Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53250.t1 | XP_003598052.1 | 97.3 | 113 | 3 | 0 | 1 | 113 | 140 | 252 | 3.10E-58 | 234.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53250.t1 | G7J060 | 97.3 | 113 | 3 | 0 | 1 | 113 | 140 | 252 | 2.2e-58 | 234.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050330 | MS.gene53250 | -0.804819 | 1.80E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene53250 | 0.806072 | 9.83E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene53250 | -0.802501 | 5.44E-49 | -1.69E-46 |
| MS.gene056087 | MS.gene53250 | 0.816328 | 5.85E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene53250 | -0.811046 | 8.51E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53250.t1 | MTR_3g005720 | 97.345 | 113 | 3 | 0 | 1 | 113 | 140 | 252 | 1.69e-77 | 231 |
| MS.gene53250.t1 | MTR_1g059970 | 41.593 | 113 | 58 | 4 | 4 | 113 | 160 | 267 | 7.54e-21 | 84.7 |
| MS.gene53250.t1 | MTR_1g059970 | 41.593 | 113 | 58 | 4 | 4 | 113 | 158 | 265 | 1.37e-20 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53250.t1 | AT4G10000 | 75.221 | 113 | 28 | 0 | 1 | 113 | 149 | 261 | 2.93e-61 | 190 |
| MS.gene53250.t1 | AT4G10000 | 75.221 | 113 | 28 | 0 | 1 | 113 | 149 | 261 | 2.93e-61 | 190 |
| MS.gene53250.t1 | AT5G03880 | 45.946 | 111 | 56 | 3 | 4 | 113 | 164 | 271 | 9.31e-26 | 98.6 |
Find 33 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACATTGTGGGAACGTTCT+AGG | 0.276954 | 3.3:-1162369 | MS.gene53250:CDS |
| GAGAACAGCTCCAGCTTTCT+AGG | 0.290385 | 3.3:+1162334 | None:intergenic |
| CTGTGTCTTACAGAACCTTT+AGG | 0.336282 | 3.3:+1163859 | None:intergenic |
| ATAGAAGAACATTATCTTAC+CGG | 0.352026 | 3.3:+1162298 | None:intergenic |
| AAATACTTGTTCGAGCGATA+TGG | 0.384640 | 3.3:-1162570 | MS.gene53250:CDS |
| AGAGAAGTGGTCAGAGAAAC+TGG | 0.386180 | 3.3:-1163838 | MS.gene53250:CDS |
| CTACCTGCTCGTAGAATTGT+TGG | 0.397799 | 3.3:+1162397 | None:intergenic |
| TAGGTATATCCTTGTCCTAA+AGG | 0.405408 | 3.3:-1163874 | MS.gene53250:CDS |
| TTCCTCATTGATCAAAATAG+TGG | 0.408697 | 3.3:-1163160 | MS.gene53250:CDS |
| TTACTTACTGCTTTCATACA+TGG | 0.414336 | 3.3:+1163132 | None:intergenic |
| AGAAGGGAGAAGTCCATCAT+TGG | 0.461743 | 3.3:-1162547 | MS.gene53250:CDS |
| GACATTGTGGGAACGTTCTA+GGG | 0.479537 | 3.3:-1162368 | MS.gene53250:CDS |
| CTCTACAGAAAGATCTAGTT+CGG | 0.482295 | 3.3:+1164383 | None:intergenic |
| AGCTCCAGCTTTCTAGGAGG+AGG | 0.503068 | 3.3:+1162340 | None:intergenic |
| CTCTCTAAAAGTCCCAATGA+TGG | 0.508740 | 3.3:+1162534 | None:intergenic |
| GAAGGGAGAAGTCCATCATT+GGG | 0.519221 | 3.3:-1162546 | MS.gene53250:CDS |
| TGAACCTCCTCCTAGAAAGC+TGG | 0.527393 | 3.3:-1162344 | MS.gene53250:CDS |
| TTGTTCGAGCGATATGGAGA+AGG | 0.531686 | 3.3:-1162564 | MS.gene53250:CDS |
| TTGCGCAGCACTATCTTCAC+TGG | 0.541182 | 3.3:-1162427 | MS.gene53250:intron |
| CGAACTAGATCTTTCTGTAG+AGG | 0.549352 | 3.3:-1164382 | MS.gene53250:intron |
| ACAATTCTACGAGCAGGTAG+AGG | 0.551144 | 3.3:-1162394 | MS.gene53250:CDS |
| AGGTAGAGGAATGACATTGT+GGG | 0.575168 | 3.3:-1162380 | MS.gene53250:CDS |
| ATGCCAACAATTCTACGAGC+AGG | 0.576106 | 3.3:-1162400 | MS.gene53250:CDS |
| AGAAAGATCTAGTTCGGTCA+TGG | 0.586988 | 3.3:+1164389 | None:intergenic |
| CTTACAGAACCTTTAGGACA+AGG | 0.591800 | 3.3:+1163865 | None:intergenic |
| TAGAAGAACATTATCTTACC+GGG | 0.597832 | 3.3:+1162299 | None:intergenic |
| TGTTCGAGCGATATGGAGAA+GGG | 0.616808 | 3.3:-1162563 | MS.gene53250:CDS |
| CAGGTAGAGGAATGACATTG+TGG | 0.629598 | 3.3:-1162381 | MS.gene53250:CDS |
| TTCTGTAAGACACAGAGAAG+TGG | 0.630500 | 3.3:-1163851 | MS.gene53250:CDS |
| AACAGCTCCAGCTTTCTAGG+AGG | 0.635879 | 3.3:+1162337 | None:intergenic |
| GCAGCACTATCTTCACTGGA+TGG | 0.651360 | 3.3:-1162423 | MS.gene53250:intron |
| GTTCTCCTATGAAAATAACC+CGG | 0.677731 | 3.3:-1162317 | MS.gene53250:CDS |
| GAAGTGGTCAGAGAAACTGG+TGG | 0.779819 | 3.3:-1163835 | MS.gene53250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGTTAAAATCATTAAAA+TGG | + | chr3.3:1164051-1164070 | None:intergenic | 10.0% |
| !!! | ACAAAATATTTTAAAAGATA+AGG | + | chr3.3:1163472-1163491 | None:intergenic | 10.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | + | chr3.3:1163797-1163816 | None:intergenic | 15.0% |
| !!! | ATATTTTCTCAAATTATTAC+TGG | + | chr3.3:1162578-1162597 | None:intergenic | 15.0% |
| !!! | ATTAAGAAAAAAACAGATTT+TGG | + | chr3.3:1163857-1163876 | None:intergenic | 15.0% |
| !! | AGAGATAAGAAAAAAGATAA+AGG | - | chr3.3:1163040-1163059 | MS.gene53250:intron | 20.0% |
| !! | CAATATAAGTAGAAAGAATA+AGG | + | chr3.3:1163605-1163624 | None:intergenic | 20.0% |
| !! | GAGATAAGAAAAAAGATAAA+GGG | - | chr3.3:1163041-1163060 | MS.gene53250:intron | 20.0% |
| !! | TTATTCATTTCCTTTATAAC+AGG | - | chr3.3:1162417-1162436 | MS.gene53250:CDS | 20.0% |
| !! | TTTCTACTTATATTGTTTAG+TGG | - | chr3.3:1163610-1163629 | MS.gene53250:intron | 20.0% |
| !!! | AAAAACAAAAGCTGTTTTTT+TGG | - | chr3.3:1162976-1162995 | MS.gene53250:intron | 20.0% |
| !!! | AAAACAAAAGCTGTTTTTTT+GGG | - | chr3.3:1162977-1162996 | MS.gene53250:intron | 20.0% |
| !!! | TGAAATAGATTTTCATTTTG+AGG | + | chr3.3:1163824-1163843 | None:intergenic | 20.0% |
| ! | ACCAACAGTAGTAATATTAA+GGG | + | chr3.3:1162794-1162813 | None:intergenic | 25.0% |
| ! | ATCATTAAAATGGACCATTA+AGG | + | chr3.3:1164041-1164060 | None:intergenic | 25.0% |
| ! | ATTCTAACTAACTATTCTCA+GGG | - | chr3.3:1163284-1163303 | MS.gene53250:intron | 25.0% |
| ! | GTAAACAACTATGAAAATGA+AGG | + | chr3.3:1163651-1163670 | None:intergenic | 25.0% |
| ! | TCATTAAAATGGACCATTAA+GGG | + | chr3.3:1164040-1164059 | None:intergenic | 25.0% |
| ! | TGGATTTAAATGGAATAGAA+CGG | - | chr3.3:1163132-1163151 | MS.gene53250:intron | 25.0% |
| ! | TTCATAGTTGTTTACTAGTT+TGG | - | chr3.3:1163656-1163675 | MS.gene53250:intron | 25.0% |
| !! | AAAAATACTTTGTGATGGAA+TGG | - | chr3.3:1163107-1163126 | MS.gene53250:intron | 25.0% |
| !! | ATTTTCAACATACTCATTCT+TGG | - | chr3.3:1163433-1163452 | MS.gene53250:intron | 25.0% |
| !!! | AAACAAAAGCTGTTTTTTTG+GGG | - | chr3.3:1162978-1162997 | MS.gene53250:intron | 25.0% |
| !!! | AGAGAGGTATACATATTTTA+GGG | - | chr3.3:1164179-1164198 | MS.gene53250:intron | 25.0% |
| !!! | ATTCCATCACAAAGTATTTT+TGG | + | chr3.3:1163108-1163127 | None:intergenic | 25.0% |
| !!! | TAGAGAGGTATACATATTTT+AGG | - | chr3.3:1164178-1164197 | MS.gene53250:intron | 25.0% |
| !!! | TAGTTAGAATGGCTATTTTT+GGG | + | chr3.3:1163274-1163293 | None:intergenic | 25.0% |
| !!! | TATCTTTTTTCTTATCTCTC+TGG | + | chr3.3:1163039-1163058 | None:intergenic | 25.0% |
| !!! | TCTGTTTTTTTCTTAATGCA+AGG | - | chr3.3:1163860-1163879 | MS.gene53250:CDS | 25.0% |
| !!! | TTAGTTAGAATGGCTATTTT+TGG | + | chr3.3:1163275-1163294 | None:intergenic | 25.0% |
| AACAACTATGAAAATGAAGG+TGG | + | chr3.3:1163648-1163667 | None:intergenic | 30.0% | |
| AATCATAGAGCCTGTTATAA+AGG | + | chr3.3:1162430-1162449 | None:intergenic | 30.0% | |
| ATGAAAATGAAGGTGGTTTA+TGG | + | chr3.3:1163641-1163660 | None:intergenic | 30.0% | |
| ATGAAAGCAGTAAGTAAGAA+AGG | - | chr3.3:1163570-1163589 | MS.gene53250:intron | 30.0% | |
| CACCAACAGTAGTAATATTA+AGG | + | chr3.3:1162795-1162814 | None:intergenic | 30.0% | |
| CATTCTAACTAACTATTCTC+AGG | - | chr3.3:1163283-1163302 | MS.gene53250:intron | 30.0% | |
| CTGAGAATAGTTAGTTAGAA+TGG | + | chr3.3:1163285-1163304 | None:intergenic | 30.0% | |
| CTTCCAAAAATACTTTGTGA+TGG | - | chr3.3:1163102-1163121 | MS.gene53250:intron | 30.0% | |
| GTGACTTGAGAAATGATTTA+TGG | - | chr3.3:1162748-1162767 | MS.gene53250:intron | 30.0% | |
| TAAATCATTTCTCAAGTCAC+AGG | + | chr3.3:1162748-1162767 | None:intergenic | 30.0% | |
| TCCCTTAATATTACTACTGT+TGG | - | chr3.3:1162790-1162809 | MS.gene53250:intron | 30.0% | |
| TTACTTACTGCTTTCATACA+TGG | + | chr3.3:1163567-1163586 | None:intergenic | 30.0% | |
| TTCCTCATTGATCAAAATAG+TGG | - | chr3.3:1163536-1163555 | MS.gene53250:intron | 30.0% | |
| TTGAATGTTGTGTACTTTCT+TGG | - | chr3.3:1164079-1164098 | MS.gene53250:intron | 30.0% | |
| ! | AGAAAGTACACAACATTCAA+TGG | + | chr3.3:1164079-1164098 | None:intergenic | 30.0% |
| ! | ATAACAGGCTCTATGATTTT+GGG | - | chr3.3:1162432-1162451 | MS.gene53250:intron | 30.0% |
| ! | CATAATGTTGTCCTTTTTGT+AGG | - | chr3.3:1163507-1163526 | MS.gene53250:intron | 30.0% |
| ! | CTATTGAAGTTGTTATTCCA+GGG | + | chr3.3:1163370-1163389 | None:intergenic | 30.0% |
| ! | TATAACAGGCTCTATGATTT+TGG | - | chr3.3:1162431-1162450 | MS.gene53250:intron | 30.0% |
| !! | CTACTGTTGGTGTTATTAAT+AGG | - | chr3.3:1162803-1162822 | MS.gene53250:intron | 30.0% |
| !!! | AACAAAAGCTGTTTTTTTGG+GGG | - | chr3.3:1162979-1162998 | MS.gene53250:intron | 30.0% |
| !!! | CTATTTTGATCAATGAGGAA+AGG | + | chr3.3:1163536-1163555 | None:intergenic | 30.0% |
| AAAACAAACATGCCCTAAGA+AGG | + | chr3.3:1163688-1163707 | None:intergenic | 35.0% | |
| AAATACTTGTTCGAGCGATA+TGG | - | chr3.3:1164126-1164145 | MS.gene53250:intron | 35.0% | |
| AACACTAGATTCAACTGCTA+TGG | + | chr3.3:1162466-1162485 | None:intergenic | 35.0% | |
| AGGAAAGGAAACCTACAAAA+AGG | + | chr3.3:1163521-1163540 | None:intergenic | 35.0% | |
| ATGAAACACTGACACAAACA+TGG | - | chr3.3:1162523-1162542 | MS.gene53250:intron | 35.0% | |
| CCTGGAATAACAACTTCAAT+AGG | - | chr3.3:1163368-1163387 | MS.gene53250:intron | 35.0% | |
| CTCTACAGAAAGATCTAGTT+CGG | + | chr3.3:1162316-1162335 | None:intergenic | 35.0% | |
| GTTCTCCTATGAAAATAACC+CGG | - | chr3.3:1164379-1164398 | MS.gene53250:intron | 35.0% | |
| TAGGTATATCCTTGTCCTAA+AGG | - | chr3.3:1162822-1162841 | MS.gene53250:intron | 35.0% | |
| TTGTGTATGTGATGAATCTG+CGG | + | chr3.3:1162344-1162363 | None:intergenic | 35.0% | |
| ! | CCTATTGAAGTTGTTATTCC+AGG | + | chr3.3:1163371-1163390 | None:intergenic | 35.0% |
| ! | CTTTCTTGGTTTCTTGTTGT+AGG | - | chr3.3:1164093-1164112 | MS.gene53250:intron | 35.0% |
| ! | TAACAGGCTCTATGATTTTG+GGG | - | chr3.3:1162433-1162452 | MS.gene53250:intron | 35.0% |
| ! | TGGAATGGAGTGGATTTAAA+TGG | - | chr3.3:1163122-1163141 | MS.gene53250:intron | 35.0% |
| ! | TTCTTAGGGCATGTTTGTTT+TGG | - | chr3.3:1163687-1163706 | MS.gene53250:intron | 35.0% |
| !! | AGTTTGGATTAGTCCTTCTT+AGG | - | chr3.3:1163672-1163691 | MS.gene53250:intron | 35.0% |
| !! | GAGGTATACATATTTTAGGG+AGG | - | chr3.3:1164182-1164201 | MS.gene53250:intron | 35.0% |
| !! | GTTTGGATTAGTCCTTCTTA+GGG | - | chr3.3:1163673-1163692 | MS.gene53250:intron | 35.0% |
| !! | TCTTACCGGGTTATTTTCAT+AGG | + | chr3.3:1164387-1164406 | None:intergenic | 35.0% |
| !! | TTTTATATGCTGATTGACCC+TGG | - | chr3.3:1163350-1163369 | MS.gene53250:intron | 35.0% |
| !! | TTTTGGGTGGTTAGTGTTAA+AGG | + | chr3.3:1163258-1163277 | None:intergenic | 35.0% |
| !!! | CACCACTATTTTGATCAATG+AGG | + | chr3.3:1163541-1163560 | None:intergenic | 35.0% |
| !!! | TTAGAATGGCTATTTTTGGG+TGG | + | chr3.3:1163271-1163290 | None:intergenic | 35.0% |
| !!! | TTTTTTTGGGGGTATCTGTT+AGG | - | chr3.3:1162990-1163009 | MS.gene53250:intron | 35.0% |
| ACGGAGTTATCACTCTATGA+TGG | - | chr3.3:1163151-1163170 | MS.gene53250:CDS | 40.0% | |
| AGGTAGAGGAATGACATTGT+GGG | - | chr3.3:1164316-1164335 | MS.gene53250:intron | 40.0% | |
| CAACATTCACAAATTGGCCA+GGG | + | chr3.3:1163216-1163235 | None:intergenic | 40.0% | |
| CGAACTAGATCTTTCTGTAG+AGG | - | chr3.3:1162314-1162333 | MS.gene53250:CDS | 40.0% | |
| CGCAAGAGTGAGTTATTATG+AGG | + | chr3.3:1164254-1164273 | None:intergenic | 40.0% | |
| CTGTGTCTTACAGAACCTTT+AGG | + | chr3.3:1162840-1162859 | None:intergenic | 40.0% | |
| TGAAACAAACGCACCCTTAA+TGG | - | chr3.3:1164024-1164043 | MS.gene53250:intron | 40.0% | |
| TGCAGCCAACATTCACAAAT+TGG | + | chr3.3:1163222-1163241 | None:intergenic | 40.0% | |
| TTCTGTAAGACACAGAGAAG+TGG | - | chr3.3:1162845-1162864 | MS.gene53250:intron | 40.0% | |
| ! | ACACCTTCAATCTGAAGTGT+TGG | - | chr3.3:1162664-1162683 | MS.gene53250:intron | 40.0% |
| ! | CTCTCTAAAAGTCCCAATGA+TGG | + | chr3.3:1164165-1164184 | None:intergenic | 40.0% |
| ! | GGATTTTATGACAACTTCCC+TGG | - | chr3.3:1163196-1163215 | MS.gene53250:intron | 40.0% |
| ! | TACTTTGTGATGGAATGGAG+TGG | - | chr3.3:1163112-1163131 | MS.gene53250:intron | 40.0% |
| !! | ATTGAAGGTGTTTCCAGTGT+CGG | + | chr3.3:1162655-1162674 | None:intergenic | 40.0% |
| !! | CATCATTGGGACTTTTAGAG+AGG | - | chr3.3:1164163-1164182 | MS.gene53250:intron | 40.0% |
| !! | CTTACAGAACCTTTAGGACA+AGG | + | chr3.3:1162834-1162853 | None:intergenic | 40.0% |
| ACAATTCTACGAGCAGGTAG+AGG | - | chr3.3:1164302-1164321 | MS.gene53250:intron | 45.0% | |
| AGAAGGGAGAAGTCCATCAT+TGG | - | chr3.3:1164149-1164168 | MS.gene53250:intron | 45.0% | |
| AGAGAAGTGGTCAGAGAAAC+TGG | - | chr3.3:1162858-1162877 | MS.gene53250:intron | 45.0% | |
| ATGCCAACAATTCTACGAGC+AGG | - | chr3.3:1164296-1164315 | MS.gene53250:intron | 45.0% | |
| CAGGTAGAGGAATGACATTG+TGG | - | chr3.3:1164315-1164334 | MS.gene53250:intron | 45.0% | |
| CCAACATTCACAAATTGGCC+AGG | + | chr3.3:1163217-1163236 | None:intergenic | 45.0% | |
| CCTGGCCAATTTGTGAATGT+TGG | - | chr3.3:1163214-1163233 | MS.gene53250:intron | 45.0% | |
| CTACCTGCTCGTAGAATTGT+TGG | + | chr3.3:1164302-1164321 | None:intergenic | 45.0% | |
| GAAGGGAGAAGTCCATCATT+GGG | - | chr3.3:1164150-1164169 | MS.gene53250:intron | 45.0% | |
| GACATTGTGGGAACGTTCTA+GGG | - | chr3.3:1164328-1164347 | MS.gene53250:intron | 45.0% | |
| GCACCAACACTTCAGATTGA+AGG | + | chr3.3:1162670-1162689 | None:intergenic | 45.0% | |
| TGACATTGTGGGAACGTTCT+AGG | - | chr3.3:1164327-1164346 | MS.gene53250:intron | 45.0% | |
| TGTTCGAGCGATATGGAGAA+GGG | - | chr3.3:1164133-1164152 | MS.gene53250:intron | 45.0% | |
| TTGTTCGAGCGATATGGAGA+AGG | - | chr3.3:1164132-1164151 | MS.gene53250:intron | 45.0% | |
| ! | ATCACTCTATGATGGTGCCA+TGG | - | chr3.3:1163159-1163178 | MS.gene53250:CDS | 45.0% |
| ! | GTGTCGTGTCATTGTTGTGT+CGG | - | chr3.3:1162626-1162645 | MS.gene53250:intron | 45.0% |
| AACAGCTCCAGCTTTCTAGG+AGG | + | chr3.3:1164362-1164381 | None:intergenic | 50.0% | |
| GAAGTGGTCAGAGAAACTGG+TGG | - | chr3.3:1162861-1162880 | MS.gene53250:intron | 50.0% | |
| GAGAACAGCTCCAGCTTTCT+AGG | + | chr3.3:1164365-1164384 | None:intergenic | 50.0% | |
| GCAGCACTATCTTCACTGGA+TGG | - | chr3.3:1164273-1164292 | MS.gene53250:intron | 50.0% | |
| GCCATGGTAGATTACAGTGG+CGG | - | chr3.3:1163175-1163194 | MS.gene53250:intron | 50.0% | |
| TCCGCCACTGTAATCTACCA+TGG | + | chr3.3:1163179-1163198 | None:intergenic | 50.0% | |
| TGAACCTCCTCCTAGAAAGC+TGG | - | chr3.3:1164352-1164371 | MS.gene53250:intron | 50.0% | |
| TTGCGCAGCACTATCTTCAC+TGG | - | chr3.3:1164269-1164288 | MS.gene53250:intron | 50.0% | |
| ! | GGTGCCATGGTAGATTACAG+TGG | - | chr3.3:1163172-1163191 | MS.gene53250:intron | 50.0% |
| ! | AGCTCCAGCTTTCTAGGAGG+AGG | + | chr3.3:1164359-1164378 | None:intergenic | 55.0% |
| ! | GTTGTGTCGGTGTCCGACAC+TGG | - | chr3.3:1162639-1162658 | MS.gene53250:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 1162309 | 1164409 | 1162309 | ID=MS.gene53250 |
| chr3.3 | mRNA | 1162309 | 1164409 | 1162309 | ID=MS.gene53250.t1;Parent=MS.gene53250 |
| chr3.3 | exon | 1164383 | 1164409 | 1164383 | ID=MS.gene53250.t1.exon1;Parent=MS.gene53250.t1 |
| chr3.3 | CDS | 1164383 | 1164409 | 1164383 | ID=cds.MS.gene53250.t1;Parent=MS.gene53250.t1 |
| chr3.3 | exon | 1163826 | 1163893 | 1163826 | ID=MS.gene53250.t1.exon2;Parent=MS.gene53250.t1 |
| chr3.3 | CDS | 1163826 | 1163893 | 1163826 | ID=cds.MS.gene53250.t1;Parent=MS.gene53250.t1 |
| chr3.3 | exon | 1163140 | 1163189 | 1163140 | ID=MS.gene53250.t1.exon3;Parent=MS.gene53250.t1 |
| chr3.3 | CDS | 1163140 | 1163189 | 1163140 | ID=cds.MS.gene53250.t1;Parent=MS.gene53250.t1 |
| chr3.3 | exon | 1162534 | 1162603 | 1162534 | ID=MS.gene53250.t1.exon4;Parent=MS.gene53250.t1 |
| chr3.3 | CDS | 1162534 | 1162603 | 1162534 | ID=cds.MS.gene53250.t1;Parent=MS.gene53250.t1 |
| chr3.3 | exon | 1162309 | 1162441 | 1162309 | ID=MS.gene53250.t1.exon5;Parent=MS.gene53250.t1 |
| chr3.3 | CDS | 1162309 | 1162441 | 1162309 | ID=cds.MS.gene53250.t1;Parent=MS.gene53250.t1 |
| Gene Sequence |
| Protein sequence |
