
GGTTAAGCTTTGGTCGTGAT+AGG 0.419053 4.1:+51154310 MS.gene51356:CDS
CTTTGGTCGTGATAGGCTAA+TGG 0.425070 4.1:+51154317 MS.gene51356:CDS
TCACTAAACTGAGGCTCAAA+TGG 0.444620 4.1:-51154369 None:intergenic
TGTGCAATCAACTCTTCAAC+AGG 0.451044 4.1:+51153634 MS.gene51356:CDS
ATCGATACTGTGAAACAATT+AGG 0.459297 4.1:+51152388 MS.gene51356:CDS
GAAGTGGAGAACCATTTCTA+TGG 0.461629 4.1:-51152076 None:intergenic
ATGAAGGTGGTGGAAGGGGA+TGG 0.461912 4.1:+51154275 MS.gene51356:intron
AATAATCTCAGCCATAGAAA+TGG 0.464760 4.1:+51152065 MS.gene51356:CDS
CTCGATACGTGGATAGTAGT+AGG 0.472011 4.1:+51152305 MS.gene51356:CDS
GGAAGTAAGAAGAATGATCA+AGG 0.472360 4.1:+51152339 MS.gene51356:CDS
CAATGATTTGGCTACTTCAT+CGG 0.474012 4.1:+51155681 MS.gene51356:CDS
CTAGCCCCAAGGTTAAGCTT+TGG 0.484468 4.1:+51154300 MS.gene51356:CDS
AGATAGGAGAAGCCCTTGAC+AGG 0.489379 4.1:+51152434 MS.gene51356:CDS
GATTCTTTGCCATGGTATCA+GGG 0.502496 4.1:-51156295 None:intergenic
TGAAGGTGGTGGAAGGGGAT+GGG 0.505139 4.1:+51154276 MS.gene51356:intron
GCATCATTTCTATCTTATGA+AGG 0.509979 4.1:+51153386 MS.gene51356:CDS
TACCACTTCGAAAAGGAGAT+AGG 0.510288 4.1:+51152418 MS.gene51356:CDS
AAGGAAGAGTTCAACAACAT+TGG 0.512213 4.1:-51151996 None:intergenic
AATGCATGGGTGTCTGTGTC+CGG 0.517247 4.1:+51155538 MS.gene51356:CDS
CTTCACTAAGTTCTTTGAGG+TGG 0.519302 4.1:-51153448 None:intergenic
TTCTTCAAATCTCAAGAACT+AGG 0.521875 4.1:+51152035 MS.gene51356:CDS
CTTTATTCGATTCTTTGCCA+TGG 0.524173 4.1:-51156303 None:intergenic
TTGCAGGCGGAGTTAGAAAG+AGG 0.529922 4.1:+51156056 MS.gene51356:intron
CGTAATTCCAAATATTGGGT+TGG 0.531216 4.1:-51152151 None:intergenic
TCTTGAGATTTGAAGAAACT+AGG 0.535631 4.1:-51152029 None:intergenic
TACATATGAAGGTGGTGGAA+GGG 0.538647 4.1:+51154270 MS.gene51356:intron
TCACGACCAAAGCTTAACCT+TGG 0.543926 4.1:-51154306 None:intergenic
AAGAATATCTTCATATACTC+CGG 0.545115 4.1:-51154657 None:intergenic
AGTAATTAGAGAGCACACTT+TGG 0.548156 4.1:-51154409 None:intergenic
ACAGTGGTCTGATATGTTGA+AGG 0.552217 4.1:+51155450 MS.gene51356:intron
CCTCGGTTACCACTTCGAAA+AGG 0.555032 4.1:+51152411 MS.gene51356:CDS
TTACATATGAAGGTGGTGGA+AGG 0.555487 4.1:+51154269 MS.gene51356:intron
TCATGGAGCCCCTGATACCA+TGG 0.560232 4.1:+51156286 MS.gene51356:CDS
CTTTGGACTCTACGATGTAG+TGG 0.570277 4.1:-51153518 None:intergenic
TCAGTTTAGTGATATGCGCA+AGG 0.571438 4.1:+51154380 MS.gene51356:CDS
ATGACTACCTCAACAATGCA+TGG 0.572804 4.1:+51155524 MS.gene51356:CDS
AATGATTCACTTGATCAAAG+AGG 0.573638 4.1:-51153484 None:intergenic
TTAGTAGCGTAACATAGAAG+TGG 0.576392 4.1:-51152092 None:intergenic
ACTGTGAAACAATTAGGCCT+CGG 0.578931 4.1:+51152394 MS.gene51356:CDS
TCCAAAGTCTTGAAGCTCGA+TGG 0.580370 4.1:+51153534 MS.gene51356:CDS
AATCGTAACATAACAAAGGA+GGG 0.583261 4.1:+51155595 MS.gene51356:CDS
CATTCCTACAAGAAGCAAGA+TGG 0.585069 4.1:+51155473 MS.gene51356:CDS
CAGTTTAGTGATATGCGCAA+GGG 0.586945 4.1:+51154381 MS.gene51356:CDS
TAGTAGTAGGAGGCTGCAAG+AGG 0.592977 4.1:+51152318 MS.gene51356:CDS
AAGGACGAAGGACGCAAACA+AGG 0.597113 4.1:+51153577 MS.gene51356:CDS
GCGGAGTTAGAAAGAGGTGA+AGG 0.597815 4.1:+51156062 MS.gene51356:CDS
TTATGATGTTTATGGCACCT+TGG 0.599831 4.1:+51154446 MS.gene51356:CDS
TCATACCGCTTTGACAAGGT+AGG 0.603491 4.1:-51154751 None:intergenic
ATCGTAACATAACAAAGGAG+GGG 0.606500 4.1:+51155596 MS.gene51356:CDS
GCTAAATCGTAACATAACAA+AGG 0.606945 4.1:+51155591 MS.gene51356:CDS
ATTCTTTGCCATGGTATCAG+GGG 0.608231 4.1:-51156294 None:intergenic
TATGGTTATGATGTTTCACC+AGG 0.609667 4.1:+51152538 MS.gene51356:CDS
AAATCGTAACATAACAAAGG+AGG 0.612370 4.1:+51155594 MS.gene51356:CDS
CATACCGCTTTGACAAGGTA+GGG 0.613885 4.1:-51154750 None:intergenic
TGTCTTGTCCAAGATATCAA+AGG 0.617651 4.1:+51153344 MS.gene51356:CDS
ATCTTTGAAACACGATTATG+CGG 0.619270 4.1:+51152184 MS.gene51356:CDS
TTTCTAGGATGCTCGATACG+TGG 0.619384 4.1:+51152294 MS.gene51356:intron
TACCAATATGGAGATGGTCA+TGG 0.623302 4.1:+51156269 MS.gene51356:CDS
AGGGGATGGGACTAGCCCCA+AGG 0.624304 4.1:+51154289 MS.gene51356:CDS
TGCACGTACCAATATGGAGA+TGG 0.629166 4.1:+51156263 MS.gene51356:CDS
CACCTCAAAGAACTTAGTGA+AGG 0.629751 4.1:+51153449 MS.gene51356:CDS
GAATGAAAATGGTGTTAGTG+AGG 0.637998 4.1:+51156109 MS.gene51356:CDS
TCTTCCCTACCTTGTCAAAG+CGG 0.642377 4.1:+51154746 MS.gene51356:CDS
TGCAGTGAGAAATTCTAGCA+AGG 0.643300 4.1:-51156244 None:intergenic
AGGATCTTAAAGAAACGTCA+AGG 0.646273 4.1:+51153654 MS.gene51356:CDS
TTGGTCATACCGCTTTGACA+AGG 0.662027 4.1:-51154755 None:intergenic
GTGGATGCTAGTGAAAGCAT+TGG 0.666886 4.1:-51153429 None:intergenic
CAGACACCCATGCATTGTTG+AGG 0.669111 4.1:-51155531 None:intergenic
TGAAAATGGTGTTAGTGAGG+AGG 0.675695 4.1:+51156112 MS.gene51356:CDS
TGACTACCTCAACAATGCAT+GGG 0.680426 4.1:+51155525 MS.gene51356:CDS
GATACGTGGATAGTAGTAGG+AGG 0.680960 4.1:+51152308 MS.gene51356:CDS
ATGGGTCATTAAAACTACAC+CGG 0.683255 4.1:-51155557 None:intergenic
CATCATAACCATATTCACGA+AGG 0.689359 4.1:-51152528 None:intergenic
ACGACCAAAGCTTAACCTTG+GGG 0.696222 4.1:-51154304 None:intergenic
TTGCGCATATCACTAAACTG+AGG 0.729129 4.1:-51154378 None:intergenic
AGGAATGTTAAGTCTCTACG+AGG 0.767381 4.1:+51153364 MS.gene51356:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTTTTTTTTTTTTT+TGG + chr4.1:51154505-51154524 MS.gene51356:intron 0.0%
!! AAATTATATAACAAATCAAT+TGG - chr4.1:51156037-51156056 None:intergenic 10.0%
!!! TTATAAATCAGTAATTTTTT+AGG - chr4.1:51152695-51152714 None:intergenic 10.0%
!!! TTATATTTTGTATTATTTCT+AGG + chr4.1:51152279-51152298 MS.gene51356:intron 10.0%
!!! TTTTTTTTTAGAGAAAAAAT+TGG - chr4.1:51155296-51155315 None:intergenic 10.0%
!! AGGTATATGTTAAAAAAAAA+AGG - chr4.1:51155034-51155053 None:intergenic 15.0%
!! ATATTGCTAAAAAAAACATA+TGG - chr4.1:51154103-51154122 None:intergenic 15.0%
!! TCCTTAAAAAAAACAAAAAT+TGG + chr4.1:51154816-51154835 MS.gene51356:intron 15.0%
!! TTATTTCATTTACAAATTTG+AGG - chr4.1:51153986-51154005 None:intergenic 15.0%
!!! AAAATTTGCTTAATGAAAAT+TGG + chr4.1:51156153-51156172 MS.gene51356:CDS 15.0%
!!! AATTTTCATTAAGCAAATTT+TGG - chr4.1:51156154-51156173 None:intergenic 15.0%
!!! ACCAATTTTTGTTTTTTTTA+AGG - chr4.1:51154820-51154839 None:intergenic 15.0%
!!! ATATTGATTCATATGAAAAA+AGG + chr4.1:51153558-51153577 MS.gene51356:CDS 15.0%
!!! ATATTTTCAACTTATTACAA+CGG + chr4.1:51152918-51152937 MS.gene51356:intron 15.0%
!!! TATCGATATATATCTTTTTT+TGG - chr4.1:51152853-51152872 None:intergenic 15.0%
!!! TATTTTTCTTTTACATATGA+AGG + chr4.1:51154259-51154278 MS.gene51356:intron 15.0%
!!! TTTAAAATTATTAACTGTAC+CGG - chr4.1:51155858-51155877 None:intergenic 15.0%
!!! TTTTTTATAAGCTATACAAT+TGG - chr4.1:51154169-51154188 None:intergenic 15.0%
!! AAAATTATGTTTCTTTCAGA+TGG + chr4.1:51154610-51154629 MS.gene51356:intron 20.0%
!! AAATTATGTTTCTTTCAGAT+GGG + chr4.1:51154611-51154630 MS.gene51356:intron 20.0%
!! ACAGTTGAATAGATAAAATT+TGG - chr4.1:51155321-51155340 None:intergenic 20.0%
!! ATAATTTAGTTGTTAAGAAC+CGG - chr4.1:51155128-51155147 None:intergenic 20.0%
!! ATTTAGCAAAAAATAGGAAT+GGG - chr4.1:51155578-51155597 None:intergenic 20.0%
!! CTTATATTAGATGGAAAAAT+TGG - chr4.1:51153851-51153870 None:intergenic 20.0%
!! GTGTGATCATAAATATATTA+TGG - chr4.1:51155355-51155374 None:intergenic 20.0%
!! TACAAAATTAACGTTTAGTT+TGG - chr4.1:51152967-51152986 None:intergenic 20.0%
!!! AATAAAGTCTAAAATTTGGT+GGG - chr4.1:51155079-51155098 None:intergenic 20.0%
!!! ACCAAATTTTAGACTTTATT+AGG + chr4.1:51155079-51155098 MS.gene51356:intron 20.0%
!!! ACCACTAAAAAAGATTTTTA+AGG + chr4.1:51153080-51153099 MS.gene51356:intron 20.0%
!!! ACCTTAAAAATCTTTTTTAG+TGG - chr4.1:51153084-51153103 None:intergenic 20.0%
!!! AGACACTTTACAATTTTATT+AGG + chr4.1:51153104-51153123 MS.gene51356:intron 20.0%
!!! AGATATTTTTGAGATGTTTA+AGG + chr4.1:51153298-51153317 MS.gene51356:intron 20.0%
!!! AGATGTTTTTCTATATGATT+AGG + chr4.1:51153242-51153261 MS.gene51356:intron 20.0%
!!! CCAAATTTTAGACTTTATTA+GGG + chr4.1:51155080-51155099 MS.gene51356:intron 20.0%
!!! CTATATTTTGTCAACTATTA+TGG - chr4.1:51152620-51152639 None:intergenic 20.0%
!!! CTTTTTCAAATATATTACAG+TGG + chr4.1:51155434-51155453 MS.gene51356:intron 20.0%
!!! GATTTGTTATATAATTTTGC+AGG + chr4.1:51156040-51156059 MS.gene51356:intron 20.0%
!!! TAAATTTTGAGCAAAACTAA+GGG + chr4.1:51154872-51154891 MS.gene51356:intron 20.0%
!!! TAATAAAGTCTAAAATTTGG+TGG - chr4.1:51155080-51155099 None:intergenic 20.0%
!!! TATATATCTTTTTTTGGTAG+TGG - chr4.1:51152847-51152866 None:intergenic 20.0%
!!! TATTTTCAACTTATTACAAC+GGG + chr4.1:51152919-51152938 MS.gene51356:intron 20.0%
!!! TTAAATTTTGAGCAAAACTA+AGG + chr4.1:51154871-51154890 MS.gene51356:intron 20.0%
!!! TTTTTAGAGAAAAAATTGGA+GGG - chr4.1:51155292-51155311 None:intergenic 20.0%
!!! TTTTTTAGAGAAAAAATTGG+AGG - chr4.1:51155293-51155312 None:intergenic 20.0%
!!! TTTTTTTTTGGTTACAAGAA+AGG + chr4.1:51154517-51154536 MS.gene51356:intron 20.0%
! AAAAAAGATCTTCATCATTG+TGG - chr4.1:51153269-51153288 None:intergenic 25.0%
! AAGAATATCTTCATATACTC+CGG - chr4.1:51154660-51154679 None:intergenic 25.0%
! AATTTAGATTTAGGTACACA+TGG + chr4.1:51154951-51154970 MS.gene51356:intron 25.0%
! ACTACAATGGTACAATATTT+AGG - chr4.1:51153032-51153051 None:intergenic 25.0%
! AGCAAAATTTGTATATTCAC+AGG + chr4.1:51154921-51154940 MS.gene51356:intron 25.0%
! AGCTATACAATTGGTATAAT+AGG - chr4.1:51154160-51154179 None:intergenic 25.0%
! ATAATATGCATGTATGGTTA+AGG - chr4.1:51155725-51155744 None:intergenic 25.0%
! ATATGCTACATGAATGAAAA+TGG + chr4.1:51156098-51156117 MS.gene51356:CDS 25.0%
! ATGTCGTAATTCCAAATATT+GGG - chr4.1:51152158-51152177 None:intergenic 25.0%
! ATTGCAAAGTCGAAAAATTA+TGG - chr4.1:51155665-51155684 None:intergenic 25.0%
! CACAATGTTGAAATTCAATT+TGG - chr4.1:51153618-51153637 None:intergenic 25.0%
! CATTGTAGTATATGATAAAC+AGG + chr4.1:51153043-51153062 MS.gene51356:intron 25.0%
! CTATACGAATCTTCAAAATT+GGG - chr4.1:51153131-51153150 None:intergenic 25.0%
! CTCAAAACTATAATGTCTTA+AGG - chr4.1:51153801-51153820 None:intergenic 25.0%
! CTGTTTATCATATACTACAA+TGG - chr4.1:51153045-51153064 None:intergenic 25.0%
! GAAAAATGGACAAACAATAA+TGG + chr4.1:51152469-51152488 MS.gene51356:CDS 25.0%
! GATATGATAATATGCATGTA+TGG - chr4.1:51155731-51155750 None:intergenic 25.0%
! GATGACATTTATGATGTTTA+TGG + chr4.1:51154438-51154457 MS.gene51356:CDS 25.0%
! GATTTAGCAAAAAATAGGAA+TGG - chr4.1:51155579-51155598 None:intergenic 25.0%
! GCAAAATTTGTATATTCACA+GGG + chr4.1:51154922-51154941 MS.gene51356:intron 25.0%
! GCTATACAATTGGTATAATA+GGG - chr4.1:51154159-51154178 None:intergenic 25.0%
! GGGCTAAATAATTTAGATTT+AGG + chr4.1:51154942-51154961 MS.gene51356:intron 25.0%
! GTATATGAAGATATTCTTCT+TGG + chr4.1:51154662-51154681 MS.gene51356:CDS 25.0%
! GTTACGATTTAGCAAAAAAT+AGG - chr4.1:51155584-51155603 None:intergenic 25.0%
! TAATGCAATTCAAATTCTTC+CGG + chr4.1:51154638-51154657 MS.gene51356:CDS 25.0%
! TCTATACGAATCTTCAAAAT+TGG - chr4.1:51153132-51153151 None:intergenic 25.0%
! TGATCATCAAATTAGATCTT+GGG + chr4.1:51153750-51153769 MS.gene51356:intron 25.0%
! TTAACATTCCTTTGATATCT+TGG - chr4.1:51153355-51153374 None:intergenic 25.0%
! TTGATCATCAAATTAGATCT+TGG + chr4.1:51153749-51153768 MS.gene51356:intron 25.0%
!! ATGCCTTAAAATTTTCATTG+TGG - chr4.1:51153325-51153344 None:intergenic 25.0%
!! CATATATCTCAAATTAGCTT+TGG + chr4.1:51155227-51155246 MS.gene51356:intron 25.0%
!! CCCTAATAAAGTCTAAAATT+TGG - chr4.1:51155083-51155102 None:intergenic 25.0%
!! GAGAATGATTTCATTTTGTT+GGG + chr4.1:51153709-51153728 MS.gene51356:intron 25.0%
!! TGAATTAGAGCTTTTTACAA+CGG + chr4.1:51154470-51154489 MS.gene51356:CDS 25.0%
!! TGAGAATGATTTCATTTTGT+TGG + chr4.1:51153708-51153727 MS.gene51356:intron 25.0%
!! TTGTTATATAATTTTGCAGG+CGG + chr4.1:51156043-51156062 MS.gene51356:intron 25.0%
!! TTTTCTTTTACATATGAAGG+TGG + chr4.1:51154262-51154281 MS.gene51356:intron 25.0%
!!! ATTGATGTGCAACTTTTTTT+TGG - chr4.1:51155800-51155819 None:intergenic 25.0%
!!! GGTTTTTATCTTTGGAAAAA+TGG + chr4.1:51152455-51152474 MS.gene51356:CDS 25.0%
!!! TAGCTTTCTGAAACTAAAAA+TGG - chr4.1:51153159-51153178 None:intergenic 25.0%
!!! TCTGAAAAATATTTTGAGGA+AGG - chr4.1:51156212-51156231 None:intergenic 25.0%
!!! TGTCTCTGAAAAATATTTTG+AGG - chr4.1:51156216-51156235 None:intergenic 25.0%
!!! TTATTGAATTTTTCTAGCCA+AGG + chr4.1:51155166-51155185 MS.gene51356:intron 25.0%
AAATAACCACACAAGTGAAA+GGG - chr4.1:51153875-51153894 None:intergenic 30.0%
AAATCGTAACATAACAAAGG+AGG + chr4.1:51155594-51155613 MS.gene51356:CDS 30.0%
AATAATCTCAGCCATAGAAA+TGG + chr4.1:51152065-51152084 MS.gene51356:CDS 30.0%
AATCAATTGGATTGAGTACT+CGG - chr4.1:51156024-51156043 None:intergenic 30.0%
AATCGTAACATAACAAAGGA+GGG + chr4.1:51155595-51155614 MS.gene51356:CDS 30.0%
AATGATTCACTTGATCAAAG+AGG - chr4.1:51153487-51153506 None:intergenic 30.0%
AGTTGCACATCAATAAATCA+CGG + chr4.1:51155806-51155825 MS.gene51356:intron 30.0%
ATCGATACTGTGAAACAATT+AGG + chr4.1:51152388-51152407 MS.gene51356:CDS 30.0%
CAAAGATAAAAACCTGTCAA+GGG - chr4.1:51152449-51152468 None:intergenic 30.0%
CAAAGTCGAAAAATTATGGA+CGG - chr4.1:51155661-51155680 None:intergenic 30.0%
CATAAAATATGCAAGGTTTG+GGG + chr4.1:51152809-51152828 MS.gene51356:intron 30.0%
GACAATGCATAAAATATGCA+AGG + chr4.1:51152802-51152821 MS.gene51356:intron 30.0%
GATGTCGTAATTCCAAATAT+TGG - chr4.1:51152159-51152178 None:intergenic 30.0%
GATGTTGGACACTATATAAA+TGG - chr4.1:51153829-51153848 None:intergenic 30.0%
GCATAAAATATGCAAGGTTT+GGG + chr4.1:51152808-51152827 MS.gene51356:intron 30.0%
GCATCATTTCTATCTTATGA+AGG + chr4.1:51153386-51153405 MS.gene51356:CDS 30.0%
GCTAAATCGTAACATAACAA+AGG + chr4.1:51155591-51155610 MS.gene51356:CDS 30.0%
GGTATAATAGGGTAGAAAAA+AGG - chr4.1:51154148-51154167 None:intergenic 30.0%
TAAAAACCACGTTCACAAAA+TGG + chr4.1:51154785-51154804 MS.gene51356:intron 30.0%
TAAATAACCACACAAGTGAA+AGG - chr4.1:51153876-51153895 None:intergenic 30.0%
TAGATGGAAAAATTGGATGT+TGG - chr4.1:51153844-51153863 None:intergenic 30.0%
TATGACACACTTAAAGAAAC+AGG + chr4.1:51154714-51154733 MS.gene51356:CDS 30.0%
TCTTGAGATTTGAAGAAACT+AGG - chr4.1:51152032-51152051 None:intergenic 30.0%
TGATCAAGTGAATCATTCAT+TGG + chr4.1:51153490-51153509 MS.gene51356:CDS 30.0%
TGCATAAAATATGCAAGGTT+TGG + chr4.1:51152807-51152826 MS.gene51356:intron 30.0%
TTCATATGAAAAAAGGACGA+AGG + chr4.1:51153565-51153584 MS.gene51356:CDS 30.0%
TTCTTCAAATCTCAAGAACT+AGG + chr4.1:51152035-51152054 MS.gene51356:CDS 30.0%
! AAAAAGCTCTAATTCATCCA+AGG - chr4.1:51154466-51154485 None:intergenic 30.0%
! GCTAATGGAATGTTTCTTTT+GGG + chr4.1:51154332-51154351 MS.gene51356:CDS 30.0%
! GGACCACAATGAAAATTTTA+AGG + chr4.1:51153319-51153338 MS.gene51356:CDS 30.0%
! TGAAAGGGTCTTATATTAGA+TGG - chr4.1:51153860-51153879 None:intergenic 30.0%
! TTATGAAGGAGAGCAAATTT+TGG + chr4.1:51153400-51153419 MS.gene51356:CDS 30.0%
! TTGAGGTAGTCATCAAATTT+TGG - chr4.1:51155517-51155536 None:intergenic 30.0%
! TTTTCGACTTTGCAATGATT+TGG + chr4.1:51155669-51155688 MS.gene51356:CDS 30.0%
!! ATCTTTGAAACACGATTATG+CGG + chr4.1:51152184-51152203 MS.gene51356:CDS 30.0%
!!! TTTTTTGTCAAGTAGTCTAG+TGG + chr4.1:51152219-51152238 MS.gene51356:intron 30.0%
ACACAACACATATCAAACAC+CGG + chr4.1:51155918-51155937 MS.gene51356:intron 35.0%
ACATGCTTAGAACATGTCTT+AGG + chr4.1:51154845-51154864 MS.gene51356:intron 35.0%
AGGATCTTAAAGAAACGTCA+AGG + chr4.1:51153654-51153673 MS.gene51356:CDS 35.0%
ATATCTATCGATAGCTCAGT+TGG + chr4.1:51152776-51152795 MS.gene51356:intron 35.0%
ATCGTAACATAACAAAGGAG+GGG + chr4.1:51155596-51155615 MS.gene51356:CDS 35.0%
ATGCATGTATGGTTAAGGTA+AGG - chr4.1:51155720-51155739 None:intergenic 35.0%
ATGGGTCATTAAAACTACAC+CGG - chr4.1:51155560-51155579 None:intergenic 35.0%
ATGTTCGAAGTCACAATTTC+CGG + chr4.1:51155106-51155125 MS.gene51356:intron 35.0%
CATCATAACCATATTCACGA+AGG - chr4.1:51152531-51152550 None:intergenic 35.0%
CATGCTTAGAACATGTCTTA+GGG + chr4.1:51154846-51154865 MS.gene51356:intron 35.0%
CATGGCAAAGAATCGAATAA+AGG + chr4.1:51156304-51156323 MS.gene51356:CDS 35.0%
CCAAAGATAAAAACCTGTCA+AGG - chr4.1:51152450-51152469 None:intergenic 35.0%
CCAATTACCAACCCAATATT+TGG + chr4.1:51152144-51152163 MS.gene51356:CDS 35.0%
CGTAATTCCAAATATTGGGT+TGG - chr4.1:51152154-51152173 None:intergenic 35.0%
CTTTATTCGATTCTTTGCCA+TGG - chr4.1:51156306-51156325 None:intergenic 35.0%
GAAACTAGGAAGTGAGTTAA+AGG - chr4.1:51152018-51152037 None:intergenic 35.0%
GGAAGTAAGAAGAATGATCA+AGG + chr4.1:51152339-51152358 MS.gene51356:CDS 35.0%
TACCTTCACTAAGTTCTTTG+AGG - chr4.1:51153454-51153473 None:intergenic 35.0%
TATGGTTATGATGTTTCACC+AGG + chr4.1:51152538-51152557 MS.gene51356:CDS 35.0%
TGTCTTGTCCAAGATATCAA+AGG + chr4.1:51153344-51153363 MS.gene51356:CDS 35.0%
TTAGTAGCGTAACATAGAAG+TGG - chr4.1:51152095-51152114 None:intergenic 35.0%
TTATGATGTTTATGGCACCT+TGG + chr4.1:51154446-51154465 MS.gene51356:CDS 35.0%
! AAAAACCACGTTTAAAGCCT+TGG - chr4.1:51155186-51155205 None:intergenic 35.0%
! AAAAACCGCGTTTAAAGTCT+TGG - chr4.1:51155007-51155026 None:intergenic 35.0%
! ACGTGGTTTTTATGTGAGTT+TGG - chr4.1:51154777-51154796 None:intergenic 35.0%
! AGTAATTAGAGAGCACACTT+TGG - chr4.1:51154412-51154431 None:intergenic 35.0%
! ATGAAACAGCGTTGAGATTT+AGG + chr4.1:51152503-51152522 MS.gene51356:CDS 35.0%
! CAATGATTTGGCTACTTCAT+CGG + chr4.1:51155681-51155700 MS.gene51356:CDS 35.0%
! CCTTGACAGGTTTTTATCTT+TGG + chr4.1:51152447-51152466 MS.gene51356:CDS 35.0%
! GAATGAAAATGGTGTTAGTG+AGG + chr4.1:51156109-51156128 MS.gene51356:CDS 35.0%
! GGCTAATGGAATGTTTCTTT+TGG + chr4.1:51154331-51154350 MS.gene51356:CDS 35.0%
! TACAAATTTGAGGTGAATCG+TGG - chr4.1:51153976-51153995 None:intergenic 35.0%
! TCTTTTACATATGAAGGTGG+TGG + chr4.1:51154265-51154284 MS.gene51356:intron 35.0%
! TTCTAACCATTTTGTGAACG+TGG - chr4.1:51154794-51154813 None:intergenic 35.0%
! TTTTTACAACGGCAGTAGAA+AGG + chr4.1:51154481-51154500 MS.gene51356:CDS 35.0%
!! CCAAATATTGGGTTGGTAAT+TGG - chr4.1:51152147-51152166 None:intergenic 35.0%
!!! TATCTTTTTTTGGTAGTGGC+CGG - chr4.1:51152843-51152862 None:intergenic 35.0%
AAATGTGCGACTATGAAGCA+CGG - chr4.1:51155967-51155986 None:intergenic 40.0%
ACAGTGGTCTGATATGTTGA+AGG + chr4.1:51155450-51155469 MS.gene51356:intron 40.0%
ACTGTGAAACAATTAGGCCT+CGG + chr4.1:51152394-51152413 MS.gene51356:CDS 40.0%
AGGAATGTTAAGTCTCTACG+AGG + chr4.1:51153364-51153383 MS.gene51356:CDS 40.0%
ATAACTCCATTGGGACATGA+TGG - chr4.1:51153925-51153944 None:intergenic 40.0%
ATAAGACCCTTTCACTTGTG+TGG + chr4.1:51153866-51153885 MS.gene51356:intron 40.0%
ATCATGTCCCAATGGAGTTA+TGG + chr4.1:51153924-51153943 MS.gene51356:intron 40.0%
ATGACTACCTCAACAATGCA+TGG + chr4.1:51155524-51155543 MS.gene51356:CDS 40.0%
ATTCTTTGCCATGGTATCAG+GGG - chr4.1:51156297-51156316 None:intergenic 40.0%
CACCTCAAAGAACTTAGTGA+AGG + chr4.1:51153449-51153468 MS.gene51356:CDS 40.0%
CAGTTTAGTGATATGCGCAA+GGG + chr4.1:51154381-51154400 MS.gene51356:CDS 40.0%
CATTCCTACAAGAAGCAAGA+TGG + chr4.1:51155473-51155492 MS.gene51356:CDS 40.0%
GAAGTGGAGAACCATTTCTA+TGG - chr4.1:51152079-51152098 None:intergenic 40.0%
GATTCTTTGCCATGGTATCA+GGG - chr4.1:51156298-51156317 None:intergenic 40.0%
GCTTCATAGTCGCACATTTA+AGG + chr4.1:51155968-51155987 MS.gene51356:intron 40.0%
TAACTCCATTGGGACATGAT+GGG - chr4.1:51153924-51153943 None:intergenic 40.0%
TACCAATATGGAGATGGTCA+TGG + chr4.1:51156269-51156288 MS.gene51356:CDS 40.0%
TACCACTTCGAAAAGGAGAT+AGG + chr4.1:51152418-51152437 MS.gene51356:CDS 40.0%
TCACTAAACTGAGGCTCAAA+TGG - chr4.1:51154372-51154391 None:intergenic 40.0%
TCAGTTTAGTGATATGCGCA+AGG + chr4.1:51154380-51154399 MS.gene51356:CDS 40.0%
TCATCGGATTAAACGTGTTC+CGG - chr4.1:51155940-51155959 None:intergenic 40.0%
TCCCAAACCATAACTCCATT+GGG - chr4.1:51153934-51153953 None:intergenic 40.0%
TCCCAATGGAGTTATGGTTT+GGG + chr4.1:51153930-51153949 MS.gene51356:intron 40.0%
TCTAGCCAAGACTTTAAACG+CGG + chr4.1:51154999-51155018 MS.gene51356:intron 40.0%
TGACTACCTCAACAATGCAT+GGG + chr4.1:51155525-51155544 MS.gene51356:CDS 40.0%
TGCAGTGAGAAATTCTAGCA+AGG - chr4.1:51156247-51156266 None:intergenic 40.0%
TGTGCAATCAACTCTTCAAC+AGG + chr4.1:51153634-51153653 MS.gene51356:CDS 40.0%
TTCCCAAACCATAACTCCAT+TGG - chr4.1:51153935-51153954 None:intergenic 40.0%
TTGCGCATATCACTAAACTG+AGG - chr4.1:51154381-51154400 None:intergenic 40.0%
TTTAGGCTCCTTCGTGAATA+TGG + chr4.1:51152520-51152539 MS.gene51356:CDS 40.0%
TTTGGGAATGAAGTCGTGAT+CGG + chr4.1:51153947-51153966 MS.gene51356:intron 40.0%
! CTTCACTAAGTTCTTTGAGG+TGG - chr4.1:51153451-51153470 None:intergenic 40.0%
! TGAAAATGGTGTTAGTGAGG+AGG + chr4.1:51156112-51156131 MS.gene51356:CDS 40.0%
!! TACATATGAAGGTGGTGGAA+GGG + chr4.1:51154270-51154289 MS.gene51356:intron 40.0%
!! TGTGTAGCTCAACTGATTTG+AGG - chr4.1:51155054-51155073 None:intergenic 40.0%
!! TTACATATGAAGGTGGTGGA+AGG + chr4.1:51154269-51154288 MS.gene51356:intron 40.0%
AAGCCTAATGTGATGCTCCT+CGG + chr4.1:51153896-51153915 MS.gene51356:intron 45.0%
ACCATCGAGCTTCAAGACTT+TGG - chr4.1:51153538-51153557 None:intergenic 45.0%
ACGACCAAAGCTTAACCTTG+GGG - chr4.1:51154307-51154326 None:intergenic 45.0%
CACGACCAAAGCTTAACCTT+GGG - chr4.1:51154308-51154327 None:intergenic 45.0%
CATACCGCTTTGACAAGGTA+GGG - chr4.1:51154753-51154772 None:intergenic 45.0%
CGATTCTTTGCCATGGTATC+AGG - chr4.1:51156299-51156318 None:intergenic 45.0%
CTATCGATAGCTCAGTTGGT+TGG + chr4.1:51152780-51152799 MS.gene51356:intron 45.0%
CTCCATGACCATCTCCATAT+TGG - chr4.1:51156274-51156293 None:intergenic 45.0%
CTCGATACGTGGATAGTAGT+AGG + chr4.1:51152305-51152324 MS.gene51356:CDS 45.0%
CTTTGGACTCTACGATGTAG+TGG - chr4.1:51153521-51153540 None:intergenic 45.0%
CTTTGGTCGTGATAGGCTAA+TGG + chr4.1:51154317-51154336 MS.gene51356:CDS 45.0%
GACACCATCTTGCTTCTTGT+AGG - chr4.1:51155480-51155499 None:intergenic 45.0%
GATACGTGGATAGTAGTAGG+AGG + chr4.1:51152308-51152327 MS.gene51356:CDS 45.0%
GTCCCAATGGAGTTATGGTT+TGG + chr4.1:51153929-51153948 MS.gene51356:intron 45.0%
TATGAAGCACGGACACTCAT+CGG - chr4.1:51155956-51155975 None:intergenic 45.0%
TCACGACCAAAGCTTAACCT+TGG - chr4.1:51154309-51154328 None:intergenic 45.0%
TCATACCGCTTTGACAAGGT+AGG - chr4.1:51154754-51154773 None:intergenic 45.0%
TCCAAAGTCTTGAAGCTCGA+TGG + chr4.1:51153534-51153553 MS.gene51356:CDS 45.0%
TCTCACTGCACGTACCAATA+TGG + chr4.1:51156257-51156276 MS.gene51356:CDS 45.0%
TCTTCCCTACCTTGTCAAAG+CGG + chr4.1:51154746-51154765 MS.gene51356:CDS 45.0%
TGCACGTACCAATATGGAGA+TGG + chr4.1:51156263-51156282 MS.gene51356:CDS 45.0%
TTGGGAATGAAGTCGTGATC+GGG + chr4.1:51153948-51153967 MS.gene51356:intron 45.0%
TTGGTCATACCGCTTTGACA+AGG - chr4.1:51154758-51154777 None:intergenic 45.0%
! CTCCTATCTCCTTTTCGAAG+TGG - chr4.1:51152423-51152442 None:intergenic 45.0%
! GAATGTTTCTTTTGGGCTGC+TGG + chr4.1:51154339-51154358 MS.gene51356:CDS 45.0%
! GGTTAAGCTTTGGTCGTGAT+AGG + chr4.1:51154310-51154329 MS.gene51356:CDS 45.0%
! GTGGATGCTAGTGAAAGCAT+TGG - chr4.1:51153432-51153451 None:intergenic 45.0%
!! ACATATGAAGGTGGTGGAAG+GGG + chr4.1:51154271-51154290 MS.gene51356:intron 45.0%
!! TCTAGCCAAGGCTTTAAACG+TGG + chr4.1:51155178-51155197 MS.gene51356:intron 45.0%
!! TTTCTAGGATGCTCGATACG+TGG + chr4.1:51152294-51152313 MS.gene51356:intron 45.0%
!! AAGATATAATTTATAAAATT+TGG + chr4.1:51154188-51154207 MS.gene51356:intron 5.0%
!! AGATATAATTTATAAAATTT+GGG + chr4.1:51154189-51154208 MS.gene51356:intron 5.0%
AAAGGAGGGGCTTGAGTACT+TGG + chr4.1:51155609-51155628 MS.gene51356:CDS 50.0%
AAGGACGAAGGACGCAAACA+AGG + chr4.1:51153577-51153596 MS.gene51356:CDS 50.0%
AATGCATGGGTGTCTGTGTC+CGG + chr4.1:51155538-51155557 MS.gene51356:CDS 50.0%
AGATAGGAGAAGCCCTTGAC+AGG + chr4.1:51152434-51152453 MS.gene51356:CDS 50.0%
AGCCTAATGTGATGCTCCTC+GGG + chr4.1:51153897-51153916 MS.gene51356:intron 50.0%
CACGACACAAACACTGACAC+CGG + chr4.1:51155836-51155855 MS.gene51356:intron 50.0%
CAGACACCCATGCATTGTTG+AGG - chr4.1:51155534-51155553 None:intergenic 50.0%
CCTCGGTTACCACTTCGAAA+AGG + chr4.1:51152411-51152430 MS.gene51356:CDS 50.0%
CGCATGTATGTATGTGCACC+TGG - chr4.1:51152559-51152578 None:intergenic 50.0%
CTAGCCCCAAGGTTAAGCTT+TGG + chr4.1:51154300-51154319 MS.gene51356:CDS 50.0%
GCGGAGTTAGAAAGAGGTGA+AGG + chr4.1:51156062-51156081 MS.gene51356:CDS 50.0%
TAGTAGTAGGAGGCTGCAAG+AGG + chr4.1:51152318-51152337 MS.gene51356:CDS 50.0%
TTGCAGGCGGAGTTAGAAAG+AGG + chr4.1:51156056-51156075 MS.gene51356:intron 50.0%
! AAGGTTTGGGGTTCGAACTC+CGG + chr4.1:51152821-51152840 MS.gene51356:intron 50.0%
! CCTTTTCGAAGTGGTAACCG+AGG - chr4.1:51152414-51152433 None:intergenic 50.0%
TCATGGAGCCCCTGATACCA+TGG + chr4.1:51156286-51156305 MS.gene51356:CDS 55.0%
!! ATGAAGGTGGTGGAAGGGGA+TGG + chr4.1:51154275-51154294 MS.gene51356:intron 55.0%
!! GACCCGAGGAGCATCACATT+AGG - chr4.1:51153902-51153921 None:intergenic 55.0%
!! TGAAGGTGGTGGAAGGGGAT+GGG + chr4.1:51154276-51154295 MS.gene51356:intron 55.0%
CGGGTCCCATCATGTCCCAA+TGG + chr4.1:51153916-51153935 MS.gene51356:intron 60.0%
! TTGGGACATGATGGGACCCG+AGG - chr4.1:51153916-51153935 None:intergenic 60.0%
!! AGGGGATGGGACTAGCCCCA+AGG + chr4.1:51154289-51154308 MS.gene51356:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 51151999 51156352 51151999 ID=MS.gene51356
chr4.1 mRNA 51151999 51156352 51151999 ID=MS.gene51356.t1;Parent=MS.gene51356
chr4.1 exon 51151999 51152205 51151999 ID=MS.gene51356.t1.exon1;Parent=MS.gene51356.t1
chr4.1 CDS 51151999 51152205 51151999 ID=cds.MS.gene51356.t1;Parent=MS.gene51356.t1
chr4.1 exon 51152301 51152559 51152301 ID=MS.gene51356.t1.exon2;Parent=MS.gene51356.t1
chr4.1 CDS 51152301 51152559 51152301 ID=cds.MS.gene51356.t1;Parent=MS.gene51356.t1
chr4.1 exon 51153300 51153675 51153300 ID=MS.gene51356.t1.exon3;Parent=MS.gene51356.t1
chr4.1 CDS 51153300 51153675 51153300 ID=cds.MS.gene51356.t1;Parent=MS.gene51356.t1
chr4.1 exon 51154281 51154502 51154281 ID=MS.gene51356.t1.exon4;Parent=MS.gene51356.t1
chr4.1 CDS 51154281 51154502 51154281 ID=cds.MS.gene51356.t1;Parent=MS.gene51356.t1
chr4.1 exon 51154629 51154767 51154629 ID=MS.gene51356.t1.exon5;Parent=MS.gene51356.t1
chr4.1 CDS 51154629 51154767 51154629 ID=cds.MS.gene51356.t1;Parent=MS.gene51356.t1
chr4.1 exon 51155454 51155702 51155454 ID=MS.gene51356.t1.exon6;Parent=MS.gene51356.t1
chr4.1 CDS 51155454 51155702 51155454 ID=cds.MS.gene51356.t1;Parent=MS.gene51356.t1
chr4.1 exon 51156062 51156352 51156062 ID=MS.gene51356.t1.exon7;Parent=MS.gene51356.t1
chr4.1 CDS 51156062 51156352 51156062 ID=cds.MS.gene51356.t1;Parent=MS.gene51356.t1
Gene Sequence

>MS.gene51356

ATGTTGTTGAACTCTTCCTTTAACTCACTTCCTAGTTTCTTCAAATCTCAAGAACTAGGAAGAACTAATAATCTCAGCCATAGAAATGGTTCTCCACTTCTATGTTACGCTACTAATACAAATGTTTCTCAAAAAAGAAAATCAGCCAATTACCAACCCAATATTTGGAATTACGACATCTTACAATCTTTGAAACACGATTATGCGGTAATTCACTTTTTTTTTTGTCAAGTAGTCTAGTGGCTAAAAATTCACGTTTTCACTGTTGCTTACTCGTAATTTATATTTTGTATTATTTCTAGGATGCTCGATACGTGGATAGTAGTAGGAGGCTGCAAGAGGAAGTAAGAAGAATGATCAAGGATGAAAATGTAAACATATTAGAGTTAATCGATACTGTGAAACAATTAGGCCTCGGTTACCACTTCGAAAAGGAGATAGGAGAAGCCCTTGACAGGTTTTTATCTTTGGAAAAATGGACAAACAATAATGGCAGAAGTTTACATGAAACAGCGTTGAGATTTAGGCTCCTTCGTGAATATGGTTATGATGTTTCACCAGGTGCACATACATACATGCGTATCATTCTTAGTTTATAAAAAATGTGCATTATTCTTACCATAATAGTTGACAAAATATAGAAACGTAAATTATTCTATTCAAAAAAGTTATATTTATCAGATGTATTAATTACCTAAAAAATTACTGATTTATAATTATTATATTTTATATGAATAATAATTAGCAAGTTTCATGATATATATTTTCACGCAATAGATATCTATCGATAGCTCAGTTGGTTGGACAATGCATAAAATATGCAAGGTTTGGGGTTCGAACTCCGGCCACTACCAAAAAAAGATATATATCGATAGATTTTTTATATGATAATTAGCAAGTTTCATGATATATATGATATATATTTTCAACTTATTACAACGGGTTTTTTTTTATGCTATATATTTCCAAACTAAACGTTAATTTTGTAAAATATCTATCGAGTGAAATGTTATAAAGCATTATAACATTACCTAAATATTGTACCATTGTAGTATATGATAAACAGGTGCATCAAATATGAACCACTAAAAAAGATTTTTAAGGTAGACACTTTACAATTTTATTAGGACCCAATTTTGAAGATTCGTATAGAATTTCCATTTTTAGTTTCAGAAAGCTATGTTAAACAATCTCTAAACTATTGAATTACATCAAGACTAAAATTGTATGATAAATATGATGAAGATGTTTTTCTATATGATTAGGACCACAATGATGAAGATCTTTTTTTGTATATACAGATATTTTTGAGATGTTTAAGGACCACAATGAAAATTTTAAGGCATGTCTTGTCCAAGATATCAAAGGAATGTTAAGTCTCTACGAGGCATCATTTCTATCTTATGAAGGAGAGCAAATTTTGGATGAAGCCAATGCTTTCACTAGCATCCACCTCAAAGAACTTAGTGAAGGTAGAAGCAGTATCCTCTTTGATCAAGTGAATCATTCATTGGAGCTTCCACTACATCGTAGAGTCCAAAGTCTTGAAGCTCGATGGTATATTGATTCATATGAAAAAAGGACGAAGGACGCAAACAAGGTCTTGCTTGAAGCAGCCAAATTGAATTTCAACATTGTGCAATCAACTCTTCAACAGGATCTTAAAGAAACGTCAAGGTAAAGATTTCGAGTTGAGAATGATTTCGAGTTGAGAATGATTTCATTTTGTTGGGTCATAAAGAAAGTTTAGTTGATCATCAAATTAGATCTTGGGAGTTGAATAATATCTTAATTCAAAACCTTAAGACATTATAGTTTTGAGTTTTTCCATTTATATAGTGTCCAACATCCAATTTTTCCATCTAATATAAGACCCTTTCACTTGTGTGGTTATTTAAAGCCTAATGTGATGCTCCTCGGGTCCCATCATGTCCCAATGGAGTTATGGTTTGGGAATGAAGTCGTGATCGGGAGCCACGATTCACCTCAAATTTGTAAATGAAATAATAAATGCAATAATTAGTAAATACAATAAAAAATTGTATTGATTTAATTTTTTTAAACAACAAAAGTCTCAAATGATATACAACAAGCGTCTCATCCATATGTTTTTTTTAGCAATATCAAATAAAAACTCATACATTATCCTTTTTTCTACCCTATTATACCAATTGTATAGCTTATAAAAAAAGATATAATTTATAAAATTTGGGTTTAATTTCATTTTTAGACTATTTTTTTTTTAATAAGAAAGAATTCATATTTTTCTTTTACATATGAAGGTGGTGGAAGGGGATGGGACTAGCCCCAAGGTTAAGCTTTGGTCGTGATAGGCTAATGGAATGTTTCTTTTGGGCTGCTGGAATGACACCATTTGAGCCTCAGTTTAGTGATATGCGCAAGGGTTTAACCAAAGTGTGCTCTCTAATTACTTTAATTGATGACATTTATGATGTTTATGGCACCTTGGATGAATTAGAGCTTTTTACAACGGCAGTAGAAAGGTAAATATTTTTTTTTTTTTTTTGGTTACAAGAAAGGTAAATAAATTTGATCACACTATTGCAAATTTAGAGAGAAAATTGTTGTTAATTACGTAGTTTACTAATAGAAAATTATGTTTCTTTCAGATGGGATATTAATGCAATTCAAATTCTTCCGGAGTATATGAAGATATTCTTCTTGGCACTTTACAACACTGTCAATGATTTAACATATGACACACTTAAAGAAACAGGACATGACATTCTTCCCTACCTTGTCAAAGCGGTATGACCAAACTCACATAAAAACCACGTTCACAAAATGGTTAGAACATCCTTAAAAAAAACAAAAATTGGTTAAGAACATGCTTAGAACATGTCTTAGGGAATTAAATTTTGAGCAAAACTAAGGGTTGTTAAAAAAAACATTTAATACATGAGCAAAATTTGTATATTCACAGGGCTAAATAATTTAGATTTAGGTACACATGGTTGATATATATTTTTCATTAATTTTTCTAGCCAAGACTTTAAACGCGGTTTTTTTAACCTTTTTTTTTTAACATATACCTCAAATCAGTTGAGCTACACAGACCCACCAAATTTTAGACTTTATTAGGGCGCATGTTCGAAGTCACAATTTCCGGTTCTTAACAACTAAATTATATGTTATAAAATTAATTTTTATTGAATTTTTCTAGCCAAGGCTTTAAACGTGGTTTTTTTTAACTCTGTTTTTTTTTAACATATATCTCAAATTAGCTTTGGTGAAAAAAAATATATCTCAAATTAGCAGAGCTATACAAACCCTCCAATTTTTTCTCTAAAAAAAAAATCCAAATTTTATCTATTCAACTGTTGATAGCTATGCCATAATATATTTATGATCACACTATCTCTCAATTAGACAATTAATACAAACTTCACTACTTGTACTAATAATTTTCATTTGCTTTTTCAAATATATTACAGTGGTCTGATATGTTGAAGGCATTCCTACAAGAAGCAAGATGGTGTCACAACAAACACATGCCAAAATTTGATGACTACCTCAACAATGCATGGGTGTCTGTGTCCGGTGTAGTTTTAATGACCCATTCCTATTTTTTGCTAAATCGTAACATAACAAAGGAGGGGCTTGAGTACTTGGAAAATTGTACTATATTGTTGCAGAGACCGTCCATAATTTTTCGACTTTGCAATGATTTGGCTACTTCATCGGTAAGTAATTTGTGCCTTACCTTAACCATACATGCATATTATCATATCATAATACTAGAAAAACTAACTAAGAAAATAGAAGACTTAAGTGAGTCCAAAAAAAAGTTGCACATCAATAAATCACGGATACAGACACGACACAAACACTGACACCGGTACAGTTAATAATTTTAAAAAATCACATTATTCAGTGTAATTACAAGTGTCGATGTTAGACACAACACATATCAAACACCGGAACACGTTTAATCCGATGAGTGTCCGTGCTTCATAGTCGCACATTTAAGGTGCACATTTCAACTCAATTATAAGGAGCATCCGAGTACTCAATCCAATTGATTTGTTATATAATTTTGCAGGCGGAGTTAGAAAGAGGTGAAGGAGCTAATTCAATTATATGCTACATGAATGAAAATGGTGTTAGTGAGGAGGTTGCTTACAAACACATCCAAAATTTGCTTAATGAAAATTGGAAGAAGATGAACAAAGATCGAGTTATCAATTCACCTTCCTCAAAATATTTTTCAGAGACAATAATCAACCTTGCTAGAATTTCTCACTGCACGTACCAATATGGAGATGGTCATGGAGCCCCTGATACCATGGCAAAGAATCGAATAAAGGCATTAATACTTGAACCAATTAATTAA
Protein sequence

>MS.gene51356.t1

MLLNSSFNSLPSFFKSQELGRTNNLSHRNGSPLLCYATNTNVSQKRKSANYQPNIWNYDILQSLKHDYADARYVDSSRRLQEEVRRMIKDENVNILELIDTVKQLGLGYHFEKEIGEALDRFLSLEKWTNNNGRSLHETALRFRLLREYGYDVSPDIFEMFKDHNENFKACLVQDIKGMLSLYEASFLSYEGEQILDEANAFTSIHLKELSEGRSSILFDQVNHSLELPLHRRVQSLEARWYIDSYEKRTKDANKVLLEAAKLNFNIVQSTLQQDLKETSRWWKGMGLAPRLSFGRDRLMECFFWAAGMTPFEPQFSDMRKGLTKVCSLITLIDDIYDVYGTLDELELFTTAVERWDINAIQILPEYMKIFFLALYNTVNDLTYDTLKETGHDILPYLVKAWSDMLKAFLQEARWCHNKHMPKFDDYLNNAWVSVSGVVLMTHSYFLLNRNITKEGLEYLENCTILLQRPSIIFRLCNDLATSSAELERGEGANSIICYMNENGVSEEVAYKHIQNLLNENWKKMNKDRVINSPSSKYFSETIINLARISHCTYQYGDGHGAPDTMAKNRIKALILEPIN