AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059609


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059609.t1 MTR_6g488100 96.141 311 10 2 1 310 14 323 0.0 612
MS.gene059609.t1 MTR_6g488100 94.937 316 9 3 1 310 14 328 0.0 607
MS.gene059609.t1 MTR_6g488100 96.047 253 9 1 1 252 14 266 0.0 503
MS.gene059609.t1 MTR_6g488100 96.234 239 8 1 1 238 14 252 2.80e-170 473
MS.gene059609.t1 MTR_8g103065 61.471 340 78 15 1 307 15 334 2.77e-119 346
MS.gene059609.t1 MTR_2g101520 48.547 344 124 11 1 307 1 328 3.57e-90 272
MS.gene059609.t1 MTR_8g103065 57.252 262 63 13 1 233 15 256 4.32e-78 239
MS.gene059609.t1 MTR_2g081820 43.931 173 71 2 134 306 288 434 2.05e-36 135
MS.gene059609.t1 MTR_2g081820 43.931 173 71 2 134 306 287 433 2.10e-36 135
MS.gene059609.t1 MTR_2g011070 45.509 167 62 4 144 309 276 414 5.49e-36 134
MS.gene059609.t1 MTR_1g107185 50.345 145 57 3 159 303 138 267 5.54e-34 125
MS.gene059609.t1 MTR_3g112170 40.415 193 76 4 130 306 283 452 7.22e-34 129
MS.gene059609.t1 MTR_8g466800 42.945 163 67 2 144 306 305 441 4.76e-32 124
MS.gene059609.t1 MTR_1g094085 42.857 161 63 4 153 310 399 533 4.92e-30 119
MS.gene059609.t1 MTR_4g087300 36.413 184 80 3 119 302 4 150 4.34e-26 101
MS.gene059609.t1 MTR_4g087300 37.975 158 63 2 145 302 5 127 8.76e-25 97.8
MS.gene059609.t1 MTR_4g087300 36.413 184 78 4 119 302 4 148 3.83e-24 96.7
MS.gene059609.t1 MTR_8g466800 56.471 85 37 0 144 228 305 389 4.56e-22 95.9
MS.gene059609.t1 MTR_1g094085 37.168 113 44 3 199 310 423 509 1.18e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059609.t1 AT4G29100 44.444 396 129 14 1 309 15 406 6.66e-85 261
MS.gene059609.t1 AT2G20100 61.538 169 55 2 147 305 190 358 1.88e-60 197
MS.gene059609.t1 AT4G29100 40.841 333 112 13 1 252 15 343 5.78e-54 180
MS.gene059609.t1 AT2G20100 48.372 215 55 3 147 305 190 404 2.07e-51 174
MS.gene059609.t1 AT2G20100 63.303 109 37 1 147 252 190 298 3.30e-35 130
MS.gene059609.t1 AT2G20100 63.303 109 37 1 147 252 190 298 3.30e-35 130
MS.gene059609.t1 AT3G19500 47.973 148 49 3 159 306 140 259 4.77e-33 123
MS.gene059609.t1 AT1G61660 46.753 154 58 4 157 310 261 390 4.85e-33 125
MS.gene059609.t1 AT1G61660 46.753 154 58 4 157 310 264 393 5.76e-33 125
MS.gene059609.t1 AT1G61660 46.753 154 58 4 157 310 264 393 5.76e-33 125
MS.gene059609.t1 AT1G27660 51.408 142 36 4 151 287 310 423 1.39e-31 122
MS.gene059609.t1 AT3G20640 43.114 167 63 4 145 306 250 389 5.32e-31 120
MS.gene059609.t1 AT3G20640 43.114 167 63 4 145 306 312 451 6.71e-31 120
MS.gene059609.t1 AT2G31730 45.038 131 37 3 173 303 39 134 4.09e-27 104
MS.gene059609.t1 AT2G31730 45.038 131 37 3 173 303 39 134 4.09e-27 104
MS.gene059609.t1 AT1G05710 40.909 132 41 2 173 303 37 132 7.37e-25 98.2
MS.gene059609.t1 AT1G05710 40.909 132 41 2 173 303 37 132 7.37e-25 98.2
MS.gene059609.t1 AT1G05710 40.909 132 41 2 173 303 37 132 7.37e-25 98.2
MS.gene059609.t1 AT1G05710 40.909 132 41 2 173 303 37 132 7.37e-25 98.2
MS.gene059609.t1 AT1G05710 40.909 132 41 2 173 303 37 132 7.37e-25 98.2
MS.gene059609.t1 AT1G05710 40.909 132 41 2 173 303 37 132 7.37e-25 98.2
MS.gene059609.t1 AT1G05710 40.909 132 41 2 173 303 37 132 7.37e-25 98.2
MS.gene059609.t1 AT1G05710 40.909 132 41 2 173 303 29 124 7.40e-25 97.8
MS.gene059609.t1 AT1G05710 44.361 133 57 5 173 303 29 146 8.85e-25 98.2
MS.gene059609.t1 AT1G05710 44.361 133 57 5 173 303 29 146 8.85e-25 98.2
MS.gene059609.t1 AT1G05710 44.361 133 57 5 173 303 37 154 1.07e-24 98.2
MS.gene059609.t1 AT1G05710 44.361 133 57 5 173 303 37 154 1.07e-24 98.2
MS.gene059609.t1 AT1G05710 44.361 133 57 5 173 303 37 154 1.07e-24 98.2
MS.gene059609.t1 AT1G05710 44.361 133 57 5 173 303 37 154 1.07e-24 98.2
MS.gene059609.t1 AT4G21340 46.309 149 55 6 144 289 161 287 2.67e-24 100
MS.gene059609.t1 AT1G31050 40.606 165 60 5 154 310 300 434 5.40e-24 101
MS.gene059609.t1 AT1G31050 40.606 165 60 5 154 310 304 438 6.27e-24 101
MS.gene059609.t1 AT1G31050 40.741 162 58 5 154 307 300 431 4.93e-23 99.0
MS.gene059609.t1 AT4G05170 44.531 128 56 3 158 285 40 152 7.43e-23 93.6
MS.gene059609.t1 AT4G05170 34.454 238 110 8 51 285 76 270 9.95e-23 96.3
MS.gene059609.t1 AT4G05170 44.531 128 56 3 158 285 133 245 1.36e-22 95.1
MS.gene059609.t1 AT4G05170 34.167 240 108 9 51 285 94 288 1.62e-22 95.9
MS.gene059609.t1 AT1G61660 62.162 74 28 0 157 230 264 337 2.62e-21 93.2
MS.gene059609.t1 AT1G61660 62.162 74 28 0 157 230 264 337 2.62e-21 93.2
MS.gene059609.t1 AT1G49830 42.623 122 41 2 183 304 134 226 4.74e-21 90.5
MS.gene059609.t1 AT1G49830 42.623 122 41 2 183 304 133 225 4.95e-21 90.5
MS.gene059609.t1 AT4G05170 38.857 175 76 6 51 222 76 222 7.17e-21 89.7
MS.gene059609.t1 AT3G19500 61.765 68 26 0 159 226 140 207 3.30e-20 87.8
MS.gene059609.t1 AT3G20640 53.933 89 35 2 145 228 312 399 9.44e-20 89.4
MS.gene059609.t1 AT4G05170 38.462 169 73 6 51 216 76 216 1.08e-19 86.3
MS.gene059609.t1 AT4G05170 38.462 169 73 6 51 216 76 216 1.08e-19 86.3
MS.gene059609.t1 AT1G61660 32.821 195 93 7 116 310 215 371 1.99e-18 85.1
MS.gene059609.t1 AT3G20640 54.545 77 29 2 145 216 312 387 1.13e-15 77.4
MS.gene059609.t1 AT1G31050 53.030 66 30 1 154 218 300 365 7.43e-12 65.9
MS.gene059609.t1 AT1G31050 53.030 66 30 1 154 218 304 369 8.12e-12 65.9

Find 85 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAAGTTGGTGCATAATT+AGG 0.122725 6.4:+60876773 None:intergenic
TTATTGATGTTCCACCAATT+AGG 0.248969 6.4:+60876857 None:intergenic
TGGTTATATCAGATTCCTTC+AGG 0.271543 6.4:-60874142 MS.gene059609:CDS
ATGACAATGGAGCTGATTAT+TGG 0.285895 6.4:-60871980 MS.gene059609:CDS
CCTGATCCATTGCTCAAGTA+TGG 0.288564 6.4:+60873938 None:intergenic
CATCAGCTTGTTTCCCCATT+TGG 0.289480 6.4:-60874970 MS.gene059609:CDS
ATTACCTGACCAGGGTCTTC+AGG 0.299545 6.4:+60872859 None:intergenic
TTACAGCTCCTAAATGAAAA+TGG 0.304202 6.4:-60872623 MS.gene059609:intron
TGATGGCTAGTAACCCTAAT+TGG 0.323527 6.4:-60876871 MS.gene059609:CDS
TATTGATGTTCCACCAATTA+GGG 0.326053 6.4:+60876858 None:intergenic
ATGAAGTTGGTGCATAATTA+GGG 0.328916 6.4:+60876774 None:intergenic
GACACAACCCTCTACTCTTT+AGG 0.346736 6.4:+60872036 None:intergenic
CAGGTTAGGAAGGAGAAGTT+AGG 0.364935 6.4:-60875012 MS.gene059609:CDS
GAAAATAAAGGAGGAGGTTG+TGG 0.373125 6.4:+60876818 None:intergenic
TTAGAAGGAGATGAAAATAA+AGG 0.374150 6.4:+60876806 None:intergenic
TCTGTCTTGTTAGAAGCTAT+TGG 0.377963 6.4:-60874162 MS.gene059609:CDS
AATTAATTACCTTTCCAAAT+GGG 0.386503 6.4:+60874956 None:intergenic
AGTTGTTGACTCCATGGTTC+GGG 0.390425 6.4:+60876707 None:intergenic
ACATCAACAAGAGAAGCATT+TGG 0.400442 6.4:+60876165 None:intergenic
ACTTGTAGTGTACATGATAC+TGG 0.401193 6.4:+60872008 None:intergenic
TTAGGGTTGAGAAAGTTAGA+AGG 0.407564 6.4:+60876791 None:intergenic
TGACAATGGAGCTGATTATT+GGG 0.408868 6.4:-60871979 MS.gene059609:CDS
CCCTAGGAGGAGGAGGCTTT+CGG 0.409114 6.4:-60871950 MS.gene059609:CDS
TACAACTCAAACTACTTTCA+AGG 0.412851 6.4:-60875308 MS.gene059609:intron
TAATTAATTACCTTTCCAAA+TGG 0.416474 6.4:+60874955 None:intergenic
TAATTATTTAATTAGGTTCA+AGG 0.418794 6.4:-60872901 MS.gene059609:intron
AATTGAAGGGGTGGAATTGT+GGG 0.425149 6.4:-60876246 MS.gene059609:intron
GAGTTGTTGACTCCATGGTT+CGG 0.439817 6.4:+60876706 None:intergenic
TAATTGAAGGGGTGGAATTG+TGG 0.447002 6.4:-60876247 MS.gene059609:intron
AAAGGAAGAAAAGATGAAGT+TGG 0.451016 6.4:+60876761 None:intergenic
AAAGGAGGAGGTTGTGGAGA+TGG 0.454745 6.4:+60876824 None:intergenic
GCACCTGCCCTAGGAGGAGG+AGG 0.461982 6.4:-60871957 MS.gene059609:CDS
AAGTGTAACAGTTCTGCATC+TGG 0.468089 6.4:-60875364 MS.gene059609:CDS
AAATACAAGGCAACCACATT+CGG 0.472873 6.4:-60873915 MS.gene059609:intron
TTACCTGACCAGGGTCTTCA+GGG 0.475060 6.4:+60872860 None:intergenic
ACCGAAAGCCTCCTCCTCCT+AGG 0.478830 6.4:+60871949 None:intergenic
CCATACTTGAGCAATGGATC+AGG 0.481859 6.4:-60873938 MS.gene059609:CDS
ATTAATTACCTTTCCAAATG+GGG 0.483813 6.4:+60874957 None:intergenic
GGTTATATCAGATTCCTTCA+GGG 0.485572 6.4:-60874141 MS.gene059609:CDS
AAGAAGAACCTAAAGAGTAG+AGG 0.486812 6.4:-60872044 MS.gene059609:CDS
TCAGGAAATAGCTATGCATA+TGG 0.501689 6.4:-60876129 MS.gene059609:CDS
ATTCCCTGAAGACCCTGGTC+AGG 0.501966 6.4:-60872863 MS.gene059609:intron
TTCTCAATTTCAGGTTAGGA+AGG 0.504978 6.4:-60875022 MS.gene059609:intron
GATTATTGGGCACCTGCCCT+AGG 0.505746 6.4:-60871966 MS.gene059609:CDS
TTTCAACAACAACAACATGT+TGG 0.505959 6.4:-60876070 MS.gene059609:CDS
ATGGGGAAACAAGCTGATGA+AGG 0.508848 6.4:+60874974 None:intergenic
ATTCCTTCAGGGTCAAATTG+AGG 0.512155 6.4:-60874130 MS.gene059609:intron
AGCTTACCATACTTGAGCAA+TGG 0.512974 6.4:-60873944 MS.gene059609:CDS
AAGGGGTGGAATTGTGGGAG+AGG 0.513254 6.4:-60876241 MS.gene059609:CDS
TGGGCACCTGCCCTAGGAGG+AGG 0.520166 6.4:-60871960 MS.gene059609:CDS
ATATTAATTCTTACCGAATG+TGG 0.522777 6.4:+60873902 None:intergenic
GGAGATGAAAATAAAGGAGG+AGG 0.522950 6.4:+60876812 None:intergenic
GTGGGAGAGGAAGATAAGAT+TGG 0.524644 6.4:-60876228 MS.gene059609:CDS
TATCATGTACACTACAAGTT+GGG 0.530955 6.4:-60872004 MS.gene059609:CDS
ATCCAAAGGATTACCTGACC+AGG 0.531475 6.4:+60872850 None:intergenic
GATGTTAAACAAGAAAGCTC+AGG 0.533379 6.4:-60876147 MS.gene059609:CDS
AAGCCTCCTCCTCCTAGGGC+AGG 0.533559 6.4:+60871954 None:intergenic
TACATGAGTTGTTGACTCCA+TGG 0.541593 6.4:+60876701 None:intergenic
AGAAGAACCTAAAGAGTAGA+GGG 0.543329 6.4:-60872043 MS.gene059609:CDS
CCGAAAGCCTCCTCCTCCTA+GGG 0.547448 6.4:+60871950 None:intergenic
GAAGAGGAAAGCAGCTGAAG+AGG 0.551673 6.4:-60872597 MS.gene059609:intron
GAAGGAGATGAAAATAAAGG+AGG 0.562051 6.4:+60876809 None:intergenic
GCTTGTTTCCCCATTTGGAA+AGG 0.570374 6.4:-60874965 MS.gene059609:intron
ATCAAGAGCTTCCCGAACCA+TGG 0.573656 6.4:-60876718 MS.gene059609:CDS
GTAACAGTTCTGCATCTGGT+GGG 0.576642 6.4:-60875360 MS.gene059609:CDS
TGTTTATTCCCTGAAGACCC+TGG 0.579599 6.4:-60872868 MS.gene059609:CDS
TGTAACAGTTCTGCATCTGG+TGG 0.591294 6.4:-60875361 MS.gene059609:CDS
TAAATGAAAATGGCTTGAAG+AGG 0.592480 6.4:-60872613 MS.gene059609:CDS
TGGCTAGTAACCCTAATTGG+TGG 0.593806 6.4:-60876868 MS.gene059609:CDS
GGAGGAGGTTGTGGAGATGG+TGG 0.593961 6.4:+60876827 None:intergenic
TAACAGTTCTGCATCTGGTG+GGG 0.597084 6.4:-60875359 MS.gene059609:CDS
GTATCATGTACACTACAAGT+TGG 0.599973 6.4:-60872005 MS.gene059609:CDS
TCACCTCAATTTGACCCTGA+AGG 0.601592 6.4:+60874127 None:intergenic
TGGGGAAACAAGCTGATGAA+GGG 0.608733 6.4:+60874975 None:intergenic
TATTGGGCACCTGCCCTAGG+AGG 0.619502 6.4:-60871963 MS.gene059609:CDS
AATAGCTATGCATATGGACA+TGG 0.627229 6.4:-60876123 MS.gene059609:CDS
ACCTCAGAAGATCGATCTAG+TGG 0.628411 6.4:+60876006 None:intergenic
CTACAAGTTGGGAATGACAA+TGG 0.634609 6.4:-60871993 MS.gene059609:CDS
ACCACTAGATCGATCTTCTG+AGG 0.634967 6.4:-60876007 MS.gene059609:intron
TCAGAAGATCGATCTAGTGG+TGG 0.660060 6.4:+60876009 None:intergenic
TCCAAAGGATTACCTGACCA+GGG 0.669498 6.4:+60872851 None:intergenic
ACAATAGTAATATAGATGTG+AGG 0.676915 6.4:-60876035 MS.gene059609:CDS
GGTGGAACATCAATAACATG+AGG 0.683914 6.4:-60876850 MS.gene059609:CDS
GCAATGGATCAGGAAATACA+AGG 0.690176 6.4:-60873928 MS.gene059609:CDS
AATAGCTTCTAACAAGACAG+AGG 0.708748 6.4:+60874164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGTTATAAATTAAAG+TGG - chr6.4:60874033-60874052 MS.gene059609:intron 10.0%
!! ATATATGAATAATAAAAACA+AGG - chr6.4:60876078-60876097 MS.gene059609:CDS 10.0%
!! ATGATTGTAATTATTTAATT+AGG - chr6.4:60875911-60875930 MS.gene059609:intron 10.0%
!! ATTTATAAAAAAGAATTAGA+GGG + chr6.4:60875362-60875381 None:intergenic 10.0%
!! TATATGAATAATAAAAACAA+GGG - chr6.4:60876079-60876098 MS.gene059609:CDS 10.0%
!!! AAAATCTAATTAATTGTTTT+TGG - chr6.4:60872548-60872567 MS.gene059609:intron 10.0%
!!! ATAATCACTATTTTTTTTTA+AGG - chr6.4:60872158-60872177 MS.gene059609:intron 10.0%
!!! TAATCACTATTTTTTTTTAA+GGG - chr6.4:60872159-60872178 MS.gene059609:intron 10.0%
!!! TTGCATATATAATTTTATAT+TGG + chr6.4:60873063-60873082 None:intergenic 10.0%
!!! TTTTTTTTTTTTGATGAAAT+TGG + chr6.4:60875043-60875062 None:intergenic 10.0%
!! AATTTCTTATTGAATAAACT+AGG + chr6.4:60873892-60873911 None:intergenic 15.0%
!! ATATGAATAATAAAAACAAG+GGG - chr6.4:60876080-60876099 MS.gene059609:CDS 15.0%
!! CATTTATAAAAAAGAATTAG+AGG + chr6.4:60875363-60875382 None:intergenic 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG - chr6.4:60876434-60876453 MS.gene059609:intron 15.0%
!! TAATTAAATATTGTAAAGCA+TGG + chr6.4:60873022-60873041 None:intergenic 15.0%
!! TAATTATTTAATTAGGTTCA+AGG - chr6.4:60875918-60875937 MS.gene059609:intron 15.0%
!!! AATCAAAGACAATAATTTTT+TGG + chr6.4:60876633-60876652 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr6.4:60876474-60876493 MS.gene059609:intron 15.0%
!!! TAACTTTTTCTAATAAAGTA+AGG + chr6.4:60876356-60876375 None:intergenic 15.0%
!!! TTATATGCTTTTTAATAGAA+AGG - chr6.4:60873914-60873933 MS.gene059609:intron 15.0%
!! AAAAATTTCTTCATGTATTG+TGG - chr6.4:60873167-60873186 MS.gene059609:intron 20.0%
!! AAAATTTCTTCATGTATTGT+GGG - chr6.4:60873168-60873187 MS.gene059609:intron 20.0%
!! AAATGGAATGAAATAATCAT+TGG - chr6.4:60876307-60876326 MS.gene059609:intron 20.0%
!! AAATGTTATGGATAATTATG+TGG - chr6.4:60875875-60875894 MS.gene059609:intron 20.0%
!! AATCACTACTAAATTAGTAA+GGG - chr6.4:60872187-60872206 MS.gene059609:intron 20.0%
!! AATTAATTACCTTTCCAAAT+GGG + chr6.4:60873866-60873885 None:intergenic 20.0%
!! ACATTTCTCTTTAGTTATAA+TGG + chr6.4:60875995-60876014 None:intergenic 20.0%
!! ATGTATAATATTCACCATAA+TGG + chr6.4:60872376-60872395 None:intergenic 20.0%
!! ATTGCATTATATATAGAAAG+TGG - chr6.4:60874578-60874597 MS.gene059609:intron 20.0%
!! GAATCAAAGAATTGAATAAT+TGG + chr6.4:60875245-60875264 None:intergenic 20.0%
!! TAATTAATTACCTTTCCAAA+TGG + chr6.4:60873867-60873886 None:intergenic 20.0%
!! TATATTAAATCTGATAAAGC+TGG + chr6.4:60876020-60876039 None:intergenic 20.0%
!! TGTAGTAGCAAATAAATTAA+AGG + chr6.4:60874379-60874398 None:intergenic 20.0%
!! TTTCATTTAAGAATTGAACT+TGG + chr6.4:60875109-60875128 None:intergenic 20.0%
!!! AATAATGCTTATTTTTACGA+AGG + chr6.4:60875736-60875755 None:intergenic 20.0%
!!! AATTTTTTCTCTAATAGTGA+TGG + chr6.4:60874139-60874158 None:intergenic 20.0%
!!! CTATATTTTGTTGTTGTATT+AGG + chr6.4:60873728-60873747 None:intergenic 20.0%
!!! TCATATTACCTTTTTTTTCT+TGG - chr6.4:60872924-60872943 MS.gene059609:intron 20.0%
!!! TTAGCATTTGATTTTGAAAT+TGG + chr6.4:60872623-60872642 None:intergenic 20.0%
!!! TTATTTTTGATATATTGTCG+AGG + chr6.4:60875504-60875523 None:intergenic 20.0%
!!! TTTTGGTCTCTAATTTTTAT+TGG + chr6.4:60876616-60876635 None:intergenic 20.0%
!!! TTTTTAGCTTGAAATCATAA+GGG - chr6.4:60873109-60873128 MS.gene059609:intron 20.0%
!!! TTTTTTAGCTTGAAATCATA+AGG - chr6.4:60873108-60873127 MS.gene059609:intron 20.0%
! AAAATTCAAACGTATGTGTT+TGG - chr6.4:60872509-60872528 MS.gene059609:intron 25.0%
! AAAGATAAGTGCCAAATATT+AGG - chr6.4:60875567-60875586 MS.gene059609:intron 25.0%
! AAATTAAAGGATCGTGTTAA+CGG + chr6.4:60874366-60874385 None:intergenic 25.0%
! AAATTAAGGCAAATGTGAAA+TGG + chr6.4:60874781-60874800 None:intergenic 25.0%
! AAATTTCTTCATGTATTGTG+GGG - chr6.4:60873169-60873188 MS.gene059609:intron 25.0%
! AACTTGAAGAACACAAATTA+AGG + chr6.4:60874795-60874814 None:intergenic 25.0%
! AATGAATAATTGAACTCAAG+TGG - chr6.4:60875013-60875032 MS.gene059609:intron 25.0%
! AATTCCAAAGTTAGGAAAAA+AGG + chr6.4:60874843-60874862 None:intergenic 25.0%
! ACAATAGTAATATAGATGTG+AGG - chr6.4:60872784-60872803 MS.gene059609:intron 25.0%
! ACATGTTGTGTTAAAATCAA+GGG - chr6.4:60875677-60875696 MS.gene059609:intron 25.0%
! ACATTCGGTAAGAATTAATA+TGG - chr6.4:60874919-60874938 MS.gene059609:intron 25.0%
! ATACTTATATTGTTCATCAG+AGG - chr6.4:60875308-60875327 MS.gene059609:intron 25.0%
! ATATTAATTCTTACCGAATG+TGG + chr6.4:60874920-60874939 None:intergenic 25.0%
! ATCACTACTAAATTAGTAAG+GGG - chr6.4:60872188-60872207 MS.gene059609:intron 25.0%
! ATTAATTACCTTTCCAAATG+GGG + chr6.4:60873865-60873884 None:intergenic 25.0%
! ATTATATATGCAATCGTGAA+AGG - chr6.4:60873070-60873089 MS.gene059609:intron 25.0%
! CAATCACTACTAAATTAGTA+AGG - chr6.4:60872186-60872205 MS.gene059609:intron 25.0%
! CATTAAATGACAACTCATTT+AGG - chr6.4:60875078-60875097 MS.gene059609:intron 25.0%
! GAAAAAAAGCTTCTTCATTA+AGG - chr6.4:60872876-60872895 MS.gene059609:CDS 25.0%
! GAATAATTGCAATTGAGAAT+TGG + chr6.4:60873643-60873662 None:intergenic 25.0%
! GATTTCAAGCTAAAAAAGAT+TGG + chr6.4:60873105-60873124 None:intergenic 25.0%
! TAAGTAAAGTCAATTGAAAC+TGG + chr6.4:60875132-60875151 None:intergenic 25.0%
! TACTTATATTGTTCATCAGA+GGG - chr6.4:60875309-60875328 MS.gene059609:CDS 25.0%
! TTAGAAGGAGATGAAAATAA+AGG + chr6.4:60872016-60872035 None:intergenic 25.0%
! TTGTAGAATGAAAGAAATCT+TGG + chr6.4:60873437-60873456 None:intergenic 25.0%
!! AAGAACTATGACAATTTTTG+TGG + chr6.4:60874967-60874986 None:intergenic 25.0%
!! AGAACTATGACAATTTTTGT+GGG + chr6.4:60874966-60874985 None:intergenic 25.0%
!!! AAAAATGTAGTTTGTTCCTT+TGG - chr6.4:60875646-60875665 MS.gene059609:intron 25.0%
!!! AATTGTTTTTGGCTAATTGA+AGG - chr6.4:60872559-60872578 MS.gene059609:intron 25.0%
!!! ATTGTTTTTGGCTAATTGAA+GGG - chr6.4:60872560-60872579 MS.gene059609:intron 25.0%
!!! GTTTTTTTTGTTCCCTATTT+TGG + chr6.4:60874005-60874024 None:intergenic 25.0%
!!! TCTTATGTGTTTTTTCATGT+TGG - chr6.4:60876720-60876739 MS.gene059609:CDS 25.0%
!!! TTGTTTAAAGGTGCTAATAT+TGG + chr6.4:60872994-60873013 None:intergenic 25.0%
!!! TTTAGTTATAATGGATCCAA+AGG + chr6.4:60875986-60876005 None:intergenic 25.0%
!!! TTTCTGCATGATATTTTAGA+GGG - chr6.4:60874534-60874553 MS.gene059609:intron 25.0%
!!! TTTTAGCTTGAAATCATAAG+GGG - chr6.4:60873110-60873129 MS.gene059609:intron 25.0%
!!! TTTTCTGCATGATATTTTAG+AGG - chr6.4:60874533-60874552 MS.gene059609:intron 25.0%
AAACATACAAATACCATGTG+GGG - chr6.4:60873591-60873610 MS.gene059609:intron 30.0%
AAAGGAAGAAAAGATGAAGT+TGG + chr6.4:60872061-60872080 None:intergenic 30.0%
AAGATATCATGAAAACGTGT+AGG + chr6.4:60873776-60873795 None:intergenic 30.0%
AATTAAAGGATCGTGTTAAC+GGG + chr6.4:60874365-60874384 None:intergenic 30.0%
AATTGTTTCGTGTGTTTCTT+TGG - chr6.4:60875705-60875724 MS.gene059609:intron 30.0%
ACAAACATACAAATACCATG+TGG - chr6.4:60873589-60873608 MS.gene059609:intron 30.0%
ACGTATGTGTTTGGTTAATT+AGG - chr6.4:60872518-60872537 MS.gene059609:intron 30.0%
ACTTTAGATTACCAGAAAAC+TGG - chr6.4:60875164-60875183 MS.gene059609:intron 30.0%
AGCATGGTAAAGTTGTTTAA+AGG + chr6.4:60873006-60873025 None:intergenic 30.0%
ATATATAGAAAGTGGTGACT+AGG - chr6.4:60874586-60874605 MS.gene059609:intron 30.0%
ATGTGTTTGGTTAATTAGGA+AGG - chr6.4:60872522-60872541 MS.gene059609:intron 30.0%
ATTCATAAAAAGTCTAGCCA+TGG + chr6.4:60872904-60872923 None:intergenic 30.0%
CAAACATACAAATACCATGT+GGG - chr6.4:60873590-60873609 MS.gene059609:intron 30.0%
CACATGTTGTGTTAAAATCA+AGG - chr6.4:60875676-60875695 MS.gene059609:intron 30.0%
CATGTTGTGTTAAAATCAAG+GGG - chr6.4:60875678-60875697 MS.gene059609:intron 30.0%
CTCATTGACCAAGAAAAAAA+AGG + chr6.4:60872935-60872954 None:intergenic 30.0%
GATATCTTGTTCTCAATTTC+AGG - chr6.4:60873788-60873807 MS.gene059609:intron 30.0%
TAAATGAAAATGGCTTGAAG+AGG - chr6.4:60876206-60876225 MS.gene059609:CDS 30.0%
TAAGTGCCAAATATTAGGAA+AGG - chr6.4:60875572-60875591 MS.gene059609:intron 30.0%
TACAACTCAAACTACTTTCA+AGG - chr6.4:60873511-60873530 MS.gene059609:intron 30.0%
TATATTGTCGAGGATATTAG+AGG + chr6.4:60875494-60875513 None:intergenic 30.0%
TATCATGTACACTACAAGTT+GGG - chr6.4:60876815-60876834 MS.gene059609:CDS 30.0%
TATTGATGTTCCACCAATTA+GGG + chr6.4:60871964-60871983 None:intergenic 30.0%
TTACAGCTCCTAAATGAAAA+TGG - chr6.4:60876196-60876215 MS.gene059609:CDS 30.0%
TTAGTGACAAGAGATTTAGA+GGG - chr6.4:60872271-60872290 MS.gene059609:intron 30.0%
TTATTGATGTTCCACCAATT+AGG + chr6.4:60871965-60871984 None:intergenic 30.0%
TTGCATGTGCAAAAATGTTA+TGG - chr6.4:60875863-60875882 MS.gene059609:intron 30.0%
TTTCAACAACAACAACATGT+TGG - chr6.4:60872749-60872768 MS.gene059609:intron 30.0%
! CTTTTCTTCCTTTTTCTTCA+TGG - chr6.4:60872068-60872087 MS.gene059609:intron 30.0%
! GAACTATGACAATTTTTGTG+GGG + chr6.4:60874965-60874984 None:intergenic 30.0%
! GACTTGTTCTATAACCATTA+TGG - chr6.4:60872359-60872378 MS.gene059609:intron 30.0%
! GTGTTAATATTCCAGTTTTC+TGG + chr6.4:60875178-60875197 None:intergenic 30.0%
! TTTATTTGCTACTACATTCG+AGG - chr6.4:60874383-60874402 MS.gene059609:intron 30.0%
! TTTTCATGCCATGAAGAAAA+AGG + chr6.4:60872079-60872098 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr6.4:60876264-60876283 None:intergenic 30.0%
!! ATGAAGTTGGTGCATAATTA+GGG + chr6.4:60872048-60872067 None:intergenic 30.0%
!! CATGTTGGTGATAACTAATT+AGG - chr6.4:60876735-60876754 MS.gene059609:CDS 30.0%
!! TCTTCAAGCCATTTTCATTT+AGG + chr6.4:60876207-60876226 None:intergenic 30.0%
!! TTCCCTATTTTGGATTTAGT+GGG + chr6.4:60873995-60874014 None:intergenic 30.0%
!! TTCTGCATGATATTTTAGAG+GGG - chr6.4:60874535-60874554 MS.gene059609:intron 30.0%
!! TTTAGCTTGAAATCATAAGG+GGG - chr6.4:60873111-60873130 MS.gene059609:intron 30.0%
!!! TCATCCTTTTTTCCTAACTT+TGG - chr6.4:60874836-60874855 MS.gene059609:intron 30.0%
!!! TGCTTATTTTTACGAAGGTA+TGG + chr6.4:60875731-60875750 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr6.4:60876265-60876284 MS.gene059609:intron 30.0%
!!! TTGTTTTTGGCTAATTGAAG+GGG - chr6.4:60872561-60872580 MS.gene059609:intron 30.0%
AAAATGATATCGAGTGCTCT+TGG - chr6.4:60874206-60874225 MS.gene059609:intron 35.0%
AAAGTTTGAGAGGGTAAAGT+TGG - chr6.4:60876409-60876428 MS.gene059609:intron 35.0%
AAATACAAGGCAACCACATT+CGG - chr6.4:60874904-60874923 MS.gene059609:intron 35.0%
AAATGATATCGAGTGCTCTT+GGG - chr6.4:60874207-60874226 MS.gene059609:intron 35.0%
AAGAAGAACCTAAAGAGTAG+AGG - chr6.4:60876775-60876794 MS.gene059609:CDS 35.0%
AAGTGCACATGCTAAAAAGT+TGG + chr6.4:60873751-60873770 None:intergenic 35.0%
AATAGCTATGCATATGGACA+TGG - chr6.4:60872696-60872715 MS.gene059609:intron 35.0%
AATAGCTTCTAACAAGACAG+AGG + chr6.4:60874658-60874677 None:intergenic 35.0%
ACTTGTAGTGTACATGATAC+TGG + chr6.4:60876814-60876833 None:intergenic 35.0%
AGAAGAACCTAAAGAGTAGA+GGG - chr6.4:60876776-60876795 MS.gene059609:CDS 35.0%
AGGTATAATGCAAACTTCCA+TGG - chr6.4:60873531-60873550 MS.gene059609:intron 35.0%
ATCCCCACTAAATCCAAAAT+AGG - chr6.4:60873989-60874008 MS.gene059609:intron 35.0%
ATCCTTAAAGCTAAAAGCTC+AGG - chr6.4:60875437-60875456 MS.gene059609:intron 35.0%
ATGAAAGAGAGTTAAGGAGT+TGG + chr6.4:60873565-60873584 None:intergenic 35.0%
ATGACAATGGAGCTGATTAT+TGG - chr6.4:60876839-60876858 MS.gene059609:CDS 35.0%
GAAGGAGATGAAAATAAAGG+AGG + chr6.4:60872013-60872032 None:intergenic 35.0%
GATGTTAAACAAGAAAGCTC+AGG - chr6.4:60872672-60872691 MS.gene059609:intron 35.0%
GGAGTAACTATTGTCTTTCT+TGG - chr6.4:60873612-60873631 MS.gene059609:intron 35.0%
GGAGTTCCTTTCCTAATATT+TGG + chr6.4:60875581-60875600 None:intergenic 35.0%
GGTTATATCAGATTCCTTCA+GGG - chr6.4:60874678-60874697 MS.gene059609:intron 35.0%
GTATCATGTACACTACAAGT+TGG - chr6.4:60876814-60876833 MS.gene059609:CDS 35.0%
GTATGCATGAAAGAGAGTTA+AGG + chr6.4:60873571-60873590 None:intergenic 35.0%
GTTAGTGACAAGAGATTTAG+AGG - chr6.4:60872270-60872289 MS.gene059609:intron 35.0%
TAGTGACAAGAGATTTAGAG+GGG - chr6.4:60872272-60872291 MS.gene059609:intron 35.0%
TCAGGAAATAGCTATGCATA+TGG - chr6.4:60872690-60872709 MS.gene059609:intron 35.0%
TCCCCACTAAATCCAAAATA+GGG - chr6.4:60873990-60874009 MS.gene059609:intron 35.0%
TCCTTAAAGCTAAAAGCTCA+GGG - chr6.4:60875438-60875457 MS.gene059609:intron 35.0%
TGACAATGGAGCTGATTATT+GGG - chr6.4:60876840-60876859 MS.gene059609:CDS 35.0%
TGCTTGTGTTATGGTTGTTT+GGG + chr6.4:60874745-60874764 None:intergenic 35.0%
TGGTTATATCAGATTCCTTC+AGG - chr6.4:60874677-60874696 MS.gene059609:intron 35.0%
TGTGAGAGAAAAGTTTGAGA+GGG - chr6.4:60876400-60876419 MS.gene059609:intron 35.0%
TTACTAGTGCTTACTGCTTA+GGG + chr6.4:60874105-60874124 None:intergenic 35.0%
TTAGGGTTGAGAAAGTTAGA+AGG + chr6.4:60872031-60872050 None:intergenic 35.0%
TTGGCACACAGATTAAGAAA+TGG - chr6.4:60876290-60876309 MS.gene059609:intron 35.0%
TTTACTAGTGCTTACTGCTT+AGG + chr6.4:60874106-60874125 None:intergenic 35.0%
! AATTTTTGTGGGGTAAGTTG+AGG + chr6.4:60874955-60874974 None:intergenic 35.0%
! TCTGTCTTGTTAGAAGCTAT+TGG - chr6.4:60874657-60874676 MS.gene059609:intron 35.0%
! TGTTCATCAGAGGGTATAAA+TGG - chr6.4:60875318-60875337 MS.gene059609:CDS 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr6.4:60876500-60876519 MS.gene059609:intron 35.0%
!! ACATCAACAAGAGAAGCATT+TGG + chr6.4:60872657-60872676 None:intergenic 35.0%
!! ATATTTTAGAGGGGGGAAAA+AGG - chr6.4:60874544-60874563 MS.gene059609:intron 35.0%
!! ATTTTTGTGGGGTAAGTTGA+GGG + chr6.4:60874954-60874973 None:intergenic 35.0%
!! CTTGTTCTCAATTTCAGGTT+AGG - chr6.4:60873793-60873812 MS.gene059609:intron 35.0%
!! GATGAAGTTGGTGCATAATT+AGG + chr6.4:60872049-60872068 None:intergenic 35.0%
!! GTTCCCTATTTTGGATTTAG+TGG + chr6.4:60873996-60874015 None:intergenic 35.0%
!! TCCCTATTTTGGATTTAGTG+GGG + chr6.4:60873994-60874013 None:intergenic 35.0%
!! TCCTAACTTTGGAATTATGC+AGG - chr6.4:60874847-60874866 MS.gene059609:intron 35.0%
!! TCTGCATGATATTTTAGAGG+GGG - chr6.4:60874536-60874555 MS.gene059609:intron 35.0%
!! TTCTCAATTTCAGGTTAGGA+AGG - chr6.4:60873797-60873816 MS.gene059609:intron 35.0%
AAGTGTAACAGTTCTGCATC+TGG - chr6.4:60873455-60873474 MS.gene059609:intron 40.0%
AATGATATCGAGTGCTCTTG+GGG - chr6.4:60874208-60874227 MS.gene059609:intron 40.0%
AATTGAAGGGGTGGAATTGT+GGG - chr6.4:60872573-60872592 MS.gene059609:intron 40.0%
AGCTTACCATACTTGAGCAA+TGG - chr6.4:60874875-60874894 MS.gene059609:intron 40.0%
ATTCCTTCAGGGTCAAATTG+AGG - chr6.4:60874689-60874708 MS.gene059609:intron 40.0%
ATTGCAGCAAAATGGAGTAG+TGG + chr6.4:60872428-60872447 None:intergenic 40.0%
CAACATGTGATTTCTGCCAA+AGG + chr6.4:60875665-60875684 None:intergenic 40.0%
CTAGGAATATGACAGTGGTA+TGG - chr6.4:60874604-60874623 MS.gene059609:intron 40.0%
GAAAATAAAGGAGGAGGTTG+TGG + chr6.4:60872004-60872023 None:intergenic 40.0%
GCAATGGATCAGGAAATACA+AGG - chr6.4:60874891-60874910 MS.gene059609:intron 40.0%
GCCTGCATAATTCCAAAGTT+AGG + chr6.4:60874851-60874870 None:intergenic 40.0%
GCTTCTTCATTAAGGATCCA+TGG - chr6.4:60872884-60872903 MS.gene059609:CDS 40.0%
GGAGATGAAAATAAAGGAGG+AGG + chr6.4:60872010-60872029 None:intergenic 40.0%
GGTGGAACATCAATAACATG+AGG - chr6.4:60871969-60871988 MS.gene059609:CDS 40.0%
GTGCTTGTGTTATGGTTGTT+TGG + chr6.4:60874746-60874765 None:intergenic 40.0%
GTGTGAGAGAAAAGTTTGAG+AGG - chr6.4:60876399-60876418 MS.gene059609:intron 40.0%
TAATTGAAGGGGTGGAATTG+TGG - chr6.4:60872572-60872591 MS.gene059609:intron 40.0%
TCCACATGAATGCAAGAATG+TGG - chr6.4:60875598-60875617 MS.gene059609:intron 40.0%
TCCACATTCTTGCATTCATG+TGG + chr6.4:60875602-60875621 None:intergenic 40.0%
TGATGGCTAGTAACCCTAAT+TGG - chr6.4:60871948-60871967 MS.gene059609:CDS 40.0%
TGGGGCAATGAAAAAAGCTA+GGG - chr6.4:60873478-60873497 MS.gene059609:intron 40.0%
TGTATTGTGGGGAAAAAGCT+TGG - chr6.4:60873180-60873199 MS.gene059609:intron 40.0%
TTAACAGCGTGCTTGTGTTA+TGG + chr6.4:60874754-60874773 None:intergenic 40.0%
TTGCAGCAAAATGGAGTAGT+GGG + chr6.4:60872427-60872446 None:intergenic 40.0%
! CTACAAGTTGGGAATGACAA+TGG - chr6.4:60876826-60876845 MS.gene059609:CDS 40.0%
!! CTGCATGATATTTTAGAGGG+GGG - chr6.4:60874537-60874556 MS.gene059609:intron 40.0%
!! TACATGAGTTGTTGACTCCA+TGG + chr6.4:60872121-60872140 None:intergenic 40.0%
!!! ACCCTGAGCTTTTAGCTTTA+AGG + chr6.4:60875442-60875461 None:intergenic 40.0%
!!! ATGAGTGTCGTTTTAGGCTT+TGG - chr6.4:60876271-60876290 MS.gene059609:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr6.4:60876504-60876523 MS.gene059609:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr6.4:60876523-60876504 None:intergenic 40.0%
!!! TTTTTGGCTAATTGAAGGGG+TGG - chr6.4:60872564-60872583 MS.gene059609:intron 40.0%
ACCACTAGATCGATCTTCTG+AGG - chr6.4:60872812-60872831 MS.gene059609:intron 45.0%
ACCTCAGAAGATCGATCTAG+TGG + chr6.4:60872816-60872835 None:intergenic 45.0%
AGGAGTTGGAAGTTTCTCCA+TGG + chr6.4:60873551-60873570 None:intergenic 45.0%
ATCCAAAGGATTACCTGACC+AGG + chr6.4:60875972-60875991 None:intergenic 45.0%
ATGGGGAAACAAGCTGATGA+AGG + chr6.4:60873848-60873867 None:intergenic 45.0%
CAGGTTAGGAAGGAGAAGTT+AGG - chr6.4:60873807-60873826 MS.gene059609:intron 45.0%
CCAGCTCAATTGCAGCAAAA+TGG + chr6.4:60872436-60872455 None:intergenic 45.0%
CCATACTTGAGCAATGGATC+AGG - chr6.4:60874881-60874900 MS.gene059609:intron 45.0%
CCTGATCCATTGCTCAAGTA+TGG + chr6.4:60874884-60874903 None:intergenic 45.0%
GACAATAGTTACTCCCCACA+TGG + chr6.4:60873607-60873626 None:intergenic 45.0%
GACACAACCCTCTACTCTTT+AGG + chr6.4:60876786-60876805 None:intergenic 45.0%
GCTTGTTTCCCCATTTGGAA+AGG - chr6.4:60873854-60873873 MS.gene059609:intron 45.0%
GGTGACTAGGAATATGACAG+TGG - chr6.4:60874599-60874618 MS.gene059609:intron 45.0%
GTAACAGTTCTGCATCTGGT+GGG - chr6.4:60873459-60873478 MS.gene059609:intron 45.0%
GTGGGAGAGGAAGATAAGAT+TGG - chr6.4:60872591-60872610 MS.gene059609:intron 45.0%
GTGGGGCAATGAAAAAAGCT+AGG - chr6.4:60873477-60873496 MS.gene059609:intron 45.0%
TAACAGTTCTGCATCTGGTG+GGG - chr6.4:60873460-60873479 MS.gene059609:intron 45.0%
TCACCTCAATTTGACCCTGA+AGG + chr6.4:60874695-60874714 None:intergenic 45.0%
TCAGAAGATCGATCTAGTGG+TGG + chr6.4:60872813-60872832 None:intergenic 45.0%
TCCAAAGGATTACCTGACCA+GGG + chr6.4:60875971-60875990 None:intergenic 45.0%
TGGCTAGTAACCCTAATTGG+TGG - chr6.4:60871951-60871970 MS.gene059609:CDS 45.0%
TGGGGAAACAAGCTGATGAA+GGG + chr6.4:60873847-60873866 None:intergenic 45.0%
TGTAACAGTTCTGCATCTGG+TGG - chr6.4:60873458-60873477 MS.gene059609:intron 45.0%
TGTTTATTCCCTGAAGACCC+TGG - chr6.4:60875951-60875970 MS.gene059609:intron 45.0%
! CATCAGCTTGTTTCCCCATT+TGG - chr6.4:60873849-60873868 MS.gene059609:intron 45.0%
! CCATTTTGCTGCAATTGAGC+TGG - chr6.4:60872433-60872452 MS.gene059609:intron 45.0%
!! AGTTGTTGACTCCATGGTTC+GGG + chr6.4:60872115-60872134 None:intergenic 45.0%
!! GAGTTGTTGACTCCATGGTT+CGG + chr6.4:60872116-60872135 None:intergenic 45.0%
!! GCTCTTGGGGCACTTTTTAA+GGG - chr6.4:60874221-60874240 MS.gene059609:intron 45.0%
!! TGCTCTTGGGGCACTTTTTA+AGG - chr6.4:60874220-60874239 MS.gene059609:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr6.4:60876503-60876522 MS.gene059609:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr6.4:60876522-60876503 None:intergenic 45.0%
!! AATTAATAATCTAAATTATT+TGG - chr6.4:60876678-60876697 MS.gene059609:intron 5.0%
!!! TTAAATTACTTTATTATTTT+TGG - chr6.4:60873380-60873399 MS.gene059609:intron 5.0%
!!! TTATTAATTTTTCTATAATA+TGG - chr6.4:60872331-60872350 MS.gene059609:intron 5.0%
AAAGGAGGAGGTTGTGGAGA+TGG + chr6.4:60871998-60872017 None:intergenic 50.0%
ACCCTGGTCAGGTAATCCTT+TGG - chr6.4:60875967-60875986 MS.gene059609:intron 50.0%
ATCAAGAGCTTCCCGAACCA+TGG - chr6.4:60872101-60872120 MS.gene059609:intron 50.0%
ATTACCTGACCAGGGTCTTC+AGG + chr6.4:60875963-60875982 None:intergenic 50.0%
GAAGAGGAAAGCAGCTGAAG+AGG - chr6.4:60876222-60876241 MS.gene059609:CDS 50.0%
TTACCTGACCAGGGTCTTCA+GGG + chr6.4:60875962-60875981 None:intergenic 50.0%
AAGGGGTGGAATTGTGGGAG+AGG - chr6.4:60872578-60872597 MS.gene059609:intron 55.0%
ATTCCCTGAAGACCCTGGTC+AGG - chr6.4:60875956-60875975 MS.gene059609:intron 55.0%
GATTATTGGGCACCTGCCCT+AGG - chr6.4:60876853-60876872 MS.gene059609:CDS 55.0%
ACCGAAAGCCTCCTCCTCCT+AGG + chr6.4:60876873-60876892 None:intergenic 60.0%
CCCTAGGAGGAGGAGGCTTT+CGG - chr6.4:60876869-60876888 MS.gene059609:CDS 60.0%
CCGAAAGCCTCCTCCTCCTA+GGG + chr6.4:60876872-60876891 None:intergenic 60.0%
GGAGGAGGTTGTGGAGATGG+TGG + chr6.4:60871995-60872014 None:intergenic 60.0%
TATTGGGCACCTGCCCTAGG+AGG - chr6.4:60876856-60876875 MS.gene059609:CDS 60.0%
AAGCCTCCTCCTCCTAGGGC+AGG + chr6.4:60876868-60876887 None:intergenic 65.0%
GCACCTGCCCTAGGAGGAGG+AGG - chr6.4:60876862-60876881 MS.gene059609:CDS 70.0%
TGGGCACCTGCCCTAGGAGG+AGG - chr6.4:60876859-60876878 MS.gene059609:CDS 70.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 60871947 60876894 60871947 ID=MS.gene059609
chr6.4 mRNA 60871947 60876894 60871947 ID=MS.gene059609.t1;Parent=MS.gene059609
chr6.4 exon 60876704 60876894 60876704 ID=MS.gene059609.t1.exon1;Parent=MS.gene059609.t1
chr6.4 CDS 60876704 60876894 60876704 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
chr6.4 exon 60876008 60876260 60876008 ID=MS.gene059609.t1.exon2;Parent=MS.gene059609.t1
chr6.4 CDS 60876008 60876260 60876008 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
chr6.4 exon 60875309 60875383 60875309 ID=MS.gene059609.t1.exon3;Parent=MS.gene059609.t1
chr6.4 CDS 60875309 60875383 60875309 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
chr6.4 exon 60874966 60875031 60874966 ID=MS.gene059609.t1.exon4;Parent=MS.gene059609.t1
chr6.4 CDS 60874966 60875031 60874966 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
chr6.4 exon 60874131 60874196 60874131 ID=MS.gene059609.t1.exon5;Parent=MS.gene059609.t1
chr6.4 CDS 60874131 60874196 60874131 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
chr6.4 exon 60873916 60873972 60873916 ID=MS.gene059609.t1.exon6;Parent=MS.gene059609.t1
chr6.4 CDS 60873916 60873972 60873916 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
chr6.4 exon 60872864 60872908 60872864 ID=MS.gene059609.t1.exon7;Parent=MS.gene059609.t1
chr6.4 CDS 60872864 60872908 60872864 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
chr6.4 exon 60872598 60872639 60872598 ID=MS.gene059609.t1.exon8;Parent=MS.gene059609.t1
chr6.4 CDS 60872598 60872639 60872598 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
chr6.4 exon 60871947 60872084 60871947 ID=MS.gene059609.t1.exon9;Parent=MS.gene059609.t1
chr6.4 CDS 60871947 60872084 60871947 ID=cds.MS.gene059609.t1;Parent=MS.gene059609.t1
Gene Sequence

>MS.gene059609

ATGATGGCTAGTAACCCTAATTGGTGGAACATCAATAACATGAGGCCACCATCTCCACAACCTCCTCCTTTATTTTCATCTCCTTCTAACTTTCTCAACCCTAATTATGCACCAACTTCATCTTTTCTTCCTTTTTCTTCATGGCATGAAAATCATCAAGAGCTTCCCGAACCATGGAGTCAACAACTCATGTATTTCTCTCTCTCTTACAATAATCACTATTTTTTTTTAAGGGACAACAATCACTACTAAATTAGTAAGGGGAATTTAGAGACACAAAATGAAAAATCACTCTAAATCTGTCAATAAATTTAGTCACTAAAGTTAGTGACAAGAGATTTAGAGGGGAATTTCAATTTTTTTATGACTAATTTTTGTAACTGATTATTAATTTTTCTATAATATGGATATAGACTTGTTCTATAACCATTATGGTGAATATTATACATGCATGTTTGAGTATTTCGTATTGTGATTCCCACTACTCCATTTTGCTGCAATTGAGCTGGAAAATCTCTTGTATTTTCTAATAAATAGATCTATTTAGAAGTTTTAAAAAGTTAAAATTCAAACGTATGTGTTTGGTTAATTAGGAAGGATCAAAATCTAATTAATTGTTTTTGGCTAATTGAAGGGGTGGAATTGTGGGAGAGGAAGATAAGATTGGTATGAGCCAATTTCAAAATCAAATGCTAATAAGTCAAGCTCCAAATGCTTCTCTTGTTGATGTTAAACAAGAAAGCTCAGGAAATAGCTATGCATATGGACATGGAAATGAAGAACTTAATTCATGTGTGACAAGTTTCAACAACAACAACATGTTGGATTTCACTAACAACAATAGTAATATAGATGTGAGGCATCCACCACTAGATCGATCTTCTGAGGTATGTAAGAGAATAGATATATTAACTATCAATTTTGATCATGAAAAAAAGCTTCTTCATTAAGGATCCATGGCTAGACTTTTTATGAATTCATATTACCTTTTTTTTCTTGGTCAATGAGTTGCACAAATTAAACTCACTTTTTCAAGAAACTTTACCAATATTAGCACCTTTAAACAACTTTACCATGCTTTACAATATTTAATTAAAAATATTATTTTTATTTCCAATATAAAATTATATATGCAATCGTGAAAGGCAAGAGTAGCCAATCTTTTTTAGCTTGAAATCATAAGGGGGTCTTTCATTCTAATTTCTTCATTTTTTTTTGACAAAAATTTCTTCATGTATTGTGGGGAAAAAGCTTGGTAAACTTGTTTCTATTATCTTTTTTAGAGACATAATTAGAGATGTATTTTGCATTTTTTTCATCTTTATACTTCAGTCGTTCGTTTAAATTTTTTCATAGCGACACTGTAATCTGAGTCGCGACATCAATATCTTTTCATTTTTTACATTAGTTCATATGAAATATGAAATATAGATTTAAATTACTTTATTATTTTTGGTAATTTAGTAAGAATTAAATAAATTAATTAACCAAGATTTCTTTCATTCTACAAGTGTAACAGTTCTGCATCTGGTGGGGCAATGAAAAAAGCTAGGGTTCAACAATCTACAACTCAAACTACTTTCAAGGTATAATGCAAACTTCCATGGAGAAACTTCCAACTCCTTAACTCTCTTTCATGCATACAAACATACAAATACCATGTGGGGAGTAACTATTGTCTTTCTTGGTTTGTCCAATTCTCAATTGCAATTATTCTTTATCTACTTTGTTTCATCAATTTACTATCATAGAAAGAAATAAAAAAGAATCAAAATGAGCCTAATACAACAACAAAATATAGCCAACTTTTTAGCATGTGCACTTGTCCTACACGTTTTCATGATATCTTGTTCTCAATTTCAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTTGTTTCCCCATTTGGAAAGGTAATTAATTAATCCTAGTTTATTCAATAAGAAATTTATTATATGCTTTTTAATAGAAAGGCATTAACATTTTAATTTTCTTTATACAGAATATTTTATAATAAAAGTTTCTAATCCCCACTAAATCCAAAATAGGGAACAAAAAAAACTTTTAAAAAAAATTGTTATAAATTAAAGTGGCAATAATTGTTATTTTACAACAATAAAAAAACTAAAATAGTTGTAACCCTAAGCAGTAAGCACTAGTAAAAATTTATTTACCATCACTATTAGAGAAAAAATTATCACTAAAAGTTATAGACATAAAATGAAATTGCTATTTAATTTAGAAAAATGATATCGAGTGCTCTTGGGGCACTTTTTAAGGGCATTTAAATAGTATGTTTTTGTGAAAATATGTGTAGTTATTGCATTGAAAATTAAAATAATTTATTTTTAAAAAAATATTTTTTTTATTTGAAATGCTTAAAGAATGTTCTGTAAACACCCGTTAACACGATCCTTTAATTTATTTGCTACTACATTCGAGGAGAAAATTAATTAGAGAAAAATTTATATTTTCAATCTCTATTTTTTTGTTGTTAGTTTAGTTTCTTAATAACATATTGTTATTTATAAGTAAAAATATCGTTAAATTTTTCTTTTTCTATCTTCTATTTTTCTGCATGATATTTTAGAGGGGGGAAAAAGGTTACTTAATTTATTGCATTATATATAGAAAGTGGTGACTAGGAATATGACAGTGGTATGGTATATTTCACTTTTTCAGACTGACACAGCCTCTGTCTTGTTAGAAGCTATTGGTTATATCAGATTCCTTCAGGGTCAAATTGAGGTGATCGATGATTCTTTCTTCACTTTATTTTCCCAAACAACCATAACACAAGCACGCTGTTAAAGTTCCATTTCACATTTGCCTTAATTTGTGTTCTTCAAGTTCTTAAAATGCATGCATTTTTGTCATCCTTTTTTCCTAACTTTGGAATTATGCAGGCTCTTAGCTTACCATACTTGAGCAATGGATCAGGAAATACAAGGCAACCACATTCGGTAAGAATTAATATGGTCAATTACTCCCTCAACTTACCCCACAAAAATTGTCATAGTTCTTTGTTTCACACATTAAAAAAAAAGTTAAATGAATAATTGAACTCAAGTGGTTAACCAATTTCATCAAAAAAAAAAAAATGATTAATGTACTTCATTAAATGACAACTCATTTAGGATAATCCAAGTTCAATTCTTAAATGAAACCAGTTTCAATTGACTTTACTTATCTTTTAGTCGAACTTTAGATTACCAGAAAACTGGAATATTAACACTCAAATAAAAAGTTATAAACTAATGAGAGAGAATTAAGATTTTACCAATTATTCAATTCTTTGATTCTTAATTTAAAATATGCAAAGTTAAACATAATAACTTAAAAATTATACTTATATTGTTCATCAGAGGGTATAAATGGTAAAATGTAATTAATACTCCCTCTAATTCTTTTTTATAAATGACAAACGAGTCAACAAAAATACATGTATTTGATTCATAATAAAGACTTTCTTTGATCCTTAAAGCTAAAAGCTCAGGGTTCGATCATTAACATTTATGAATAGAGAAGCCTCTAATATCCTCGACAATATATCAAAAATAAATTTTGATAGTTGTACGTAAAATTAAAATGTTTTAGTTTATAAAAAGATAAGTGCCAAATATTAGGAAAGGAACTCCACATGAATGCAAGAATGTGGAATTGTAGTATCAAAAGAACAAAAAAAAAATGTAGTTTGTTCCTTTGGCAGAAATCACATGTTGTGTTAAAATCAAGGGGTCAAAATTGTTTCGTGTGTTTCTTTGGCCATACCTTCGTAAAAATAAGCATTATTCAAAAACATAAAAGACATTTCTCACTTTCTTAAGAAAGAATAATCACTTTCTCTCTCTTCTTTCTACTTTCATCTGCTTCTGAATTCTTGCTTCATATAGTTTGATCTTGCATGTGCAAAAATGTTATGGATAATTATGTGGTACTAATTGACTGATGATTGTAATTATTTAATTAGGTTCAAGGAGAGAATAATTGTTTATTCCCTGAAGACCCTGGTCAGGTAATCCTTTGGATCCATTATAACTAAAGAGAAATGTTACCAGCTTTATCAGATTTAATATAACTCATTGCTAAAAAATAAAAGATTTAATATAACTCAAATATATGAATAATAAAAACAAGGGGTTTGCTTTACAGCATCACTAATTAATTACAAATTAATTGAAAAGTTGAATGCTTATTAATTGATTAAATTCTGATTTTAATTTACTTTTCTGATTACAGCTCCTAAATGAAAATGGCTTGAAGAGGAAAGCAGCTGAAGAGGTAATCAAATACTCCCTCCGTTTCAAAATGAGTGTCGTTTTAGGCTTTGGCACACAGATTAAGAAATGGAATGAAATAATCATTGGATATAACGCTTTTACTAAACTGTCCTTACTTTATTAGAAAAAGTTAAACTTAAAGTTGTATTGAAAATTGTGTGAGAGAAAAGTTTGAGAGGGTAAAGTTGGAAGAAAAAAATTAAAGTTGTATTGGAAATGTAAAGCGACATTCATTTTGAAACAAATTTTTTTGGCTAAAGCGACACTCATTTTGAAACGGAGGGAGTATGTTCTCAAAATACAAATTCAATAAAGTTTTGTTTCTTTTCTTTTATAATTATTAATTATCACTATTAAAAAAGTTGTCTTACCAATAAAAATTAGAGACCAAAAAATTATTGTCTTTGATTTCATCATAACAGTAATAGACATTAAAATTAATAATCTAAATTATTTGGTAATAATTGTGTTTTTAGTTCTTATGTGTTTTTTCATGTTGGTGATAACTAATTAGGTTTCTCAAGAAGAACATAAGAAGAACCTAAAGAGTAGAGGGTTGTGTCTTGTTCCAGTATCATGTACACTACAAGTTGGGAATGACAATGGAGCTGATTATTGGGCACCTGCCCTAGGAGGAGGAGGCTTTCGGTAG

Protein sequence

>MS.gene059609.t1

MMASNPNWWNINNMRPPSPQPPPLFSSPSNFLNPNYAPTSSFLPFSSWHENHQELPEPWSQQLMGGIVGEEDKIGMSQFQNQMLISQAPNASLVDVKQESSGNSYAYGHGNEELNSCVTSFNNNNMLDFTNNNSNIDVRHPPLDRSSECNSSASGGAMKKARVQQSTTQTTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSLPYLSNGSGNTRQPHSVQGENNCLFPEDPGQLLNENGLKRKAAEEVSQEEHKKNLKSRGLCLVPVSCTLQVGNDNGADYWAPALGGGGFR