Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51655.t1 | XP_003598309.1 | 97.6 | 340 | 8 | 0 | 14 | 353 | 110 | 449 | 3.80E-192 | 680.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51655.t1 | Q9FKT0 | 73.8 | 336 | 87 | 1 | 17 | 352 | 116 | 450 | 1.4e-147 | 523.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51655.t1 | G7J0F5 | 97.6 | 340 | 8 | 0 | 14 | 353 | 110 | 449 | 2.8e-192 | 680.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051568 | MS.gene51655 | 0.81239 | 4.34E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene51655 | 0.805582 | 1.24E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51655.t1 | MTR_3g010170 | 97.361 | 341 | 9 | 0 | 14 | 354 | 110 | 450 | 0.0 | 694 |
| MS.gene51655.t1 | MTR_8g070520 | 74.432 | 352 | 85 | 3 | 1 | 352 | 108 | 454 | 0.0 | 550 |
| MS.gene51655.t1 | MTR_8g070520 | 73.729 | 354 | 88 | 3 | 1 | 354 | 108 | 456 | 0.0 | 548 |
| MS.gene51655.t1 | MTR_7g026230 | 31.429 | 280 | 168 | 9 | 83 | 354 | 91 | 354 | 6.56e-41 | 147 |
| MS.gene51655.t1 | MTR_6g004000 | 29.643 | 280 | 173 | 8 | 83 | 354 | 91 | 354 | 1.27e-39 | 144 |
| MS.gene51655.t1 | MTR_2g096840 | 30.357 | 280 | 171 | 8 | 83 | 354 | 91 | 354 | 1.37e-39 | 144 |
| MS.gene51655.t1 | MTR_2g008050 | 30.000 | 280 | 172 | 8 | 83 | 354 | 91 | 354 | 5.61e-39 | 142 |
| MS.gene51655.t1 | MTR_0015s0130 | 30.357 | 280 | 171 | 8 | 83 | 354 | 91 | 354 | 8.58e-39 | 142 |
| MS.gene51655.t1 | MTR_3g095530 | 31.071 | 280 | 169 | 9 | 83 | 354 | 91 | 354 | 9.22e-39 | 142 |
| MS.gene51655.t1 | MTR_7g093260 | 30.357 | 280 | 171 | 9 | 83 | 354 | 91 | 354 | 2.20e-38 | 141 |
| MS.gene51655.t1 | MTR_7g027185 | 28.049 | 246 | 147 | 9 | 85 | 318 | 92 | 319 | 1.48e-22 | 97.4 |
| MS.gene51655.t1 | MTR_7g027185 | 25.597 | 293 | 179 | 10 | 85 | 356 | 92 | 366 | 2.38e-22 | 97.4 |
| MS.gene51655.t1 | MTR_7g027185 | 26.667 | 240 | 146 | 9 | 85 | 312 | 92 | 313 | 5.84e-19 | 86.7 |
| MS.gene51655.t1 | MTR_3g030550 | 25.283 | 265 | 171 | 10 | 97 | 351 | 90 | 337 | 4.98e-17 | 81.6 |
| MS.gene51655.t1 | MTR_8g089630 | 23.954 | 263 | 168 | 9 | 78 | 321 | 104 | 353 | 3.44e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51655.t1 | AT5G56180 | 73.810 | 336 | 87 | 1 | 17 | 352 | 116 | 450 | 0.0 | 538 |
| MS.gene51655.t1 | AT5G56180 | 71.875 | 288 | 80 | 1 | 65 | 352 | 32 | 318 | 6.31e-161 | 454 |
| MS.gene51655.t1 | AT5G56180 | 76.800 | 250 | 57 | 1 | 17 | 266 | 116 | 364 | 1.02e-142 | 410 |
| MS.gene51655.t1 | AT3G12110 | 31.429 | 280 | 168 | 9 | 83 | 354 | 91 | 354 | 3.91e-41 | 148 |
| MS.gene51655.t1 | AT2G42090 | 30.208 | 288 | 173 | 10 | 76 | 354 | 75 | 343 | 2.67e-40 | 145 |
| MS.gene51655.t1 | AT3G53750 | 30.357 | 280 | 171 | 9 | 83 | 354 | 91 | 354 | 2.99e-39 | 143 |
| MS.gene51655.t1 | AT3G53750 | 30.357 | 280 | 171 | 9 | 83 | 354 | 91 | 354 | 2.99e-39 | 143 |
| MS.gene51655.t1 | AT2G37620 | 30.357 | 280 | 171 | 9 | 83 | 354 | 91 | 354 | 2.99e-39 | 143 |
| MS.gene51655.t1 | AT2G37620 | 30.357 | 280 | 171 | 9 | 83 | 354 | 91 | 354 | 2.99e-39 | 143 |
| MS.gene51655.t1 | AT2G37620 | 30.357 | 280 | 171 | 9 | 83 | 354 | 91 | 354 | 2.99e-39 | 143 |
| MS.gene51655.t1 | AT2G37620 | 30.357 | 280 | 171 | 9 | 83 | 354 | 91 | 354 | 2.99e-39 | 143 |
| MS.gene51655.t1 | AT5G09810 | 31.429 | 280 | 168 | 9 | 83 | 354 | 91 | 354 | 1.06e-38 | 142 |
| MS.gene51655.t1 | AT2G42100 | 29.433 | 282 | 175 | 9 | 83 | 356 | 92 | 357 | 1.66e-37 | 139 |
| MS.gene51655.t1 | AT3G46520 | 29.643 | 280 | 173 | 8 | 83 | 354 | 91 | 354 | 7.37e-37 | 137 |
| MS.gene51655.t1 | AT3G46520 | 29.643 | 280 | 173 | 8 | 83 | 354 | 91 | 354 | 7.37e-37 | 137 |
| MS.gene51655.t1 | AT1G49240 | 29.643 | 280 | 173 | 9 | 83 | 354 | 91 | 354 | 9.44e-37 | 136 |
| MS.gene51655.t1 | AT3G18780 | 29.643 | 280 | 173 | 9 | 83 | 354 | 91 | 354 | 9.54e-37 | 136 |
| MS.gene51655.t1 | AT3G18780 | 29.643 | 280 | 173 | 9 | 83 | 354 | 91 | 354 | 1.00e-36 | 136 |
| MS.gene51655.t1 | AT3G18780 | 29.643 | 280 | 173 | 9 | 83 | 354 | 91 | 354 | 1.00e-36 | 136 |
| MS.gene51655.t1 | AT5G59370 | 29.286 | 280 | 174 | 8 | 83 | 354 | 91 | 354 | 2.91e-36 | 135 |
| MS.gene51655.t1 | AT5G59370 | 29.286 | 280 | 174 | 8 | 83 | 354 | 91 | 354 | 2.91e-36 | 135 |
| MS.gene51655.t1 | AT2G42170 | 28.269 | 283 | 174 | 9 | 80 | 353 | 43 | 305 | 3.23e-34 | 129 |
| MS.gene51655.t1 | AT2G42170 | 28.269 | 283 | 174 | 9 | 80 | 353 | 43 | 305 | 3.23e-34 | 129 |
| MS.gene51655.t1 | AT2G42170 | 28.269 | 283 | 174 | 9 | 80 | 353 | 43 | 305 | 3.30e-34 | 128 |
| MS.gene51655.t1 | AT2G42170 | 28.269 | 283 | 174 | 9 | 80 | 353 | 43 | 305 | 3.30e-34 | 128 |
| MS.gene51655.t1 | AT2G42170 | 29.665 | 209 | 129 | 6 | 153 | 353 | 9 | 207 | 1.58e-24 | 100 |
| MS.gene51655.t1 | AT3G27000 | 25.532 | 329 | 184 | 12 | 36 | 318 | 6 | 319 | 5.17e-21 | 93.6 |
| MS.gene51655.t1 | AT3G60830 | 26.415 | 265 | 167 | 9 | 97 | 351 | 91 | 337 | 4.58e-19 | 87.8 |
| MS.gene51655.t1 | AT1G13180 | 23.105 | 277 | 180 | 10 | 64 | 321 | 90 | 352 | 4.35e-12 | 67.4 |
Find 81 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCATTCAAACATATTTA+TGG | 0.206225 | 3.4:+4982016 | MS.gene51655:CDS |
| TGTACAATGATTGAAAATTT+AGG | 0.234560 | 3.4:-4985060 | None:intergenic |
| GGTTCCGGCTATTGCAAATT+TGG | 0.256929 | 3.4:+4982168 | MS.gene51655:CDS |
| CCTGGTGCTATTATCATTGA+TGG | 0.305349 | 3.4:+4982055 | MS.gene51655:CDS |
| TCTGGAATAGCTGTTAATAT+AGG | 0.337868 | 3.4:+4984600 | MS.gene51655:CDS |
| AACTGCATGTTTGCCAGGTT+TGG | 0.340994 | 3.4:+4985835 | MS.gene51655:CDS |
| AGCAAATATGCTTGTCCATC+GGG | 0.346514 | 3.4:+4982195 | MS.gene51655:CDS |
| GGTCAGAGAGCTCAGGTTCC+TGG | 0.353049 | 3.4:+4982037 | MS.gene51655:CDS |
| TATGCTGCAAAACGAACTTC+TGG | 0.356150 | 3.4:+4984582 | MS.gene51655:CDS |
| TGAATGACAGCTGGGGCCTC+TGG | 0.370029 | 3.4:-4982003 | None:intergenic |
| TTATTCAAGCCACATCTTGC+TGG | 0.370601 | 3.4:+4985333 | MS.gene51655:CDS |
| CTGGGAGCACTGAAAGTTAC+AGG | 0.382783 | 3.4:+4985007 | MS.gene51655:CDS |
| ATATTTATCATCAAGGTAGT+AGG | 0.385824 | 3.4:-4986407 | None:intergenic |
| GAAAGTTACAGGATTTCTTA+AGG | 0.385828 | 3.4:+4985018 | MS.gene51655:CDS |
| CAGGAACATTCAAGTCGAAC+AGG | 0.394489 | 3.4:-4983962 | None:intergenic |
| CGGTGTGGAAGTTGTGGGAC+TGG | 0.402375 | 3.4:+4984988 | MS.gene51655:CDS |
| TCCGTGAATTGCAGATCCTT+TGG | 0.415733 | 3.4:+4981980 | MS.gene51655:CDS |
| GGTGTGGAAGTTGTGGGACT+GGG | 0.427025 | 3.4:+4984989 | MS.gene51655:CDS |
| TTACCATCATAATGGCATAT+TGG | 0.430990 | 3.4:-4983706 | None:intergenic |
| GGAGGAACTGCATGTTTGCC+AGG | 0.432955 | 3.4:+4985830 | MS.gene51655:CDS |
| CCGGCTATTGCAAATTTGGT+TGG | 0.449861 | 3.4:+4982172 | MS.gene51655:CDS |
| TGCCATTCTGCAGGATTACC+AGG | 0.453869 | 3.4:+4985773 | MS.gene51655:CDS |
| CACTGTTCGCGCTTTGAAAG+AGG | 0.459873 | 3.4:+4985081 | MS.gene51655:CDS |
| CCAGGCCATAGCTCGTTGTA+TGG | 0.462389 | 3.4:+4985745 | MS.gene51655:CDS |
| AAGTTGTTGTCTCGATGCTC+TGG | 0.463461 | 3.4:-4983919 | None:intergenic |
| GCATGTTTGCCAGGTTTGGC+AGG | 0.469643 | 3.4:+4985839 | MS.gene51655:CDS |
| AAATATGTTTGAATGACAGC+TGG | 0.475153 | 3.4:-4982012 | None:intergenic |
| TTGATTTCTCGGCAGGATGC+AGG | 0.481990 | 3.4:+4983648 | MS.gene51655:intron |
| TGCTGTTTGTGCTGTCAACC+AGG | 0.484017 | 3.4:+4983983 | MS.gene51655:CDS |
| AATGTAACTTACCATCATAA+TGG | 0.484345 | 3.4:-4983714 | None:intergenic |
| TCATTTCAAGCTACAGGAGA+TGG | 0.489367 | 3.4:+4985267 | MS.gene51655:CDS |
| ATGGAGAATTGCCATTCTGC+AGG | 0.493934 | 3.4:+4985764 | MS.gene51655:CDS |
| TTGAGTCGCCAATGTATACT+AGG | 0.505523 | 3.4:+4982792 | MS.gene51655:CDS |
| GCCAAAGGATCTGCAATTCA+CGG | 0.507616 | 3.4:-4981981 | None:intergenic |
| ATTGGTATAGAAACAATAAC+CGG | 0.510568 | 3.4:-4983688 | None:intergenic |
| CAAGCATCATTTCAAGCTAC+AGG | 0.515742 | 3.4:+4985261 | MS.gene51655:CDS |
| AAACATTTACCTGCCAAACC+TGG | 0.518419 | 3.4:-4985848 | None:intergenic |
| CCATACAACGAGCTATGGCC+TGG | 0.521337 | 3.4:-4985745 | None:intergenic |
| TAAGGTCGGTGTGGAAGTTG+TGG | 0.524103 | 3.4:+4984982 | MS.gene51655:CDS |
| AAGGTCGGTGTGGAAGTTGT+GGG | 0.524892 | 3.4:+4984983 | MS.gene51655:CDS |
| TATTTATGGTCAGAGAGCTC+AGG | 0.532621 | 3.4:+4982030 | MS.gene51655:CDS |
| TGGTTCGGAGCAAAGATGAT+TGG | 0.533936 | 3.4:+4986372 | MS.gene51655:CDS |
| CCAACCAAATTTGCAATAGC+CGG | 0.539236 | 3.4:-4982172 | None:intergenic |
| GAGCAAATATGCTTGTCCAT+CGG | 0.539547 | 3.4:+4982194 | MS.gene51655:CDS |
| CATACGGTGTCGATACTCAA+TGG | 0.542865 | 3.4:+4986352 | MS.gene51655:CDS |
| TAATGGTAAAGTAATGCGTA+AGG | 0.544895 | 3.4:+4984964 | MS.gene51655:CDS |
| GATTACCAGGTGACAACGAT+TGG | 0.546596 | 3.4:+4985786 | MS.gene51655:CDS |
| TATTTATCATCAAGGTAGTA+GGG | 0.551054 | 3.4:-4986406 | None:intergenic |
| TTGTACAGAAAGATTAGAGA+AGG | 0.552480 | 3.4:+4986272 | MS.gene51655:intron |
| ATTCCATTGGACATGTATGT+AGG | 0.557467 | 3.4:-4986312 | None:intergenic |
| CAGCTGGGGCCTCTGGCCAA+AGG | 0.557706 | 3.4:-4981996 | None:intergenic |
| GGTGTCGATACTCAATGGTT+CGG | 0.558157 | 3.4:+4986357 | MS.gene51655:CDS |
| ATACCAATATGCCATTATGA+TGG | 0.560403 | 3.4:+4983703 | MS.gene51655:CDS |
| TTGTACCAATCGTTGTCACC+TGG | 0.561702 | 3.4:-4985791 | None:intergenic |
| CATTGAGTATCGACACCGTA+TGG | 0.567226 | 3.4:-4986351 | None:intergenic |
| AGGTATGACTCTAATTCCAT+TGG | 0.572150 | 3.4:-4986325 | None:intergenic |
| ATTCTCCATACAACGAGCTA+TGG | 0.573708 | 3.4:-4985750 | None:intergenic |
| AATATGTTTGAATGACAGCT+GGG | 0.574569 | 3.4:-4982011 | None:intergenic |
| TGGTTGACAGCACAAACAGC+AGG | 0.587707 | 3.4:-4983981 | None:intergenic |
| CTTCCTACATACATGTCCAA+TGG | 0.588091 | 3.4:+4986309 | MS.gene51655:CDS |
| AATGTTGCAGATCGCCCCGA+TGG | 0.593723 | 3.4:-4982210 | None:intergenic |
| CACCTGGTAATCCTGCAGAA+TGG | 0.600972 | 3.4:-4985775 | None:intergenic |
| TGTTTACACTTTCAAAAGAG+CGG | 0.606191 | 3.4:+4985292 | MS.gene51655:CDS |
| CCATCAATGATAATAGCACC+AGG | 0.611496 | 3.4:-4982055 | None:intergenic |
| TATGGCCTGGTGTAAACCTA+CGG | 0.612970 | 3.4:-4985732 | None:intergenic |
| TCTTGGTATAGGCAAGCCGT+AGG | 0.613936 | 3.4:+4985716 | MS.gene51655:intron |
| GTATCGACACCGTATGGAGG+AGG | 0.616538 | 3.4:-4986345 | None:intergenic |
| AGAGTCATACCTCCTCCATA+CGG | 0.619890 | 3.4:+4986336 | MS.gene51655:CDS |
| GGTAAAGTAATGCGTAAGGT+CGG | 0.623567 | 3.4:+4984968 | MS.gene51655:CDS |
| ATTGCAGATCCTTTGGCCAG+AGG | 0.623599 | 3.4:+4981987 | MS.gene51655:CDS |
| TGTCGAAGCCTAGTATACAT+TGG | 0.632551 | 3.4:-4982800 | None:intergenic |
| TGTATGTAGGAAGTAAGCCA+TGG | 0.633323 | 3.4:-4986299 | None:intergenic |
| AGGAACATTCAAGTCGAACA+GGG | 0.639526 | 3.4:-4983961 | None:intergenic |
| ACTTACACTCCAGCAAGATG+TGG | 0.640629 | 3.4:-4985342 | None:intergenic |
| AAGGATCTGCAATTCACGGA+CGG | 0.643374 | 3.4:-4981977 | None:intergenic |
| TGAGTATCGACACCGTATGG+AGG | 0.656190 | 3.4:-4986348 | None:intergenic |
| AGATTAGAGAAGGAACTCCA+TGG | 0.658596 | 3.4:+4986282 | MS.gene51655:CDS |
| GCAAATATGCTTGTCCATCG+GGG | 0.676281 | 3.4:+4982196 | MS.gene51655:CDS |
| GCAAGCCGTAGGTTTACACC+AGG | 0.677496 | 3.4:+4985727 | MS.gene51655:CDS |
| AGTAATGCGTAAGGTCGGTG+TGG | 0.683151 | 3.4:+4984973 | MS.gene51655:CDS |
| ATATGTTTGAATGACAGCTG+GGG | 0.703396 | 3.4:-4982010 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTATATTTTAATTAGGA+GGG | - | chr3.4:4982695-4982714 | None:intergenic | 10.0% |
| !!! | TATATTATATTTTAATTAGG+AGG | - | chr3.4:4982696-4982715 | None:intergenic | 10.0% |
| !!! | TTATATATTTTGAAAAATGT+AGG | + | chr3.4:4984545-4984564 | MS.gene51655:intron | 10.0% |
| !! | ATGTATTTGTGTTATAAATA+GGG | - | chr3.4:4982623-4982642 | None:intergenic | 15.0% |
| !! | CAAAATATTGTAAAAGAAAA+CGG | + | chr3.4:4983229-4983248 | MS.gene51655:intron | 15.0% |
| !! | TATATTCTCTTAAGTTTATT+AGG | + | chr3.4:4983270-4983289 | MS.gene51655:intron | 15.0% |
| !! | TATGTATTTGTGTTATAAAT+AGG | - | chr3.4:4982624-4982643 | None:intergenic | 15.0% |
| !!! | AAGTGTTTTTAGAAAATTAA+CGG | - | chr3.4:4983025-4983044 | None:intergenic | 15.0% |
| !!! | GGTTATATATTGTTTTAATT+AGG | - | chr3.4:4982671-4982690 | None:intergenic | 15.0% |
| !!! | GTTTTTATATTTTCACTTAT+TGG | + | chr3.4:4985671-4985690 | MS.gene51655:intron | 15.0% |
| !!! | TCCCTTATTTAAAAATATTA+GGG | - | chr3.4:4983336-4983355 | None:intergenic | 15.0% |
| !!! | TTAATTACAAATTTTCTGTT+TGG | + | chr3.4:4985178-4985197 | MS.gene51655:intron | 15.0% |
| !!! | TTCCCTTATTTAAAAATATT+AGG | - | chr3.4:4983337-4983356 | None:intergenic | 15.0% |
| !! | AAAATGAAAACAAAAACATG+AGG | + | chr3.4:4983300-4983319 | MS.gene51655:intron | 20.0% |
| !! | AATGCTTAAATAAAAGGATA+TGG | - | chr3.4:4984137-4984156 | None:intergenic | 20.0% |
| !! | AGAACAACATAAAAATGATT+AGG | - | chr3.4:4983606-4983625 | None:intergenic | 20.0% |
| !! | AGTAGTTAATAGAATGAAAA+AGG | - | chr3.4:4985541-4985560 | None:intergenic | 20.0% |
| !! | ATTCATTACGGATTTATTAT+AGG | + | chr3.4:4983405-4983424 | MS.gene51655:intron | 20.0% |
| !! | GAAAATATAAAAACTAACAG+AGG | - | chr3.4:4985665-4985684 | None:intergenic | 20.0% |
| !! | GTCATAAATGCTTAAATAAA+AGG | - | chr3.4:4984143-4984162 | None:intergenic | 20.0% |
| !! | TAAATAATAACTTCTTGCAT+AGG | + | chr3.4:4986072-4986091 | MS.gene51655:intron | 20.0% |
| !! | TAACAACAAATAAAAGAAGT+CGG | - | chr3.4:4984509-4984528 | None:intergenic | 20.0% |
| !! | TAATCTTTCTGTACAAAATA+TGG | - | chr3.4:4986268-4986287 | None:intergenic | 20.0% |
| !! | TATGCAACTAAAGATAAATA+TGG | + | chr3.4:4984179-4984198 | MS.gene51655:intron | 20.0% |
| !! | TGATTTACAAAGTTATTGTA+TGG | + | chr3.4:4983740-4983759 | MS.gene51655:intron | 20.0% |
| !! | TGTACAATGATTGAAAATTT+AGG | - | chr3.4:4985063-4985082 | None:intergenic | 20.0% |
| !! | TTACCATTAAAAACTGTAAA+AGG | - | chr3.4:4984953-4984972 | None:intergenic | 20.0% |
| !! | TTATTAACCAAAATTACATG+CGG | - | chr3.4:4983829-4983848 | None:intergenic | 20.0% |
| !! | TTGCTTGATGTTTAATATAT+TGG | + | chr3.4:4983625-4983644 | MS.gene51655:intron | 20.0% |
| !!! | AACATTTTTGGTAATGATTT+TGG | + | chr3.4:4982227-4982246 | MS.gene51655:intron | 20.0% |
| !!! | AGCCCTAATATTTTTAAATA+AGG | + | chr3.4:4983331-4983350 | MS.gene51655:intron | 20.0% |
| !!! | AGTGTTTTTAGAAAATTAAC+GGG | - | chr3.4:4983024-4983043 | None:intergenic | 20.0% |
| !!! | ATGTTTTGTTAGAATGAAAA+TGG | + | chr3.4:4982274-4982293 | MS.gene51655:intron | 20.0% |
| !!! | GCCCTAATATTTTTAAATAA+GGG | + | chr3.4:4983332-4983351 | MS.gene51655:intron | 20.0% |
| !!! | TAATATATTGGTTGATTTCT+CGG | + | chr3.4:4983637-4983656 | MS.gene51655:intron | 20.0% |
| !!! | TGTTTTAATTAGGACATTTA+TGG | - | chr3.4:4982661-4982680 | None:intergenic | 20.0% |
| !!! | TTCATTTTAAATTGCTAACA+TGG | + | chr3.4:4983071-4983090 | MS.gene51655:intron | 20.0% |
| !!! | TTTTTGCAACTATTTATAAC+AGG | + | chr3.4:4982825-4982844 | MS.gene51655:CDS | 20.0% |
| ! | AATCACAGTATTGCATTATT+AGG | - | chr3.4:4984792-4984811 | None:intergenic | 25.0% |
| ! | AATCTTTGTCTATGGTTAAT+TGG | + | chr3.4:4985609-4985628 | MS.gene51655:intron | 25.0% |
| ! | AATGTAACTTACCATCATAA+TGG | - | chr3.4:4983717-4983736 | None:intergenic | 25.0% |
| ! | ACAGATTGACCATAATATTA+AGG | + | chr3.4:4985391-4985410 | MS.gene51655:intron | 25.0% |
| ! | AGAAACTGAAAAAACTGAAA+AGG | - | chr3.4:4982428-4982447 | None:intergenic | 25.0% |
| ! | AGTTAATAGAATGAAAAAGG+AGG | - | chr3.4:4985538-4985557 | None:intergenic | 25.0% |
| ! | ATTATTGATGTTTCAGATCT+CGG | - | chr3.4:4985125-4985144 | None:intergenic | 25.0% |
| ! | ATTGGTATAGAAACAATAAC+CGG | - | chr3.4:4983691-4983710 | None:intergenic | 25.0% |
| ! | CAGGTAACAATTTGTAAATA+TGG | - | chr3.4:4984434-4984453 | None:intergenic | 25.0% |
| ! | CGTAAACACGTAAATTTATA+AGG | - | chr3.4:4986113-4986132 | None:intergenic | 25.0% |
| ! | CTGTCATTCAAACATATTTA+TGG | + | chr3.4:4982016-4982035 | MS.gene51655:CDS | 25.0% |
| ! | GTTATGAAAATCTTTGTCTA+TGG | + | chr3.4:4985601-4985620 | MS.gene51655:intron | 25.0% |
| ! | TAAAAAATTCAGCTATTGCA+AGG | - | chr3.4:4986054-4986073 | None:intergenic | 25.0% |
| ! | TCAAGAAACATGTATAGAAA+AGG | + | chr3.4:4986014-4986033 | MS.gene51655:intron | 25.0% |
| ! | TTAAAAACTGTAAAAGGACA+AGG | - | chr3.4:4984947-4984966 | None:intergenic | 25.0% |
| ! | TTTAGTTGCATATAAATCCT+TGG | - | chr3.4:4984171-4984190 | None:intergenic | 25.0% |
| ! | TTTGTTAGAATGAAAATGGT+TGG | + | chr3.4:4982278-4982297 | MS.gene51655:intron | 25.0% |
| !! | ATTTTTAAATAAGGGAAGCT+CGG | + | chr3.4:4983340-4983359 | MS.gene51655:intron | 25.0% |
| !! | GATCTGAAACATCAATAATA+AGG | + | chr3.4:4985126-4985145 | MS.gene51655:intron | 25.0% |
| !! | TGTCCTTTTACAGTTTTTAA+TGG | + | chr3.4:4984947-4984966 | MS.gene51655:intron | 25.0% |
| !! | TTTCCAAAACTTGATTGTTT+TGG | - | chr3.4:4982966-4982985 | None:intergenic | 25.0% |
| !! | TTTTGATATCTTAACCTAAC+TGG | + | chr3.4:4985435-4985454 | MS.gene51655:intron | 25.0% |
| !!! | AAACAATCAAGTTTTGGAAA+AGG | + | chr3.4:4982966-4982985 | MS.gene51655:intron | 25.0% |
| !!! | CTGAAGTTTAAGTTTTTCAT+CGG | - | chr3.4:4982377-4982396 | None:intergenic | 25.0% |
| !!! | TACAAATCTGTAGTTTTATC+AGG | + | chr3.4:4985809-4985828 | MS.gene51655:CDS | 25.0% |
| !!! | TGCATGTTTTTATTGCAAAT+TGG | + | chr3.4:4984472-4984491 | MS.gene51655:intron | 25.0% |
| !!! | TGGTGTTATAATCATTAAAC+AGG | - | chr3.4:4984117-4984136 | None:intergenic | 25.0% |
| !!! | TTATATTTTAATTAGGAGGG+AGG | - | chr3.4:4982692-4982711 | None:intergenic | 25.0% |
| !!! | TTTTTGGTAATGATTTTGGT+TGG | + | chr3.4:4982231-4982250 | MS.gene51655:intron | 25.0% |
| AAAAATCGTTGCAAGCTTAT+AGG | - | chr3.4:4986203-4986222 | None:intergenic | 30.0% | |
| AAAACACTTCTGCAGATAAT+AGG | + | chr3.4:4982397-4982416 | MS.gene51655:intron | 30.0% | |
| AAATATGTTTGAATGACAGC+TGG | - | chr3.4:4982015-4982034 | None:intergenic | 30.0% | |
| AACCGTTCAAAGAATATACA+CGG | - | chr3.4:4984827-4984846 | None:intergenic | 30.0% | |
| AATATGTTTGAATGACAGCT+GGG | - | chr3.4:4982014-4982033 | None:intergenic | 30.0% | |
| AATGAGAGTAAGGTAAAATG+AGG | - | chr3.4:4982344-4982363 | None:intergenic | 30.0% | |
| AGAAATGTTCATGCTTAACA+TGG | + | chr3.4:4983552-4983571 | MS.gene51655:intron | 30.0% | |
| AGATCTATGTAGACATGTAT+AGG | + | chr3.4:4982923-4982942 | MS.gene51655:intron | 30.0% | |
| AGGACATTTATGGTTATATG+AGG | - | chr3.4:4982651-4982670 | None:intergenic | 30.0% | |
| AGTAACAGAACACAAGATAT+TGG | - | chr3.4:4982102-4982121 | None:intergenic | 30.0% | |
| ATACCAATATGCCATTATGA+TGG | + | chr3.4:4983703-4983722 | MS.gene51655:CDS | 30.0% | |
| ATTGACCATAATATTAAGGC+AGG | + | chr3.4:4985395-4985414 | MS.gene51655:intron | 30.0% | |
| ATTGTAAAAGAAAACGGTGA+AGG | + | chr3.4:4983235-4983254 | MS.gene51655:intron | 30.0% | |
| CAACCAGGTAATATATCTTA+AGG | + | chr3.4:4983998-4984017 | MS.gene51655:intron | 30.0% | |
| CAAGAGAAAAGAAAACAGTA+GGG | - | chr3.4:4984659-4984678 | None:intergenic | 30.0% | |
| GAAAGTTACAGGATTTCTTA+AGG | + | chr3.4:4985018-4985037 | MS.gene51655:CDS | 30.0% | |
| TAAGCTTATGTTTCACTTCT+TGG | + | chr3.4:4985699-4985718 | MS.gene51655:intron | 30.0% | |
| TAATGGTAAAGTAATGCGTA+AGG | + | chr3.4:4984964-4984983 | MS.gene51655:CDS | 30.0% | |
| TATGTTTCACTTCTTGGTAT+AGG | + | chr3.4:4985705-4985724 | MS.gene51655:intron | 30.0% | |
| TGTCAGATTAGTAAATGCTT+AGG | + | chr3.4:4985579-4985598 | MS.gene51655:intron | 30.0% | |
| TGTTTACACTTTCAAAAGAG+CGG | + | chr3.4:4985292-4985311 | MS.gene51655:CDS | 30.0% | |
| TTACAAATTGTTACCTGAAG+AGG | + | chr3.4:4984437-4984456 | MS.gene51655:intron | 30.0% | |
| TTACCATCATAATGGCATAT+TGG | - | chr3.4:4983709-4983728 | None:intergenic | 30.0% | |
| TTATTTGTTTCCACCTTTGT+TGG | + | chr3.4:4984903-4984922 | MS.gene51655:intron | 30.0% | |
| TTCATGCTTAACATGGAAAA+AGG | + | chr3.4:4983559-4983578 | MS.gene51655:intron | 30.0% | |
| TTGTACAGAAAGATTAGAGA+AGG | + | chr3.4:4986272-4986291 | MS.gene51655:intron | 30.0% | |
| TTTGTCTATGGTTAATTGGA+CGG | + | chr3.4:4985613-4985632 | MS.gene51655:intron | 30.0% | |
| ! | AGGTCAAATTGATGACAATT+TGG | + | chr3.4:4984245-4984264 | MS.gene51655:intron | 30.0% |
| ! | GAGTGCATTTTCAAAAACAA+TGG | + | chr3.4:4983155-4983174 | MS.gene51655:intron | 30.0% |
| ! | GTTTTGTATTTCTTGCAATG+CGG | + | chr3.4:4985363-4985382 | MS.gene51655:intron | 30.0% |
| ! | TATAAGCTTGCAACGATTTT+TGG | + | chr3.4:4986202-4986221 | MS.gene51655:intron | 30.0% |
| ! | TCACCAAAACAATCAAGTTT+TGG | + | chr3.4:4982960-4982979 | MS.gene51655:intron | 30.0% |
| ! | TCTGGAATAGCTGTTAATAT+AGG | + | chr3.4:4984600-4984619 | MS.gene51655:CDS | 30.0% |
| ! | TGTCATTTCTTAAACACTCA+CGG | + | chr3.4:4982854-4982873 | MS.gene51655:intron | 30.0% |
| !! | AGTTAAATGAGAGCTTTGAA+AGG | + | chr3.4:4986137-4986156 | MS.gene51655:intron | 30.0% |
| !!! | AAATCTGTAGTTTTATCAGG+AGG | + | chr3.4:4985812-4985831 | MS.gene51655:CDS | 30.0% |
| !!! | ACAATAACCGGTTGATTTTT+TGG | - | chr3.4:4983679-4983698 | None:intergenic | 30.0% |
| !!! | CCTTTTTGTTTTGTCGTATT+CGG | - | chr3.4:4984379-4984398 | None:intergenic | 30.0% |
| !!! | CTTTTATCTGTTTTTGCTCA+AGG | + | chr3.4:4982144-4982163 | MS.gene51655:intron | 30.0% |
| AAGTTATGAGACAAGGGAAA+GGG | - | chr3.4:4982600-4982619 | None:intergenic | 35.0% | |
| AATAGGGAAGTTATGAGACA+AGG | - | chr3.4:4982607-4982626 | None:intergenic | 35.0% | |
| AATTGTCACCATGTGCTAAA+AGG | - | chr3.4:4983481-4983500 | None:intergenic | 35.0% | |
| ACCCCAAAAGTAGTAGAATT+AGG | - | chr3.4:4986245-4986264 | None:intergenic | 35.0% | |
| AGCATTTACTAATCTGACAG+AGG | - | chr3.4:4985578-4985597 | None:intergenic | 35.0% | |
| AGGTAAGTAAAGTCAGACTA+AGG | - | chr3.4:4984315-4984334 | None:intergenic | 35.0% | |
| AGGTATGACTCTAATTCCAT+TGG | - | chr3.4:4986328-4986347 | None:intergenic | 35.0% | |
| ATAGCCAGTAGTCAGTAAAT+AGG | - | chr3.4:4984055-4984074 | None:intergenic | 35.0% | |
| ATAGGGAAGTTATGAGACAA+GGG | - | chr3.4:4982606-4982625 | None:intergenic | 35.0% | |
| ATATGTTTGAATGACAGCTG+GGG | - | chr3.4:4982013-4982032 | None:intergenic | 35.0% | |
| ATCCAAAAAGACTCGTGAAA+TGG | - | chr3.4:4985987-4986006 | None:intergenic | 35.0% | |
| ATCTTGTGTTCTGTTACTGA+TGG | + | chr3.4:4982104-4982123 | MS.gene51655:intron | 35.0% | |
| ATGGTTAATTGGACGGTATA+AGG | + | chr3.4:4985620-4985639 | MS.gene51655:intron | 35.0% | |
| ATTCCATTGGACATGTATGT+AGG | - | chr3.4:4986315-4986334 | None:intergenic | 35.0% | |
| CAAATTCCTGCACATCAAAA+AGG | - | chr3.4:4982766-4982785 | None:intergenic | 35.0% | |
| CACCGTGTATATTCTTTGAA+CGG | + | chr3.4:4984822-4984841 | MS.gene51655:intron | 35.0% | |
| CATTTGTGATAGAGAGAAGA+TGG | + | chr3.4:4983117-4983136 | MS.gene51655:intron | 35.0% | |
| CCAAGACTCTCAAATTTCTT+GGG | - | chr3.4:4982524-4982543 | None:intergenic | 35.0% | |
| CCACCTTAAGATATATTACC+TGG | - | chr3.4:4984004-4984023 | None:intergenic | 35.0% | |
| CCAGGTAATATATCTTAAGG+TGG | + | chr3.4:4984001-4984020 | MS.gene51655:intron | 35.0% | |
| CCGAATACGACAAAACAAAA+AGG | + | chr3.4:4984376-4984395 | MS.gene51655:intron | 35.0% | |
| CTCAATATGTTGTCTAAGTG+TGG | + | chr3.4:4984749-4984768 | MS.gene51655:intron | 35.0% | |
| CTGTTATATGTTCATCACCA+TGG | - | chr3.4:4983775-4983794 | None:intergenic | 35.0% | |
| GAAAACGGTGAAGGAAATAT+TGG | + | chr3.4:4983244-4983263 | MS.gene51655:intron | 35.0% | |
| GCAAGAGAAAAGAAAACAGT+AGG | - | chr3.4:4984660-4984679 | None:intergenic | 35.0% | |
| GGGAAGGTTTAGATTCATTA+CGG | + | chr3.4:4983393-4983412 | MS.gene51655:intron | 35.0% | |
| GGTGAAACCAAAAAATCAAC+CGG | + | chr3.4:4983669-4983688 | MS.gene51655:CDS | 35.0% | |
| GTTTACCTTCCATTTGTAAG+AGG | + | chr3.4:4983430-4983449 | MS.gene51655:intron | 35.0% | |
| TACATTTACACCACCAACAA+AGG | - | chr3.4:4984919-4984938 | None:intergenic | 35.0% | |
| TAGTATCAGATGAAGAGTCT+TGG | - | chr3.4:4983516-4983535 | None:intergenic | 35.0% | |
| TCCAAGACTCTCAAATTTCT+TGG | - | chr3.4:4982525-4982544 | None:intergenic | 35.0% | |
| TCGAAGTCAAAATGAGAGTA+AGG | - | chr3.4:4982354-4982373 | None:intergenic | 35.0% | |
| TGAAATCAGCCTCTTACAAA+TGG | - | chr3.4:4983442-4983461 | None:intergenic | 35.0% | |
| TGCAACTTTGTGATAGAAAC+TGG | + | chr3.4:4982460-4982479 | MS.gene51655:intron | 35.0% | |
| ! | CTGATTCAGTATCTGGAATT+AGG | - | chr3.4:4983899-4983918 | None:intergenic | 35.0% |
| ! | CTTTTTGATGTGCAGGAATT+TGG | + | chr3.4:4982764-4982783 | MS.gene51655:intron | 35.0% |
| ! | GTTACCTATTTACTGACTAC+TGG | + | chr3.4:4984048-4984067 | MS.gene51655:intron | 35.0% |
| ! | TCATCTTCCGCATGTAATTT+TGG | + | chr3.4:4983819-4983838 | MS.gene51655:intron | 35.0% |
| ! | TGGCCTAATTCTACTACTTT+TGG | + | chr3.4:4986239-4986258 | MS.gene51655:intron | 35.0% |
| ! | TTCCATTTCACGAGTCTTTT+TGG | + | chr3.4:4985982-4986001 | MS.gene51655:intron | 35.0% |
| ! | TTGTTGCTTATATGATTCCC+TGG | + | chr3.4:4983858-4983877 | MS.gene51655:intron | 35.0% |
| ! | TTTTGGCAAGTGAAGAAACT+TGG | + | chr3.4:4986219-4986238 | MS.gene51655:intron | 35.0% |
| !! | CGGTTCTGAGTATTGAAATA+AGG | - | chr3.4:4982728-4982747 | None:intergenic | 35.0% |
| !! | GCCTAATTCTACTACTTTTG+GGG | + | chr3.4:4986241-4986260 | MS.gene51655:intron | 35.0% |
| !! | GGCCTAATTCTACTACTTTT+GGG | + | chr3.4:4986240-4986259 | MS.gene51655:intron | 35.0% |
| !! | TTGGAACTAGCTCTAAACAA+TGG | + | chr3.4:4982250-4982269 | MS.gene51655:intron | 35.0% |
| !!! | TTATCTGTTTTTGCTCAAGG+CGG | + | chr3.4:4982147-4982166 | MS.gene51655:intron | 35.0% |
| AAACATTTACCTGCCAAACC+TGG | - | chr3.4:4985851-4985870 | None:intergenic | 40.0% | |
| AAACTGTAAAAGGACAAGGC+AGG | - | chr3.4:4984943-4984962 | None:intergenic | 40.0% | |
| AATCTTAGATCCAACGAGCT+TGG | + | chr3.4:4985507-4985526 | MS.gene51655:intron | 40.0% | |
| ACAATCACATTCACCTCTTC+AGG | - | chr3.4:4984453-4984472 | None:intergenic | 40.0% | |
| ACCATGTGCTAAAAGGTCTT+TGG | - | chr3.4:4983474-4983493 | None:intergenic | 40.0% | |
| AGATTAGAGAAGGAACTCCA+TGG | + | chr3.4:4986282-4986301 | MS.gene51655:CDS | 40.0% | |
| AGCAAATATGCTTGTCCATC+GGG | + | chr3.4:4982195-4982214 | MS.gene51655:CDS | 40.0% | |
| AGGAACATTCAAGTCGAACA+GGG | - | chr3.4:4983964-4983983 | None:intergenic | 40.0% | |
| AGGCAACAATTTGTAAAGCC+AGG | - | chr3.4:4983879-4983898 | None:intergenic | 40.0% | |
| AGTTATGAGACAAGGGAAAG+GGG | - | chr3.4:4982599-4982618 | None:intergenic | 40.0% | |
| ATCAGCCTCTTACAAATGGA+AGG | - | chr3.4:4983438-4983457 | None:intergenic | 40.0% | |
| ATCCGCCTGCCTTAATATTA+TGG | - | chr3.4:4985403-4985422 | None:intergenic | 40.0% | |
| ATTCCTGCACATCAAAAAGG+AGG | - | chr3.4:4982763-4982782 | None:intergenic | 40.0% | |
| ATTCTCCATACAACGAGCTA+TGG | - | chr3.4:4985753-4985772 | None:intergenic | 40.0% | |
| ATTGATGTTTCAGATCTCGG+AGG | - | chr3.4:4985122-4985141 | None:intergenic | 40.0% | |
| ATTTACACCACCAACAAAGG+TGG | - | chr3.4:4984916-4984935 | None:intergenic | 40.0% | |
| CAAGCATCATTTCAAGCTAC+AGG | + | chr3.4:4985261-4985280 | MS.gene51655:CDS | 40.0% | |
| CCAACCAAATTTGCAATAGC+CGG | - | chr3.4:4982175-4982194 | None:intergenic | 40.0% | |
| CCATCAATGATAATAGCACC+AGG | - | chr3.4:4982058-4982077 | None:intergenic | 40.0% | |
| CCCAAGAAATTTGAGAGTCT+TGG | + | chr3.4:4982521-4982540 | MS.gene51655:intron | 40.0% | |
| CGGTTAATTGGTAAAGGACT+GGG | - | chr3.4:4982571-4982590 | None:intergenic | 40.0% | |
| CTTCCTACATACATGTCCAA+TGG | + | chr3.4:4986309-4986328 | MS.gene51655:CDS | 40.0% | |
| GAAGTTATGAGACAAGGGAA+AGG | - | chr3.4:4982601-4982620 | None:intergenic | 40.0% | |
| GACCATAATATTAAGGCAGG+CGG | + | chr3.4:4985398-4985417 | MS.gene51655:intron | 40.0% | |
| GAGAAGATGGAAGACAAGTT+AGG | + | chr3.4:4983130-4983149 | MS.gene51655:intron | 40.0% | |
| GAGCAAATATGCTTGTCCAT+CGG | + | chr3.4:4982194-4982213 | MS.gene51655:CDS | 40.0% | |
| GGCAACAATTTGTAAAGCCA+GGG | - | chr3.4:4983878-4983897 | None:intergenic | 40.0% | |
| GGTAAAGTAATGCGTAAGGT+CGG | + | chr3.4:4984968-4984987 | MS.gene51655:CDS | 40.0% | |
| GTCTGACTTTACTTACCTAC+CGG | + | chr3.4:4984317-4984336 | MS.gene51655:intron | 40.0% | |
| GTGTGGTACAACGTTGATAT+TGG | + | chr3.4:4984766-4984785 | MS.gene51655:intron | 40.0% | |
| TATGCTGCAAAACGAACTTC+TGG | + | chr3.4:4984582-4984601 | MS.gene51655:CDS | 40.0% | |
| TATTTATGGTCAGAGAGCTC+AGG | + | chr3.4:4982030-4982049 | MS.gene51655:CDS | 40.0% | |
| TCATTTCAAGCTACAGGAGA+TGG | + | chr3.4:4985267-4985286 | MS.gene51655:CDS | 40.0% | |
| TCGGTTAATTGGTAAAGGAC+TGG | - | chr3.4:4982572-4982591 | None:intergenic | 40.0% | |
| TGCAATCAGTCTATCCAGTT+AGG | - | chr3.4:4985452-4985471 | None:intergenic | 40.0% | |
| TGCATATAAATCCTTGGCAG+AGG | - | chr3.4:4984165-4984184 | None:intergenic | 40.0% | |
| TGGTGAAAATTGACTGTGTC+TGG | + | chr3.4:4982298-4982317 | MS.gene51655:intron | 40.0% | |
| TGTATGTAGGAAGTAAGCCA+TGG | - | chr3.4:4986302-4986321 | None:intergenic | 40.0% | |
| TGTCGAAGCCTAGTATACAT+TGG | - | chr3.4:4982803-4982822 | None:intergenic | 40.0% | |
| TTATTCAAGCCACATCTTGC+TGG | + | chr3.4:4985333-4985352 | MS.gene51655:CDS | 40.0% | |
| TTCTATCACAAAGTTGCAGC+AGG | - | chr3.4:4982458-4982477 | None:intergenic | 40.0% | |
| TTGAGTCGCCAATGTATACT+AGG | + | chr3.4:4982792-4982811 | MS.gene51655:CDS | 40.0% | |
| TTGGATCTTTCCCTTCCAAA+TGG | + | chr3.4:4982540-4982559 | MS.gene51655:intron | 40.0% | |
| TTTGTTTCCACCTTTGTTGG+TGG | + | chr3.4:4984906-4984925 | MS.gene51655:intron | 40.0% | |
| ! | AAAGGAGGCAAAGTGTTAGA+CGG | - | chr3.4:4982748-4982767 | None:intergenic | 40.0% |
| ! | ATATTGGTTGATTTCTCGGC+AGG | + | chr3.4:4983641-4983660 | MS.gene51655:intron | 40.0% |
| ! | CTGATAATCTAGAGTTTGGC+CGG | - | chr3.4:4984339-4984358 | None:intergenic | 40.0% |
| ! | GGGATTCGGTTAATTGGTAA+AGG | - | chr3.4:4982577-4982596 | None:intergenic | 40.0% |
| ! | TTGTATGGTGATTTGTGCCA+TGG | + | chr3.4:4983755-4983774 | MS.gene51655:intron | 40.0% |
| !! | CCTGGTGCTATTATCATTGA+TGG | + | chr3.4:4982055-4982074 | MS.gene51655:CDS | 40.0% |
| !! | TTGCACTGAGAGAGTTGATA+CGG | - | chr3.4:4982891-4982910 | None:intergenic | 40.0% |
| !!! | TCAAGTTTTGGAAAAGGCAG+TGG | + | chr3.4:4982972-4982991 | MS.gene51655:intron | 40.0% |
| AAAACAGTAGGGCGCATACT+TGG | - | chr3.4:4984648-4984667 | None:intergenic | 45.0% | |
| AACTGCATGTTTGCCAGGTT+TGG | + | chr3.4:4985835-4985854 | MS.gene51655:CDS | 45.0% | |
| AAGAACCCATGCAACACACA+GGG | - | chr3.4:4984854-4984873 | None:intergenic | 45.0% | |
| AAGAGTCTTGGCACAACTGT+TGG | - | chr3.4:4983504-4983523 | None:intergenic | 45.0% | |
| AAGGATCTGCAATTCACGGA+CGG | - | chr3.4:4981980-4981999 | None:intergenic | 45.0% | |
| AAGTTGTTGTCTCGATGCTC+TGG | - | chr3.4:4983922-4983941 | None:intergenic | 45.0% | |
| ACTTACACTCCAGCAAGATG+TGG | - | chr3.4:4985345-4985364 | None:intergenic | 45.0% | |
| AGAGTCATACCTCCTCCATA+CGG | + | chr3.4:4986336-4986355 | MS.gene51655:CDS | 45.0% | |
| AGCATTTATGACCTCTGCCA+AGG | + | chr3.4:4984151-4984170 | MS.gene51655:intron | 45.0% | |
| ATGGAGAATTGCCATTCTGC+AGG | + | chr3.4:4985764-4985783 | MS.gene51655:CDS | 45.0% | |
| ATTATCAGGCCCCTTTCTCT+GGG | + | chr3.4:4984351-4984370 | MS.gene51655:intron | 45.0% | |
| CAGGAACATTCAAGTCGAAC+AGG | - | chr3.4:4983965-4983984 | None:intergenic | 45.0% | |
| CCGGCTATTGCAAATTTGGT+TGG | + | chr3.4:4982172-4982191 | MS.gene51655:CDS | 45.0% | |
| CGGCCAAACTCTAGATTATC+AGG | + | chr3.4:4984337-4984356 | MS.gene51655:intron | 45.0% | |
| GATTACCAGGTGACAACGAT+TGG | + | chr3.4:4985786-4985805 | MS.gene51655:CDS | 45.0% | |
| GCAAATATGCTTGTCCATCG+GGG | + | chr3.4:4982196-4982215 | MS.gene51655:CDS | 45.0% | |
| GCCAAAGGATCTGCAATTCA+CGG | - | chr3.4:4981984-4982003 | None:intergenic | 45.0% | |
| GGTTCCGGCTATTGCAAATT+TGG | + | chr3.4:4982168-4982187 | MS.gene51655:CDS | 45.0% | |
| GTATTCGGTTCCCAGAGAAA+GGG | - | chr3.4:4984364-4984383 | None:intergenic | 45.0% | |
| GTTATGAGACAAGGGAAAGG+GGG | - | chr3.4:4982598-4982617 | None:intergenic | 45.0% | |
| TAGAAAACTCCTGCCATGCA+GGG | + | chr3.4:4983366-4983385 | MS.gene51655:intron | 45.0% | |
| TATGGCCTGGTGTAAACCTA+CGG | - | chr3.4:4985735-4985754 | None:intergenic | 45.0% | |
| TATTCGGTTCCCAGAGAAAG+GGG | - | chr3.4:4984363-4984382 | None:intergenic | 45.0% | |
| TCCGTGAATTGCAGATCCTT+TGG | + | chr3.4:4981980-4981999 | MS.gene51655:CDS | 45.0% | |
| TCTGTAGTCTTTCACGTTGC+AGG | + | chr3.4:4984225-4984244 | MS.gene51655:intron | 45.0% | |
| TTACATGCGGAAGATGAGCA+TGG | - | chr3.4:4983816-4983835 | None:intergenic | 45.0% | |
| TTATGAGACAAGGGAAAGGG+GGG | - | chr3.4:4982597-4982616 | None:intergenic | 45.0% | |
| TTGTACCAATCGTTGTCACC+TGG | - | chr3.4:4985794-4985813 | None:intergenic | 45.0% | |
| TTTCTCCCTGTGTGTTGCAT+GGG | + | chr3.4:4984846-4984865 | MS.gene51655:intron | 45.0% | |
| ! | AAAGGGGGGATTCGGTTAAT+TGG | - | chr3.4:4982583-4982602 | None:intergenic | 45.0% |
| ! | GCCAAAGACCTTTTAGCACA+TGG | + | chr3.4:4983470-4983489 | MS.gene51655:intron | 45.0% |
| ! | GGGCCTGATAATCTAGAGTT+TGG | - | chr3.4:4984343-4984362 | None:intergenic | 45.0% |
| ! | TAATCTAGAGTTTGGCCGGT+AGG | - | chr3.4:4984335-4984354 | None:intergenic | 45.0% |
| ! | TGGTTCGGAGCAAAGATGAT+TGG | + | chr3.4:4986372-4986391 | MS.gene51655:CDS | 45.0% |
| ! | TTGCCTCCTTTTTGATGTGC+AGG | + | chr3.4:4982757-4982776 | MS.gene51655:intron | 45.0% |
| ! | TTTTCTCCCTGTGTGTTGCA+TGG | + | chr3.4:4984845-4984864 | MS.gene51655:intron | 45.0% |
| !! | CATACGGTGTCGATACTCAA+TGG | + | chr3.4:4986352-4986371 | MS.gene51655:CDS | 45.0% |
| !! | CATTGAGTATCGACACCGTA+TGG | - | chr3.4:4986354-4986373 | None:intergenic | 45.0% |
| !! | GGTGTCGATACTCAATGGTT+CGG | + | chr3.4:4986357-4986376 | MS.gene51655:CDS | 45.0% |
| !! | TGCACTGAGAGAGTTGATAC+GGG | - | chr3.4:4982890-4982909 | None:intergenic | 45.0% |
| !! | AATAATAAATTTAATTCATA+AGG | + | chr3.4:4984723-4984742 | MS.gene51655:intron | 5.0% |
| !!! | ATTAATATTAATTTGTATTT+TGG | - | chr3.4:4982488-4982507 | None:intergenic | 5.0% |
| !!! | TGTTATATTATATTTTAATT+AGG | - | chr3.4:4982699-4982718 | None:intergenic | 5.0% |
| AACCTTCCCATAACCCTGCA+TGG | - | chr3.4:4983382-4983401 | None:intergenic | 50.0% | |
| AAGGACTGGGAGAGACCATT+TGG | - | chr3.4:4982558-4982577 | None:intergenic | 50.0% | |
| AAGGTCGGTGTGGAAGTTGT+GGG | + | chr3.4:4984983-4985002 | MS.gene51655:CDS | 50.0% | |
| ACTGGGAGAGACCATTTGGA+AGG | - | chr3.4:4982554-4982573 | None:intergenic | 50.0% | |
| AGTAATGCGTAAGGTCGGTG+TGG | + | chr3.4:4984973-4984992 | MS.gene51655:CDS | 50.0% | |
| ATTGCAGATCCTTTGGCCAG+AGG | + | chr3.4:4981987-4982006 | MS.gene51655:CDS | 50.0% | |
| CACCTGGTAATCCTGCAGAA+TGG | - | chr3.4:4985778-4985797 | None:intergenic | 50.0% | |
| CGTATTCGGTTCCCAGAGAA+AGG | - | chr3.4:4984365-4984384 | None:intergenic | 50.0% | |
| CTAGAAAACTCCTGCCATGC+AGG | + | chr3.4:4983365-4983384 | MS.gene51655:intron | 50.0% | |
| CTGGGAGAGACCATTTGGAA+GGG | - | chr3.4:4982553-4982572 | None:intergenic | 50.0% | |
| GAAGAACCCATGCAACACAC+AGG | - | chr3.4:4984855-4984874 | None:intergenic | 50.0% | |
| GATTATCAGGCCCCTTTCTC+TGG | + | chr3.4:4984350-4984369 | MS.gene51655:intron | 50.0% | |
| TAAGGTCGGTGTGGAAGTTG+TGG | + | chr3.4:4984982-4985001 | MS.gene51655:CDS | 50.0% | |
| TCTTGGTATAGGCAAGCCGT+AGG | + | chr3.4:4985716-4985735 | MS.gene51655:intron | 50.0% | |
| TGCCATTCTGCAGGATTACC+AGG | + | chr3.4:4985773-4985792 | MS.gene51655:CDS | 50.0% | |
| TGGTTGACAGCACAAACAGC+AGG | - | chr3.4:4983984-4984003 | None:intergenic | 50.0% | |
| TTGATTTCTCGGCAGGATGC+AGG | + | chr3.4:4983648-4983667 | MS.gene51655:intron | 50.0% | |
| ! | GCTCTGGCTGATTCAGTATC+TGG | - | chr3.4:4983906-4983925 | None:intergenic | 50.0% |
| ! | GGGGCGATCTGCAACATTTT+TGG | + | chr3.4:4982215-4982234 | MS.gene51655:CDS | 50.0% |
| ! | GTTTTTGCTCAAGGCGGTTC+CGG | + | chr3.4:4982153-4982172 | MS.gene51655:intron | 50.0% |
| ! | TGCTGTTTGTGCTGTCAACC+AGG | + | chr3.4:4983983-4984002 | MS.gene51655:CDS | 50.0% |
| !! | CACTGTTCGCGCTTTGAAAG+AGG | + | chr3.4:4985081-4985100 | MS.gene51655:CDS | 50.0% |
| !! | CTGGGAGCACTGAAAGTTAC+AGG | + | chr3.4:4985007-4985026 | MS.gene51655:CDS | 50.0% |
| !! | GCACTGAGAGAGTTGATACG+GGG | - | chr3.4:4982889-4982908 | None:intergenic | 50.0% |
| !! | TGAGTATCGACACCGTATGG+AGG | - | chr3.4:4986351-4986370 | None:intergenic | 50.0% |
| AATGTTGCAGATCGCCCCGA+TGG | - | chr3.4:4982213-4982232 | None:intergenic | 55.0% | |
| ACTCCTGCCATGCAGGGTTA+TGG | + | chr3.4:4983372-4983391 | MS.gene51655:intron | 55.0% | |
| CCAGGCCATAGCTCGTTGTA+TGG | + | chr3.4:4985745-4985764 | MS.gene51655:CDS | 55.0% | |
| CCATACAACGAGCTATGGCC+TGG | - | chr3.4:4985748-4985767 | None:intergenic | 55.0% | |
| CTCCTGCCATGCAGGGTTAT+GGG | + | chr3.4:4983373-4983392 | MS.gene51655:intron | 55.0% | |
| GACAAGGGAAAGGGGGGATT+CGG | - | chr3.4:4982591-4982610 | None:intergenic | 55.0% | |
| GCAAGCCGTAGGTTTACACC+AGG | + | chr3.4:4985727-4985746 | MS.gene51655:CDS | 55.0% | |
| GCATGTTTGCCAGGTTTGGC+AGG | + | chr3.4:4985839-4985858 | MS.gene51655:CDS | 55.0% | |
| GGAGGAACTGCATGTTTGCC+AGG | + | chr3.4:4985830-4985849 | MS.gene51655:CDS | 55.0% | |
| GGAGGAACTTCCAAGCTCGT+TGG | - | chr3.4:4985520-4985539 | None:intergenic | 55.0% | |
| GGTGTGGAAGTTGTGGGACT+GGG | + | chr3.4:4984989-4985008 | MS.gene51655:CDS | 55.0% | |
| TGCCATGCAGGGTTATGGGA+AGG | + | chr3.4:4983377-4983396 | MS.gene51655:intron | 55.0% | |
| TTCCCATAACCCTGCATGGC+AGG | - | chr3.4:4983378-4983397 | None:intergenic | 55.0% | |
| ! | GTATCGACACCGTATGGAGG+AGG | - | chr3.4:4986348-4986367 | None:intergenic | 55.0% |
| CGGTGTGGAAGTTGTGGGAC+TGG | + | chr3.4:4984988-4985007 | MS.gene51655:CDS | 60.0% | |
| GGTCAGAGAGCTCAGGTTCC+TGG | + | chr3.4:4982037-4982056 | MS.gene51655:CDS | 60.0% | |
| TGAATGACAGCTGGGGCCTC+TGG | - | chr3.4:4982006-4982025 | None:intergenic | 60.0% | |
| CAGCTGGGGCCTCTGGCCAA+AGG | - | chr3.4:4981999-4982018 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 4981956 | 4986419 | 4981956 | ID=MS.gene51655 |
| chr3.4 | mRNA | 4981956 | 4986419 | 4981956 | ID=MS.gene51655.t1;Parent=MS.gene51655 |
| chr3.4 | exon | 4981956 | 4982076 | 4981956 | ID=MS.gene51655.t1.exon1;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4981956 | 4982076 | 4981956 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4982166 | 4982236 | 4982166 | ID=MS.gene51655.t1.exon2;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4982166 | 4982236 | 4982166 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4982779 | 4982846 | 4982779 | ID=MS.gene51655.t1.exon3;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4982779 | 4982846 | 4982779 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4983663 | 4983724 | 4983663 | ID=MS.gene51655.t1.exon4;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4983663 | 4983724 | 4983663 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4983907 | 4984004 | 4983907 | ID=MS.gene51655.t1.exon5;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4983907 | 4984004 | 4983907 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4984567 | 4984648 | 4984567 | ID=MS.gene51655.t1.exon6;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4984567 | 4984648 | 4984567 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4984960 | 4985102 | 4984960 | ID=MS.gene51655.t1.exon7;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4984960 | 4985102 | 4984960 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4985207 | 4985358 | 4985207 | ID=MS.gene51655.t1.exon8;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4985207 | 4985358 | 4985207 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4985727 | 4985860 | 4985727 | ID=MS.gene51655.t1.exon9;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4985727 | 4985860 | 4985727 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| chr3.4 | exon | 4986280 | 4986419 | 4986280 | ID=MS.gene51655.t1.exon10;Parent=MS.gene51655.t1 |
| chr3.4 | CDS | 4986280 | 4986419 | 4986280 | ID=cds.MS.gene51655.t1;Parent=MS.gene51655.t1 |
| Gene Sequence |
| Protein sequence |
