Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54522.t1 | KEH21585.1 | 91.3 | 920 | 69 | 5 | 1 | 910 | 1 | 919 | 0.00E+00 | 1224.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54522.t1 | A0A072U6U7 | 91.3 | 920 | 69 | 5 | 1 | 910 | 1 | 919 | 0.0e+00 | 1224.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049887 | MS.gene54522 | 0.82089 | 5.40E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene54522 | 0.809914 | 1.50E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene54522 | 0.813993 | 1.93E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene54522 | 0.812614 | 3.88E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene54522 | 0.805533 | 1.27E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene54522 | 0.814159 | 1.78E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene54522 | 0.824095 | 9.72E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene54522 | 0.825881 | 3.68E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene54522 | -0.811401 | 7.13E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene54522 | -0.816162 | 6.37E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54522.t1 | MTR_7g007880 | 91.522 | 920 | 67 | 5 | 1 | 910 | 1 | 919 | 0.0 | 1654 |
| MS.gene54522.t1 | MTR_4g100530 | 31.387 | 274 | 131 | 6 | 27 | 293 | 33 | 256 | 4.25e-27 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54522.t1 | AT3G60380 | 35.000 | 280 | 128 | 15 | 47 | 320 | 51 | 282 | 8.78e-28 | 120 |
| MS.gene54522.t1 | AT4G16790 | 45.133 | 113 | 40 | 4 | 17 | 110 | 9 | 118 | 1.52e-17 | 87.0 |
Find 185 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAATTCTGATGATAATTT+TGG | 0.153084 | 7.4:+91086488 | MS.gene54522:CDS |
| GGTAAATATTTCAATGAAAA+TGG | 0.170433 | 7.4:+91086710 | MS.gene54522:CDS |
| GTGAGTGAAGATAGGGAATT+TGG | 0.171279 | 7.4:+91086779 | MS.gene54522:CDS |
| TTTCTCATCCTTCGCATTTC+AGG | 0.172291 | 7.4:+91087818 | MS.gene54522:CDS |
| CAAATTAGGCTTCAGAAAAT+TGG | 0.181564 | 7.4:+91088675 | MS.gene54522:CDS |
| CTCCCATAACTTGGTGAGTA+TGG | 0.203790 | 7.4:-91086186 | None:intergenic |
| ATTGGCATTGTTGTTGCTTA+TGG | 0.216714 | 7.4:+91086227 | MS.gene54522:CDS |
| GGATATGGATCCTTCGAATT+TGG | 0.219322 | 7.4:+91086802 | MS.gene54522:CDS |
| TCCACACTCTTTGATGGTTC+TGG | 0.237883 | 7.4:-91088519 | None:intergenic |
| AAAGTTTATGGCAATGTTAA+TGG | 0.239124 | 7.4:+91086920 | MS.gene54522:CDS |
| CAGTTTCCAAGTGGAAGATT+TGG | 0.252607 | 7.4:+91087666 | MS.gene54522:CDS |
| AATGGAAGTGATTCGAGTTT+AGG | 0.267445 | 7.4:+91086728 | MS.gene54522:CDS |
| GCCGGTTCGAAGTTTGAAAT+TGG | 0.274827 | 7.4:+91086664 | MS.gene54522:CDS |
| AAATTCATATCTTCAGAAAA+AGG | 0.291831 | 7.4:-91087712 | None:intergenic |
| TGAGTTTCATCAACAGATAT+TGG | 0.296093 | 7.4:-91087841 | None:intergenic |
| TCTGAATATGTCAATGATTC+AGG | 0.303389 | 7.4:+91088597 | MS.gene54522:CDS |
| AATCTGCTGCAGGAAGGTTT+AGG | 0.306637 | 7.4:+91087973 | MS.gene54522:CDS |
| AAGATTTCTCAGGTGTCTTC+AGG | 0.307288 | 7.4:+91087757 | MS.gene54522:CDS |
| TTAATGGTCCTTTGCAGTTT+CGG | 0.311571 | 7.4:+91086936 | MS.gene54522:CDS |
| AAGTCTTCCACACTCTTTGA+TGG | 0.315244 | 7.4:-91088525 | None:intergenic |
| GAATTTCCAAGAGGTGGATT+TGG | 0.315604 | 7.4:+91087729 | MS.gene54522:CDS |
| TCATAAACCTCTTGGATTGC+CGG | 0.316554 | 7.4:+91086646 | MS.gene54522:CDS |
| AGATAGGGAATTTGGGGATA+TGG | 0.328683 | 7.4:+91086787 | MS.gene54522:CDS |
| AGAGCCAGTGGATTGCCTTC+AGG | 0.329099 | 7.4:+91088285 | MS.gene54522:CDS |
| TGAGTGAAGATAGGGAATTT+GGG | 0.332634 | 7.4:+91086780 | MS.gene54522:CDS |
| TTTGCAGTTTCGGCCTCTTT+CGG | 0.347517 | 7.4:+91086946 | MS.gene54522:CDS |
| ATCTGCTGCAGGAAGGTTTA+GGG | 0.351977 | 7.4:+91087974 | MS.gene54522:CDS |
| GGTTGGATGTGAGTGAAGAT+AGG | 0.353006 | 7.4:+91086771 | MS.gene54522:CDS |
| AACGAAACCTCATCATGATT+TGG | 0.365971 | 7.4:-91088471 | None:intergenic |
| TACTTTGGTAATGTTGAATC+TGG | 0.366581 | 7.4:+91086611 | MS.gene54522:CDS |
| TTCAGAAAATATGAATTTCC+AGG | 0.367259 | 7.4:+91087591 | MS.gene54522:CDS |
| ATTATTATTATCACTATCAT+TGG | 0.371573 | 7.4:-91086282 | None:intergenic |
| AGTTTCCAAGTGGAAGATTT+GGG | 0.373912 | 7.4:+91087667 | MS.gene54522:CDS |
| TTCAAGTTCACCTTCATCTT+CGG | 0.377766 | 7.4:+91088044 | MS.gene54522:CDS |
| CGCCTATTGACTGGAATTTG+AGG | 0.384681 | 7.4:+91086876 | MS.gene54522:CDS |
| TTCAGAAAACATGAATTTCC+AGG | 0.385867 | 7.4:+91087552 | MS.gene54522:CDS |
| CCAGGTTCAAAGCTCAAATT+AGG | 0.386811 | 7.4:+91088661 | MS.gene54522:CDS |
| GGATTCCTATGCGCCTGCTT+TGG | 0.386937 | 7.4:+91087159 | MS.gene54522:CDS |
| AGAATAAGATGATGCATTGT+TGG | 0.390686 | 7.4:+91086390 | MS.gene54522:CDS |
| GAACTAATGTGGTTCAATCT+TGG | 0.391643 | 7.4:+91086543 | MS.gene54522:CDS |
| TTTGATGATGCTGCTGTTGA+TGG | 0.397886 | 7.4:+91086833 | MS.gene54522:CDS |
| CTTCTCCTTCGCCTATTGAC+TGG | 0.400771 | 7.4:+91086867 | MS.gene54522:CDS |
| GAATTTCCAGGAGGAAGATA+TGG | 0.401681 | 7.4:+91087603 | MS.gene54522:CDS |
| TCTTTGGTGACAACAATGTT+AGG | 0.406561 | 7.4:+91088727 | MS.gene54522:CDS |
| ACCAATTTCAAACTTCGAAC+CGG | 0.407112 | 7.4:-91086665 | None:intergenic |
| AACCCATACTCACCAAGTTA+TGG | 0.407274 | 7.4:+91086183 | MS.gene54522:CDS |
| AAATGGCTGCAATGAAGTTT+CGG | 0.412708 | 7.4:-91088079 | None:intergenic |
| GCAGCAGGCGAGGATCCACC+TGG | 0.417494 | 7.4:+91088165 | MS.gene54522:CDS |
| ACCCATACTCACCAAGTTAT+GGG | 0.418982 | 7.4:+91086184 | MS.gene54522:CDS |
| GAATTTGAGGTTTGGAAGGA+TGG | 0.427164 | 7.4:+91086889 | MS.gene54522:CDS |
| GAGCCAGTGGATTGCCTTCA+GGG | 0.430324 | 7.4:+91088286 | MS.gene54522:CDS |
| TCTTTAAGAAACAGAAGAAT+AGG | 0.440185 | 7.4:+91087328 | MS.gene54522:CDS |
| GTTGTTGGTCATAAACCTCT+TGG | 0.443170 | 7.4:+91086638 | MS.gene54522:CDS |
| AATGAAACGATGGAACTTAG+AGG | 0.445509 | 7.4:+91087781 | MS.gene54522:CDS |
| TTCACGGTCTTTGCAGTCTG+TGG | 0.446276 | 7.4:+91087879 | MS.gene54522:CDS |
| GTTGATGAGACTAAGTTTGA+AGG | 0.446350 | 7.4:+91086968 | MS.gene54522:CDS |
| ATTGACTGGAATTTGAGGTT+TGG | 0.447923 | 7.4:+91086881 | MS.gene54522:CDS |
| AACAGAAGAATAGGTACTAA+AGG | 0.453480 | 7.4:+91087337 | MS.gene54522:CDS |
| GATTCAACATTACCAAAGTA+AGG | 0.453587 | 7.4:-91086608 | None:intergenic |
| AACTTGAATCACGTATTTCA+CGG | 0.455012 | 7.4:+91087863 | MS.gene54522:CDS |
| GTCTAGCAAAAGCTCTATCA+AGG | 0.459498 | 7.4:+91088241 | MS.gene54522:CDS |
| ATCAAAGAGTGTGGAAGACT+TGG | 0.462435 | 7.4:+91088527 | MS.gene54522:CDS |
| GGTGATGCATGGTTTGCATT+CGG | 0.464325 | 7.4:+91088200 | MS.gene54522:CDS |
| AAGAATAAAAGTGGGGCAGC+AGG | 0.464507 | 7.4:+91088150 | MS.gene54522:CDS |
| TTCTTCTGTTTCTTAAAGAA+CGG | 0.470922 | 7.4:-91087324 | None:intergenic |
| GAGGCGTTCTTCTAAGAGGT+TGG | 0.470996 | 7.4:+91086754 | MS.gene54522:CDS |
| GTTGAATCTGGTGAGGTTGT+TGG | 0.471593 | 7.4:+91086623 | MS.gene54522:CDS |
| CCTAATTTGAGCTTTGAACC+TGG | 0.471755 | 7.4:-91088661 | None:intergenic |
| CGAAGAAATGAGACAACAAA+AGG | 0.474563 | 7.4:+91087135 | MS.gene54522:CDS |
| TTCGTTTGATTCAATTGCAT+CGG | 0.475854 | 7.4:+91087087 | MS.gene54522:CDS |
| GTTGCTGTATCAACATTATC+CGG | 0.475864 | 7.4:-91088369 | None:intergenic |
| AAGTATGCATATCTTGCTCC+TGG | 0.482551 | 7.4:-91087570 | None:intergenic |
| TTAGTTCCACAACTTCCTCT+TGG | 0.482985 | 7.4:-91087507 | None:intergenic |
| ACAGAAGAATAGGTACTAAA+GGG | 0.484475 | 7.4:+91087338 | MS.gene54522:CDS |
| GGATCAATTGAAAGATCAAA+AGG | 0.485031 | 7.4:+91088696 | MS.gene54522:CDS |
| AATCAGATCTTCTATTCAAA+GGG | 0.490078 | 7.4:+91088418 | MS.gene54522:CDS |
| GTGAAGAAGCTCCCATAACT+TGG | 0.491959 | 7.4:-91086195 | None:intergenic |
| TTCTGATGAAACAGAATCTA+CGG | 0.492039 | 7.4:-91087944 | None:intergenic |
| TTTGGTGACGAAGATTTCTC+AGG | 0.492364 | 7.4:+91087747 | MS.gene54522:CDS |
| GAGACTAAGTTTGAAGGACT+TGG | 0.494783 | 7.4:+91086974 | MS.gene54522:CDS |
| GTGATTCGAGTTTAGGTTCG+AGG | 0.496075 | 7.4:+91086735 | MS.gene54522:CDS |
| AATTGTTTCTCCAAATTCGA+AGG | 0.496848 | 7.4:-91086812 | None:intergenic |
| GTTGGATGTGAGTGAAGATA+GGG | 0.500698 | 7.4:+91086772 | MS.gene54522:CDS |
| CAACAATGCCAATGAAAAGA+AGG | 0.500909 | 7.4:-91086217 | None:intergenic |
| GTTGTTGCTCAACCTTACTT+TGG | 0.502927 | 7.4:+91086596 | MS.gene54522:CDS |
| GAGGTTTGGAAGGATGGAAA+GGG | 0.502944 | 7.4:+91086895 | MS.gene54522:CDS |
| GATGACTTCAAGAATAAAAG+TGG | 0.503221 | 7.4:+91088141 | MS.gene54522:CDS |
| AACCTCAAATTCCAGTCAAT+AGG | 0.503632 | 7.4:-91086878 | None:intergenic |
| GAATCAGATCTTCTATTCAA+AGG | 0.504619 | 7.4:+91088417 | MS.gene54522:CDS |
| TGTGCTCCATATCTTCCTCC+TGG | 0.504788 | 7.4:-91087609 | None:intergenic |
| TTTGTCCCAAATCTTCCACT+TGG | 0.505382 | 7.4:-91087672 | None:intergenic |
| ATGATGCATTGTTGGAATGA+TGG | 0.506708 | 7.4:+91086398 | MS.gene54522:CDS |
| TCACAGTTCTCTTCTAATAC+CGG | 0.507870 | 7.4:+91087007 | MS.gene54522:CDS |
| TCACAGCCTTTCCAGTCGAC+AGG | 0.508127 | 7.4:+91087418 | MS.gene54522:CDS |
| CAATCACAAAACCCCATTTG+CGG | 0.508858 | 7.4:+91086036 | MS.gene54522:CDS |
| AAATCATGATGAGGTTTCGT+TGG | 0.512566 | 7.4:+91088473 | MS.gene54522:CDS |
| TCGTGTAGCAAGCTAACAAA+TGG | 0.514352 | 7.4:-91088096 | None:intergenic |
| TTAGTCTCATCAACCGAAAG+AGG | 0.514488 | 7.4:-91086959 | None:intergenic |
| TCGTCACCAAATCCACCTCT+TGG | 0.514863 | 7.4:-91087735 | None:intergenic |
| TGCATCGGATAATATCAATA+CGG | 0.515611 | 7.4:+91087102 | MS.gene54522:CDS |
| TCACGGTCTTTGCAGTCTGT+GGG | 0.516041 | 7.4:+91087880 | MS.gene54522:CDS |
| TAGCAAGCAAGCCGATGAAA+AGG | 0.516544 | 7.4:+91088332 | MS.gene54522:CDS |
| CACCTTCATCTTCGGCTGGA+AGG | 0.516871 | 7.4:+91088052 | MS.gene54522:CDS |
| TAACAAGCTTGAGAGCCTCC+AGG | 0.518168 | 7.4:+91088551 | MS.gene54522:CDS |
| CGCGAGAATGTATTCTTCGA+TGG | 0.519673 | 7.4:+91087456 | MS.gene54522:CDS |
| GCATCGGATAATATCAATAC+GGG | 0.522599 | 7.4:+91087103 | MS.gene54522:CDS |
| TGAGGTTTGGAAGGATGGAA+AGG | 0.525509 | 7.4:+91086894 | MS.gene54522:CDS |
| AGAAAATATGAATCTGCTGC+AGG | 0.525664 | 7.4:+91087963 | MS.gene54522:CDS |
| AGTTCACCTTCATCTTCGGC+TGG | 0.527199 | 7.4:+91088048 | MS.gene54522:CDS |
| GTTCGAGGCGTTCTTCTAAG+AGG | 0.528027 | 7.4:+91086750 | MS.gene54522:CDS |
| GGGGAAAAGAAGAGCTTGCA+TGG | 0.528358 | 7.4:+91087994 | MS.gene54522:CDS |
| ATCACCGGCTCTTTGTTCCC+AGG | 0.529538 | 7.4:-91088183 | None:intergenic |
| TCCCATAACTTGGTGAGTAT+GGG | 0.529608 | 7.4:-91086185 | None:intergenic |
| GTTTGCATTCGGACTCAGAC+AGG | 0.534931 | 7.4:+91088211 | MS.gene54522:CDS |
| AAGCTAGTGAATTTATCGCC+AGG | 0.536727 | 7.4:+91088643 | MS.gene54522:CDS |
| GATGCTGCTGTTGATGGTGG+TGG | 0.538553 | 7.4:+91086839 | MS.gene54522:CDS |
| TGAAGAAGACGAAGAAGAAG+AGG | 0.540768 | 7.4:-91088025 | None:intergenic |
| GAATGCAAACCATGCATCAC+CGG | 0.546167 | 7.4:-91088198 | None:intergenic |
| AGATATGAATTTCCAAGAGG+TGG | 0.552888 | 7.4:+91087723 | MS.gene54522:CDS |
| AACAAAGAGCCGGTGATGCA+TGG | 0.552911 | 7.4:+91088189 | MS.gene54522:CDS |
| CGTCCCTGAAGGCAATCCAC+TGG | 0.554415 | 7.4:-91088289 | None:intergenic |
| TGGAATGATGGGTCTAATGA+GGG | 0.558146 | 7.4:+91086410 | MS.gene54522:CDS |
| GTTTCTTAAAGAACGGCCCT+CGG | 0.558308 | 7.4:-91087317 | None:intergenic |
| ATAACTTGGTGAGTATGGGT+TGG | 0.559562 | 7.4:-91086181 | None:intergenic |
| ACTGGAATTTGAGGTTTGGA+AGG | 0.559680 | 7.4:+91086885 | MS.gene54522:CDS |
| TGATGCATTGTTGGAATGAT+GGG | 0.560209 | 7.4:+91086399 | MS.gene54522:CDS |
| AAAGGTTGTTGTAAAGAAGC+CGG | 0.561512 | 7.4:+91088350 | MS.gene54522:CDS |
| TTCCTTCCAGCCGAAGATGA+AGG | 0.563451 | 7.4:-91088054 | None:intergenic |
| AAAGATCCTGTCGACTGGAA+AGG | 0.566366 | 7.4:-91087424 | None:intergenic |
| TAAAAGTGGGGCAGCAGGCG+AGG | 0.568812 | 7.4:+91088155 | MS.gene54522:CDS |
| GAAATTGGTTGAAAGAGAAG+TGG | 0.570222 | 7.4:+91086679 | MS.gene54522:CDS |
| ATGACTTCAAGAATAAAAGT+GGG | 0.574745 | 7.4:+91088142 | MS.gene54522:CDS |
| TCAACTTTCATCGTCCCTGA+AGG | 0.578610 | 7.4:-91088300 | None:intergenic |
| GGTGGTAATAGTAGTACTGT+TGG | 0.578659 | 7.4:+91086431 | MS.gene54522:CDS |
| CATCTTCATCTGAGCTACCC+TGG | 0.581301 | 7.4:-91088569 | None:intergenic |
| ATGAAACGATGGAACTTAGA+GGG | 0.584574 | 7.4:+91087782 | MS.gene54522:CDS |
| CGAAGAATACATTCTCGCGT+TGG | 0.584770 | 7.4:-91087452 | None:intergenic |
| GAGTGAAGATAGGGAATTTG+GGG | 0.586049 | 7.4:+91086781 | MS.gene54522:CDS |
| GAAAGAGGCCGAAACTGCAA+AGG | 0.587425 | 7.4:-91086944 | None:intergenic |
| AACAAGCTTGAGAGCCTCCA+GGG | 0.587449 | 7.4:+91088552 | MS.gene54522:CDS |
| GTTAGAACAAGAAGAGCCAG+TGG | 0.587680 | 7.4:+91088273 | MS.gene54522:CDS |
| ATATGTCAATGATTCAGGAC+TGG | 0.587716 | 7.4:+91088602 | MS.gene54522:CDS |
| GATGATGCTGCTGTTGATGG+TGG | 0.590886 | 7.4:+91086836 | MS.gene54522:CDS |
| TTGGAATGATGGGTCTAATG+AGG | 0.593162 | 7.4:+91086409 | MS.gene54522:CDS |
| GAGAGGAAGGTATGCAACAA+AGG | 0.596628 | 7.4:+91087263 | MS.gene54522:CDS |
| TCCACCTGGGAACAAAGAGC+CGG | 0.598150 | 7.4:+91088179 | MS.gene54522:CDS |
| TCTAGCAAAAGCTCTATCAA+GGG | 0.599294 | 7.4:+91088242 | MS.gene54522:CDS |
| ACCAGAACCATCAAAGAGTG+TGG | 0.601044 | 7.4:+91088518 | MS.gene54522:CDS |
| AGAAAATGTCAGTTTCCAAG+TGG | 0.602938 | 7.4:+91087657 | MS.gene54522:CDS |
| CAGCAGGCGAGGATCCACCT+GGG | 0.605364 | 7.4:+91088166 | MS.gene54522:CDS |
| TCTGCTGCAGGAAGGTTTAG+GGG | 0.608479 | 7.4:+91087975 | MS.gene54522:CDS |
| GTGAAATTGAGAATTCATGT+GGG | 0.608726 | 7.4:+91086360 | MS.gene54522:CDS |
| TTTGGTTGGATCCGCAAATG+GGG | 0.609216 | 7.4:-91086047 | None:intergenic |
| TGCAATTGAATCAAACGAAG+AGG | 0.613592 | 7.4:-91087083 | None:intergenic |
| TGATTCAGGACTGGATTCTG+AGG | 0.613653 | 7.4:+91088611 | MS.gene54522:CDS |
| ACCGGCTCTTTGTTCCCAGG+TGG | 0.613998 | 7.4:-91088180 | None:intergenic |
| AAATTCCAGTCAATAGGCGA+AGG | 0.619279 | 7.4:-91086872 | None:intergenic |
| TGGAAGTCTATAGTGTCTGA+AGG | 0.619567 | 7.4:-91087487 | None:intergenic |
| AGACTTCCAAGAGGAAGTTG+TGG | 0.620957 | 7.4:+91087501 | MS.gene54522:CDS |
| GAAAGAGAAGTGGATGGTGT+TGG | 0.626607 | 7.4:+91086689 | MS.gene54522:CDS |
| TGGTAATGTTGAATCTGGTG+AGG | 0.629815 | 7.4:+91086616 | MS.gene54522:CDS |
| AATATGAATCTGCTGCAGGA+AGG | 0.629946 | 7.4:+91087967 | MS.gene54522:CDS |
| TTCAGGGAAGAAGGTATCCG+AGG | 0.630086 | 7.4:+91087300 | MS.gene54522:CDS |
| TTCAGGACTGGATTCTGAGG+TGG | 0.631137 | 7.4:+91088614 | MS.gene54522:CDS |
| TGTGAAATTGAGAATTCATG+TGG | 0.631268 | 7.4:+91086359 | MS.gene54522:CDS |
| GATATTGGCCTGAAATGCGA+AGG | 0.633118 | 7.4:-91087826 | None:intergenic |
| CTAGCAAAAGCTCTATCAAG+GGG | 0.633511 | 7.4:+91088243 | MS.gene54522:CDS |
| AAACGAAGAAGAATGCATAC+CGG | 0.634550 | 7.4:-91087026 | None:intergenic |
| AGAAATGAGACAACAAAAGG+AGG | 0.640172 | 7.4:+91087138 | MS.gene54522:CDS |
| TTCGAGACAACAGTATGAGA+CGG | 0.641271 | 7.4:+91087194 | MS.gene54522:CDS |
| TGAAGATATGAATTTCCAAG+AGG | 0.646848 | 7.4:+91087720 | MS.gene54522:CDS |
| GGGTAGCTCAGATGAAGATG+TGG | 0.647307 | 7.4:+91088572 | MS.gene54522:CDS |
| AATGATGGGTCTAATGAGGG+TGG | 0.648862 | 7.4:+91086413 | MS.gene54522:CDS |
| TCAGGGAAGAAGGTATCCGA+GGG | 0.649585 | 7.4:+91087301 | MS.gene54522:CDS |
| GTCTTCAGGAAATGAAACGA+TGG | 0.656997 | 7.4:+91087771 | MS.gene54522:CDS |
| CTTCGAACCGGCAATCCAAG+AGG | 0.659364 | 7.4:-91086653 | None:intergenic |
| AGAAAATATGAATTTCCAGG+AGG | 0.659594 | 7.4:+91087594 | MS.gene54522:CDS |
| GTATTATTATAGTGAGTCTG+TGG | 0.672416 | 7.4:+91086574 | MS.gene54522:CDS |
| TTGGTTGAAAGAGAAGTGGA+TGG | 0.691598 | 7.4:+91086683 | MS.gene54522:CDS |
| TGGAAATGATGGAACTAATG+TGG | 0.696129 | 7.4:+91086532 | MS.gene54522:CDS |
| TGACTTCAAGAATAAAAGTG+GGG | 0.709122 | 7.4:+91088143 | MS.gene54522:CDS |
| CTTCATCTGAGCTACCCTGG+AGG | 0.713788 | 7.4:-91088566 | None:intergenic |
| GAGACAACAGTATGAGACGG+AGG | 0.715023 | 7.4:+91087197 | MS.gene54522:CDS |
| AGACACTATAGACTTCCAAG+AGG | 0.725110 | 7.4:+91087492 | MS.gene54522:CDS |
| TAGCAAAAGCTCTATCAAGG+GGG | 0.752717 | 7.4:+91088244 | MS.gene54522:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATCACTATCAT+TGG | - | chr7.4:91086285-91086304 | None:intergenic | 15.0% |
| !! | AAATTCATATCTTCAGAAAA+AGG | - | chr7.4:91087715-91087734 | None:intergenic | 20.0% |
| !! | GGTAAATATTTCAATGAAAA+TGG | + | chr7.4:91086710-91086729 | MS.gene54522:CDS | 20.0% |
| ! | AAAGTTTATGGCAATGTTAA+TGG | + | chr7.4:91086920-91086939 | MS.gene54522:CDS | 25.0% |
| ! | AATCAGATCTTCTATTCAAA+GGG | + | chr7.4:91088418-91088437 | MS.gene54522:CDS | 25.0% |
| ! | AGGATTAAAAAAAGAGATTC+AGG | + | chr7.4:91087283-91087302 | MS.gene54522:CDS | 25.0% |
| ! | ATGACTTCAAGAATAAAAGT+GGG | + | chr7.4:91088142-91088161 | MS.gene54522:CDS | 25.0% |
| ! | GGATTAAAAAAAGAGATTCA+GGG | + | chr7.4:91087284-91087303 | MS.gene54522:CDS | 25.0% |
| ! | TCAAAAGGTCAAAAAATCTT+TGG | + | chr7.4:91088711-91088730 | MS.gene54522:CDS | 25.0% |
| ! | TTCAGAAAATATGAATTTCC+AGG | + | chr7.4:91087591-91087610 | MS.gene54522:CDS | 25.0% |
| !! | AAAATGATATTTTCATGAGC+AGG | - | chr7.4:91087241-91087260 | None:intergenic | 25.0% |
| !! | ATCAGAATTCGACAATTTTT+CGG | - | chr7.4:91086480-91086499 | None:intergenic | 25.0% |
| !! | GCTCATGAAAATATCATTTT+CGG | + | chr7.4:91087241-91087260 | MS.gene54522:CDS | 25.0% |
| !! | TCGAATTCTGATGATAATTT+TGG | + | chr7.4:91086488-91086507 | MS.gene54522:CDS | 25.0% |
| !! | TCTTTAAGAAACAGAAGAAT+AGG | + | chr7.4:91087328-91087347 | MS.gene54522:CDS | 25.0% |
| !! | TTCTTCTGTTTCTTAAAGAA+CGG | - | chr7.4:91087327-91087346 | None:intergenic | 25.0% |
| !!! | GATAATTTTGGTTATTCAGT+TGG | + | chr7.4:91086500-91086519 | MS.gene54522:CDS | 25.0% |
| !!! | TTACCTTTTTTGATTGGTTT+TGG | - | chr7.4:91086068-91086087 | None:intergenic | 25.0% |
| AACAGAAGAATAGGTACTAA+AGG | + | chr7.4:91087337-91087356 | MS.gene54522:CDS | 30.0% | |
| AACTTGAATCACGTATTTCA+CGG | + | chr7.4:91087863-91087882 | MS.gene54522:CDS | 30.0% | |
| ACAGAAGAATAGGTACTAAA+GGG | + | chr7.4:91087338-91087357 | MS.gene54522:CDS | 30.0% | |
| AGAAAATATGAATTTCCAGG+AGG | + | chr7.4:91087594-91087613 | MS.gene54522:CDS | 30.0% | |
| AGAATAAGATGATGCATTGT+TGG | + | chr7.4:91086390-91086409 | MS.gene54522:CDS | 30.0% | |
| ATGGAAAGGGAAAAAGTTTA+TGG | + | chr7.4:91086908-91086927 | MS.gene54522:CDS | 30.0% | |
| CAAATTAGGCTTCAGAAAAT+TGG | + | chr7.4:91088675-91088694 | MS.gene54522:CDS | 30.0% | |
| CAACCAAAACCAATCAAAAA+AGG | + | chr7.4:91086062-91086081 | MS.gene54522:CDS | 30.0% | |
| GAATCAGATCTTCTATTCAA+AGG | + | chr7.4:91088417-91088436 | MS.gene54522:CDS | 30.0% | |
| GATGACTTCAAGAATAAAAG+TGG | + | chr7.4:91088141-91088160 | MS.gene54522:CDS | 30.0% | |
| GATTCAACATTACCAAAGTA+AGG | - | chr7.4:91086611-91086630 | None:intergenic | 30.0% | |
| GGATCAATTGAAAGATCAAA+AGG | + | chr7.4:91088696-91088715 | MS.gene54522:CDS | 30.0% | |
| GTATTATTATAGTGAGTCTG+TGG | + | chr7.4:91086574-91086593 | MS.gene54522:CDS | 30.0% | |
| GTGAAATTGAGAATTCATGT+GGG | + | chr7.4:91086360-91086379 | MS.gene54522:CDS | 30.0% | |
| TCTGAATATGTCAATGATTC+AGG | + | chr7.4:91088597-91088616 | MS.gene54522:CDS | 30.0% | |
| TGAAGATATGAATTTCCAAG+AGG | + | chr7.4:91087720-91087739 | MS.gene54522:CDS | 30.0% | |
| TGACTTCAAGAATAAAAGTG+GGG | + | chr7.4:91088143-91088162 | MS.gene54522:CDS | 30.0% | |
| TGAGTTTCATCAACAGATAT+TGG | - | chr7.4:91087844-91087863 | None:intergenic | 30.0% | |
| TGCATCGGATAATATCAATA+CGG | + | chr7.4:91087102-91087121 | MS.gene54522:CDS | 30.0% | |
| TGTGAAATTGAGAATTCATG+TGG | + | chr7.4:91086359-91086378 | MS.gene54522:CDS | 30.0% | |
| TTCAGAAAACATGAATTTCC+AGG | + | chr7.4:91087552-91087571 | MS.gene54522:CDS | 30.0% | |
| TTCGTTTGATTCAATTGCAT+CGG | + | chr7.4:91087087-91087106 | MS.gene54522:CDS | 30.0% | |
| TTCTGATGAAACAGAATCTA+CGG | - | chr7.4:91087947-91087966 | None:intergenic | 30.0% | |
| ! | AATTGTTTCTCCAAATTCGA+AGG | - | chr7.4:91086815-91086834 | None:intergenic | 30.0% |
| ! | CTATTTTCCAAATCATGATG+AGG | + | chr7.4:91088464-91088483 | MS.gene54522:CDS | 30.0% |
| ! | CTTTACAACAACCTTTTCAT+CGG | - | chr7.4:91088346-91088365 | None:intergenic | 30.0% |
| ! | TGAAAATATCATTTTCGGAG+AGG | + | chr7.4:91087246-91087265 | MS.gene54522:CDS | 30.0% |
| ! | TTTCCTGCTTCAACTATTTT+TGG | + | chr7.4:91086329-91086348 | MS.gene54522:CDS | 30.0% |
| !! | TACTTTGGTAATGTTGAATC+TGG | + | chr7.4:91086611-91086630 | MS.gene54522:CDS | 30.0% |
| !!! | ATGTTTTCTGAAGTATGCAA+AGG | - | chr7.4:91087544-91087563 | None:intergenic | 30.0% |
| !!! | CAAGAGTTACCTTTTTTGAT+TGG | - | chr7.4:91086074-91086093 | None:intergenic | 30.0% |
| !!! | CTTTTTTGATTGGTTTTGGT+TGG | - | chr7.4:91086064-91086083 | None:intergenic | 30.0% |
| !!! | TGTTTTCTGAAGTATGCAAA+GGG | - | chr7.4:91087543-91087562 | None:intergenic | 30.0% |
| AAAAAGAGATTCAGGGAAGA+AGG | + | chr7.4:91087291-91087310 | MS.gene54522:CDS | 35.0% | |
| AAAAATTCAGGAGCTTGTGA+AGG | - | chr7.4:91086158-91086177 | None:intergenic | 35.0% | |
| AAACGAAGAAGAATGCATAC+CGG | - | chr7.4:91087029-91087048 | None:intergenic | 35.0% | |
| AAAGGTTGTTGTAAAGAAGC+CGG | + | chr7.4:91088350-91088369 | MS.gene54522:CDS | 35.0% | |
| AAATCATGATGAGGTTTCGT+TGG | + | chr7.4:91088473-91088492 | MS.gene54522:CDS | 35.0% | |
| AAATGGCTGCAATGAAGTTT+CGG | - | chr7.4:91088082-91088101 | None:intergenic | 35.0% | |
| AACCTCAAATTCCAGTCAAT+AGG | - | chr7.4:91086881-91086900 | None:intergenic | 35.0% | |
| AACGAAACCTCATCATGATT+TGG | - | chr7.4:91088474-91088493 | None:intergenic | 35.0% | |
| AATGAAACGATGGAACTTAG+AGG | + | chr7.4:91087781-91087800 | MS.gene54522:CDS | 35.0% | |
| ACCAATTTCAAACTTCGAAC+CGG | - | chr7.4:91086668-91086687 | None:intergenic | 35.0% | |
| AGAAAATATGAATCTGCTGC+AGG | + | chr7.4:91087963-91087982 | MS.gene54522:CDS | 35.0% | |
| AGAAAATGTCAGTTTCCAAG+TGG | + | chr7.4:91087657-91087676 | MS.gene54522:CDS | 35.0% | |
| AGAAATGAGACAACAAAAGG+AGG | + | chr7.4:91087138-91087157 | MS.gene54522:CDS | 35.0% | |
| AGATATGAATTTCCAAGAGG+TGG | + | chr7.4:91087723-91087742 | MS.gene54522:CDS | 35.0% | |
| AGTTTCCAAGTGGAAGATTT+GGG | + | chr7.4:91087667-91087686 | MS.gene54522:CDS | 35.0% | |
| ATATGTCAATGATTCAGGAC+TGG | + | chr7.4:91088602-91088621 | MS.gene54522:CDS | 35.0% | |
| ATGAAACGATGGAACTTAGA+GGG | + | chr7.4:91087782-91087801 | MS.gene54522:CDS | 35.0% | |
| ATGATGCATTGTTGGAATGA+TGG | + | chr7.4:91086398-91086417 | MS.gene54522:CDS | 35.0% | |
| CAACAATGCCAATGAAAAGA+AGG | - | chr7.4:91086220-91086239 | None:intergenic | 35.0% | |
| CGAAGAAATGAGACAACAAA+AGG | + | chr7.4:91087135-91087154 | MS.gene54522:CDS | 35.0% | |
| GAAATTGGTTGAAAGAGAAG+TGG | + | chr7.4:91086679-91086698 | MS.gene54522:CDS | 35.0% | |
| GAACTAATGTGGTTCAATCT+TGG | + | chr7.4:91086543-91086562 | MS.gene54522:CDS | 35.0% | |
| GCATCGGATAATATCAATAC+GGG | + | chr7.4:91087103-91087122 | MS.gene54522:CDS | 35.0% | |
| GTTGCTGTATCAACATTATC+CGG | - | chr7.4:91088372-91088391 | None:intergenic | 35.0% | |
| TCACAGTTCTCTTCTAATAC+CGG | + | chr7.4:91087007-91087026 | MS.gene54522:CDS | 35.0% | |
| TCACCAAAAATAGTTGAAGC+AGG | - | chr7.4:91086335-91086354 | None:intergenic | 35.0% | |
| TCTAGCAAAAGCTCTATCAA+GGG | + | chr7.4:91088242-91088261 | MS.gene54522:CDS | 35.0% | |
| TGAGTGAAGATAGGGAATTT+GGG | + | chr7.4:91086780-91086799 | MS.gene54522:CDS | 35.0% | |
| TGATGCATTGTTGGAATGAT+GGG | + | chr7.4:91086399-91086418 | MS.gene54522:CDS | 35.0% | |
| TGCAATTGAATCAAACGAAG+AGG | - | chr7.4:91087086-91087105 | None:intergenic | 35.0% | |
| TTAATGGTCCTTTGCAGTTT+CGG | + | chr7.4:91086936-91086955 | MS.gene54522:CDS | 35.0% | |
| ! | AATATCATTTTCGGAGAGGA+AGG | + | chr7.4:91087250-91087269 | MS.gene54522:CDS | 35.0% |
| ! | AATGGAAGTGATTCGAGTTT+AGG | + | chr7.4:91086728-91086747 | MS.gene54522:CDS | 35.0% |
| ! | ACATTCTTCTTTTCCAAAGC+AGG | - | chr7.4:91087175-91087194 | None:intergenic | 35.0% |
| ! | ATTGACTGGAATTTGAGGTT+TGG | + | chr7.4:91086881-91086900 | MS.gene54522:CDS | 35.0% |
| ! | ATTGGCATTGTTGTTGCTTA+TGG | + | chr7.4:91086227-91086246 | MS.gene54522:CDS | 35.0% |
| ! | CTTCTTCACCTTCTTTTCAT+TGG | + | chr7.4:91086209-91086228 | MS.gene54522:CDS | 35.0% |
| ! | GTTGATGAGACTAAGTTTGA+AGG | + | chr7.4:91086968-91086987 | MS.gene54522:CDS | 35.0% |
| ! | TCTTTGGTGACAACAATGTT+AGG | + | chr7.4:91088727-91088746 | MS.gene54522:CDS | 35.0% |
| ! | TGGAAATGATGGAACTAATG+TGG | + | chr7.4:91086532-91086551 | MS.gene54522:CDS | 35.0% |
| ! | TTCAAGTTCACCTTCATCTT+CGG | + | chr7.4:91088044-91088063 | MS.gene54522:CDS | 35.0% |
| !! | ATGGGTTGGTTCAAAAATTC+AGG | - | chr7.4:91086170-91086189 | None:intergenic | 35.0% |
| !!! | ATTTTCTGAAGCATGCACAT+AGG | - | chr7.4:91087644-91087663 | None:intergenic | 35.0% |
| !!! | GGTTATTCAGTTGGTTTTGA+TGG | + | chr7.4:91086509-91086528 | MS.gene54522:CDS | 35.0% |
| !!! | GTTTTCTGAAGTATGCAAAG+GGG | - | chr7.4:91087542-91087561 | None:intergenic | 35.0% |
| !!! | TATTCAGTTGGTTTTGATGG+TGG | + | chr7.4:91086512-91086531 | MS.gene54522:CDS | 35.0% |
| AAATTCCAGTCAATAGGCGA+AGG | - | chr7.4:91086875-91086894 | None:intergenic | 40.0% | |
| AACCCATACTCACCAAGTTA+TGG | + | chr7.4:91086183-91086202 | MS.gene54522:CDS | 40.0% | |
| AAGATTTCTCAGGTGTCTTC+AGG | + | chr7.4:91087757-91087776 | MS.gene54522:CDS | 40.0% | |
| AAGCTAGTGAATTTATCGCC+AGG | + | chr7.4:91088643-91088662 | MS.gene54522:CDS | 40.0% | |
| AAGTATGCATATCTTGCTCC+TGG | - | chr7.4:91087573-91087592 | None:intergenic | 40.0% | |
| AAGTCTTCCACACTCTTTGA+TGG | - | chr7.4:91088528-91088547 | None:intergenic | 40.0% | |
| AATATGAATCTGCTGCAGGA+AGG | + | chr7.4:91087967-91087986 | MS.gene54522:CDS | 40.0% | |
| ACCCATACTCACCAAGTTAT+GGG | + | chr7.4:91086184-91086203 | MS.gene54522:CDS | 40.0% | |
| AGACACTATAGACTTCCAAG+AGG | + | chr7.4:91087492-91087511 | MS.gene54522:CDS | 40.0% | |
| AGATAGGGAATTTGGGGATA+TGG | + | chr7.4:91086787-91086806 | MS.gene54522:CDS | 40.0% | |
| CAATCACAAAACCCCATTTG+CGG | + | chr7.4:91086036-91086055 | MS.gene54522:CDS | 40.0% | |
| CAGTTTCCAAGTGGAAGATT+TGG | + | chr7.4:91087666-91087685 | MS.gene54522:CDS | 40.0% | |
| CCAGGTTCAAAGCTCAAATT+AGG | + | chr7.4:91088661-91088680 | MS.gene54522:CDS | 40.0% | |
| CTAGCAAAAGCTCTATCAAG+GGG | + | chr7.4:91088243-91088262 | MS.gene54522:CDS | 40.0% | |
| GAATTTCCAGGAGGAAGATA+TGG | + | chr7.4:91087603-91087622 | MS.gene54522:CDS | 40.0% | |
| GAGACTAAGTTTGAAGGACT+TGG | + | chr7.4:91086974-91086993 | MS.gene54522:CDS | 40.0% | |
| GAGTGAAGATAGGGAATTTG+GGG | + | chr7.4:91086781-91086800 | MS.gene54522:CDS | 40.0% | |
| GGATATGGATCCTTCGAATT+TGG | + | chr7.4:91086802-91086821 | MS.gene54522:CDS | 40.0% | |
| GGTGGTAATAGTAGTACTGT+TGG | + | chr7.4:91086431-91086450 | MS.gene54522:CDS | 40.0% | |
| GTCTAGCAAAAGCTCTATCA+AGG | + | chr7.4:91088241-91088260 | MS.gene54522:CDS | 40.0% | |
| GTCTTCAGGAAATGAAACGA+TGG | + | chr7.4:91087771-91087790 | MS.gene54522:CDS | 40.0% | |
| GTGAGTGAAGATAGGGAATT+TGG | + | chr7.4:91086779-91086798 | MS.gene54522:CDS | 40.0% | |
| GTTGGATGTGAGTGAAGATA+GGG | + | chr7.4:91086772-91086791 | MS.gene54522:CDS | 40.0% | |
| GTTGTTGCTCAACCTTACTT+TGG | + | chr7.4:91086596-91086615 | MS.gene54522:CDS | 40.0% | |
| GTTGTTGGTCATAAACCTCT+TGG | + | chr7.4:91086638-91086657 | MS.gene54522:CDS | 40.0% | |
| TAGCAAAAGCTCTATCAAGG+GGG | + | chr7.4:91088244-91088263 | MS.gene54522:CDS | 40.0% | |
| TCATAAACCTCTTGGATTGC+CGG | + | chr7.4:91086646-91086665 | MS.gene54522:CDS | 40.0% | |
| TCGTGTAGCAAGCTAACAAA+TGG | - | chr7.4:91088099-91088118 | None:intergenic | 40.0% | |
| TGAAGAAGACGAAGAAGAAG+AGG | - | chr7.4:91088028-91088047 | None:intergenic | 40.0% | |
| TGGAAGTCTATAGTGTCTGA+AGG | - | chr7.4:91087490-91087509 | None:intergenic | 40.0% | |
| TTAGTCTCATCAACCGAAAG+AGG | - | chr7.4:91086962-91086981 | None:intergenic | 40.0% | |
| TTAGTTCCACAACTTCCTCT+TGG | - | chr7.4:91087510-91087529 | None:intergenic | 40.0% | |
| TTCGAGACAACAGTATGAGA+CGG | + | chr7.4:91087194-91087213 | MS.gene54522:CDS | 40.0% | |
| TTGGTTGAAAGAGAAGTGGA+TGG | + | chr7.4:91086683-91086702 | MS.gene54522:CDS | 40.0% | |
| TTTCTCATCCTTCGCATTTC+AGG | + | chr7.4:91087818-91087837 | MS.gene54522:CDS | 40.0% | |
| TTTGTCCCAAATCTTCCACT+TGG | - | chr7.4:91087675-91087694 | None:intergenic | 40.0% | |
| ! | ACTGGAATTTGAGGTTTGGA+AGG | + | chr7.4:91086885-91086904 | MS.gene54522:CDS | 40.0% |
| ! | AGAGCTTTTGCTAGACTTGT+TGG | - | chr7.4:91088237-91088256 | None:intergenic | 40.0% |
| ! | ATAACTTGGTGAGTATGGGT+TGG | - | chr7.4:91086184-91086203 | None:intergenic | 40.0% |
| ! | ATCAAAGAGTGTGGAAGACT+TGG | + | chr7.4:91088527-91088546 | MS.gene54522:CDS | 40.0% |
| ! | GAATTTCCAAGAGGTGGATT+TGG | + | chr7.4:91087729-91087748 | MS.gene54522:CDS | 40.0% |
| ! | GAATTTGAGGTTTGGAAGGA+TGG | + | chr7.4:91086889-91086908 | MS.gene54522:CDS | 40.0% |
| ! | TCCCATAACTTGGTGAGTAT+GGG | - | chr7.4:91086188-91086207 | None:intergenic | 40.0% |
| ! | TGGTAATGTTGAATCTGGTG+AGG | + | chr7.4:91086616-91086635 | MS.gene54522:CDS | 40.0% |
| !! | CCTAATTTGAGCTTTGAACC+TGG | - | chr7.4:91088664-91088683 | None:intergenic | 40.0% |
| !! | GCAAATGGGGTTTTGTGATT+GGG | - | chr7.4:91086037-91086056 | None:intergenic | 40.0% |
| !! | TGGAATGATGGGTCTAATGA+GGG | + | chr7.4:91086410-91086429 | MS.gene54522:CDS | 40.0% |
| !! | TTGGAATGATGGGTCTAATG+AGG | + | chr7.4:91086409-91086428 | MS.gene54522:CDS | 40.0% |
| !! | TTTGATGATGCTGCTGTTGA+TGG | + | chr7.4:91086833-91086852 | MS.gene54522:CDS | 40.0% |
| !! | TTTGGTGACGAAGATTTCTC+AGG | + | chr7.4:91087747-91087766 | MS.gene54522:CDS | 40.0% |
| !! | TTTTGGTTGGATCCGCAAAT+GGG | - | chr7.4:91086051-91086070 | None:intergenic | 40.0% |
| !!! | GGTTTTGATGGTGGAAATGA+TGG | + | chr7.4:91086521-91086540 | MS.gene54522:CDS | 40.0% |
| AAGAATAAAAGTGGGGCAGC+AGG | + | chr7.4:91088150-91088169 | MS.gene54522:CDS | 45.0% | |
| AATCTGCTGCAGGAAGGTTT+AGG | + | chr7.4:91087973-91087992 | MS.gene54522:CDS | 45.0% | |
| ACCAGAACCATCAAAGAGTG+TGG | + | chr7.4:91088518-91088537 | MS.gene54522:CDS | 45.0% | |
| AGACTTCCAAGAGGAAGTTG+TGG | + | chr7.4:91087501-91087520 | MS.gene54522:CDS | 45.0% | |
| ATCTGCTGCAGGAAGGTTTA+GGG | + | chr7.4:91087974-91087993 | MS.gene54522:CDS | 45.0% | |
| CAGAAAAAGATCCTGTCGAC+TGG | - | chr7.4:91087432-91087451 | None:intergenic | 45.0% | |
| CGAAGAATACATTCTCGCGT+TGG | - | chr7.4:91087455-91087474 | None:intergenic | 45.0% | |
| CGCGAGAATGTATTCTTCGA+TGG | + | chr7.4:91087456-91087475 | MS.gene54522:CDS | 45.0% | |
| GAAAGAGAAGTGGATGGTGT+TGG | + | chr7.4:91086689-91086708 | MS.gene54522:CDS | 45.0% | |
| GAATGCAAACCATGCATCAC+CGG | - | chr7.4:91088201-91088220 | None:intergenic | 45.0% | |
| GAGGTTTGGAAGGATGGAAA+GGG | + | chr7.4:91086895-91086914 | MS.gene54522:CDS | 45.0% | |
| GGAGCTTGTGAAGGAAAAAG+TGG | - | chr7.4:91086149-91086168 | None:intergenic | 45.0% | |
| GGTTGGATGTGAGTGAAGAT+AGG | + | chr7.4:91086771-91086790 | MS.gene54522:CDS | 45.0% | |
| GTGAAGAAGCTCCCATAACT+TGG | - | chr7.4:91086198-91086217 | None:intergenic | 45.0% | |
| GTTAGAACAAGAAGAGCCAG+TGG | + | chr7.4:91088273-91088292 | MS.gene54522:CDS | 45.0% | |
| GTTGAATCTGGTGAGGTTGT+TGG | + | chr7.4:91086623-91086642 | MS.gene54522:CDS | 45.0% | |
| GTTTCTTAAAGAACGGCCCT+CGG | - | chr7.4:91087320-91087339 | None:intergenic | 45.0% | |
| TAGCAAGCAAGCCGATGAAA+AGG | + | chr7.4:91088332-91088351 | MS.gene54522:CDS | 45.0% | |
| TCAACTTTCATCGTCCCTGA+AGG | - | chr7.4:91088303-91088322 | None:intergenic | 45.0% | |
| TGAGGTTTGGAAGGATGGAA+AGG | + | chr7.4:91086894-91086913 | MS.gene54522:CDS | 45.0% | |
| TGATTCAGGACTGGATTCTG+AGG | + | chr7.4:91088611-91088630 | MS.gene54522:CDS | 45.0% | |
| TTTGCAGTTTCGGCCTCTTT+CGG | + | chr7.4:91086946-91086965 | MS.gene54522:CDS | 45.0% | |
| TTTGGTTGGATCCGCAAATG+GGG | - | chr7.4:91086050-91086069 | None:intergenic | 45.0% | |
| ! | AAAGATCCTGTCGACTGGAA+AGG | - | chr7.4:91087427-91087446 | None:intergenic | 45.0% |
| ! | CGCCTATTGACTGGAATTTG+AGG | + | chr7.4:91086876-91086895 | MS.gene54522:CDS | 45.0% |
| ! | CTCCCATAACTTGGTGAGTA+TGG | - | chr7.4:91086189-91086208 | None:intergenic | 45.0% |
| ! | GAGAGGAAGGTATGCAACAA+AGG | + | chr7.4:91087263-91087282 | MS.gene54522:CDS | 45.0% |
| ! | GATATTGGCCTGAAATGCGA+AGG | - | chr7.4:91087829-91087848 | None:intergenic | 45.0% |
| ! | GGTGATGCATGGTTTGCATT+CGG | + | chr7.4:91088200-91088219 | MS.gene54522:CDS | 45.0% |
| ! | GTGATTCGAGTTTAGGTTCG+AGG | + | chr7.4:91086735-91086754 | MS.gene54522:CDS | 45.0% |
| ! | TCCACACTCTTTGATGGTTC+TGG | - | chr7.4:91088522-91088541 | None:intergenic | 45.0% |
| !! | AATGATGGGTCTAATGAGGG+TGG | + | chr7.4:91086413-91086432 | MS.gene54522:CDS | 45.0% |
| !! | CGCAAATGGGGTTTTGTGAT+TGG | - | chr7.4:91086038-91086057 | None:intergenic | 45.0% |
| !! | GCCGGTTCGAAGTTTGAAAT+TGG | + | chr7.4:91086664-91086683 | MS.gene54522:CDS | 45.0% |
| !! | TGGGGTTTTGTGATTGGGAT+TGG | - | chr7.4:91086032-91086051 | None:intergenic | 45.0% |
| !!! | GTTTTGGTTGGATCCGCAAA+TGG | - | chr7.4:91086052-91086071 | None:intergenic | 45.0% |
| AACAAAGAGCCGGTGATGCA+TGG | + | chr7.4:91088189-91088208 | MS.gene54522:CDS | 50.0% | |
| AACAAGCTTGAGAGCCTCCA+GGG | + | chr7.4:91088552-91088571 | MS.gene54522:CDS | 50.0% | |
| AGTTCACCTTCATCTTCGGC+TGG | + | chr7.4:91088048-91088067 | MS.gene54522:CDS | 50.0% | |
| CATCTTCATCTGAGCTACCC+TGG | - | chr7.4:91088572-91088591 | None:intergenic | 50.0% | |
| CTTCTCCTTCGCCTATTGAC+TGG | + | chr7.4:91086867-91086886 | MS.gene54522:CDS | 50.0% | |
| GAAAGAGGCCGAAACTGCAA+AGG | - | chr7.4:91086947-91086966 | None:intergenic | 50.0% | |
| GAGACAACAGTATGAGACGG+AGG | + | chr7.4:91087197-91087216 | MS.gene54522:CDS | 50.0% | |
| GGGGAAAAGAAGAGCTTGCA+TGG | + | chr7.4:91087994-91088013 | MS.gene54522:CDS | 50.0% | |
| GGGTAGCTCAGATGAAGATG+TGG | + | chr7.4:91088572-91088591 | MS.gene54522:CDS | 50.0% | |
| GTTTGCATTCGGACTCAGAC+AGG | + | chr7.4:91088211-91088230 | MS.gene54522:CDS | 50.0% | |
| TAACAAGCTTGAGAGCCTCC+AGG | + | chr7.4:91088551-91088570 | MS.gene54522:CDS | 50.0% | |
| TCACGGTCTTTGCAGTCTGT+GGG | + | chr7.4:91087880-91087899 | MS.gene54522:CDS | 50.0% | |
| TCGTCACCAAATCCACCTCT+TGG | - | chr7.4:91087738-91087757 | None:intergenic | 50.0% | |
| TCTGCTGCAGGAAGGTTTAG+GGG | + | chr7.4:91087975-91087994 | MS.gene54522:CDS | 50.0% | |
| TGTGCTCCATATCTTCCTCC+TGG | - | chr7.4:91087612-91087631 | None:intergenic | 50.0% | |
| TTCACGGTCTTTGCAGTCTG+TGG | + | chr7.4:91087879-91087898 | MS.gene54522:CDS | 50.0% | |
| TTCCTTCCAGCCGAAGATGA+AGG | - | chr7.4:91088057-91088076 | None:intergenic | 50.0% | |
| ! | CTTTTCCAAAGCAGGCGCAT+AGG | - | chr7.4:91087167-91087186 | None:intergenic | 50.0% |
| ! | GAGGCGTTCTTCTAAGAGGT+TGG | + | chr7.4:91086754-91086773 | MS.gene54522:CDS | 50.0% |
| ! | GATGATGCTGCTGTTGATGG+TGG | + | chr7.4:91086836-91086855 | MS.gene54522:CDS | 50.0% |
| ! | GTTCGAGGCGTTCTTCTAAG+AGG | + | chr7.4:91086750-91086769 | MS.gene54522:CDS | 50.0% |
| ! | TTCAGGACTGGATTCTGAGG+TGG | + | chr7.4:91088614-91088633 | MS.gene54522:CDS | 50.0% |
| !! | TCAGGGAAGAAGGTATCCGA+GGG | + | chr7.4:91087301-91087320 | MS.gene54522:CDS | 50.0% |
| !! | TTCAGGGAAGAAGGTATCCG+AGG | + | chr7.4:91087300-91087319 | MS.gene54522:CDS | 50.0% |
| CACCTTCATCTTCGGCTGGA+AGG | + | chr7.4:91088052-91088071 | MS.gene54522:CDS | 55.0% | |
| CTTCATCTGAGCTACCCTGG+AGG | - | chr7.4:91088569-91088588 | None:intergenic | 55.0% | |
| CTTCGAACCGGCAATCCAAG+AGG | - | chr7.4:91086656-91086675 | None:intergenic | 55.0% | |
| GGATTCCTATGCGCCTGCTT+TGG | + | chr7.4:91087159-91087178 | MS.gene54522:CDS | 55.0% | |
| TCACAGCCTTTCCAGTCGAC+AGG | + | chr7.4:91087418-91087437 | MS.gene54522:CDS | 55.0% | |
| TCCACCTGGGAACAAAGAGC+CGG | + | chr7.4:91088179-91088198 | MS.gene54522:CDS | 55.0% | |
| !! | AGAGCCAGTGGATTGCCTTC+AGG | + | chr7.4:91088285-91088304 | MS.gene54522:CDS | 55.0% |
| !! | ATCACCGGCTCTTTGTTCCC+AGG | - | chr7.4:91088186-91088205 | None:intergenic | 55.0% |
| !! | GAGCCAGTGGATTGCCTTCA+GGG | + | chr7.4:91088286-91088305 | MS.gene54522:CDS | 55.0% |
| !! | GATGCTGCTGTTGATGGTGG+TGG | + | chr7.4:91086839-91086858 | MS.gene54522:CDS | 55.0% |
| CGTCCCTGAAGGCAATCCAC+TGG | - | chr7.4:91088292-91088311 | None:intergenic | 60.0% | |
| TAAAAGTGGGGCAGCAGGCG+AGG | + | chr7.4:91088155-91088174 | MS.gene54522:CDS | 60.0% | |
| ! | ACCGGCTCTTTGTTCCCAGG+TGG | - | chr7.4:91088183-91088202 | None:intergenic | 60.0% |
| CAGCAGGCGAGGATCCACCT+GGG | + | chr7.4:91088166-91088185 | MS.gene54522:CDS | 65.0% | |
| GCAGCAGGCGAGGATCCACC+TGG | + | chr7.4:91088165-91088184 | MS.gene54522:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 91086020 | 91088752 | 91086020 | ID=MS.gene54522 |
| chr7.4 | mRNA | 91086020 | 91088752 | 91086020 | ID=MS.gene54522.t1;Parent=MS.gene54522 |
| chr7.4 | exon | 91086020 | 91088752 | 91086020 | ID=MS.gene54522.t1.exon1;Parent=MS.gene54522.t1 |
| chr7.4 | CDS | 91086020 | 91088752 | 91086020 | ID=cds.MS.gene54522.t1;Parent=MS.gene54522.t1 |
| Gene Sequence |
| Protein sequence |
