AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53232

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53232.t1 MTR_3g005495 86.564 454 51 4 36 486 28 474 0.0 797
MS.gene53232.t1 MTR_3g005495 51.055 237 103 4 16 242 238 471 2.06e-66 221
MS.gene53232.t1 MTR_3g005460 67.899 514 133 8 1 483 1 513 0.0 664
MS.gene53232.t1 MTR_3g005420 64.522 513 152 7 1 483 20 532 0.0 625
MS.gene53232.t1 MTR_3g005420 58.285 513 149 8 1 483 1 478 0.0 543
MS.gene53232.t1 MTR_3g005440 58.837 430 123 6 35 440 34 433 8.19e-162 465
MS.gene53232.t1 MTR_3g005440 52.941 204 68 2 16 197 237 434 1.72e-60 205
MS.gene53232.t1 MTR_5g070440 56.985 272 93 3 1 249 1 271 2.13e-95 290
MS.gene53232.t1 MTR_5g070440 56.627 249 90 4 253 483 16 264 8.82e-89 273
MS.gene53232.t1 MTR_3g005490 60.166 241 85 5 253 483 16 255 1.39e-91 280
MS.gene53232.t1 MTR_3g005490 57.795 263 96 4 1 249 1 262 3.92e-91 278
MS.gene53232.t1 MTR_3g005480 55.682 264 101 4 1 249 1 263 1.21e-86 267
MS.gene53232.t1 MTR_3g005480 55.602 241 97 4 253 483 16 256 3.03e-85 263
MS.gene53232.t1 MTR_3g098790 29.474 285 144 9 257 484 12 296 7.77e-26 108
MS.gene53232.t1 MTR_3g098790 28.571 301 150 11 14 251 6 304 1.27e-20 93.2
MS.gene53232.t1 MTR_1g034240 46.465 99 53 0 258 356 7 105 3.15e-25 108
MS.gene53232.t1 MTR_1g034240 43.119 109 61 1 21 128 7 115 1.04e-22 100
MS.gene53232.t1 MTR_1g015350 39.024 164 46 5 301 464 58 167 5.72e-24 99.0
MS.gene53232.t1 MTR_1g015350 38.415 164 52 4 64 227 58 172 4.47e-22 93.6
MS.gene53232.t1 MTR_8g103940 23.760 484 285 16 35 481 53 489 2.27e-22 100
MS.gene53232.t1 MTR_8g103940 26.190 294 144 8 258 483 39 327 1.36e-21 97.8
MS.gene53232.t1 MTR_7g050580 29.588 267 138 8 257 474 12 277 8.71e-22 96.3
MS.gene53232.t1 MTR_7g050580 35.135 111 72 0 9 119 1 111 4.35e-18 85.5
MS.gene53232.t1 MTR_4g068320 41.176 102 60 0 255 356 3 104 3.45e-21 96.3
MS.gene53232.t1 MTR_4g068320 39.091 110 67 0 18 127 3 112 4.91e-20 92.8
MS.gene53232.t1 MTR_3g061310 26.966 267 141 5 21 235 12 276 1.46e-20 92.0
MS.gene53232.t1 MTR_3g061310 38.384 99 59 1 258 356 12 108 1.14e-15 77.8
MS.gene53232.t1 MTR_1g034210 39.806 103 62 0 258 360 7 109 9.89e-20 90.5
MS.gene53232.t1 MTR_1g034210 40.741 108 63 1 21 128 7 113 1.81e-18 86.7
MS.gene53232.t1 MTR_1g034210 44.444 90 50 0 258 347 7 96 2.20e-19 90.1
MS.gene53232.t1 MTR_1g034210 40.741 108 63 1 21 128 7 113 3.35e-18 86.7
MS.gene53232.t1 MTR_5g044670 26.409 337 193 10 21 352 16 302 3.70e-19 89.0
MS.gene53232.t1 MTR_5g044670 35.398 113 73 0 244 356 2 114 2.08e-17 83.6
MS.gene53232.t1 MTR_7g050710 27.465 284 134 9 20 232 12 294 4.94e-19 88.2
MS.gene53232.t1 MTR_7g050710 24.735 283 148 6 257 474 12 294 2.97e-18 86.3
MS.gene53232.t1 MTR_3g061320 42.574 101 56 1 20 120 11 109 2.04e-18 85.9
MS.gene53232.t1 MTR_3g061320 27.473 273 147 9 257 484 11 277 8.53e-17 80.9
MS.gene53232.t1 MTR_7g050560 36.893 103 65 0 20 122 12 114 2.26e-18 86.3
MS.gene53232.t1 MTR_7g050560 34.211 114 75 0 257 370 12 125 2.30e-17 83.2
MS.gene53232.t1 MTR_3g061350 25.912 274 153 7 258 484 12 282 4.44e-18 84.7
MS.gene53232.t1 MTR_3g061350 37.500 112 68 1 21 132 12 121 9.11e-18 84.0
MS.gene53232.t1 MTR_3g061370 26.087 276 154 7 255 483 6 278 4.85e-18 84.7
MS.gene53232.t1 MTR_3g061370 26.374 273 148 7 17 238 5 275 1.34e-16 80.5
MS.gene53232.t1 MTR_1g035460 26.389 288 128 8 274 483 2 283 5.17e-18 86.3
MS.gene53232.t1 MTR_1g035460 24.916 297 131 8 37 249 2 290 1.19e-15 79.0
MS.gene53232.t1 MTR_3g061290 40.594 101 58 1 20 120 11 109 1.28e-17 81.6
MS.gene53232.t1 MTR_3g061290 32.192 146 91 3 257 401 11 149 2.45e-15 75.1
MS.gene53232.t1 MTR_7g050720 33.600 125 83 0 257 381 9 133 4.08e-17 82.8
MS.gene53232.t1 MTR_7g050720 37.000 100 63 0 20 119 9 108 1.62e-16 80.9
MS.gene53232.t1 MTR_3g061340 27.170 265 149 8 258 483 12 271 1.28e-16 80.5
MS.gene53232.t1 MTR_3g061340 38.182 110 65 2 21 129 12 119 1.98e-14 73.9
MS.gene53232.t1 MTR_7g050590 35.433 127 73 4 37 155 2 127 2.16e-16 80.1
MS.gene53232.t1 MTR_7g050590 25.564 266 133 6 274 474 2 267 2.74e-15 77.0
MS.gene53232.t1 MTR_3g061330 40.000 100 58 1 21 120 12 109 5.56e-16 78.2
MS.gene53232.t1 MTR_3g061330 39.394 99 58 1 258 356 12 108 4.81e-14 72.4
MS.gene53232.t1 MTR_6g061070 33.803 142 81 4 252 383 10 148 1.07e-15 79.7
MS.gene53232.t1 MTR_6g043890 36.434 129 73 3 257 379 14 139 1.58e-14 75.1
MS.gene53232.t1 MTR_7g050640 33.663 101 67 0 14 114 6 106 1.66e-14 70.1
MS.gene53232.t1 MTR_7g050640 35.789 95 61 0 257 351 12 106 4.64e-12 63.2
MS.gene53232.t1 MTR_1g035480 29.286 140 95 3 257 395 16 152 4.33e-14 70.9
MS.gene53232.t1 MTR_1g108780 26.007 273 124 9 273 474 12 277 8.98e-14 73.6
MS.gene53232.t1 MTR_1g108780 34.524 84 55 0 36 119 12 95 3.08e-12 68.9
MS.gene53232.t1 MTR_1g021360 26.978 278 142 9 269 486 193 469 1.60e-13 73.2
MS.gene53232.t1 MTR_1g021290 33.051 118 69 2 257 365 27 143 2.66e-13 71.6
MS.gene53232.t1 MTR_3g061220 37.000 100 48 2 21 120 12 96 2.79e-13 66.6
MS.gene53232.t1 MTR_3g061220 32.479 117 60 3 258 370 12 113 2.23e-11 61.2
MS.gene53232.t1 MTR_1g033740 32.743 113 71 3 257 369 21 128 1.24e-12 67.0
MS.gene53232.t1 MTR_1g035500 30.469 128 83 3 246 373 16 137 1.59e-12 66.6
MS.gene53232.t1 MTR_1g035510 35.714 98 60 2 274 371 2 96 2.58e-12 66.6
MS.gene53232.t1 MTR_1g035440 35.577 104 66 1 257 359 14 117 3.12e-12 67.0
MS.gene53232.t1 MTR_1g050845 25.940 266 142 9 256 479 7 259 6.43e-12 68.6
MS.gene53232.t1 MTR_4g119990 34.783 115 68 2 257 370 14 122 3.05e-11 65.5
MS.gene53232.t1 MTR_1g021320 36.957 92 56 2 257 348 183 272 3.79e-11 66.2
MS.gene53232.t1 MTR_1g021330 33.696 92 61 0 257 348 25 116 3.96e-11 65.1
MS.gene53232.t1 MTR_1g021400 33.684 95 63 0 257 351 29 123 4.07e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53232.t1 AT3G18960 39.167 120 73 0 239 358 11 130 4.79e-23 97.1
MS.gene53232.t1 AT3G18960 35.043 117 73 1 3 119 15 128 6.24e-18 82.4
MS.gene53232.t1 AT3G18960 39.167 120 73 0 239 358 11 130 5.95e-23 97.1
MS.gene53232.t1 AT3G18960 35.043 117 73 1 3 119 15 128 1.35e-17 82.0
MS.gene53232.t1 AT4G01580 42.718 103 59 0 256 358 28 130 1.99e-22 95.1
MS.gene53232.t1 AT4G01580 36.449 107 68 0 13 119 22 128 9.72e-18 81.6
MS.gene53232.t1 AT3G18990 34.940 166 96 4 258 421 6 161 1.66e-21 95.9
MS.gene53232.t1 AT3G18990 41.414 99 58 0 21 119 6 104 8.35e-20 90.9
MS.gene53232.t1 AT3G18990 34.940 166 96 4 258 421 6 161 2.78e-21 95.9
MS.gene53232.t1 AT3G18990 41.414 99 58 0 21 119 6 104 1.36e-19 90.9
MS.gene53232.t1 AT1G49475 36.429 140 87 2 228 366 3 141 8.94e-20 87.4
MS.gene53232.t1 AT1G49475 37.600 125 75 2 5 129 20 141 1.35e-17 81.3
MS.gene53232.t1 AT3G18960 41.860 86 50 0 273 358 8 93 1.97e-17 80.5
MS.gene53232.t1 AT3G18960 36.047 86 55 0 34 119 6 91 3.07e-13 68.2
MS.gene53232.t1 AT1G26680 22.093 516 330 20 20 474 14 518 6.56e-14 75.1
MS.gene53232.t1 AT1G26680 22.093 516 330 20 20 474 14 518 9.76e-14 74.3
MS.gene53232.t1 AT1G26680 22.821 390 252 15 20 381 14 382 3.17e-12 69.7
MS.gene53232.t1 AT1G26680 22.821 390 252 15 20 381 14 382 3.64e-12 69.3
MS.gene53232.t1 AT4G31690 26.383 235 160 6 256 483 12 240 3.25e-11 64.3
MS.gene53232.t1 AT2G24645 23.174 397 271 15 18 393 3 386 4.12e-11 65.5
MS.gene53232.t1 AT2G24645 23.174 397 271 15 18 393 3 386 5.82e-11 65.1

Find 106 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAGTTTATAACAAAATT+TGG 0.100922 3.3:-853886 MS.gene53232:CDS
ATTGCTCTCCATTGCAATTT+TGG 0.125157 3.3:+852141 None:intergenic
ACTGCTTTCCTTGAGAATTT+TGG 0.150373 3.3:+853356 None:intergenic
GAATACTATTCTATTTATTA+TGG 0.217855 3.3:-853748 MS.gene53232:CDS
TGATGGTCTTACTTGGAAAT+TGG 0.227158 3.3:-852624 MS.gene53232:CDS
GGCAGCATCCTTTGATCTTT+TGG 0.235120 3.3:+853585 None:intergenic
TATGGCCTTCTTAAAATGTT+TGG 0.280661 3.3:+852829 None:intergenic
TACTATTTGTTTGTCATGAA+TGG 0.295878 3.3:+852796 None:intergenic
TATGGCTTTCATAAAATGTT+TGG 0.299040 3.3:+856034 None:intergenic
CACCACAGTACTATGCTTAT+AGG 0.300478 3.3:+852301 None:intergenic
CGATGGTCGTGAGTGGGATA+TGG 0.308591 3.3:-853827 MS.gene53232:CDS
AACATTGTTATAAAATCTTC+AGG 0.326094 3.3:+852686 None:intergenic
TTGGAATCTTTCTCCGGTTC+CGG 0.337335 3.3:+856053 None:intergenic
ATGAGTTTATAACAAAATTT+GGG 0.347730 3.3:-853885 MS.gene53232:CDS
TTCAAAACTCCGAGGACTAA+TGG 0.352679 3.3:-853640 MS.gene53232:CDS
TGCACATCCGCCAAAGGCTT+TGG 0.356051 3.3:+853528 None:intergenic
TCCATTGTGTAGTATGTTCC+TGG 0.362474 3.3:-853424 MS.gene53232:intron
ATGAATGGGCGAGGGAAGTA+TGG 0.376143 3.3:+852811 None:intergenic
CTCAAAACTCCAAGTACTAA+TGG 0.380211 3.3:-852437 MS.gene53232:CDS
CTGTACCTGATGGTCTTACT+TGG 0.380651 3.3:-852631 MS.gene53232:CDS
ACGGACAACAATTTGTTAAA+CGG 0.394532 3.3:-852050 MS.gene53232:CDS
GTGCTCGGACACTTTATGTT+TGG 0.397057 3.3:+853613 None:intergenic
TGGAGCATGAACGGAACCTT+TGG 0.402900 3.3:+853376 None:intergenic
ATGATCTGGAGGAGGAAGTA+TGG 0.403287 3.3:+856016 None:intergenic
GTGGGAAGTTTCTTGTATAT+CGG 0.404351 3.3:-853335 MS.gene53232:CDS
ACTATTTGTTTGTCATGAAT+GGG 0.410462 3.3:+852797 None:intergenic
GATGTTTGTTGTACACGTTT+AGG 0.414968 3.3:-852116 MS.gene53232:CDS
GGTCGTTCAGGACTGCGATT+GGG 0.421540 3.3:-852095 MS.gene53232:CDS
TGTACACGTTTAGGTCGTTC+AGG 0.427447 3.3:-852107 MS.gene53232:CDS
ATATGTTCCGTCGCCGGAAC+CGG 0.438395 3.3:-856066 MS.gene53232:CDS
TATTTAGATTTCAAGTATGA+AGG 0.439885 3.3:-853721 MS.gene53232:CDS
TCCCTTCATATTCGAAAGAC+AGG 0.440227 3.3:+852516 None:intergenic
TTTGTTTCTCCATTAGTACT+TGG 0.446615 3.3:+852428 None:intergenic
AAATGTTTGGAATCTTTCTC+CGG 0.460988 3.3:+856047 None:intergenic
AATTTCCAAGTAAGACCATC+AGG 0.471155 3.3:+852626 None:intergenic
TCTGTTCCTTGATCCTCACT+TGG 0.472253 3.3:+852344 None:intergenic
CAATACTATTCTTTAAGATA+CGG 0.474788 3.3:-852545 MS.gene53232:CDS
GTAACTTGTAACACAGCAAC+AGG 0.476992 3.3:+853202 None:intergenic
CGACGAAGTTGTAACACAAC+TGG 0.478088 3.3:+851993 None:intergenic
TCTTTCTCCGGTTCCGGCGA+CGG 0.483238 3.3:+856059 None:intergenic
AAATTGCAATGGAGAGCAAT+GGG 0.490520 3.3:-852138 MS.gene53232:CDS
TATTGAATTGCAGGCGGAGA+AGG 0.498005 3.3:-852864 MS.gene53232:intron
AGCATAATTGATTTCAACCC+TGG 0.498720 3.3:+852376 None:intergenic
TATAGGTAGAAGTAAAAGAA+GGG 0.498835 3.3:+852318 None:intergenic
CAAGGCCTAGGAAAAGGTCC+AGG 0.503244 3.3:-852394 MS.gene53232:CDS
AGTGTCCAAGGCCTAGGAAA+AGG 0.504716 3.3:-852400 MS.gene53232:CDS
TTATAGGTAGAAGTAAAAGA+AGG 0.509475 3.3:+852317 None:intergenic
AGGTCGTTCAGGACTGCGAT+TGG 0.510218 3.3:-852096 MS.gene53232:CDS
TTTCGTTCCAAAGCCTTTGG+CGG 0.513757 3.3:-853535 MS.gene53232:CDS
TTTGGTTCTCCATTAGTCCT+CGG 0.518425 3.3:+853631 None:intergenic
TTCCTGTCTTTCGAATATGA+AGG 0.519724 3.3:-852518 MS.gene53232:CDS
ATATCCCACTCACGACCATC+GGG 0.524249 3.3:+853829 None:intergenic
ATTTAGATTTCAAGTATGAA+GGG 0.527803 3.3:-853720 MS.gene53232:CDS
CATATCCCACTCACGACCAT+CGG 0.533925 3.3:+853828 None:intergenic
AGATCAAAGGATGCTGCCAA+TGG 0.538359 3.3:-853580 MS.gene53232:CDS
TCCTGTCTTTCGAATATGAA+GGG 0.540870 3.3:-852517 MS.gene53232:CDS
ACACGGAGTGTCCAAGGCCT+AGG 0.542974 3.3:-852406 MS.gene53232:CDS
GTGGATTCTGTAGATTTGCA+AGG 0.544893 3.3:-853279 MS.gene53232:CDS
AAAATTGCAATGGAGAGCAA+TGG 0.546760 3.3:-852139 MS.gene53232:CDS
TTGTTTGTCATGAATGGGCG+AGG 0.546897 3.3:+852802 None:intergenic
TCAGGACTGCGATTGGGGAA+AGG 0.546910 3.3:-852089 MS.gene53232:CDS
GTTAAACGGTGATAAATGCA+AGG 0.548716 3.3:-852036 MS.gene53232:CDS
AGGATTCTTTAAATTTGCAA+CGG 0.549729 3.3:-852069 MS.gene53232:CDS
GAGAAGATATGTTCCGTCGC+CGG 0.553699 3.3:-856072 MS.gene53232:CDS
CTGTTCCCGATGGTCGTGAG+TGG 0.561524 3.3:-853834 MS.gene53232:CDS
AAGGCTTTGGAACGAAAACA+AGG 0.561637 3.3:+853541 None:intergenic
ACAAGTTACTGCGTCTCGCA+CGG 0.562350 3.3:-853188 MS.gene53232:intron
AAATTGGAATTGAAGAAACG+TGG 0.566955 3.3:-852608 MS.gene53232:CDS
GCGACGGAACATATCTTCTC+CGG 0.567057 3.3:+856075 None:intergenic
CACTGCTTCCAAAAGATCAA+AGG 0.568858 3.3:-853593 MS.gene53232:CDS
AAACAAACACGGAGTGTCCA+AGG 0.572497 3.3:-852412 MS.gene53232:CDS
TGTTCCTGGTGAATTTGCTA+AGG 0.578362 3.3:-853410 MS.gene53232:CDS
GTCGTTCAGGACTGCGATTG+GGG 0.586295 3.3:-852094 MS.gene53232:CDS
TCTTACTGCACATCCGCCAA+AGG 0.591238 3.3:+853522 None:intergenic
AAGGGAAAACAATCTATCAA+AGG 0.593937 3.3:-853260 MS.gene53232:CDS
AATTGGAATTGAAGAAACGT+GGG 0.594882 3.3:-852607 MS.gene53232:CDS
AAAATTCTCAAGGAAAGCAG+TGG 0.599450 3.3:-853354 MS.gene53232:CDS
TGGATTCTGTAGATTTGCAA+GGG 0.600149 3.3:-853278 MS.gene53232:CDS
ACGACCATCGGGAACAGTAA+TGG 0.600617 3.3:+853840 None:intergenic
TGCTGATGATTCACCAAGTG+AGG 0.601710 3.3:-852357 MS.gene53232:CDS
ACAACTTTGAGCTGATCAAG+AGG 0.603297 3.3:-853228 MS.gene53232:CDS
GATTCACCAAGTGAGGATCA+AGG 0.604229 3.3:-852350 MS.gene53232:CDS
GCAGGCGGAGAAGGAAGGTA+GGG 0.604865 3.3:-852855 MS.gene53232:intron
TGTTCCCGATGGTCGTGAGT+GGG 0.605549 3.3:-853833 MS.gene53232:CDS
TTCATGCTCCAAAATTCTCA+AGG 0.607610 3.3:-853364 MS.gene53232:CDS
GCTACCATTACTGTTCCCGA+TGG 0.608443 3.3:-853844 MS.gene53232:CDS
TGCAGGCGGAGAAGGAAGGT+AGG 0.610068 3.3:-852856 MS.gene53232:intron
AATCCACTCGTAATTCGCAT+TGG 0.611373 3.3:+853295 None:intergenic
AAGAAACAATGAAGACTCAC+CGG 0.615286 3.3:-856094 None:intergenic
TGCTCCTTAGCAAATTCACC+AGG 0.628603 3.3:+853406 None:intergenic
AAATTCTCAAGGAAAGCAGT+GGG 0.637805 3.3:-853353 MS.gene53232:CDS
CTTATTCATTCAAAACTCCG+AGG 0.640841 3.3:-853648 MS.gene53232:CDS
GAATTGCAGGCGGAGAAGGA+AGG 0.644062 3.3:-852860 MS.gene53232:intron
ACACCAATGCGAATTACGAG+TGG 0.647816 3.3:-853298 MS.gene53232:CDS
GTGAAGCTCCAAAATTGCAA+TGG 0.649737 3.3:-852149 MS.gene53232:CDS
TGTTTGTCATGAATGGGCGA+GGG 0.652999 3.3:+852803 None:intergenic
AGGCTTTGGAACGAAAACAA+GGG 0.659531 3.3:+853542 None:intergenic
GCTACAGTTACTGTACCTGA+TGG 0.662981 3.3:-852641 MS.gene53232:CDS
TAAGGAGCATCTGAAGCCAA+AGG 0.672174 3.3:-853392 MS.gene53232:CDS
GGAATTGAAGAAACGTGGGG+AGG 0.674047 3.3:-852603 MS.gene53232:CDS
AAGGCCTAGGAAAAGGTCCA+GGG 0.684915 3.3:-852393 MS.gene53232:CDS
ATGGAACTGAAGAAATGTGG+CGG 0.686123 3.3:-853808 MS.gene53232:CDS
TACCTATAAGCATAGTACTG+TGG 0.687770 3.3:-852303 MS.gene53232:intron
GATATGGAACTGAAGAAATG+TGG 0.697083 3.3:-853811 MS.gene53232:CDS
TACTAATGGAGAAACAAACA+CGG 0.702116 3.3:-852423 MS.gene53232:CDS
ATTGGAATTGAAGAAACGTG+GGG 0.725338 3.3:-852606 MS.gene53232:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr3.3:852769-852750 None:intergenic 0.0%
!! ATATATATATATATATATAT+GGG - chr3.3:852750-852769 MS.gene53232:intron 0.0%
!! TATATATATATATATATATA+GGG + chr3.3:852768-852749 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr3.3:852749-852768 MS.gene53232:intron 0.0%
!! TACTTCTTAATTATTATATA+TGG - chr3.3:852178-852197 MS.gene53232:CDS 10.0%
!! TTTGAAAAATTAAAATTGAA+GGG - chr3.3:852887-852906 MS.gene53232:intron 10.0%
!!! TTTTGAAAAATTAAAATTGA+AGG - chr3.3:852886-852905 MS.gene53232:intron 10.0%
!! ATGAGTTTATAACAAAATTT+GGG - chr3.3:854187-854206 MS.gene53232:intron 15.0%
!! ATTAATTATTAGTGTATGTT+TGG - chr3.3:852296-852315 MS.gene53232:intron 15.0%
!! GAATACTATTCTATTTATTA+TGG - chr3.3:854324-854343 MS.gene53232:intron 15.0%
!! TAGATTCAACTTTATTATTA+AGG + chr3.3:852518-852537 None:intergenic 15.0%
!! TATTTGTTTATAATGTGAAT+TGG - chr3.3:855150-855169 MS.gene53232:intron 15.0%
!!! AAAATTTGATTTTGAAACTT+TGG - chr3.3:852331-852350 MS.gene53232:CDS 15.0%
!!! AAGATTTTATAACAATGTTT+GGG - chr3.3:855390-855409 MS.gene53232:intron 15.0%
!!! ATTTTTGTTACATTGATAAT+AGG + chr3.3:853751-853770 None:intergenic 15.0%
!!! GAATTTTACTTTATAGTATT+TGG - chr3.3:854571-854590 MS.gene53232:intron 15.0%
!! AAATAAGCAAAAGAAATGAT+TGG - chr3.3:853333-853352 MS.gene53232:CDS 20.0%
!! AACATTGTTATAAAATCTTC+AGG + chr3.3:855389-855408 None:intergenic 20.0%
!! AATAAGCAAAAGAAATGATT+GGG - chr3.3:853334-853353 MS.gene53232:CDS 20.0%
!! AGAAACAAAAGAAACAAATA+AGG + chr3.3:853042-853061 None:intergenic 20.0%
!! AGATTTAGAAAAACAAGTTA+GGG + chr3.3:852255-852274 None:intergenic 20.0%
!! GATGAGTTTATAACAAAATT+TGG - chr3.3:854186-854205 MS.gene53232:intron 20.0%
!! TAGATTTAGAAAAACAAGTT+AGG + chr3.3:852256-852275 None:intergenic 20.0%
!! TTTGGGAAAATTAAAAGTAA+AGG + chr3.3:853552-853571 None:intergenic 20.0%
!!! AAGCAAATTATTTTATTCAC+TGG + chr3.3:855036-855055 None:intergenic 20.0%
!!! AAGTTTTCTTTTGCAAAAAT+TGG - chr3.3:854289-854308 MS.gene53232:intron 20.0%
!!! AATTTTGTTATAAACTCATC+TGG + chr3.3:854186-854205 None:intergenic 20.0%
!!! AATTTTTGCAAAAGAAAACT+TGG + chr3.3:854290-854309 None:intergenic 20.0%
!!! ATTTAGATTTCAAGTATGAA+GGG - chr3.3:854352-854371 MS.gene53232:intron 20.0%
!!! CAATACTATTCTTTAAGATA+CGG - chr3.3:855527-855546 MS.gene53232:intron 20.0%
!!! GAAGATTTTATAACAATGTT+TGG - chr3.3:855389-855408 MS.gene53232:intron 20.0%
!!! TATCTTTTTCTGAATTTGTT+TGG - chr3.3:853902-853921 MS.gene53232:intron 20.0%
!!! TATTTAGATTTCAAGTATGA+AGG - chr3.3:854351-854370 MS.gene53232:intron 20.0%
!!! TTTTCAAAAACATAAGAACA+AGG + chr3.3:852875-852894 None:intergenic 20.0%
! AATAATAATGAACTCGTATG+TGG + chr3.3:855134-855153 None:intergenic 25.0%
! ACATAATATCATTTACAGAG+AGG + chr3.3:853865-853884 None:intergenic 25.0%
! ACTATTTGTTTGTCATGAAT+GGG + chr3.3:855278-855297 None:intergenic 25.0%
! AGGATTCTTTAAATTTGCAA+CGG - chr3.3:856003-856022 MS.gene53232:intron 25.0%
! AGTAACTAAAAAACCTACAA+CGG + chr3.3:854985-855004 None:intergenic 25.0%
! ATTCCTATTGAATTTGAGAA+TGG + chr3.3:853195-853214 None:intergenic 25.0%
! CAACGGTTCAAATATTATAA+AGG + chr3.3:854968-854987 None:intergenic 25.0%
! TACTATTTGTTTGTCATGAA+TGG + chr3.3:855279-855298 None:intergenic 25.0%
! TATAATATTTGAACCGTTGT+AGG - chr3.3:854969-854988 MS.gene53232:intron 25.0%
! TATAGGTAGAAGTAAAAGAA+GGG + chr3.3:855757-855776 None:intergenic 25.0%
! TATGGCTTTCATAAAATGTT+TGG + chr3.3:852041-852060 None:intergenic 25.0%
! TTATAGGTAGAAGTAAAAGA+AGG + chr3.3:855758-855777 None:intergenic 25.0%
! TTTCCCAAAAACAAAAACAA+GGG - chr3.3:853563-853582 MS.gene53232:CDS 25.0%
!! ACTATCTCTTTTATATGATC+TGG + chr3.3:852073-852092 None:intergenic 25.0%
!! TTTTCCCAAAAACAAAAACA+AGG - chr3.3:853562-853581 MS.gene53232:CDS 25.0%
!!! AAAAATCATGTTTTGAGTCA+AGG - chr3.3:852537-852556 MS.gene53232:CDS 25.0%
!!! AAACTTAGATTGAGTTGAAT+CGG - chr3.3:852467-852486 MS.gene53232:CDS 25.0%
!!! ATGTTTACTTTTGCAACAAA+TGG - chr3.3:855492-855511 MS.gene53232:intron 25.0%
!!! ATTACCCTTGTTTTTGTTTT+TGG + chr3.3:853570-853589 None:intergenic 25.0%
!!! TTACCCTTGTTTTTGTTTTT+GGG + chr3.3:853569-853588 None:intergenic 25.0%
AAATTGGAATTGAAGAAACG+TGG - chr3.3:855464-855483 MS.gene53232:intron 30.0%
AACATAAGAACAAGGATCTT+TGG + chr3.3:852867-852886 None:intergenic 30.0%
AAGGGAAAACAATCTATCAA+AGG - chr3.3:854812-854831 MS.gene53232:intron 30.0%
AATTGGAATTGAAGAAACGT+GGG - chr3.3:855465-855484 MS.gene53232:intron 30.0%
ACAGCTCTCGAAAAAATAAT+AGG + chr3.3:852947-852966 None:intergenic 30.0%
ACATAAGAACAAGGATCTTT+GGG + chr3.3:852866-852885 None:intergenic 30.0%
AGACCTTCATGAAAATGAAT+GGG - chr3.3:853624-853643 MS.gene53232:CDS 30.0%
AGCATTAATATACTGCACAA+GGG + chr3.3:855867-855886 None:intergenic 30.0%
CAAAAGAAACAAATAAGGAG+CGG + chr3.3:853037-853056 None:intergenic 30.0%
CAATAGGAATACATAATTGC+TGG - chr3.3:853205-853224 MS.gene53232:CDS 30.0%
CTTATCACTTATTGAATTGC+AGG - chr3.3:855199-855218 MS.gene53232:intron 30.0%
CTTCAACTAAAGTTCTTGTT+TGG + chr3.3:854043-854062 None:intergenic 30.0%
GAGAGTAGTAACTTAAATTG+TGG - chr3.3:852648-852667 MS.gene53232:CDS 30.0%
TAACAATGAATCCAAAACAC+AGG + chr3.3:852366-852385 None:intergenic 30.0%
TACTAATGGAGAAACAAACA+CGG - chr3.3:855649-855668 MS.gene53232:intron 30.0%
TAGACCTTCATGAAAATGAA+TGG - chr3.3:853623-853642 MS.gene53232:CDS 30.0%
TATGGCCTTCTTAAAATGTT+TGG + chr3.3:855246-855265 None:intergenic 30.0%
TCATCAGTTATACTATGAGA+GGG + chr3.3:855319-855338 None:intergenic 30.0%
TCTTTAACTGTGAAACTTTG+AGG - chr3.3:853815-853834 MS.gene53232:CDS 30.0%
TTTCTCTGCAATCCTAAAAA+GGG - chr3.3:853057-853076 MS.gene53232:intron 30.0%
! AAATGTTTGGAATCTTTCTC+CGG + chr3.3:852028-852047 None:intergenic 30.0%
! ATCTCTTTTATATGATCTGG+AGG + chr3.3:852070-852089 None:intergenic 30.0%
! TGAATTTGTTTGGACATTCA+AGG - chr3.3:853912-853931 MS.gene53232:intron 30.0%
! TTTGTTTCTCCATTAGTACT+TGG + chr3.3:855647-855666 None:intergenic 30.0%
!! ACGGACAACAATTTGTTAAA+CGG - chr3.3:856022-856041 MS.gene53232:CDS 30.0%
!! CATGTTTGGAATCATTTTTG+TGG + chr3.3:852607-852626 None:intergenic 30.0%
!! GGAATCCAAACATTTTAAGA+AGG - chr3.3:855238-855257 MS.gene53232:intron 30.0%
!! TAGTTCTAAGGTTCTCAAAA+TGG - chr3.3:853980-853999 MS.gene53232:intron 30.0%
!! TTAGTGTGTCTTTAGTTCTA+AGG - chr3.3:853968-853987 MS.gene53232:intron 30.0%
!! TTTGGAATCATTTTTGTGGA+AGG + chr3.3:852603-852622 None:intergenic 30.0%
!!! AACGAAAACAAGGGTTTTTT+GGG + chr3.3:854524-854543 None:intergenic 30.0%
AAAATTCTCAAGGAAAGCAG+TGG - chr3.3:854718-854737 MS.gene53232:intron 35.0%
AAAATTGCAATGGAGAGCAA+TGG - chr3.3:855933-855952 MS.gene53232:intron 35.0%
AAATTCTCAAGGAAAGCAGT+GGG - chr3.3:854719-854738 MS.gene53232:intron 35.0%
AAATTGCAATGGAGAGCAAT+GGG - chr3.3:855934-855953 MS.gene53232:intron 35.0%
AATTTCCAAGTAAGACCATC+AGG + chr3.3:855449-855468 None:intergenic 35.0%
ACTCTAACTGTCAAACTTTG+AGG - chr3.3:852140-852159 MS.gene53232:CDS 35.0%
AGACCTTCATGAAAATGAGT+GGG + chr3.3:852813-852832 None:intergenic 35.0%
AGGCCATTCTCAAATTCAAT+AGG - chr3.3:853189-853208 MS.gene53232:CDS 35.0%
ATAAATGTGTAACCCCTCTT+TGG - chr3.3:852678-852697 MS.gene53232:CDS 35.0%
ATCACTTATTGAATTGCAGG+CGG - chr3.3:855202-855221 MS.gene53232:intron 35.0%
ATTATGTGCAAGAGAGAAGA+AGG - chr3.3:853398-853417 MS.gene53232:CDS 35.0%
ATTGGAATTGAAGAAACGTG+GGG - chr3.3:855466-855485 MS.gene53232:intron 35.0%
CAACTCATCTGTTACAGTAT+AGG + chr3.3:854135-854154 None:intergenic 35.0%
CAGCATTAATATACTGCACA+AGG + chr3.3:855868-855887 None:intergenic 35.0%
CTCAAAACTCCAAGTACTAA+TGG - chr3.3:855635-855654 MS.gene53232:intron 35.0%
CTCATCAGTTATACTATGAG+AGG + chr3.3:855320-855339 None:intergenic 35.0%
CTTATTCATTCAAAACTCCG+AGG - chr3.3:854424-854443 MS.gene53232:intron 35.0%
GATATGGAACTGAAGAAATG+TGG - chr3.3:854261-854280 MS.gene53232:intron 35.0%
GCTATCATCAATGAGCAATA+TGG - chr3.3:855009-855028 MS.gene53232:intron 35.0%
GGATAACAAAGATGAAGGTA+AGG + chr3.3:852983-853002 None:intergenic 35.0%
GGTTGTAGCTATAGGTTTAT+TGG - chr3.3:853079-853098 MS.gene53232:intron 35.0%
GTAATTGTGTCCAAGTGAAA+AGG - chr3.3:853585-853604 MS.gene53232:CDS 35.0%
GTCTCTAAACTTCAAAAGAG+AGG + chr3.3:854113-854132 None:intergenic 35.0%
GTGGGAAGTTTCTTGTATAT+CGG - chr3.3:854737-854756 MS.gene53232:intron 35.0%
GTTAAACGGTGATAAATGCA+AGG - chr3.3:856036-856055 MS.gene53232:CDS 35.0%
GTTTCTCTGCAATCCTAAAA+AGG - chr3.3:853056-853075 MS.gene53232:intron 35.0%
TAAAAAGGGGTTGTAGCTAT+AGG - chr3.3:853071-853090 MS.gene53232:intron 35.0%
TACCTATAAGCATAGTACTG+TGG - chr3.3:855769-855788 MS.gene53232:intron 35.0%
TAGAACCAAACTTCCAAAGA+GGG + chr3.3:852694-852713 None:intergenic 35.0%
TAGACCTTCATGAAAATGAG+TGG + chr3.3:852814-852833 None:intergenic 35.0%
TATTGAATTTGAGAATGGCC+TGG + chr3.3:853190-853209 None:intergenic 35.0%
TCCTGTCTTTCGAATATGAA+GGG - chr3.3:855555-855574 MS.gene53232:intron 35.0%
TGCGAAAGAAAACACACTTA+GGG + chr3.3:855088-855107 None:intergenic 35.0%
TGGATTCTGTAGATTTGCAA+GGG - chr3.3:854794-854813 MS.gene53232:intron 35.0%
TTAGAACCAAACTTCCAAAG+AGG + chr3.3:852695-852714 None:intergenic 35.0%
TTCATGCTCCAAAATTCTCA+AGG - chr3.3:854708-854727 MS.gene53232:intron 35.0%
TTCCTGTCTTTCGAATATGA+AGG - chr3.3:855554-855573 MS.gene53232:intron 35.0%
TTCTCTGCAATCCTAAAAAG+GGG - chr3.3:853058-853077 MS.gene53232:intron 35.0%
TTGCGAAAGAAAACACACTT+AGG + chr3.3:855089-855108 None:intergenic 35.0%
! ACTGCTTTCCTTGAGAATTT+TGG + chr3.3:854719-854738 None:intergenic 35.0%
! AGACCCATTCATTTTCATGA+AGG + chr3.3:853630-853649 None:intergenic 35.0%
! AGCATAATTGATTTCAACCC+TGG + chr3.3:855699-855718 None:intergenic 35.0%
! ATTGCTCTCCATTGCAATTT+TGG + chr3.3:855934-855953 None:intergenic 35.0%
! TATAGCTACAACCCCTTTTT+AGG + chr3.3:853072-853091 None:intergenic 35.0%
! TCTTTTATATGATCTGGAGG+AGG + chr3.3:852067-852086 None:intergenic 35.0%
! TGATGGTCTTACTTGGAAAT+TGG - chr3.3:855448-855467 MS.gene53232:intron 35.0%
!! GATGTTTGTTGTACACGTTT+AGG - chr3.3:855956-855975 MS.gene53232:intron 35.0%
!! TTCATGGTTAAAGGTGTTGT+AGG - chr3.3:853367-853386 MS.gene53232:CDS 35.0%
!!! GAACGAAAACAAGGGTTTTT+TGG + chr3.3:854525-854544 None:intergenic 35.0%
!!! GTTTTTTGGGTTGATTCCAT+TGG + chr3.3:854511-854530 None:intergenic 35.0%
!!! TGAGAATTTTGGAGCATGAA+CGG + chr3.3:854708-854727 None:intergenic 35.0%
!!! TTAGTACTTGGAGTTTTGAG+TGG + chr3.3:855635-855654 None:intergenic 35.0%
AAGAAACAAATAAGGAGCGG+CGG + chr3.3:853034-853053 None:intergenic 40.0%
AAGAAAGAGAACGAAGGAGA+AGG - chr3.3:853455-853474 MS.gene53232:intron 40.0%
AAGAGGGACGAAGGAAAATA+AGG + chr3.3:853164-853183 None:intergenic 40.0%
AATCCACTCGTAATTCGCAT+TGG + chr3.3:854780-854799 None:intergenic 40.0%
ACAACTTTGAGCTGATCAAG+AGG - chr3.3:854844-854863 MS.gene53232:intron 40.0%
ACCAGGAACATACTACACAA+TGG + chr3.3:854652-854671 None:intergenic 40.0%
AGAACCAAACTTCCAAAGAG+GGG + chr3.3:852693-852712 None:intergenic 40.0%
AGAAGGAAGAAAGAGAACGA+AGG - chr3.3:853449-853468 MS.gene53232:intron 40.0%
AGCGAGGACGCATAAATTTA+AGG + chr3.3:855844-855863 None:intergenic 40.0%
AGGAACATACTACACAATGG+AGG + chr3.3:854649-854668 None:intergenic 40.0%
AGGAGGGATAACAAAGATGA+AGG + chr3.3:852988-853007 None:intergenic 40.0%
ATCTTTGGGTCCAAGTGAAA+AGG + chr3.3:852852-852871 None:intergenic 40.0%
ATGGAACTGAAGAAATGTGG+CGG - chr3.3:854264-854283 MS.gene53232:intron 40.0%
CACCACAGTACTATGCTTAT+AGG + chr3.3:855774-855793 None:intergenic 40.0%
CACTGCTTCCAAAAGATCAA+AGG - chr3.3:854479-854498 MS.gene53232:intron 40.0%
CAGTTATACTATGAGAGGGA+GGG + chr3.3:855315-855334 None:intergenic 40.0%
GCTTCAGCTAAGTACATGTT+TGG + chr3.3:852621-852640 None:intergenic 40.0%
GTGAAGCTCCAAAATTGCAA+TGG - chr3.3:855923-855942 MS.gene53232:intron 40.0%
GTGGATTCTGTAGATTTGCA+AGG - chr3.3:854793-854812 MS.gene53232:intron 40.0%
TCAGTTATACTATGAGAGGG+AGG + chr3.3:855316-855335 None:intergenic 40.0%
TCCATTGTGTAGTATGTTCC+TGG - chr3.3:854648-854667 MS.gene53232:intron 40.0%
TCCCTTCATATTCGAAAGAC+AGG + chr3.3:855559-855578 None:intergenic 40.0%
TTACAACTTCGTCGTGTTTG+AGG - chr3.3:856088-856107 MS.gene53232:CDS 40.0%
TTCAAAACTCCGAGGACTAA+TGG - chr3.3:854432-854451 MS.gene53232:intron 40.0%
! AGACCCACTCATTTTCATGA+AGG - chr3.3:852807-852826 MS.gene53232:CDS 40.0%
! GTAACTTGTAACACAGCAAC+AGG + chr3.3:854873-854892 None:intergenic 40.0%
! GTGTCGATGTTCATGGTTAA+AGG - chr3.3:853358-853377 MS.gene53232:CDS 40.0%
! TGTTTTCGTTCCAAAGCCTT+TGG - chr3.3:854534-854553 MS.gene53232:intron 40.0%
! TTCATCTTTGTTATCCCTCC+TGG - chr3.3:852987-853006 MS.gene53232:intron 40.0%
!! AAGGCTTTGGAACGAAAACA+AGG + chr3.3:854534-854553 None:intergenic 40.0%
!! AGGCTTTGGAACGAAAACAA+GGG + chr3.3:854533-854552 None:intergenic 40.0%
!! TGTTCCTGGTGAATTTGCTA+AGG - chr3.3:854662-854681 MS.gene53232:intron 40.0%
!! TTTGGTTCTCCATTAGTCCT+CGG + chr3.3:854444-854463 None:intergenic 40.0%
AAGGTCTTCAGCGAAATGGT+AGG - chr3.3:853417-853436 MS.gene53232:intron 45.0%
ACACCAATGCGAATTACGAG+TGG - chr3.3:854774-854793 MS.gene53232:intron 45.0%
AGAAACAAATAAGGAGCGGC+GGG + chr3.3:853033-853052 None:intergenic 45.0%
AGATCAAAGGATGCTGCCAA+TGG - chr3.3:854492-854511 MS.gene53232:intron 45.0%
ATGATCTGGAGGAGGAAGTA+TGG + chr3.3:852059-852078 None:intergenic 45.0%
ATGGTAGGTCACAAGAGAGA+AGG - chr3.3:853432-853451 MS.gene53232:intron 45.0%
CGACGAAGTTGTAACACAAC+TGG + chr3.3:856082-856101 None:intergenic 45.0%
GAAGAAGGTCTTCAGCGAAA+TGG - chr3.3:853413-853432 MS.gene53232:CDS 45.0%
GATTCACCAAGTGAGGATCA+AGG - chr3.3:855722-855741 MS.gene53232:intron 45.0%
GCTACAGTTACTGTACCTGA+TGG - chr3.3:855431-855450 MS.gene53232:intron 45.0%
GTGCTCGGACACTTTATGTT+TGG + chr3.3:854462-854481 None:intergenic 45.0%
TATTGAATTGCAGGCGGAGA+AGG - chr3.3:855208-855227 MS.gene53232:intron 45.0%
TCCCTCCTGGTTTACATTTC+CGG - chr3.3:853000-853019 MS.gene53232:intron 45.0%
TCTGTTCCTTGATCCTCACT+TGG + chr3.3:855731-855750 None:intergenic 45.0%
TGCTCCTTAGCAAATTCACC+AGG + chr3.3:854669-854688 None:intergenic 45.0%
TGCTGATGATTCACCAAGTG+AGG - chr3.3:855715-855734 MS.gene53232:intron 45.0%
TGTTTGTCATGAATGGGCGA+GGG + chr3.3:855272-855291 None:intergenic 45.0%
TTGGAATCTTTCTCCGGTTC+CGG + chr3.3:852022-852041 None:intergenic 45.0%
TTGTTTGTCATGAATGGGCG+AGG + chr3.3:855273-855292 None:intergenic 45.0%
TTTCGTTCCAAAGCCTTTGG+CGG - chr3.3:854537-854556 MS.gene53232:intron 45.0%
! AAACAAACACGGAGTGTCCA+AGG - chr3.3:855660-855679 MS.gene53232:intron 45.0%
! ATTGGGTGTGTCGATGTTCA+TGG - chr3.3:853351-853370 MS.gene53232:CDS 45.0%
! CTGTACCTGATGGTCTTACT+TGG - chr3.3:855441-855460 MS.gene53232:intron 45.0%
! GCAACCAACACCTTTTCACT+TGG - chr3.3:852839-852858 MS.gene53232:CDS 45.0%
! GCAACCAACACCTTTTCACT+TGG + chr3.3:852858-852839 None:intergenic 45.0%
! GGCAGCATCCTTTGATCTTT+TGG + chr3.3:854490-854509 None:intergenic 45.0%
! GGTTGATTGAGCCTGTGTTT+TGG - chr3.3:852352-852371 MS.gene53232:CDS 45.0%
! GTAACCCCTCTTTGGAAGTT+TGG - chr3.3:852686-852705 MS.gene53232:CDS 45.0%
! GTGTCCAAGTGAAAAGGTGT+TGG - chr3.3:853591-853610 MS.gene53232:CDS 45.0%
!! GATCTTTTGGAAGCAGTGCT+CGG + chr3.3:854477-854496 None:intergenic 45.0%
!! TAAGGAGCATCTGAAGCCAA+AGG - chr3.3:854680-854699 MS.gene53232:intron 45.0%
!! ATATATATATATATATATAG+GGG + chr3.3:852748-852767 None:intergenic 5.0%
!! TATATATATATATATATATG+GGG - chr3.3:852773-852792 MS.gene53232:intron 5.0%
!!! AAAAATATAATTAATCTTTT+TGG - chr3.3:853765-853784 MS.gene53232:CDS 5.0%
!!! AGTATAATAATTTTATAAAT+AGG + chr3.3:853282-853301 None:intergenic 5.0%
AAGGCCTAGGAAAAGGTCCA+GGG - chr3.3:855679-855698 MS.gene53232:intron 50.0%
ACAAGTTACTGCGTCTCGCA+CGG - chr3.3:854884-854903 MS.gene53232:intron 50.0%
ACGACCATCGGGAACAGTAA+TGG + chr3.3:854235-854254 None:intergenic 50.0%
AGTGTCCAAGGCCTAGGAAA+AGG - chr3.3:855672-855691 MS.gene53232:intron 50.0%
ATATACTGCACAAGGGAGCG+AGG + chr3.3:855860-855879 None:intergenic 50.0%
ATATCCCACTCACGACCATC+GGG + chr3.3:854246-854265 None:intergenic 50.0%
ATGAATGGGCGAGGGAAGTA+TGG + chr3.3:855264-855283 None:intergenic 50.0%
CATATCCCACTCACGACCAT+CGG + chr3.3:854247-854266 None:intergenic 50.0%
CTGGTTTACATTTCCGGCGT+CGG - chr3.3:853006-853025 MS.gene53232:intron 50.0%
GAAACAAATAAGGAGCGGCG+GGG + chr3.3:853032-853051 None:intergenic 50.0%
GAGAAGATATGTTCCGTCGC+CGG - chr3.3:852000-852019 MS.gene53232:CDS 50.0%
GAGAATGGCCTGGAGAAAGA+GGG + chr3.3:853180-853199 None:intergenic 50.0%
GCCGGAAATGTAAACCAGGA+GGG + chr3.3:853004-853023 None:intergenic 50.0%
GCGACGGAACATATCTTCTC+CGG + chr3.3:852000-852019 None:intergenic 50.0%
GCTACCATTACTGTTCCCGA+TGG - chr3.3:854228-854247 MS.gene53232:intron 50.0%
GGAATTGAAGAAACGTGGGG+AGG - chr3.3:855469-855488 MS.gene53232:intron 50.0%
TATGTGGCGTGACGTGTGAA+CGG + chr3.3:855118-855137 None:intergenic 50.0%
TCTTACTGCACATCCGCCAA+AGG + chr3.3:854553-854572 None:intergenic 50.0%
TGAGAATGGCCTGGAGAAAG+AGG + chr3.3:853181-853200 None:intergenic 50.0%
TGGAGCATGAACGGAACCTT+TGG + chr3.3:854699-854718 None:intergenic 50.0%
! GGGTCCAAGTGAAAAGGTGT+TGG + chr3.3:852846-852865 None:intergenic 50.0%
! TCAACCCTGGACCTTTTCCT+AGG + chr3.3:855686-855705 None:intergenic 50.0%
ATATGTTCCGTCGCCGGAAC+CGG - chr3.3:852006-852025 MS.gene53232:CDS 55.0%
CAAGGCCTAGGAAAAGGTCC+AGG - chr3.3:855678-855697 MS.gene53232:intron 55.0%
CGACGCCGGAAATGTAAACC+AGG + chr3.3:853008-853027 None:intergenic 55.0%
CGATGGTCGTGAGTGGGATA+TGG - chr3.3:854245-854264 MS.gene53232:intron 55.0%
CGCCGGAAATGTAAACCAGG+AGG + chr3.3:853005-853024 None:intergenic 55.0%
GAATTGCAGGCGGAGAAGGA+AGG - chr3.3:855212-855231 MS.gene53232:intron 55.0%
TCCTTCGTCCCTCTTTCTCC+AGG - chr3.3:853169-853188 MS.gene53232:intron 55.0%
TGCACATCCGCCAAAGGCTT+TGG + chr3.3:854547-854566 None:intergenic 55.0%
TGTTCCCGATGGTCGTGAGT+GGG - chr3.3:854239-854258 MS.gene53232:intron 55.0%
! CTGGACCTTTTCCTAGGCCT+TGG + chr3.3:855680-855699 None:intergenic 55.0%
CTGTTCCCGATGGTCGTGAG+TGG - chr3.3:854238-854257 MS.gene53232:intron 60.0%
GCAGGCGGAGAAGGAAGGTA+GGG - chr3.3:855217-855236 MS.gene53232:intron 60.0%
GCCTGGAGAAAGAGGGACGA+AGG + chr3.3:853173-853192 None:intergenic 60.0%
TCTTTCTCCGGTTCCGGCGA+CGG + chr3.3:852016-852035 None:intergenic 60.0%
TGCAGGCGGAGAAGGAAGGT+AGG - chr3.3:855216-855235 MS.gene53232:intron 60.0%
! ACACGGAGTGTCCAAGGCCT+AGG - chr3.3:855666-855685 MS.gene53232:intron 60.0%
! AGGAGCGGCGGGGCCGACGC+CGG + chr3.3:853022-853041 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 851986 856108 851986 ID=MS.gene53232
chr3.3 mRNA 851986 856108 851986 ID=MS.gene53232.t1;Parent=MS.gene53232
chr3.3 exon 856004 856108 856004 ID=MS.gene53232.t1.exon1;Parent=MS.gene53232.t1
chr3.3 CDS 856004 856108 856004 ID=cds.MS.gene53232.t1;Parent=MS.gene53232.t1
chr3.3 exon 853528 853917 853528 ID=MS.gene53232.t1.exon2;Parent=MS.gene53232.t1
chr3.3 CDS 853528 853917 853528 ID=cds.MS.gene53232.t1;Parent=MS.gene53232.t1
chr3.3 exon 853189 853434 853189 ID=MS.gene53232.t1.exon3;Parent=MS.gene53232.t1
chr3.3 CDS 853189 853434 853189 ID=cds.MS.gene53232.t1;Parent=MS.gene53232.t1
chr3.3 exon 852799 852873 852799 ID=MS.gene53232.t1.exon4;Parent=MS.gene53232.t1
chr3.3 CDS 852799 852873 852799 ID=cds.MS.gene53232.t1;Parent=MS.gene53232.t1
chr3.3 exon 852304 852714 852304 ID=MS.gene53232.t1.exon5;Parent=MS.gene53232.t1
chr3.3 CDS 852304 852714 852304 ID=cds.MS.gene53232.t1;Parent=MS.gene53232.t1
chr3.3 exon 851986 852219 851986 ID=MS.gene53232.t1.exon6;Parent=MS.gene53232.t1
chr3.3 CDS 851986 852219 851986 ID=cds.MS.gene53232.t1;Parent=MS.gene53232.t1
Gene Sequence

>MS.gene53232

ATGAAGACTCACCGGAGAAGATATGTTCCGTCGCCGGAACCGGAGAAAGATTCCAAACATTTTATGAAAGCCATACTTCCTCCTCCAGATCATATAAAAGAGATAGTATGTTTCATTTTCTATCTCTCTCTCTCTCTCTTTTGATATTACTATCACTCTAACTGTCAAACTTTGAGGAATATATAATGCTCATACTTCTTAATTATTATATATGGATGATACTTCAAATATTTGTATAACTTTTGTCGAAATAATGTGTAGACTAGCCCTAACTTGTTTTTCTAAATCTAATACTATTTTTGTTATTTTTATTAATTATTAGTGTATGTTTGGTTCTAACGTTGTAAAATTTGATTTTGAAACTTTGGTTGATTGAGCCTGTGTTTTGGATTCATTGTTACTTTATCATTTTCATATCTCAAGACATGTCATTCTGCAGACTCACAGTCTCAGCATGATTTTAGCTAATAAACTGTAACACAAACTTAGATTGAGTTGAATCGGAAGTGACTTATATTTGATTAGATTTCCTTAATAATAAAGTTGAATCTAAAAATCATGTTTTGAGTCAAGGCGACAAGTTAGAATCTATTCTAGAGTCAAAATCAATGCTGCCTTCCACAAAAATGATTCCAAACATGTACTTAGCTGAAGCTCAGAATGAGAGTAGTAACTTAAATTGTGGAAATCTCATAAATGTGTAACCCCTCTTTGGAAGTTTGGTTCTAAATTGTAGTAATAACTATCTTTTGTTTTTAGTTACTATATATATATATATATATATATATATATATATATATATATATGGGGTTTGCTACAATAGACCCACTCATTTTCATGAAGGTCTATTTTAGCAACCAACACCTTTTCACTTGGACCCAAAGATCCTTGTTCTTATGTTTTTGAAAAATTAAAATTGAAGGGCAAAAAGATAATTTTCTCTTAATTCTTTTTATTTCCTATTATTTTTTCGAGAGCTGTCATTCTCTTTCTTCCTTACCTTCATCTTTGTTATCCCTCCTGGTTTACATTTCCGGCGTCGGCCCCGCCGCTCCTTATTTGTTTCTTTTGTTTCTCTGCAATCCTAAAAAGGGGTTGTAGCTATAGGTTTATTGGCATCTCAATGAATTAAATATTCAAGCATCTAACTCTCTTGCTGTAAATATATATTCAATCCTTATTTTCCTTCGTCCCTCTTTCTCCAGGCCATTCTCAAATTCAATAGGAATACATAATTGCTGGATTCAACAATAGCAAGATTGTGATAACTAATTTGATTATATGATATTCTAACCTATTTATAAAATTATTATACTAAAAAAACAATTTAATAAATTTCAGTGAATCAAATAAGCAAAAGAAATGATTGGGTGTGTCGATGTTCATGGTTAAAGGTGTTGTAGGAGCAAACAATTATGTGCAAGAGAGAAGAAGGTCTTCAGCGAAATGGTAGGTCACAAGAGAGAAGGAAGAAAGAGAACGAAGGAGAAGGAGAAGCTCTCGAAAAATGAAATGAGAAAAAAAAATGAAAAAACTGAAATTAAGTTAAAATTACATTTAGATCCTTTACTTTTAATTTTCCCAAAAACAAAAACAAGGGTAATTGTGTCCAAGTGAAAAGGTGTTGGTTGCTAAAATAGACCTTCATGAAAATGAATGGGTCTATTGTAGCAAACCCCTATATATATATATATATATATATATATATATATATATATATGTATGTATGTATGTATCATCACTCTTTGTTTTCTGCTAAATTCCTATTATCAATGTAACAAAAATATAATTAATCTTTTTGGAGTTGTTTTTGTTGCTAAGTATACGACTCTTTAACTGTGAAACTTTGAGGAATAATGCTCATTTACTAATTACACCTCTCTGTAAATGATATTATGTGCTTTGATTCAAACTAATATCTTTTTCTGAATTTGTTTGGACATTCAAGGTCATCACTTATTCTGTTTAAGTTTAATATCTTCTTAGTGTGTCTTTAGTTCTAAGGTTCTCAAAATGGATTCTGAATCTTTTATTCATTGTGTACAATAGTGAATCCAAACAAGAACTTTAGTTGAAGCTCTTTAAAATAGTTACTTAAATATTTGAAATTTCGTAAACATGTTACCTCTCTTTTGAAGTTTAGAGACCTATACTGTAACAGATGAGTTGTTAATATTTGTTATCACTGCAGAGAATTCCAGATGAGTTTATAACAAAATTTGGGAATGAACTCGACAATGTTGCTACCATTACTGTTCCCGATGGTCGTGAGTGGGATATGGAACTGAAGAAATGTGGCGGCCAAGTTTTCTTTTGCAAAAATTGGCAACAGTTTGCAGAATACTATTCTATTTATTATGGTTGTTATTTAGATTTCAAGTATGAAGGGAATTCAAAGTTTAATGTTGTTATATATGATACAACTTCTGTTGAGATTTCTTATTCATTCAAAACTCCGAGGACTAATGGAGAACCAAACATAAAGTGTCCGAGCACTGCTTCCAAAAGATCAAAGGATGCTGCCAATGGAATCAACCCAAAAAACCCTTGTTTTCGTTCCAAAGCCTTTGGCGGATGTGCAGTAAGAATTTTACTTTATAGTATTTGGTTTTGAAGTAAATGTTTGAGTTACATTTATGTTGTAGCTTAAATTGATTGCTCCTCCATTGTGTAGTATGTTCCTGGTGAATTTGCTAAGGAGCATCTGAAGCCAAAGGTTCCGTTCATGCTCCAAAATTCTCAAGGAAAGCAGTGGGAAGTTTCTTGTATATCGGAAAGAGCAAGAAAAACACCAATGCGAATTACGAGTGGATTCTGTAGATTTGCAAGGGAAAACAATCTATCAAAGGAAGTTTTTTACAACTTTGAGCTGATCAAGAGGAAGCCTGTTGCTGTGTTACAAGTTACTGCGTCTCGCACGGTAAAACTTTGTTTCACATTCGTTTATTCATCAATTATATATACTTTTTAACACTTTTTCCTTTATAATATTTGAACCGTTGTAGGTTTTTTAGTTACTAATAGCTATCATCAATGAGCAATATGGACCAGTGAATAAAATAATTTGCTTTATTCTTTCTCATTTTCTAATTTCAAATACCCTAAGTGTGTTTTCTTTCGCAACATAAACCGTTCACACGTCACGCCACATACGAGTTCATTATTATTTGTTTATAATGTGAATTGGTGATCTGAATGTGTGAAGCGTTAACACTTATCACTTATTGAATTGCAGGCGGAGAAGGAAGGTAGGGAATCCAAACATTTTAAGAAGGCCATACTTCCCTCGCCCATTCATGACAAACAAATAGTAAAACTCTCTCTCTCCCTCCCTCTCATAGTATAACTGATGAGTTATTTTATAATCAAATTAAACAAGTGATGATAACTGCAGAGAATTCCTGAAGATTTTATAACAATGTTTGGGAATGAACTCAAGAATGTTGCTACAGTTACTGTACCTGATGGTCTTACTTGGAAATTGGAATTGAAGAAACGTGGGGAGGATGTTTACTTTTGCAACAAATGGAAACAGTTTGCACAATACTATTCTTTAAGATACGGTTGCTTCCTGTCTTTCGAATATGAAGGGAATTCAAATTTTAGTGTTATTATATTTGATGTAACTTCTGTTGAGATTTGCTATCCACTCAAAACTCCAAGTACTAATGGAGAAACAAACACGGAGTGTCCAAGGCCTAGGAAAAGGTCCAGGGTTGAAATCAATTATGCTGATGATTCACCAAGTGAGGATCAAGGAACAGAAAACCCTTCTTTTACTTCTACCTATAAGCATAGTACTGTGGTGAGTGACGATTTTAGTTTTTAATTGATATATATATATATGTTGTTGTTCCTTAAATTTATGCGTCCTCGCTCCCTTGTGCAGTATATTAATGCTGATTTTGCATCAAAGTATCTGAAACGAAATGTTGTTGTGAAGCTCCAAAATTGCAATGGAGAGCAATGGGATGTTTGTTGTACACGTTTAGGTCGTTCAGGACTGCGATTGGGGAAAGGATTCTTTAAATTTGCAACGGACAACAATTTGTTAAACGGTGATAAATGCAAGGTTGAGTTGATTAAGAAATCGCCAGTTGTGTTACAACTTCGTCGTGTTTGA
Protein sequence

>MS.gene53232.t1

MKTHRRRYVPSPEPEKDSKHFMKAILPPPDHIKEIRIPDEFITKFGNELDNVATITVPDGREWDMELKKCGGQVFFCKNWQQFAEYYSIYYGCYLDFKYEGNSKFNVVIYDTTSVEISYSFKTPRTNGEPNIKCPSTASKRSKDAANGINPKNPCFRSKAFGGCAYVPGEFAKEHLKPKVPFMLQNSQGKQWEVSCISERARKTPMRITSGFCRFARENNLSKEVFYNFELIKRKPVAVLQVTASRTAEKEGRESKHFKKAILPSPIHDKQIRIPEDFITMFGNELKNVATVTVPDGLTWKLELKKRGEDVYFCNKWKQFAQYYSLRYGCFLSFEYEGNSNFSVIIFDVTSVEICYPLKTPSTNGETNTECPRPRKRSRVEINYADDSPSEDQGTENPSFTSTYKHSTVYINADFASKYLKRNVVVKLQNCNGEQWDVCCTRLGRSGLRLGKGFFKFATDNNLLNGDKCKVELIKKSPVVLQLRRV