Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51357.t1 | NP_001363155.1 | 92.9 | 580 | 41 | 0 | 1 | 580 | 1 | 580 | 0.00E+00 | 1105.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51357.t1 | Q5UB07 | 92.8 | 580 | 42 | 0 | 1 | 580 | 1 | 580 | 0.0e+00 | 1103.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51357.t1 | A0A072UIS6 | 92.9 | 580 | 41 | 0 | 1 | 580 | 1 | 580 | 0.0e+00 | 1105.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052346 | MS.gene51357 | 0.801437 | 9.01E-49 | -1.69E-46 |
MS.gene053552 | MS.gene51357 | 0.815703 | 8.07E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51357.t1 | MTR_4g045810 | 92.931 | 580 | 41 | 0 | 1 | 580 | 1 | 580 | 0.0 | 1128 |
MS.gene51357.t1 | MTR_2g064425 | 48.059 | 541 | 270 | 7 | 43 | 579 | 51 | 584 | 9.30e-168 | 490 |
MS.gene51357.t1 | MTR_2g065450 | 46.197 | 539 | 278 | 7 | 45 | 579 | 58 | 588 | 3.48e-162 | 475 |
MS.gene51357.t1 | MTR_2g064425 | 46.211 | 541 | 265 | 8 | 43 | 579 | 51 | 569 | 1.26e-155 | 458 |
MS.gene51357.t1 | MTR_8g057020 | 41.766 | 589 | 320 | 11 | 7 | 579 | 6 | 587 | 1.20e-148 | 441 |
MS.gene51357.t1 | MTR_7g010710 | 40.511 | 548 | 314 | 7 | 38 | 578 | 10 | 552 | 1.20e-130 | 393 |
MS.gene51357.t1 | MTR_4g081460 | 37.117 | 555 | 340 | 6 | 31 | 578 | 7 | 559 | 3.16e-121 | 369 |
MS.gene51357.t1 | MTR_2g089130 | 39.757 | 493 | 281 | 5 | 73 | 558 | 60 | 543 | 1.26e-115 | 355 |
MS.gene51357.t1 | MTR_2g089120 | 40.381 | 473 | 269 | 6 | 89 | 558 | 82 | 544 | 1.75e-115 | 355 |
MS.gene51357.t1 | MTR_2g064425 | 51.233 | 365 | 168 | 6 | 43 | 403 | 51 | 409 | 5.44e-114 | 347 |
MS.gene51357.t1 | MTR_6g039440 | 33.883 | 546 | 356 | 3 | 38 | 579 | 7 | 551 | 1.45e-113 | 349 |
MS.gene51357.t1 | MTR_6g008560 | 34.743 | 544 | 343 | 4 | 44 | 579 | 16 | 555 | 3.30e-111 | 343 |
MS.gene51357.t1 | MTR_4g048460 | 36.414 | 541 | 335 | 6 | 45 | 579 | 22 | 559 | 1.56e-109 | 339 |
MS.gene51357.t1 | MTR_2g082010 | 36.528 | 553 | 324 | 13 | 44 | 580 | 26 | 567 | 5.34e-107 | 333 |
MS.gene51357.t1 | MTR_5g062230 | 33.333 | 546 | 359 | 3 | 38 | 579 | 7 | 551 | 1.13e-106 | 332 |
MS.gene51357.t1 | MTR_3g464190 | 34.750 | 541 | 347 | 4 | 44 | 579 | 16 | 555 | 2.19e-102 | 320 |
MS.gene51357.t1 | MTR_2g064425 | 48.493 | 365 | 163 | 7 | 43 | 403 | 51 | 394 | 5.21e-102 | 315 |
MS.gene51357.t1 | MTR_5g094620 | 32.778 | 540 | 339 | 4 | 44 | 579 | 16 | 535 | 1.40e-101 | 318 |
MS.gene51357.t1 | MTR_8g007515 | 36.182 | 550 | 328 | 9 | 45 | 579 | 13 | 554 | 9.36e-101 | 317 |
MS.gene51357.t1 | MTR_2g081980 | 35.818 | 550 | 334 | 13 | 44 | 580 | 13 | 556 | 4.24e-99 | 312 |
MS.gene51357.t1 | MTR_5g073260 | 34.791 | 549 | 337 | 7 | 44 | 579 | 10 | 550 | 1.20e-98 | 311 |
MS.gene51357.t1 | MTR_5g073200 | 34.566 | 541 | 348 | 4 | 44 | 579 | 8 | 547 | 3.15e-96 | 304 |
MS.gene51357.t1 | MTR_4g092010 | 35.060 | 502 | 296 | 10 | 75 | 560 | 54 | 541 | 4.21e-95 | 302 |
MS.gene51357.t1 | MTR_2g082060 | 35.315 | 555 | 317 | 13 | 44 | 579 | 20 | 551 | 4.70e-94 | 299 |
MS.gene51357.t1 | MTR_4g048460 | 38.427 | 445 | 265 | 6 | 45 | 483 | 22 | 463 | 1.63e-93 | 295 |
MS.gene51357.t1 | MTR_6g008560 | 36.250 | 400 | 254 | 1 | 180 | 579 | 1 | 399 | 3.26e-87 | 276 |
MS.gene51357.t1 | MTR_4g019550 | 33.746 | 566 | 318 | 17 | 44 | 580 | 20 | 557 | 1.39e-81 | 266 |
MS.gene51357.t1 | MTR_4g092020 | 34.440 | 482 | 304 | 7 | 85 | 560 | 77 | 552 | 6.80e-81 | 265 |
MS.gene51357.t1 | MTR_2g010960 | 33.598 | 503 | 315 | 11 | 69 | 556 | 2 | 500 | 2.22e-79 | 259 |
MS.gene51357.t1 | MTR_3g063170 | 33.803 | 497 | 317 | 10 | 69 | 556 | 2 | 495 | 3.33e-77 | 254 |
MS.gene51357.t1 | MTR_3g465090 | 33.533 | 501 | 313 | 11 | 69 | 556 | 2 | 495 | 3.95e-76 | 251 |
MS.gene51357.t1 | MTR_6g064980 | 33.199 | 497 | 320 | 10 | 69 | 556 | 2 | 495 | 4.35e-76 | 251 |
MS.gene51357.t1 | MTR_3g063120 | 34.746 | 472 | 290 | 10 | 97 | 556 | 6 | 471 | 7.70e-76 | 249 |
MS.gene51357.t1 | MTR_3g063140 | 32.998 | 497 | 321 | 10 | 69 | 556 | 2 | 495 | 1.01e-75 | 250 |
MS.gene51357.t1 | MTR_3g052120 | 32.432 | 518 | 332 | 12 | 69 | 575 | 2 | 512 | 7.75e-72 | 239 |
MS.gene51357.t1 | MTR_2g082050 | 31.845 | 515 | 282 | 10 | 75 | 580 | 4 | 458 | 4.08e-71 | 236 |
MS.gene51357.t1 | MTR_6g065040 | 35.732 | 403 | 242 | 9 | 161 | 556 | 1 | 393 | 1.30e-66 | 222 |
MS.gene51357.t1 | MTR_5g081730 | 81.818 | 110 | 15 | 1 | 177 | 281 | 2 | 111 | 2.78e-53 | 178 |
MS.gene51357.t1 | MTR_2g012870 | 32.192 | 438 | 264 | 15 | 89 | 503 | 249 | 676 | 1.68e-42 | 163 |
MS.gene51357.t1 | MTR_2g064295 | 29.493 | 434 | 278 | 12 | 95 | 505 | 257 | 685 | 2.12e-41 | 160 |
MS.gene51357.t1 | MTR_3g058160 | 28.947 | 456 | 285 | 14 | 95 | 521 | 66 | 511 | 1.46e-40 | 155 |
MS.gene51357.t1 | MTR_3g058160 | 28.947 | 456 | 285 | 14 | 95 | 521 | 257 | 702 | 5.82e-40 | 155 |
MS.gene51357.t1 | MTR_3g058160 | 28.947 | 456 | 285 | 14 | 95 | 521 | 270 | 715 | 6.01e-40 | 155 |
MS.gene51357.t1 | MTR_3g058160 | 28.947 | 456 | 285 | 14 | 95 | 521 | 277 | 722 | 7.09e-40 | 155 |
MS.gene51357.t1 | MTR_2g012900 | 30.396 | 454 | 265 | 14 | 89 | 503 | 249 | 690 | 1.22e-39 | 155 |
MS.gene51357.t1 | MTR_3g058160 | 27.044 | 477 | 288 | 14 | 95 | 521 | 277 | 743 | 2.06e-36 | 145 |
MS.gene51357.t1 | MTR_3g063160 | 33.103 | 290 | 186 | 7 | 69 | 353 | 2 | 288 | 1.60e-33 | 129 |
MS.gene51357.t1 | MTR_7g011663 | 27.887 | 355 | 214 | 10 | 97 | 416 | 349 | 696 | 7.14e-27 | 116 |
MS.gene51357.t1 | MTR_7g050990 | 40.000 | 145 | 77 | 1 | 225 | 369 | 29 | 163 | 3.55e-26 | 114 |
MS.gene51357.t1 | MTR_5g094530 | 31.132 | 212 | 105 | 4 | 193 | 400 | 4 | 178 | 5.91e-23 | 97.1 |
MS.gene51357.t1 | MTR_7g094970 | 27.636 | 275 | 158 | 9 | 97 | 338 | 211 | 477 | 4.74e-22 | 100 |
MS.gene51357.t1 | MTR_7g011770 | 26.050 | 357 | 218 | 12 | 97 | 416 | 245 | 592 | 1.80e-20 | 96.3 |
MS.gene51357.t1 | MTR_5g030050 | 27.612 | 268 | 148 | 10 | 97 | 334 | 3 | 254 | 7.56e-20 | 90.9 |
MS.gene51357.t1 | MTR_7g057340 | 24.706 | 170 | 128 | 0 | 410 | 579 | 1 | 170 | 1.94e-15 | 74.7 |
MS.gene51357.t1 | MTR_7g057390 | 23.529 | 170 | 127 | 1 | 410 | 579 | 1 | 167 | 5.24e-14 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51357.t1 | AT3G25830 | 42.182 | 550 | 299 | 10 | 45 | 579 | 47 | 592 | 2.18e-148 | 441 |
MS.gene51357.t1 | AT3G25820 | 42.182 | 550 | 299 | 10 | 45 | 579 | 47 | 592 | 2.18e-148 | 441 |
MS.gene51357.t1 | AT3G25810 | 42.419 | 554 | 297 | 10 | 44 | 579 | 46 | 595 | 1.51e-144 | 431 |
MS.gene51357.t1 | AT2G24210 | 41.304 | 552 | 300 | 11 | 44 | 579 | 45 | 588 | 8.25e-143 | 426 |
MS.gene51357.t1 | AT4G16740 | 41.530 | 549 | 295 | 10 | 45 | 579 | 26 | 562 | 5.29e-140 | 418 |
MS.gene51357.t1 | AT4G16730 | 38.060 | 536 | 313 | 8 | 60 | 579 | 5 | 537 | 9.05e-132 | 396 |
MS.gene51357.t1 | AT4G16730 | 39.474 | 494 | 285 | 6 | 97 | 579 | 1 | 491 | 1.55e-129 | 389 |
MS.gene51357.t1 | AT3G25820 | 43.947 | 380 | 199 | 7 | 45 | 414 | 47 | 422 | 2.17e-99 | 309 |
MS.gene51357.t1 | AT4G16740 | 44.262 | 366 | 185 | 6 | 45 | 398 | 26 | 384 | 3.72e-94 | 294 |
MS.gene51357.t1 | AT5G23960 | 31.919 | 542 | 357 | 6 | 45 | 579 | 7 | 543 | 2.39e-89 | 286 |
MS.gene51357.t1 | AT5G23960 | 31.801 | 544 | 357 | 8 | 45 | 579 | 7 | 545 | 1.93e-87 | 281 |
MS.gene51357.t1 | AT1G70080 | 31.448 | 601 | 367 | 13 | 2 | 580 | 33 | 610 | 1.61e-86 | 281 |
MS.gene51357.t1 | AT1G61680 | 32.917 | 480 | 311 | 5 | 95 | 569 | 94 | 567 | 1.28e-84 | 275 |
MS.gene51357.t1 | AT3G29410 | 31.828 | 487 | 327 | 4 | 95 | 579 | 13 | 496 | 1.62e-83 | 270 |
MS.gene51357.t1 | AT3G29410 | 31.828 | 487 | 327 | 4 | 95 | 579 | 118 | 601 | 1.99e-82 | 270 |
MS.gene51357.t1 | AT1G61680 | 32.292 | 480 | 307 | 6 | 95 | 569 | 94 | 560 | 2.86e-81 | 266 |
MS.gene51357.t1 | AT4G16740 | 42.442 | 344 | 179 | 6 | 45 | 376 | 26 | 362 | 3.13e-79 | 254 |
MS.gene51357.t1 | AT4G16740 | 42.442 | 344 | 179 | 6 | 45 | 376 | 26 | 362 | 3.13e-79 | 254 |
MS.gene51357.t1 | AT1G31950 | 29.455 | 550 | 367 | 8 | 43 | 579 | 63 | 604 | 5.99e-78 | 258 |
MS.gene51357.t1 | AT3G25820 | 43.614 | 321 | 167 | 7 | 45 | 355 | 47 | 363 | 7.80e-78 | 251 |
MS.gene51357.t1 | AT3G25820 | 43.614 | 321 | 167 | 7 | 45 | 355 | 47 | 363 | 7.80e-78 | 251 |
MS.gene51357.t1 | AT1G31950 | 30.957 | 491 | 329 | 5 | 95 | 579 | 119 | 605 | 1.21e-77 | 257 |
MS.gene51357.t1 | AT3G14540 | 29.573 | 585 | 381 | 12 | 16 | 579 | 25 | 599 | 1.12e-76 | 254 |
MS.gene51357.t1 | AT3G14520 | 29.144 | 549 | 366 | 9 | 45 | 579 | 63 | 602 | 1.17e-75 | 252 |
MS.gene51357.t1 | AT3G14490 | 30.324 | 587 | 383 | 13 | 11 | 579 | 21 | 599 | 1.72e-75 | 251 |
MS.gene51357.t1 | AT1G33750 | 29.412 | 578 | 393 | 7 | 12 | 579 | 29 | 601 | 3.26e-75 | 251 |
MS.gene51357.t1 | AT5G44630 | 32.207 | 503 | 320 | 8 | 88 | 579 | 63 | 555 | 7.03e-74 | 246 |
MS.gene51357.t1 | AT4G15870 | 30.241 | 582 | 375 | 13 | 10 | 579 | 34 | 596 | 1.72e-73 | 246 |
MS.gene51357.t1 | AT4G20230 | 30.538 | 465 | 316 | 5 | 104 | 564 | 126 | 587 | 1.54e-66 | 228 |
MS.gene51357.t1 | AT4G20230 | 30.538 | 465 | 316 | 5 | 104 | 564 | 138 | 599 | 2.00e-66 | 228 |
MS.gene51357.t1 | AT4G20210 | 30.090 | 555 | 358 | 13 | 43 | 579 | 56 | 598 | 4.66e-65 | 223 |
MS.gene51357.t1 | AT3G32030 | 27.555 | 548 | 380 | 8 | 43 | 579 | 61 | 602 | 6.07e-65 | 223 |
MS.gene51357.t1 | AT1G48800 | 30.249 | 562 | 357 | 14 | 37 | 577 | 55 | 602 | 1.52e-64 | 222 |
MS.gene51357.t1 | AT4G13300 | 29.767 | 514 | 343 | 10 | 79 | 580 | 46 | 553 | 1.97e-63 | 218 |
MS.gene51357.t1 | AT3G29190 | 28.687 | 495 | 346 | 5 | 89 | 579 | 108 | 599 | 3.10e-63 | 219 |
MS.gene51357.t1 | AT4G20200 | 29.800 | 500 | 336 | 7 | 89 | 580 | 111 | 603 | 4.95e-63 | 218 |
MS.gene51357.t1 | AT1G31950 | 28.508 | 449 | 308 | 5 | 43 | 482 | 63 | 507 | 1.52e-62 | 215 |
MS.gene51357.t1 | AT3G14540 | 29.630 | 486 | 314 | 10 | 16 | 482 | 25 | 501 | 4.12e-62 | 213 |
MS.gene51357.t1 | AT1G48820 | 30.182 | 550 | 315 | 17 | 45 | 577 | 63 | 560 | 9.88e-60 | 208 |
MS.gene51357.t1 | AT4G13280 | 29.228 | 479 | 328 | 7 | 107 | 579 | 79 | 552 | 2.28e-59 | 207 |
MS.gene51357.t1 | AT2G23230 | 29.045 | 513 | 350 | 8 | 79 | 580 | 90 | 599 | 7.72e-59 | 207 |
MS.gene51357.t1 | AT2G23230 | 29.297 | 512 | 345 | 9 | 79 | 580 | 90 | 594 | 6.91e-58 | 204 |
MS.gene51357.t1 | AT1G66020 | 28.974 | 497 | 344 | 6 | 89 | 580 | 105 | 597 | 4.97e-57 | 202 |
MS.gene51357.t1 | AT3G29110 | 28.542 | 480 | 336 | 5 | 104 | 579 | 119 | 595 | 2.90e-54 | 194 |
MS.gene51357.t1 | AT4G13280 | 28.601 | 479 | 301 | 9 | 107 | 579 | 79 | 522 | 2.15e-50 | 182 |
MS.gene51357.t1 | AT5G48110 | 30.530 | 321 | 218 | 5 | 240 | 559 | 2 | 318 | 4.74e-44 | 160 |
MS.gene51357.t1 | AT1G79460 | 28.599 | 514 | 329 | 19 | 95 | 580 | 275 | 778 | 2.98e-41 | 159 |
MS.gene51357.t1 | AT1G66020 | 34.843 | 287 | 178 | 6 | 89 | 370 | 105 | 387 | 1.88e-38 | 147 |
MS.gene51357.t1 | AT1G61120 | 26.996 | 526 | 328 | 18 | 89 | 580 | 280 | 783 | 6.91e-37 | 147 |
MS.gene51357.t1 | AT4G02780 | 31.852 | 270 | 143 | 10 | 97 | 333 | 334 | 595 | 6.75e-23 | 103 |
Find 119 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAATTACCAACCCAATATT+TGG | 0.147243 | 4.1:+51219585 | MS.gene51357:CDS |
CCAAATATTGGGTTGGTAAT+TGG | 0.157698 | 4.1:-51219585 | None:intergenic |
GATGACATTTATGATGTTTA+TGG | 0.162881 | 4.1:+51227986 | MS.gene51357:CDS |
ATGAAACTGCCTTAAGATTT+AGG | 0.186680 | 4.1:+51219942 | MS.gene51357:CDS |
AAAATTTGCTTAATGAAAAT+TGG | 0.190627 | 4.1:+51229843 | MS.gene51357:CDS |
AATTGTTTGAATTAATTAAT+TGG | 0.198474 | 4.1:-51230031 | None:intergenic |
CGATTCTTTGCCATGGTATC+AGG | 0.198740 | 4.1:-51229986 | None:intergenic |
TTGAGGTAGTCATCAAATTT+TGG | 0.199877 | 4.1:-51229070 | None:intergenic |
GATATCGTAATTCCAAATAT+TGG | 0.205792 | 4.1:-51219597 | None:intergenic |
TTATGAAGGAGAACAAATTT+TGG | 0.215009 | 4.1:+51226950 | MS.gene51357:CDS |
CACAATGTTGAAATTCAATT+TGG | 0.223651 | 4.1:-51227162 | None:intergenic |
TTTAGGCTCCTTCGAGAATA+TGG | 0.253661 | 4.1:+51219959 | MS.gene51357:CDS |
GGCTAATGGAATGTTTCTTT+TGG | 0.253920 | 4.1:+51227879 | MS.gene51357:CDS |
TTAACATTCCTTTGATATCT+TGG | 0.275349 | 4.1:-51226902 | None:intergenic |
GGAAGTAAGAAGAATGATTA+AGG | 0.279467 | 4.1:+51219772 | MS.gene51357:CDS |
GAAACTAGGAAGTGAGATAA+AGG | 0.316990 | 4.1:-51219459 | None:intergenic |
ATATCGTAATTCCAAATATT+GGG | 0.331518 | 4.1:-51219596 | None:intergenic |
GTATATGAAGATATTCTTCT+TGG | 0.341174 | 4.1:+51228208 | MS.gene51357:CDS |
TATTAGTAGCGTAACATAGA+AGG | 0.343134 | 4.1:-51219538 | None:intergenic |
TAATGCAATTCAAATTCTTC+CGG | 0.348756 | 4.1:+51228184 | MS.gene51357:CDS |
TGAACAAGTGAATCATTCAT+TGG | 0.368214 | 4.1:+51227040 | MS.gene51357:CDS |
ATATGCTACATGAATGAAAA+TGG | 0.368865 | 4.1:+51229788 | MS.gene51357:CDS |
AAAGGAGGGGCTTGAGTACT+TGG | 0.380341 | 4.1:+51229165 | MS.gene51357:CDS |
CTCCATGACCATCTCCATAT+TGG | 0.381267 | 4.1:-51229961 | None:intergenic |
TACCCTCACTAAGGTCTTTG+AGG | 0.382016 | 4.1:-51227001 | None:intergenic |
TCTCACTGCACGTACCAATA+TGG | 0.388938 | 4.1:+51229947 | MS.gene51357:CDS |
AGATAGGAGAAGCCCTTGAT+AGG | 0.389678 | 4.1:+51219867 | MS.gene51357:CDS |
AGTAATTAGAGAGGAAACTT+TGG | 0.396071 | 4.1:-51227957 | None:intergenic |
CATGGCAAAGAATCGAATAA+AGG | 0.400991 | 4.1:+51229994 | MS.gene51357:CDS |
GACACCATCTTGCTTCTTGT+AGG | 0.401277 | 4.1:-51229033 | None:intergenic |
ACCATCGAGTTTCAAGACTT+TGG | 0.414873 | 4.1:-51227085 | None:intergenic |
AATAATCTCAGTCATAGAAA+TGG | 0.414910 | 4.1:+51219509 | MS.gene51357:CDS |
TATGACACACTTAAAGAAAC+AGG | 0.415257 | 4.1:+51228260 | MS.gene51357:CDS |
CACGACCAAAGCTTAACCTT+GGG | 0.417065 | 4.1:-51227853 | None:intergenic |
ACATATGAAGGTGGTGGAAG+GGG | 0.417594 | 4.1:+51227819 | MS.gene51357:intron |
GGTTAAGCTTTGGTCGTGAT+AGG | 0.419053 | 4.1:+51227858 | MS.gene51357:CDS |
GATGGTCTCTTCAACAATAT+AGG | 0.422197 | 4.1:-51229196 | None:intergenic |
CTTTGGTCGTGATAGGCTAA+TGG | 0.425070 | 4.1:+51227865 | MS.gene51357:CDS |
TACCGCATAATCGTGTTTCA+AGG | 0.426734 | 4.1:-51219627 | None:intergenic |
TCGAAGGAGCCTAAATCTTA+AGG | 0.435366 | 4.1:-51219951 | None:intergenic |
TATCAATTCGAAAAGGAGAT+AGG | 0.437146 | 4.1:+51219851 | MS.gene51357:CDS |
TCACTAAACTGAGGCTCAAA+TGG | 0.444620 | 4.1:-51227917 | None:intergenic |
TGTGCAATCAACTCTTCAAC+AGG | 0.451044 | 4.1:+51227181 | MS.gene51357:CDS |
ATGAAGGTGGTGGAAGGGGA+TGG | 0.461912 | 4.1:+51227823 | MS.gene51357:intron |
CAATGATTTGGCTACTTCAT+CGG | 0.474012 | 4.1:+51229237 | MS.gene51357:CDS |
CTAGCCCCAAGGTTAAGCTT+TGG | 0.484468 | 4.1:+51227848 | MS.gene51357:CDS |
TTCTTCAAACCTCAAGAACT+AGG | 0.500687 | 4.1:+51219479 | MS.gene51357:CDS |
GATTCTTTGCCATGGTATCA+GGG | 0.502496 | 4.1:-51229985 | None:intergenic |
TGAAGGTGGTGGAAGGGGAT+GGG | 0.505139 | 4.1:+51227824 | MS.gene51357:intron |
AATGCATGGGTGTCTGTCTC+CGG | 0.505741 | 4.1:+51229094 | MS.gene51357:CDS |
TTAGTTCTTCCTAGTTCTTG+AGG | 0.509931 | 4.1:-51219488 | None:intergenic |
AATGATTCACTTGTTCAAAG+AGG | 0.522078 | 4.1:-51227034 | None:intergenic |
GCATCGTTTCTATCTTATGA+AGG | 0.522760 | 4.1:+51226936 | MS.gene51357:CDS |
CTTTATTCGATTCTTTGCCA+TGG | 0.524173 | 4.1:-51229993 | None:intergenic |
TCTTGAGGTTTGAAGAAACT+AGG | 0.526566 | 4.1:-51219473 | None:intergenic |
TCTTTACAACGGCAGTAGAA+AGG | 0.527441 | 4.1:+51228029 | MS.gene51357:CDS |
CGTAATTCCAAATATTGGGT+TGG | 0.529017 | 4.1:-51219592 | None:intergenic |
TTGCAGGCGGAGTTAGAAAG+AGG | 0.529922 | 4.1:+51229746 | MS.gene51357:intron |
CCTCAGTTATCAATTCGAAA+AGG | 0.535490 | 4.1:+51219844 | MS.gene51357:CDS |
ATTAGTAGCGTAACATAGAA+GGG | 0.536999 | 4.1:-51219537 | None:intergenic |
TACATATGAAGGTGGTGGAA+GGG | 0.538647 | 4.1:+51227818 | MS.gene51357:intron |
AAGGTCTTTGAGGTGGATGC+TGG | 0.539269 | 4.1:-51226991 | None:intergenic |
AAGGAAGAGTTCAACAACAT+TGG | 0.542776 | 4.1:-51219440 | None:intergenic |
TCACGACCAAAGCTTAACCT+TGG | 0.543926 | 4.1:-51227854 | None:intergenic |
AAGAATATCTTCATATACTC+CGG | 0.545115 | 4.1:-51228203 | None:intergenic |
TTACATATGAAGGTGGTGGA+AGG | 0.555487 | 4.1:+51227817 | MS.gene51357:intron |
TATGGTTATGATGTTTCACC+AGG | 0.556636 | 4.1:+51219977 | MS.gene51357:CDS |
CTCGATACGTGGATAGGAGT+AGG | 0.559477 | 4.1:+51219738 | MS.gene51357:CDS |
TCATGGAGCCCCTGATACCA+TGG | 0.560232 | 4.1:+51229976 | MS.gene51357:CDS |
CATTCCTACAAGAAGCAAGA+TGG | 0.565878 | 4.1:+51229029 | MS.gene51357:CDS |
TAGGAGTAGGAGGATGCAAG+AGG | 0.567410 | 4.1:+51219751 | MS.gene51357:CDS |
CTTTGGACTCTACGATGTAG+TGG | 0.570277 | 4.1:-51227068 | None:intergenic |
ATGACTACCTCAACAATGCA+TGG | 0.572804 | 4.1:+51229080 | MS.gene51357:CDS |
TCCAAAGTCTTGAAACTCGA+TGG | 0.575055 | 4.1:+51227084 | MS.gene51357:CDS |
TACTGCTTCTACCCTCACTA+AGG | 0.582622 | 4.1:-51227010 | None:intergenic |
AATCGTAACATAACAAAGGA+GGG | 0.583261 | 4.1:+51229151 | MS.gene51357:CDS |
ATCAATTAAAGTAATTAGAG+AGG | 0.584274 | 4.1:-51227966 | None:intergenic |
CAGTTTAGTGATATCCGCAA+GGG | 0.586945 | 4.1:+51227929 | MS.gene51357:CDS |
AGGATGCTCGATACGTGGAT+AGG | 0.588378 | 4.1:+51219732 | MS.gene51357:intron |
ATCCTTGAAACACGATTATG+CGG | 0.595568 | 4.1:+51219625 | MS.gene51357:CDS |
GCGGAGTTAGAAAGAGGTGA+AGG | 0.597815 | 4.1:+51229752 | MS.gene51357:CDS |
TTATGATGTTTATGGCACCT+TGG | 0.599831 | 4.1:+51227994 | MS.gene51357:CDS |
TCATACCGCTTTGACAAGGT+AGG | 0.603491 | 4.1:-51228297 | None:intergenic |
ATCGTAACATAACAAAGGAG+GGG | 0.606500 | 4.1:+51229152 | MS.gene51357:CDS |
GCTAAATCGTAACATAACAA+AGG | 0.606945 | 4.1:+51229147 | MS.gene51357:CDS |
ATTCTTTGCCATGGTATCAG+GGG | 0.608231 | 4.1:-51229984 | None:intergenic |
AAATCGTAACATAACAAAGG+AGG | 0.612370 | 4.1:+51229150 | MS.gene51357:CDS |
CATACCGCTTTGACAAGGTA+GGG | 0.613885 | 4.1:-51228296 | None:intergenic |
TCAGTTTAGTGATATCCGCA+AGG | 0.615276 | 4.1:+51227928 | MS.gene51357:CDS |
GTGGATGCTGGTGAAAGCAT+TGG | 0.617344 | 4.1:-51226979 | None:intergenic |
TGTCTTGTCCAAGATATCAA+AGG | 0.617651 | 4.1:+51226894 | MS.gene51357:CDS |
CATCATAACCATATTCTCGA+AGG | 0.619092 | 4.1:-51219967 | None:intergenic |
TTTCTAGGATGCTCGATACG+TGG | 0.619384 | 4.1:+51219727 | MS.gene51357:intron |
AAACTTTGGTTAAACCCTTG+CGG | 0.620282 | 4.1:-51227943 | None:intergenic |
TACCAATATGGAGATGGTCA+TGG | 0.623302 | 4.1:+51229959 | MS.gene51357:CDS |
AGGGGATGGGACTAGCCCCA+AGG | 0.624304 | 4.1:+51227837 | MS.gene51357:CDS |
CCTCACTAAGGTCTTTGAGG+TGG | 0.624819 | 4.1:-51226998 | None:intergenic |
TGCACGTACCAATATGGAGA+TGG | 0.629166 | 4.1:+51229953 | MS.gene51357:CDS |
AAAGAGCTCTAATTCATCCA+AGG | 0.630021 | 4.1:-51228011 | None:intergenic |
GAATGAAAATGGTGTTAGTG+AGG | 0.637998 | 4.1:+51229799 | MS.gene51357:CDS |
TCTTCCCTACCTTGTCAAAG+CGG | 0.642377 | 4.1:+51228292 | MS.gene51357:CDS |
CACCTCAAAGACCTTAGTGA+GGG | 0.642692 | 4.1:+51226999 | MS.gene51357:CDS |
TGCAGTGAGAAATTCTAGCA+AGG | 0.643300 | 4.1:-51229934 | None:intergenic |
AGGATCTTAAAGAAACGTCA+AGG | 0.646273 | 4.1:+51227201 | MS.gene51357:CDS |
TGAATTAGAGCTCTTTACAA+CGG | 0.658591 | 4.1:+51228018 | MS.gene51357:CDS |
TTAGTAGCGTAACATAGAAG+GGG | 0.659283 | 4.1:-51219536 | None:intergenic |
TTGGTCATACCGCTTTGACA+AGG | 0.662027 | 4.1:-51228301 | None:intergenic |
GATACGTGGATAGGAGTAGG+AGG | 0.665547 | 4.1:+51219741 | MS.gene51357:CDS |
CAGACACCCATGCATTGTTG+AGG | 0.669111 | 4.1:-51229087 | None:intergenic |
ATGCCTTAAAATCTCCATTG+TGG | 0.671659 | 4.1:-51226872 | None:intergenic |
TGAAAATGGTGTTAGTGAGG+AGG | 0.675695 | 4.1:+51229802 | MS.gene51357:CDS |
TGACTACCTCAACAATGCAT+GGG | 0.680426 | 4.1:+51229081 | MS.gene51357:CDS |
CCACCTCAAAGACCTTAGTG+AGG | 0.682056 | 4.1:+51226998 | MS.gene51357:CDS |
ATGGGTGAGTAAAACTACAC+CGG | 0.689202 | 4.1:-51229113 | None:intergenic |
ATCGATACTGTGAAACACTT+AGG | 0.689353 | 4.1:+51219821 | MS.gene51357:CDS |
ACGACCAAAGCTTAACCTTG+GGG | 0.696222 | 4.1:-51227852 | None:intergenic |
GAGATGTTTAAGGACCACAA+TGG | 0.706318 | 4.1:+51226858 | MS.gene51357:CDS |
TTGCGGATATCACTAAACTG+AGG | 0.729129 | 4.1:-51227926 | None:intergenic |
AGGAATGTTAAGTCTCTACG+AGG | 0.767381 | 4.1:+51226914 | MS.gene51357:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 51219443 | 51230042 | 51219443 | ID=MS.gene51357 |
chr4.1 | mRNA | 51219443 | 51230042 | 51219443 | ID=MS.gene51357.t1;Parent=MS.gene51357 |
chr4.1 | exon | 51219443 | 51219646 | 51219443 | ID=MS.gene51357.t1.exon1;Parent=MS.gene51357.t1 |
chr4.1 | CDS | 51219443 | 51219646 | 51219443 | ID=cds.MS.gene51357.t1;Parent=MS.gene51357.t1 |
chr4.1 | exon | 51219734 | 51219998 | 51219734 | ID=MS.gene51357.t1.exon2;Parent=MS.gene51357.t1 |
chr4.1 | CDS | 51219734 | 51219998 | 51219734 | ID=cds.MS.gene51357.t1;Parent=MS.gene51357.t1 |
chr4.1 | exon | 51226850 | 51227222 | 51226850 | ID=MS.gene51357.t1.exon3;Parent=MS.gene51357.t1 |
chr4.1 | CDS | 51226850 | 51227222 | 51226850 | ID=cds.MS.gene51357.t1;Parent=MS.gene51357.t1 |
chr4.1 | exon | 51227829 | 51228050 | 51227829 | ID=MS.gene51357.t1.exon4;Parent=MS.gene51357.t1 |
chr4.1 | CDS | 51227829 | 51228050 | 51227829 | ID=cds.MS.gene51357.t1;Parent=MS.gene51357.t1 |
chr4.1 | exon | 51228175 | 51228313 | 51228175 | ID=MS.gene51357.t1.exon5;Parent=MS.gene51357.t1 |
chr4.1 | CDS | 51228175 | 51228313 | 51228175 | ID=cds.MS.gene51357.t1;Parent=MS.gene51357.t1 |
chr4.1 | exon | 51229010 | 51229258 | 51229010 | ID=MS.gene51357.t1.exon6;Parent=MS.gene51357.t1 |
chr4.1 | CDS | 51229010 | 51229258 | 51229010 | ID=cds.MS.gene51357.t1;Parent=MS.gene51357.t1 |
chr4.1 | exon | 51229752 | 51230042 | 51229752 | ID=MS.gene51357.t1.exon7;Parent=MS.gene51357.t1 |
chr4.1 | CDS | 51229752 | 51230042 | 51229752 | ID=cds.MS.gene51357.t1;Parent=MS.gene51357.t1 |
Gene Sequence |
Protein sequence |