Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54678.t1 | XP_013450865.1 | 99.8 | 463 | 1 | 0 | 1 | 463 | 204 | 666 | 7.50E-265 | 922.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54678.t1 | Q9LJP4 | 82.3 | 481 | 60 | 3 | 1 | 463 | 200 | 673 | 2.6e-229 | 795.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54678.t1 | A0A072UGL0 | 99.8 | 463 | 1 | 0 | 1 | 463 | 204 | 666 | 5.4e-265 | 922.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055531 | MS.gene54678 | 0.813583 | 2.38E-51 | -1.69E-46 |
| MS.gene055622 | MS.gene54678 | 0.820569 | 6.40E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54678.t1 | MTR_6g007807 | 99.784 | 463 | 1 | 0 | 1 | 463 | 204 | 666 | 0.0 | 957 |
| MS.gene54678.t1 | MTR_3g109040 | 80.472 | 466 | 87 | 3 | 1 | 463 | 212 | 676 | 0.0 | 777 |
| MS.gene54678.t1 | MTR_3g109040 | 80.472 | 466 | 87 | 3 | 1 | 463 | 223 | 687 | 0.0 | 777 |
| MS.gene54678.t1 | MTR_4g006010 | 81.250 | 464 | 84 | 2 | 1 | 463 | 238 | 699 | 0.0 | 776 |
| MS.gene54678.t1 | MTR_8g012320 | 76.674 | 463 | 107 | 1 | 1 | 463 | 241 | 702 | 0.0 | 724 |
| MS.gene54678.t1 | MTR_3g103500 | 75.532 | 470 | 99 | 3 | 1 | 463 | 238 | 698 | 0.0 | 713 |
| MS.gene54678.t1 | MTR_3g103500 | 78.327 | 263 | 57 | 0 | 1 | 263 | 238 | 500 | 2.04e-155 | 451 |
| MS.gene54678.t1 | MTR_1g061270 | 45.870 | 460 | 217 | 4 | 1 | 459 | 88 | 516 | 2.10e-147 | 431 |
| MS.gene54678.t1 | MTR_1g061510 | 45.572 | 463 | 221 | 3 | 1 | 462 | 88 | 520 | 6.45e-145 | 424 |
| MS.gene54678.t1 | MTR_7g103590 | 45.572 | 463 | 221 | 3 | 1 | 462 | 97 | 529 | 3.17e-143 | 421 |
| MS.gene54678.t1 | MTR_1g492700 | 45.217 | 460 | 221 | 4 | 1 | 459 | 95 | 524 | 7.13e-141 | 414 |
| MS.gene54678.t1 | MTR_1g061280 | 44.181 | 464 | 228 | 5 | 1 | 463 | 88 | 521 | 7.65e-141 | 414 |
| MS.gene54678.t1 | MTR_4g055520 | 44.563 | 469 | 230 | 7 | 1 | 462 | 97 | 542 | 2.33e-140 | 414 |
| MS.gene54678.t1 | MTR_1g061340 | 44.035 | 461 | 225 | 4 | 1 | 459 | 88 | 517 | 5.00e-140 | 412 |
| MS.gene54678.t1 | MTR_4g055520 | 50.689 | 363 | 178 | 1 | 1 | 362 | 97 | 459 | 5.63e-137 | 403 |
| MS.gene54678.t1 | MTR_7g101950 | 43.750 | 464 | 230 | 5 | 1 | 462 | 93 | 527 | 1.04e-134 | 399 |
| MS.gene54678.t1 | MTR_4g055520 | 43.326 | 457 | 229 | 7 | 13 | 462 | 29 | 462 | 1.03e-133 | 394 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54678.t1 | AT3G28180 | 82.328 | 481 | 60 | 3 | 1 | 463 | 200 | 673 | 0.0 | 805 |
| MS.gene54678.t1 | AT2G24630 | 80.901 | 466 | 83 | 3 | 1 | 463 | 228 | 690 | 0.0 | 766 |
| MS.gene54678.t1 | AT2G24630 | 80.901 | 466 | 83 | 3 | 1 | 463 | 228 | 690 | 0.0 | 766 |
| MS.gene54678.t1 | AT4G31590 | 79.828 | 466 | 90 | 2 | 1 | 463 | 228 | 692 | 0.0 | 756 |
| MS.gene54678.t1 | AT3G07330 | 73.650 | 463 | 120 | 1 | 1 | 463 | 222 | 682 | 0.0 | 732 |
| MS.gene54678.t1 | AT3G07330 | 73.650 | 463 | 120 | 1 | 1 | 463 | 222 | 682 | 0.0 | 732 |
| MS.gene54678.t1 | AT4G07960 | 75.325 | 462 | 109 | 1 | 1 | 462 | 242 | 698 | 0.0 | 698 |
| MS.gene54678.t1 | AT4G07960 | 75.325 | 462 | 109 | 1 | 1 | 462 | 242 | 698 | 0.0 | 698 |
| MS.gene54678.t1 | AT5G03760 | 45.591 | 465 | 218 | 6 | 1 | 462 | 98 | 530 | 4.79e-143 | 420 |
| MS.gene54678.t1 | AT5G22740 | 44.276 | 463 | 229 | 3 | 1 | 462 | 98 | 532 | 4.94e-142 | 417 |
| MS.gene54678.t1 | AT1G23480 | 45.259 | 464 | 221 | 5 | 1 | 462 | 49 | 481 | 3.19e-137 | 404 |
| MS.gene54678.t1 | AT1G23480 | 45.259 | 464 | 221 | 5 | 1 | 462 | 121 | 553 | 4.46e-136 | 403 |
| MS.gene54678.t1 | AT1G23480 | 45.259 | 464 | 221 | 5 | 1 | 462 | 121 | 553 | 4.46e-136 | 403 |
| MS.gene54678.t1 | AT4G13410 | 42.391 | 460 | 229 | 2 | 1 | 459 | 112 | 536 | 1.59e-134 | 399 |
| MS.gene54678.t1 | AT5G16190 | 43.043 | 460 | 230 | 3 | 1 | 459 | 14 | 442 | 4.15e-134 | 394 |
| MS.gene54678.t1 | AT5G16190 | 43.043 | 460 | 230 | 3 | 1 | 459 | 75 | 503 | 3.61e-133 | 394 |
| MS.gene54678.t1 | AT2G35650 | 49.322 | 369 | 186 | 1 | 1 | 368 | 48 | 416 | 1.67e-132 | 391 |
| MS.gene54678.t1 | AT2G35650 | 49.322 | 369 | 186 | 1 | 1 | 368 | 48 | 416 | 1.67e-132 | 391 |
| MS.gene54678.t1 | AT2G35650 | 49.322 | 369 | 186 | 1 | 1 | 368 | 120 | 488 | 2.38e-131 | 391 |
| MS.gene54678.t1 | AT1G24070 | 41.957 | 460 | 235 | 4 | 1 | 459 | 123 | 551 | 1.16e-129 | 387 |
| MS.gene54678.t1 | AT5G16190 | 49.051 | 369 | 187 | 1 | 1 | 368 | 75 | 443 | 2.30e-129 | 382 |
| MS.gene54678.t1 | AT5G16190 | 40.568 | 493 | 228 | 5 | 1 | 459 | 75 | 536 | 2.53e-126 | 377 |
| MS.gene54678.t1 | AT3G56000 | 41.202 | 466 | 238 | 5 | 1 | 462 | 93 | 526 | 1.13e-124 | 373 |
| MS.gene54678.t1 | AT1G23480 | 42.959 | 419 | 206 | 5 | 46 | 462 | 21 | 408 | 7.25e-114 | 341 |
| MS.gene54678.t1 | AT4G16590 | 38.178 | 461 | 217 | 4 | 1 | 459 | 125 | 519 | 1.44e-111 | 339 |
| MS.gene54678.t1 | AT2G35650 | 46.951 | 328 | 172 | 2 | 43 | 368 | 3 | 330 | 1.48e-108 | 327 |
| MS.gene54678.t1 | AT4G13410 | 39.364 | 409 | 212 | 2 | 52 | 459 | 2 | 375 | 1.57e-108 | 326 |
| MS.gene54678.t1 | AT4G13410 | 55.159 | 252 | 113 | 0 | 1 | 252 | 112 | 363 | 4.96e-98 | 300 |
| MS.gene54678.t1 | AT1G24070 | 53.968 | 252 | 116 | 0 | 1 | 252 | 123 | 374 | 1.44e-95 | 294 |
Find 87 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTCAATGCAATGGTTTC+TGG | 0.121832 | 6.1:+3671175 | MS.gene54678:CDS |
| ACAAGGAAAGGGACTGATTT+TGG | 0.216482 | 6.1:-3671115 | None:intergenic |
| TTGATAAGCATCTGTAAATT+AGG | 0.220610 | 6.1:-3669032 | None:intergenic |
| AGGTTTGGCATTCCTTGTTA+TGG | 0.243994 | 6.1:+3671507 | MS.gene54678:CDS |
| TGAACTAGTATTCTGTCTTT+TGG | 0.274513 | 6.1:-3668987 | None:intergenic |
| CAACAACATCGTTGGCATTC+TGG | 0.276703 | 6.1:+3670108 | MS.gene54678:CDS |
| GGCATTCCTTGTTATGGGTT+TGG | 0.289107 | 6.1:+3671513 | MS.gene54678:CDS |
| GGTTTGGCATTCCTTGTTAT+GGG | 0.296512 | 6.1:+3671508 | MS.gene54678:CDS |
| GAATAGAGTGAATGAGTAGA+AGG | 0.304418 | 6.1:-3670987 | None:intergenic |
| AGCTGGTGTTTGGAGGATTA+AGG | 0.304743 | 6.1:+3669933 | MS.gene54678:CDS |
| AAAGAACTTTAACATCATTA+AGG | 0.316833 | 6.1:-3670050 | None:intergenic |
| TTTGTAAGCTTCATAGGATT+CGG | 0.325734 | 6.1:-3670082 | None:intergenic |
| TGTTTGGAGGATTAAGGCTT+TGG | 0.326554 | 6.1:+3669939 | MS.gene54678:CDS |
| TCAAAGATGAGGTTTCTTCT+TGG | 0.332162 | 6.1:+3669051 | MS.gene54678:CDS |
| GAATCGGGTTTGGAGTTATT+AGG | 0.334902 | 6.1:+3671337 | MS.gene54678:CDS |
| GGCTATTTCTTGAATTTCTT+CGG | 0.340859 | 6.1:+3669898 | MS.gene54678:CDS |
| TGCATGAGGTAATCAGGATT+TGG | 0.350956 | 6.1:-3669212 | None:intergenic |
| CAAAGGGGTAGTTCTGATTC+AGG | 0.359856 | 6.1:-3671040 | None:intergenic |
| TTGAATTTCTTCGGATTCAA+TGG | 0.361556 | 6.1:+3669907 | MS.gene54678:CDS |
| ATGGTTTGCATGAGGTAATC+AGG | 0.371179 | 6.1:-3669218 | None:intergenic |
| GTGCTGCTTGTCAACTTGAT+TGG | 0.371683 | 6.1:+3668964 | MS.gene54678:CDS |
| TTCAGGTATGAACATTGTTA+AGG | 0.381616 | 6.1:-3671023 | None:intergenic |
| ATTAAGGCTTTGGAGGAATC+AGG | 0.382115 | 6.1:+3669949 | MS.gene54678:CDS |
| TTGTAAGCTTCATAGGATTC+GGG | 0.384558 | 6.1:-3670081 | None:intergenic |
| TCAATGGAACAGCTGGTGTT+TGG | 0.399437 | 6.1:+3669923 | MS.gene54678:CDS |
| AACTAGGAAGTGCTTATGAA+TGG | 0.406621 | 6.1:+3671206 | MS.gene54678:CDS |
| GCTGTTAGAGCTCATTTGAA+TGG | 0.419519 | 6.1:+3670012 | MS.gene54678:CDS |
| CTGAATCAGAACTACCCCTT+TGG | 0.424047 | 6.1:+3671041 | MS.gene54678:CDS |
| AAGGTTTATTCACAATCAAT+TGG | 0.427259 | 6.1:+3668942 | MS.gene54678:intron |
| TTGGAGGATTAAGGCTTTGG+AGG | 0.432850 | 6.1:+3669942 | MS.gene54678:CDS |
| AGACATAGATTGATCAGAAC+TGG | 0.436769 | 6.1:+3669101 | MS.gene54678:CDS |
| AAGACACTCAGAATCGGGTT+TGG | 0.439191 | 6.1:+3671327 | MS.gene54678:CDS |
| ATCAGAACTGGTTATAAAGC+AGG | 0.449774 | 6.1:+3669113 | MS.gene54678:CDS |
| TTCGGATTCAATGGAACAGC+TGG | 0.450845 | 6.1:+3669916 | MS.gene54678:CDS |
| CATAGAAGACACTCAGAATC+GGG | 0.454828 | 6.1:+3671322 | MS.gene54678:CDS |
| GTTATGGGTTTGGACTTGAT+TGG | 0.459333 | 6.1:+3671523 | MS.gene54678:CDS |
| TCAGGTATGAACATTGTTAA+GGG | 0.460385 | 6.1:-3671022 | None:intergenic |
| GCAAACCATTCCACATTTCA+AGG | 0.461691 | 6.1:+3669232 | MS.gene54678:CDS |
| GTTTCTTCTTGGAAAGAGAA+AGG | 0.463915 | 6.1:+3669062 | MS.gene54678:CDS |
| CAGAATACTAGTTCAAGTAT+TGG | 0.468734 | 6.1:+3668995 | MS.gene54678:CDS |
| GCATAGAAGACACTCAGAAT+CGG | 0.469925 | 6.1:+3671321 | MS.gene54678:CDS |
| GACATAACAGATTACCCAAA+GGG | 0.470550 | 6.1:-3671056 | None:intergenic |
| ACTAGGAAGTGCTTATGAAT+GGG | 0.484196 | 6.1:+3671207 | MS.gene54678:CDS |
| TTAGAGCTCATTTGAATGGA+TGG | 0.488550 | 6.1:+3670016 | MS.gene54678:CDS |
| TGAATCAGAACTACCCCTTT+GGG | 0.489082 | 6.1:+3671042 | MS.gene54678:CDS |
| TGGGTTGTGACAAAGAAAAC+AGG | 0.496608 | 6.1:+3671226 | MS.gene54678:CDS |
| ATGGAACAGCTGGTGTTTGG+AGG | 0.497020 | 6.1:+3669926 | MS.gene54678:CDS |
| GCTTGAACTAGTCCCAAGTC+AGG | 0.499333 | 6.1:-3669781 | None:intergenic |
| AGAAGATAAGGGACAAGGAA+AGG | 0.499401 | 6.1:-3671127 | None:intergenic |
| GAGGTTGAACAACAAGTGAA+TGG | 0.500232 | 6.1:+3669877 | MS.gene54678:CDS |
| TTTCTTCTTGGAAAGAGAAA+GGG | 0.503845 | 6.1:+3669063 | MS.gene54678:CDS |
| TCTGAGTGTCTTCTATGCAA+TGG | 0.510526 | 6.1:-3671316 | None:intergenic |
| TTTATAGGGAAAACCTGACT+TGG | 0.513915 | 6.1:+3669768 | MS.gene54678:intron |
| TGTTCTCGAAAAGAAGATAA+GGG | 0.514946 | 6.1:-3671138 | None:intergenic |
| GTGTTCTCGAAAAGAAGATA+AGG | 0.521135 | 6.1:-3671139 | None:intergenic |
| CTTTGGAGGAATCAGGCGGT+TGG | 0.522058 | 6.1:+3669956 | MS.gene54678:CDS |
| AATAGAGTGAATGAGTAGAA+GGG | 0.524542 | 6.1:-3670986 | None:intergenic |
| GGAGGAATCAGGCGGTTGGT+TGG | 0.525711 | 6.1:+3669960 | MS.gene54678:CDS |
| AATCAGGCGGTTGGTTGGAA+AGG | 0.526492 | 6.1:+3669965 | MS.gene54678:CDS |
| GAAGATAAGGGACAAGGAAA+GGG | 0.526734 | 6.1:-3671126 | None:intergenic |
| ACCTTGGCAGTTAATACAGC+AGG | 0.530600 | 6.1:-3670159 | None:intergenic |
| ATAATGCTTACCTTGAAATG+TGG | 0.531008 | 6.1:-3669242 | None:intergenic |
| GGTTACAAAGTTCAATGCAA+TGG | 0.535120 | 6.1:+3671168 | MS.gene54678:CDS |
| TTTAAGAACGACATGACGAT+AGG | 0.555206 | 6.1:-3671079 | None:intergenic |
| GGAATCTGAACAAGAACCAT+AGG | 0.556670 | 6.1:-3668222 | None:intergenic |
| GTTTCTGGACTATTTCAACT+AGG | 0.563242 | 6.1:+3671190 | MS.gene54678:CDS |
| TTATAGGGAAAACCTGACTT+GGG | 0.571386 | 6.1:+3669769 | MS.gene54678:intron |
| AAGGACAACAGTTGAGGACA+TGG | 0.574551 | 6.1:+3669984 | MS.gene54678:CDS |
| ACAGATGCTTATCAAAGATG+AGG | 0.575011 | 6.1:+3669040 | MS.gene54678:CDS |
| CGAAAAGAAGATAAGGGACA+AGG | 0.577643 | 6.1:-3671132 | None:intergenic |
| CAAAATTCAGAAAACAGAAG+TGG | 0.579115 | 6.1:+3671360 | MS.gene54678:CDS |
| ACCTCTCTTTCATTACACAT+TGG | 0.581973 | 6.1:-3668243 | None:intergenic |
| TTCTTCTTGGAAAGAGAAAG+GGG | 0.584512 | 6.1:+3669064 | MS.gene54678:CDS |
| TCCAATGTGTAATGAAAGAG+AGG | 0.588056 | 6.1:+3668242 | MS.gene54678:CDS |
| TCCTGCTGTATTAACTGCCA+AGG | 0.589090 | 6.1:+3670158 | MS.gene54678:CDS |
| GCTTACCTTGAAATGTGGAA+TGG | 0.591995 | 6.1:-3669237 | None:intergenic |
| GTTGGAAAGGACAACAGTTG+AGG | 0.595256 | 6.1:+3669978 | MS.gene54678:CDS |
| TGGGACTAGTTCAAGCAAGA+TGG | 0.596166 | 6.1:+3669788 | MS.gene54678:CDS |
| GCAGATATCAGTATGGAAGA+AGG | 0.599135 | 6.1:+3670919 | MS.gene54678:intron |
| TTAAGAACGACATGACGATA+GGG | 0.607062 | 6.1:-3671078 | None:intergenic |
| TCAGAACTGGTTATAAAGCA+GGG | 0.612201 | 6.1:+3669114 | MS.gene54678:CDS |
| TCAAGTCCAAACCCATAACA+AGG | 0.641675 | 6.1:-3671519 | None:intergenic |
| AAGATGAGAATCTTCTAACA+AGG | 0.662993 | 6.1:+3669824 | MS.gene54678:CDS |
| GGACATAACAGATTACCCAA+AGG | 0.694073 | 6.1:-3671057 | None:intergenic |
| AATGTGGAATGGTTTGCATG+AGG | 0.700691 | 6.1:-3669226 | None:intergenic |
| AAGGCTTTGGAGGAATCAGG+CGG | 0.701186 | 6.1:+3669952 | MS.gene54678:CDS |
| ACATAACAGATTACCCAAAG+GGG | 0.714598 | 6.1:-3671055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATATAATATTGGAAAA+TGG | + | chr6.1:3669325-3669344 | MS.gene54678:intron | 15.0% |
| !! | ATAAGAAGAACAAAAATATT+AGG | - | chr6.1:3670949-3670968 | None:intergenic | 15.0% |
| !! | TACCAAAAATAATGTAAAAT+TGG | - | chr6.1:3668386-3668405 | None:intergenic | 15.0% |
| !!! | AATTTTCAAAACATTGTTTT+CGG | - | chr6.1:3669612-3669631 | None:intergenic | 15.0% |
| !!! | ATAATGGATTAAATTATGAT+TGG | + | chr6.1:3668672-3668691 | MS.gene54678:intron | 15.0% |
| !!! | TTCCAATTTTACATTATTTT+TGG | + | chr6.1:3668381-3668400 | MS.gene54678:intron | 15.0% |
| !! | AAAGAACTTTAACATCATTA+AGG | - | chr6.1:3670053-3670072 | None:intergenic | 20.0% |
| !! | AAATTTCAGTTGCAAAAATT+TGG | - | chr6.1:3670844-3670863 | None:intergenic | 20.0% |
| !! | AATGTAAAATTGGAAAATCA+TGG | - | chr6.1:3668376-3668395 | None:intergenic | 20.0% |
| !! | AATTTCAGTTGCAAAAATTT+GGG | - | chr6.1:3670843-3670862 | None:intergenic | 20.0% |
| !! | ATTAAATTATGATTGGAACT+TGG | + | chr6.1:3668679-3668698 | MS.gene54678:intron | 20.0% |
| !! | ATTCAATTATGATTGCAATT+TGG | + | chr6.1:3668337-3668356 | MS.gene54678:intron | 20.0% |
| !! | TAAGACAAAAAATGGAAAAA+TGG | - | chr6.1:3668728-3668747 | None:intergenic | 20.0% |
| !! | TAATTAAGCACTTATAGTAT+AGG | - | chr6.1:3670744-3670763 | None:intergenic | 20.0% |
| !! | TTGATTCTAATCTATGATTT+AGG | + | chr6.1:3668282-3668301 | MS.gene54678:intron | 20.0% |
| !!! | AATTTTTCATTGTCCTTATT+TGG | - | chr6.1:3669476-3669495 | None:intergenic | 20.0% |
| !!! | CTACTTTTTATAAACTATCT+TGG | + | chr6.1:3670536-3670555 | MS.gene54678:intron | 20.0% |
| !!! | TAATACATATTTTATCTGTG+AGG | + | chr6.1:3669692-3669711 | MS.gene54678:intron | 20.0% |
| !!! | TATTTTTGTTCTTCTTATTG+AGG | + | chr6.1:3670951-3670970 | MS.gene54678:CDS | 20.0% |
| ! | AAGGTTTATTCACAATCAAT+TGG | + | chr6.1:3668942-3668961 | MS.gene54678:intron | 25.0% |
| ! | AATAAGAATTAGCAATACCT+TGG | - | chr6.1:3670178-3670197 | None:intergenic | 25.0% |
| ! | AGAAGAAAAACAAACTCTAT+AGG | + | chr6.1:3671392-3671411 | MS.gene54678:CDS | 25.0% |
| ! | ATTTCAGTTGCAAAAATTTG+GGG | - | chr6.1:3670842-3670861 | None:intergenic | 25.0% |
| ! | CAAACATCTTATGTGTATAT+TGG | + | chr6.1:3668314-3668333 | MS.gene54678:intron | 25.0% |
| ! | TAAGCATTATAAATAAGCCA+AGG | + | chr6.1:3669255-3669274 | MS.gene54678:intron | 25.0% |
| ! | TGGAAAATCATGTATGAATT+AGG | - | chr6.1:3668708-3668727 | None:intergenic | 25.0% |
| ! | TGTCAAAAACTATGAATTTG+TGG | + | chr6.1:3669166-3669185 | MS.gene54678:CDS | 25.0% |
| ! | TTCAACTTTATAGTGTAACA+TGG | + | chr6.1:3670203-3670222 | MS.gene54678:intron | 25.0% |
| ! | TTGATAAGCATCTGTAAATT+AGG | - | chr6.1:3669035-3669054 | None:intergenic | 25.0% |
| !! | ATGTAAGTAAATTCTAGCTA+AGG | + | chr6.1:3668477-3668496 | MS.gene54678:intron | 25.0% |
| !! | TATGAACATAGTTTGACTTT+AGG | + | chr6.1:3670433-3670452 | MS.gene54678:intron | 25.0% |
| !!! | ATTTTCGTGACTTTGTTTAT+AGG | + | chr6.1:3669753-3669772 | MS.gene54678:intron | 25.0% |
| !!! | TTCTATTTCTTGCTTTTTCA+AGG | + | chr6.1:3671487-3671506 | MS.gene54678:CDS | 25.0% |
| !!! | TTGTTTTTTGTAAGCTTCAT+AGG | - | chr6.1:3670091-3670110 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGTTTTTGAGTGA+AGG | + | chr6.1:3668923-3668942 | MS.gene54678:intron | 25.0% |
| !!! | TTTTCGTGACTTTGTTTATA+GGG | + | chr6.1:3669754-3669773 | MS.gene54678:intron | 25.0% |
| AAGATGAGAATCTTCTAACA+AGG | + | chr6.1:3669824-3669843 | MS.gene54678:CDS | 30.0% | |
| AATAGAGTGAATGAGTAGAA+GGG | - | chr6.1:3670989-3671008 | None:intergenic | 30.0% | |
| ACAAAAAACAACAACATCGT+TGG | + | chr6.1:3670100-3670119 | MS.gene54678:CDS | 30.0% | |
| ATAATGCTTACCTTGAAATG+TGG | - | chr6.1:3669245-3669264 | None:intergenic | 30.0% | |
| ATGTATTACATACAACAGTG+AGG | - | chr6.1:3669680-3669699 | None:intergenic | 30.0% | |
| CAAAATTCAGAAAACAGAAG+TGG | + | chr6.1:3671360-3671379 | MS.gene54678:CDS | 30.0% | |
| CAGAATACTAGTTCAAGTAT+TGG | + | chr6.1:3668995-3669014 | MS.gene54678:CDS | 30.0% | |
| CCATGAATATTGAATCAATC+AGG | - | chr6.1:3668837-3668856 | None:intergenic | 30.0% | |
| CTTGTACAAATTTCTAAGCA+TGG | - | chr6.1:3670871-3670890 | None:intergenic | 30.0% | |
| GCAATTAAAAAGTCTGATCA+AGG | + | chr6.1:3668588-3668607 | MS.gene54678:intron | 30.0% | |
| GCTAGAATTTACTTACATAC+CGG | - | chr6.1:3668475-3668494 | None:intergenic | 30.0% | |
| TATTGGTATAAGAACTTGTG+AGG | - | chr6.1:3670635-3670654 | None:intergenic | 30.0% | |
| TCAGGTATGAACATTGTTAA+GGG | - | chr6.1:3671025-3671044 | None:intergenic | 30.0% | |
| TGAAAACTGTAAATGTGGTT+AGG | - | chr6.1:3669514-3669533 | None:intergenic | 30.0% | |
| TGATTTATTAGCATAAGCAC+TGG | + | chr6.1:3670295-3670314 | MS.gene54678:intron | 30.0% | |
| TGTTCTCGAAAAGAAGATAA+GGG | - | chr6.1:3671141-3671160 | None:intergenic | 30.0% | |
| TTCAGGTATGAACATTGTTA+AGG | - | chr6.1:3671026-3671045 | None:intergenic | 30.0% | |
| TTGAATTTCTTCGGATTCAA+TGG | + | chr6.1:3669907-3669926 | MS.gene54678:CDS | 30.0% | |
| TTGCAAAAATTTGGGGATAA+TGG | - | chr6.1:3670835-3670854 | None:intergenic | 30.0% | |
| TTTCTTCTTGGAAAGAGAAA+GGG | + | chr6.1:3669063-3669082 | MS.gene54678:CDS | 30.0% | |
| TTTGTAAGCTTCATAGGATT+CGG | - | chr6.1:3670085-3670104 | None:intergenic | 30.0% | |
| ! | AACATTGTTTTCGGTATTTC+TGG | - | chr6.1:3669603-3669622 | None:intergenic | 30.0% |
| ! | ACATATTTTATCTGTGAGGA+TGG | + | chr6.1:3669696-3669715 | MS.gene54678:intron | 30.0% |
| ! | ATTGTCCTTATTTGGCTTAT+GGG | - | chr6.1:3669468-3669487 | None:intergenic | 30.0% |
| ! | CCTGATTGATTCAATATTCA+TGG | + | chr6.1:3668834-3668853 | MS.gene54678:intron | 30.0% |
| ! | GATTGATTCAATATTCATGG+AGG | + | chr6.1:3668837-3668856 | MS.gene54678:intron | 30.0% |
| ! | TCCATTATACACATTAGCTT+CGG | - | chr6.1:3668660-3668679 | None:intergenic | 30.0% |
| ! | TGAACTAGTATTCTGTCTTT+TGG | - | chr6.1:3668990-3669009 | None:intergenic | 30.0% |
| ! | TTTTTGTGCAGATATCAGTA+TGG | + | chr6.1:3670912-3670931 | MS.gene54678:intron | 30.0% |
| !! | GGCTATTTCTTGAATTTCTT+CGG | + | chr6.1:3669898-3669917 | MS.gene54678:CDS | 30.0% |
| !!! | TGTAACATGGTTTTAGATTG+CGG | + | chr6.1:3670216-3670235 | MS.gene54678:intron | 30.0% |
| !!! | TTTCTTGCTTTTTCAAGGTT+TGG | + | chr6.1:3671492-3671511 | MS.gene54678:CDS | 30.0% |
| AAGTTCAATGCAATGGTTTC+TGG | + | chr6.1:3671175-3671194 | MS.gene54678:CDS | 35.0% | |
| AATGTGGTTAGGAAGTAAAC+AGG | - | chr6.1:3669503-3669522 | None:intergenic | 35.0% | |
| ACAAAGTCACGAAAATCGTT+AGG | - | chr6.1:3669749-3669768 | None:intergenic | 35.0% | |
| ACAGATGCTTATCAAAGATG+AGG | + | chr6.1:3669040-3669059 | MS.gene54678:CDS | 35.0% | |
| ACATAACAGATTACCCAAAG+GGG | - | chr6.1:3671058-3671077 | None:intergenic | 35.0% | |
| ACCTCTCTTTCATTACACAT+TGG | - | chr6.1:3668246-3668265 | None:intergenic | 35.0% | |
| AGACATAGATTGATCAGAAC+TGG | + | chr6.1:3669101-3669120 | MS.gene54678:CDS | 35.0% | |
| ATCAGAACTGGTTATAAAGC+AGG | + | chr6.1:3669113-3669132 | MS.gene54678:CDS | 35.0% | |
| ATGTGATGAATGACAGAAGA+CGG | + | chr6.1:3669553-3669572 | MS.gene54678:intron | 35.0% | |
| CAAAGTCACGAAAATCGTTA+GGG | - | chr6.1:3669748-3669767 | None:intergenic | 35.0% | |
| CAGAGGGTTAAGACAAAAAA+TGG | - | chr6.1:3668736-3668755 | None:intergenic | 35.0% | |
| CATAGCCTAAAAAGTTGCAT+AGG | - | chr6.1:3670135-3670154 | None:intergenic | 35.0% | |
| GAATAGAGTGAATGAGTAGA+AGG | - | chr6.1:3670990-3671009 | None:intergenic | 35.0% | |
| GACACTGAAAACTGTAAATG+TGG | - | chr6.1:3669519-3669538 | None:intergenic | 35.0% | |
| GACATAACAGATTACCCAAA+GGG | - | chr6.1:3671059-3671078 | None:intergenic | 35.0% | |
| GGTTACAAAGTTCAATGCAA+TGG | + | chr6.1:3671168-3671187 | MS.gene54678:CDS | 35.0% | |
| GTGTTCTCGAAAAGAAGATA+AGG | - | chr6.1:3671142-3671161 | None:intergenic | 35.0% | |
| GTTTCTTCTTGGAAAGAGAA+AGG | + | chr6.1:3669062-3669081 | MS.gene54678:CDS | 35.0% | |
| TATTAGCAAGAGTTCGAACT+CGG | + | chr6.1:3668504-3668523 | MS.gene54678:intron | 35.0% | |
| TCAAAGATGAGGTTTCTTCT+TGG | + | chr6.1:3669051-3669070 | MS.gene54678:CDS | 35.0% | |
| TCAGAACTGGTTATAAAGCA+GGG | + | chr6.1:3669114-3669133 | MS.gene54678:CDS | 35.0% | |
| TCCAATGTGTAATGAAAGAG+AGG | + | chr6.1:3668242-3668261 | MS.gene54678:CDS | 35.0% | |
| TTAAGAACGACATGACGATA+GGG | - | chr6.1:3671081-3671100 | None:intergenic | 35.0% | |
| TTAGAGCTCATTTGAATGGA+TGG | + | chr6.1:3670016-3670035 | MS.gene54678:CDS | 35.0% | |
| TTATAGGGAAAACCTGACTT+GGG | + | chr6.1:3669769-3669788 | MS.gene54678:intron | 35.0% | |
| TTATCTGTGAGGATGGAATA+AGG | + | chr6.1:3669703-3669722 | MS.gene54678:intron | 35.0% | |
| TTCTATCTTCACCGGTAATT+TGG | + | chr6.1:3668541-3668560 | MS.gene54678:intron | 35.0% | |
| TTCTTCTTGGAAAGAGAAAG+GGG | + | chr6.1:3669064-3669083 | MS.gene54678:CDS | 35.0% | |
| TTGTAAGCTTCATAGGATTC+GGG | - | chr6.1:3670084-3670103 | None:intergenic | 35.0% | |
| TTTAAGAACGACATGACGAT+AGG | - | chr6.1:3671082-3671101 | None:intergenic | 35.0% | |
| TTTATAAGCTCTCCACCATA+TGG | - | chr6.1:3670493-3670512 | None:intergenic | 35.0% | |
| TTTATAGGGAAAACCTGACT+TGG | + | chr6.1:3669768-3669787 | MS.gene54678:intron | 35.0% | |
| TTTATCCAAACAAGTCCTAG+AGG | + | chr6.1:3670769-3670788 | MS.gene54678:intron | 35.0% | |
| ! | CAAAAATTTGGGGATAATGG+TGG | - | chr6.1:3670832-3670851 | None:intergenic | 35.0% |
| ! | CAACTTGTGTTTTCACTTTG+AGG | + | chr6.1:3669858-3669877 | MS.gene54678:CDS | 35.0% |
| ! | CATTGTCCTTATTTGGCTTA+TGG | - | chr6.1:3669469-3669488 | None:intergenic | 35.0% |
| ! | CCATTATACACATTAGCTTC+GGG | - | chr6.1:3668659-3668678 | None:intergenic | 35.0% |
| ! | GTTTCTGGACTATTTCAACT+AGG | + | chr6.1:3671190-3671209 | MS.gene54678:CDS | 35.0% |
| ! | GTTTGACTTTAGGCTCTATT+TGG | + | chr6.1:3670443-3670462 | MS.gene54678:intron | 35.0% |
| ! | TGCTGCAACATAAGGTTTTA+GGG | + | chr6.1:3670247-3670266 | MS.gene54678:intron | 35.0% |
| !! | AACTAGGAAGTGCTTATGAA+TGG | + | chr6.1:3671206-3671225 | MS.gene54678:CDS | 35.0% |
| !! | ACTAGGAAGTGCTTATGAAT+GGG | + | chr6.1:3671207-3671226 | MS.gene54678:CDS | 35.0% |
| !! | TCTTTTCGAGAACACAATGT+CGG | + | chr6.1:3671147-3671166 | MS.gene54678:CDS | 35.0% |
| !!! | CAATGCAAACATGCTACTTT+TGG | + | chr6.1:3669396-3669415 | MS.gene54678:intron | 35.0% |
| AACAAGTGTTTGAGCCCAAA+TGG | - | chr6.1:3668871-3668890 | None:intergenic | 40.0% | |
| AACCCTAGTTGGACAATCAT+TGG | - | chr6.1:3668800-3668819 | None:intergenic | 40.0% | |
| ACATTTCCCTTGAGAATCAG+AGG | - | chr6.1:3668753-3668772 | None:intergenic | 40.0% | |
| AGAAGATAAGGGACAAGGAA+AGG | - | chr6.1:3671130-3671149 | None:intergenic | 40.0% | |
| AGGTTTGGCATTCCTTGTTA+TGG | + | chr6.1:3671507-3671526 | MS.gene54678:CDS | 40.0% | |
| ATCGTAATTCGAACCCTAGT+TGG | - | chr6.1:3668811-3668830 | None:intergenic | 40.0% | |
| ATGGAGGCTTATTAGCCATT+TGG | + | chr6.1:3668853-3668872 | MS.gene54678:intron | 40.0% | |
| CAAGACCCATAAGCCAAATA+AGG | + | chr6.1:3669460-3669479 | MS.gene54678:intron | 40.0% | |
| CATAGAAGACACTCAGAATC+GGG | + | chr6.1:3671322-3671341 | MS.gene54678:CDS | 40.0% | |
| CATTTCCCTTGAGAATCAGA+GGG | - | chr6.1:3668752-3668771 | None:intergenic | 40.0% | |
| CCAATAGACAAGCTCAGATA+AGG | + | chr6.1:3670649-3670668 | MS.gene54678:intron | 40.0% | |
| CCCGAAGCTAATGTGTATAA+TGG | + | chr6.1:3668656-3668675 | MS.gene54678:intron | 40.0% | |
| CCGGTCAAATTCCAAATTAC+CGG | - | chr6.1:3668555-3668574 | None:intergenic | 40.0% | |
| CCTTATCTGAGCTTGTCTAT+TGG | - | chr6.1:3670652-3670671 | None:intergenic | 40.0% | |
| CGAAAAGAAGATAAGGGACA+AGG | - | chr6.1:3671135-3671154 | None:intergenic | 40.0% | |
| CGGTGAAGATAGAATCGATT+GGG | - | chr6.1:3668535-3668554 | None:intergenic | 40.0% | |
| CTTAACCCTCTGATTCTCAA+GGG | + | chr6.1:3668744-3668763 | MS.gene54678:intron | 40.0% | |
| GAAGATAAGGGACAAGGAAA+GGG | - | chr6.1:3671129-3671148 | None:intergenic | 40.0% | |
| GACCAATGATTGTCCAACTA+GGG | + | chr6.1:3668795-3668814 | MS.gene54678:intron | 40.0% | |
| GAGGTTGAACAACAAGTGAA+TGG | + | chr6.1:3669877-3669896 | MS.gene54678:CDS | 40.0% | |
| GCAAACCATTCCACATTTCA+AGG | + | chr6.1:3669232-3669251 | MS.gene54678:CDS | 40.0% | |
| GCAGATATCAGTATGGAAGA+AGG | + | chr6.1:3670919-3670938 | MS.gene54678:intron | 40.0% | |
| GCATAGAAGACACTCAGAAT+CGG | + | chr6.1:3671321-3671340 | MS.gene54678:CDS | 40.0% | |
| GCTGAAAACAGTTTGTGATC+AGG | + | chr6.1:3670576-3670595 | MS.gene54678:intron | 40.0% | |
| GCTGTTAGAGCTCATTTGAA+TGG | + | chr6.1:3670012-3670031 | MS.gene54678:CDS | 40.0% | |
| GCTTACCTTGAAATGTGGAA+TGG | - | chr6.1:3669240-3669259 | None:intergenic | 40.0% | |
| GGACATAACAGATTACCCAA+AGG | - | chr6.1:3671060-3671079 | None:intergenic | 40.0% | |
| GTCAGCATCAGATGTAACAT+TGG | - | chr6.1:3668897-3668916 | None:intergenic | 40.0% | |
| GTTATGGGTTTGGACTTGAT+TGG | + | chr6.1:3671523-3671542 | MS.gene54678:CDS | 40.0% | |
| TCAAGTCCAAACCCATAACA+AGG | - | chr6.1:3671522-3671541 | None:intergenic | 40.0% | |
| TCTGAGTGTCTTCTATGCAA+TGG | - | chr6.1:3671319-3671338 | None:intergenic | 40.0% | |
| TCTTAACCCTCTGATTCTCA+AGG | + | chr6.1:3668743-3668762 | MS.gene54678:intron | 40.0% | |
| TGAATCAGAACTACCCCTTT+GGG | + | chr6.1:3671042-3671061 | MS.gene54678:CDS | 40.0% | |
| TGACCAATGATTGTCCAACT+AGG | + | chr6.1:3668794-3668813 | MS.gene54678:intron | 40.0% | |
| TGCATGAGGTAATCAGGATT+TGG | - | chr6.1:3669215-3669234 | None:intergenic | 40.0% | |
| TGGAGGCTTATTAGCCATTT+GGG | + | chr6.1:3668854-3668873 | MS.gene54678:intron | 40.0% | |
| TGGGTTGTGACAAAGAAAAC+AGG | + | chr6.1:3671226-3671245 | MS.gene54678:CDS | 40.0% | |
| TGTTTGGAGGATTAAGGCTT+TGG | + | chr6.1:3669939-3669958 | MS.gene54678:CDS | 40.0% | |
| TTTACCAAGCCCTTACCATA+TGG | + | chr6.1:3670475-3670494 | MS.gene54678:intron | 40.0% | |
| ! | AATGTGGAATGGTTTGCATG+AGG | - | chr6.1:3669229-3669248 | None:intergenic | 40.0% |
| ! | AGAAGTCTTTTAGCAGCACA+TGG | + | chr6.1:3671457-3671476 | MS.gene54678:CDS | 40.0% |
| ! | ATGGTTTGCATGAGGTAATC+AGG | - | chr6.1:3669221-3669240 | None:intergenic | 40.0% |
| ! | CCAATCGATTCTATCTTCAC+CGG | + | chr6.1:3668533-3668552 | MS.gene54678:intron | 40.0% |
| ! | CCGGTAATTTGGAATTTGAC+CGG | + | chr6.1:3668552-3668571 | MS.gene54678:intron | 40.0% |
| ! | CTGCTGCAACATAAGGTTTT+AGG | + | chr6.1:3670246-3670265 | MS.gene54678:intron | 40.0% |
| ! | CTGGTCCTATGCAACTTTTT+AGG | + | chr6.1:3670127-3670146 | MS.gene54678:CDS | 40.0% |
| ! | GAATCGGGTTTGGAGTTATT+AGG | + | chr6.1:3671337-3671356 | MS.gene54678:CDS | 40.0% |
| ! | GGTTTGGCATTCCTTGTTAT+GGG | + | chr6.1:3671508-3671527 | MS.gene54678:CDS | 40.0% |
| ! | GTAATTTGGAATTTGACCGG+TGG | + | chr6.1:3668555-3668574 | MS.gene54678:intron | 40.0% |
| !! | AAAGGGACTGATTTTGGTGA+TGG | - | chr6.1:3671112-3671131 | None:intergenic | 40.0% |
| !! | ACAAGGAAAGGGACTGATTT+TGG | - | chr6.1:3671118-3671137 | None:intergenic | 40.0% |
| !! | ATTAAGGCTTTGGAGGAATC+AGG | + | chr6.1:3669949-3669968 | MS.gene54678:CDS | 40.0% |
| AAGACACTCAGAATCGGGTT+TGG | + | chr6.1:3671327-3671346 | MS.gene54678:CDS | 45.0% | |
| AAGCTCTCCACCATATGGTA+AGG | - | chr6.1:3670488-3670507 | None:intergenic | 45.0% | |
| AAGGACAACAGTTGAGGACA+TGG | + | chr6.1:3669984-3670003 | MS.gene54678:CDS | 45.0% | |
| AATGCTAACCATTGCCCTTG+GGG | + | chr6.1:3669280-3669299 | MS.gene54678:intron | 45.0% | |
| AATTGCCAGTCAAACTCCAC+CGG | - | chr6.1:3668574-3668593 | None:intergenic | 45.0% | |
| ACCTTGGCAGTTAATACAGC+AGG | - | chr6.1:3670162-3670181 | None:intergenic | 45.0% | |
| AGAATGCTAACCATTGCCCT+TGG | + | chr6.1:3669278-3669297 | MS.gene54678:intron | 45.0% | |
| AGCTCTCCACCATATGGTAA+GGG | - | chr6.1:3670487-3670506 | None:intergenic | 45.0% | |
| AGCTGGTGTTTGGAGGATTA+AGG | + | chr6.1:3669933-3669952 | MS.gene54678:CDS | 45.0% | |
| CAACAACATCGTTGGCATTC+TGG | + | chr6.1:3670108-3670127 | MS.gene54678:CDS | 45.0% | |
| CCGGTGAAGATAGAATCGAT+TGG | - | chr6.1:3668536-3668555 | None:intergenic | 45.0% | |
| CTCGGAATCAGAGAGTTAGA+GGG | - | chr6.1:3668413-3668432 | None:intergenic | 45.0% | |
| CTGAATCAGAACTACCCCTT+TGG | + | chr6.1:3671041-3671060 | MS.gene54678:CDS | 45.0% | |
| GAATGCTAACCATTGCCCTT+GGG | + | chr6.1:3669279-3669298 | MS.gene54678:intron | 45.0% | |
| GATTACCCTAGCTCACAGTT+TGG | - | chr6.1:3668624-3668643 | None:intergenic | 45.0% | |
| GCAATGGTTAGCATTCTCCT+TGG | - | chr6.1:3669275-3669294 | None:intergenic | 45.0% | |
| GTTGGAAAGGACAACAGTTG+AGG | + | chr6.1:3669978-3669997 | MS.gene54678:CDS | 45.0% | |
| TCAATGGAACAGCTGGTGTT+TGG | + | chr6.1:3669923-3669942 | MS.gene54678:CDS | 45.0% | |
| TCAGATGCTGCTGCAACATA+AGG | + | chr6.1:3670239-3670258 | MS.gene54678:intron | 45.0% | |
| TCCAACCAAACTGTGAGCTA+GGG | + | chr6.1:3668616-3668635 | MS.gene54678:intron | 45.0% | |
| TCCTGCTGTATTAACTGCCA+AGG | + | chr6.1:3670158-3670177 | MS.gene54678:CDS | 45.0% | |
| TCTCGGAATCAGAGAGTTAG+AGG | - | chr6.1:3668414-3668433 | None:intergenic | 45.0% | |
| TTCCAACCAAACTGTGAGCT+AGG | + | chr6.1:3668615-3668634 | MS.gene54678:intron | 45.0% | |
| TTCCTTAACCATTGCCCTCA+GGG | + | chr6.1:3669420-3669439 | MS.gene54678:intron | 45.0% | |
| TTCGGATTCAATGGAACAGC+TGG | + | chr6.1:3669916-3669935 | MS.gene54678:CDS | 45.0% | |
| TTGCAATAGCAGAGACCTCT+AGG | - | chr6.1:3670787-3670806 | None:intergenic | 45.0% | |
| ! | CTGGTAATCTGGAGTTAGAC+CGG | + | chr6.1:3668453-3668472 | MS.gene54678:intron | 45.0% |
| ! | GGCATTCCTTGTTATGGGTT+TGG | + | chr6.1:3671513-3671532 | MS.gene54678:CDS | 45.0% |
| ! | TTGGAGGATTAAGGCTTTGG+AGG | + | chr6.1:3669942-3669961 | MS.gene54678:CDS | 45.0% |
| !! | AGAGACCTCTAGGACTTGTT+TGG | - | chr6.1:3670777-3670796 | None:intergenic | 45.0% |
| !! | CAAAGGGGTAGTTCTGATTC+AGG | - | chr6.1:3671043-3671062 | None:intergenic | 45.0% |
| !! | GTGCTGCTTGTCAACTTGAT+TGG | + | chr6.1:3668964-3668983 | MS.gene54678:CDS | 45.0% |
| !! | TGGGACTAGTTCAAGCAAGA+TGG | + | chr6.1:3669788-3669807 | MS.gene54678:CDS | 45.0% |
| !!! | GGACTGATTTTGGTGATGGA+AGG | - | chr6.1:3671108-3671127 | None:intergenic | 45.0% |
| !! | TAAAAATAGAAATATAATAT+TGG | + | chr6.1:3669318-3669337 | MS.gene54678:intron | 5.0% |
| ACCAAGCCCTTACCATATGG+TGG | + | chr6.1:3670478-3670497 | MS.gene54678:intron | 50.0% | |
| ACCCTAGCTCACAGTTTGGT+TGG | - | chr6.1:3668620-3668639 | None:intergenic | 50.0% | |
| ATGGAACAGCTGGTGTTTGG+AGG | + | chr6.1:3669926-3669945 | MS.gene54678:CDS | 50.0% | |
| CTTCCTTAACCATTGCCCTC+AGG | + | chr6.1:3669419-3669438 | MS.gene54678:intron | 50.0% | |
| GCTTGAACTAGTCCCAAGTC+AGG | - | chr6.1:3669784-3669803 | None:intergenic | 50.0% | |
| TCCACCATATGGTAAGGGCT+TGG | - | chr6.1:3670482-3670501 | None:intergenic | 50.0% | |
| TGATTCCGAGAGCGAGCAAA+GGG | + | chr6.1:3668423-3668442 | MS.gene54678:intron | 50.0% | |
| TTTGACCGGTGGAGTTTGAC+TGG | + | chr6.1:3668566-3668585 | MS.gene54678:intron | 50.0% | |
| ! | AATCAGGCGGTTGGTTGGAA+AGG | + | chr6.1:3669965-3669984 | MS.gene54678:CDS | 50.0% |
| ! | AGGCTGTTTCAGAGAGCTTG+TGG | - | chr6.1:3670615-3670634 | None:intergenic | 50.0% |
| !! | AAGGCTTTGGAGGAATCAGG+CGG | + | chr6.1:3669952-3669971 | MS.gene54678:CDS | 50.0% |
| AACCATTGCCCTTGGGGCAT+TGG | + | chr6.1:3669286-3669305 | MS.gene54678:intron | 55.0% | |
| AGCCCTGAGGGCAATGGTTA+AGG | - | chr6.1:3669425-3669444 | None:intergenic | 55.0% | |
| ATCCAATGCCCCAAGGGCAA+TGG | - | chr6.1:3669291-3669310 | None:intergenic | 55.0% | |
| CCCCTTATCCAATGCCCCAA+GGG | - | chr6.1:3669297-3669316 | None:intergenic | 55.0% | |
| CTGATTCCGAGAGCGAGCAA+AGG | + | chr6.1:3668422-3668441 | MS.gene54678:intron | 55.0% | |
| GATTCCGAGAGCGAGCAAAG+GGG | + | chr6.1:3668424-3668443 | MS.gene54678:intron | 55.0% | |
| TCCCCTTATCCAATGCCCCA+AGG | - | chr6.1:3669298-3669317 | None:intergenic | 55.0% | |
| ! | CTTTGGAGGAATCAGGCGGT+TGG | + | chr6.1:3669956-3669975 | MS.gene54678:CDS | 55.0% |
| !! | CCCTTGGGGCATTGGATAAG+GGG | + | chr6.1:3669294-3669313 | MS.gene54678:intron | 55.0% |
| !! | GCCCTTGGGGCATTGGATAA+GGG | + | chr6.1:3669293-3669312 | MS.gene54678:intron | 55.0% |
| !! | TGCCCTTGGGGCATTGGATA+AGG | + | chr6.1:3669292-3669311 | MS.gene54678:intron | 55.0% |
| AACCATTGCCCTCAGGGCTC+AGG | + | chr6.1:3669426-3669445 | MS.gene54678:intron | 60.0% | |
| AACCATTGCCCTGAGCCCTG+AGG | - | chr6.1:3669438-3669457 | None:intergenic | 60.0% | |
| ACCATTGCCCTCAGGGCTCA+GGG | + | chr6.1:3669427-3669446 | MS.gene54678:intron | 60.0% | |
| ACCATTGCCCTGAGCCCTGA+GGG | - | chr6.1:3669437-3669456 | None:intergenic | 60.0% | |
| GGAGGAATCAGGCGGTTGGT+TGG | + | chr6.1:3669960-3669979 | MS.gene54678:CDS | 60.0% | |
| ! | AGGGGCTCGCACTGGTAATC+TGG | + | chr6.1:3668442-3668461 | MS.gene54678:intron | 60.0% |
| CGAGCCCCTTTGCTCGCTCT+CGG | - | chr6.1:3668431-3668450 | None:intergenic | 65.0% | |
| GCCCTCAGGGCTCAGGGCAA+TGG | + | chr6.1:3669433-3669452 | MS.gene54678:intron | 70.0% | |
| GCCCTGAGCCCTGAGGGCAA+TGG | - | chr6.1:3669431-3669450 | None:intergenic | 70.0% | |
| GCGAGCAAAGGGGCTCGCAC+TGG | + | chr6.1:3668434-3668453 | MS.gene54678:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 3668225 | 3671561 | 3668225 | ID=MS.gene54678 |
| chr6.1 | mRNA | 3668225 | 3671561 | 3668225 | ID=MS.gene54678.t1;Parent=MS.gene54678 |
| chr6.1 | exon | 3668225 | 3668263 | 3668225 | ID=MS.gene54678.t1.exon1;Parent=MS.gene54678.t1 |
| chr6.1 | CDS | 3668225 | 3668263 | 3668225 | ID=cds.MS.gene54678.t1;Parent=MS.gene54678.t1 |
| chr6.1 | exon | 3668945 | 3669253 | 3668945 | ID=MS.gene54678.t1.exon2;Parent=MS.gene54678.t1 |
| chr6.1 | CDS | 3668945 | 3669253 | 3668945 | ID=cds.MS.gene54678.t1;Parent=MS.gene54678.t1 |
| chr6.1 | exon | 3669775 | 3670179 | 3669775 | ID=MS.gene54678.t1.exon3;Parent=MS.gene54678.t1 |
| chr6.1 | CDS | 3669775 | 3670179 | 3669775 | ID=cds.MS.gene54678.t1;Parent=MS.gene54678.t1 |
| chr6.1 | exon | 3670923 | 3671561 | 3670923 | ID=MS.gene54678.t1.exon4;Parent=MS.gene54678.t1 |
| chr6.1 | CDS | 3670923 | 3671561 | 3670923 | ID=cds.MS.gene54678.t1;Parent=MS.gene54678.t1 |
| Gene Sequence |
| Protein sequence |
