Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54973.t1 | XP_003624459.1 | 99 | 194 | 2 | 0 | 1 | 194 | 1 | 194 | 6.70E-98 | 366.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54973.t1 | Q5E9E4 | 27.6 | 152 | 102 | 3 | 9 | 155 | 3 | 151 | 2.1e-07 | 57.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54973.t1 | G7KW77 | 99.0 | 194 | 2 | 0 | 1 | 194 | 1 | 194 | 4.8e-98 | 366.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057321 | MS.gene54973 | 0.810896 | 9.18E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54973.t1 | MTR_7g083560 | 98.969 | 194 | 2 | 0 | 1 | 194 | 1 | 194 | 8.85e-139 | 385 |
| MS.gene54973.t1 | MTR_7g083560 | 98.718 | 156 | 2 | 0 | 1 | 156 | 1 | 156 | 1.21e-110 | 313 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54973.t1 | AT5G14030 | 61.340 | 194 | 75 | 0 | 1 | 194 | 1 | 194 | 1.83e-87 | 256 |
| MS.gene54973.t1 | AT5G14030 | 61.340 | 194 | 75 | 0 | 1 | 194 | 1 | 194 | 1.83e-87 | 256 |
| MS.gene54973.t1 | AT5G14030 | 61.340 | 194 | 75 | 0 | 1 | 194 | 1 | 194 | 1.83e-87 | 256 |
| MS.gene54973.t1 | AT5G14030 | 61.340 | 194 | 75 | 0 | 1 | 194 | 1 | 194 | 1.83e-87 | 256 |
| MS.gene54973.t1 | AT5G14030 | 60.131 | 153 | 61 | 0 | 1 | 153 | 1 | 153 | 3.38e-67 | 203 |
Find 47 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCACAAGCGCTGCTTTAC+AGG | 0.172413 | 7.2:-23777364 | MS.gene54973:intron |
| AAGAACATCTAAAGGCAATA+TGG | 0.307778 | 7.2:+23777240 | None:intergenic |
| CAGAGGTTGCTGGCTAAATA+TGG | 0.310883 | 7.2:-23776524 | MS.gene54973:CDS |
| CTTTAGATGTTCTTGCTGAT+AGG | 0.329611 | 7.2:-23777231 | MS.gene54973:CDS |
| GCGATCAGAGGTTTGGAGAT+TGG | 0.355061 | 7.2:+23778701 | None:intergenic |
| TTTAGATGTTCTTGCTGATA+GGG | 0.402677 | 7.2:-23777230 | MS.gene54973:CDS |
| ACCTGTAAAGCAGCGCTTGT+GGG | 0.407421 | 7.2:+23777363 | None:intergenic |
| GAGAAATGCGATCAGAGGTT+TGG | 0.412182 | 7.2:+23778694 | None:intergenic |
| ACAAGAAAGCCTCTCTCAAC+AGG | 0.423346 | 7.2:-23778610 | MS.gene54973:CDS |
| TATCGTCATGTTTGTGTACC+TGG | 0.435000 | 7.2:-23776477 | MS.gene54973:CDS |
| CCATCAAAATCAGGTGCAAA+AGG | 0.443520 | 7.2:-23776446 | MS.gene54973:CDS |
| TTATTGTCTACAGAGGTTGC+TGG | 0.455750 | 7.2:-23776534 | MS.gene54973:intron |
| ACCCATTCAAACTTCTTCTC+AGG | 0.459459 | 7.2:+23777205 | None:intergenic |
| AGAACATCTAAAGGCAATAT+GGG | 0.469652 | 7.2:+23777241 | None:intergenic |
| TCGGAGCATACGAGGTTCCT+TGG | 0.476958 | 7.2:+23778540 | None:intergenic |
| AAATCAAAGGGAGTATTTGC+CGG | 0.480692 | 7.2:-23777414 | MS.gene54973:CDS |
| GTAGCTACACCATCAAAATC+AGG | 0.488741 | 7.2:-23776455 | MS.gene54973:CDS |
| TCTCTCAACAGGCTCAAGAC+TGG | 0.501376 | 7.2:-23778599 | MS.gene54973:CDS |
| CTCCTGAGAAGAAGTTTGAA+TGG | 0.504072 | 7.2:-23777207 | MS.gene54973:CDS |
| TTCTTGTGAGCGACGATGAA+GGG | 0.511874 | 7.2:+23778626 | None:intergenic |
| TACCACTGATAATACTGAAA+AGG | 0.512703 | 7.2:+23777610 | None:intergenic |
| TGAGTCTGTCAGATGATAGT+TGG | 0.515742 | 7.2:-23777641 | MS.gene54973:CDS |
| CTTGATGATAGCTGGTTCAC+CGG | 0.524499 | 7.2:+23777395 | None:intergenic |
| TCCTGAGAAGAAGTTTGAAT+GGG | 0.534458 | 7.2:-23777206 | MS.gene54973:intron |
| ACCATCGATATCTACAACCA+AGG | 0.538926 | 7.2:-23778557 | MS.gene54973:CDS |
| AACCTGTAAAGCAGCGCTTG+TGG | 0.546132 | 7.2:+23777362 | None:intergenic |
| ACACGGAACTTGATGATAGC+TGG | 0.546788 | 7.2:+23777387 | None:intergenic |
| TGAGCTCGAGGCAAAATCAA+AGG | 0.551590 | 7.2:-23777427 | MS.gene54973:CDS |
| TTTCTTGTGAGCGACGATGA+AGG | 0.554943 | 7.2:+23778625 | None:intergenic |
| CTATCAGCAAGAACATCTAA+AGG | 0.557091 | 7.2:+23777232 | None:intergenic |
| GAGCTCGAGGCAAAATCAAA+GGG | 0.557221 | 7.2:-23777426 | MS.gene54973:CDS |
| CGAGCTCAAATGTGTGGGAG+AGG | 0.559003 | 7.2:+23777442 | None:intergenic |
| TAAATATGGATCTCTAATCT+CGG | 0.562276 | 7.2:-23776510 | MS.gene54973:CDS |
| AGTCTTGAGCCTGTTGAGAG+AGG | 0.563739 | 7.2:+23778601 | None:intergenic |
| CTCCCACACATTTGAGCTCG+AGG | 0.571846 | 7.2:-23777439 | MS.gene54973:CDS |
| TTGCCTCGAGCTCAAATGTG+TGG | 0.575222 | 7.2:+23777436 | None:intergenic |
| CCTGTAAAGCAGCGCTTGTG+GGG | 0.580456 | 7.2:+23777364 | None:intergenic |
| TGCCTCGAGCTCAAATGTGT+GGG | 0.580862 | 7.2:+23777437 | None:intergenic |
| ATAGCAAGAAGGAAGCTATG+AGG | 0.592536 | 7.2:+23778672 | None:intergenic |
| TCTTGTGAGCGACGATGAAG+GGG | 0.596449 | 7.2:+23778627 | None:intergenic |
| AAGCAGCGCTTGTGGGGACA+CGG | 0.602130 | 7.2:+23777370 | None:intergenic |
| GTGGTACCACTTCAAAGACA+TGG | 0.604259 | 7.2:-23777593 | MS.gene54973:CDS |
| AGCTTGCGAGCATAGCAAGA+AGG | 0.606030 | 7.2:+23778661 | None:intergenic |
| AGCGACGATGAAGGGGACAT+CGG | 0.612166 | 7.2:+23778634 | None:intergenic |
| TCCTTGGTTGTAGATATCGA+TGG | 0.617158 | 7.2:+23778556 | None:intergenic |
| ATGAGGAGAAATGCGATCAG+AGG | 0.638340 | 7.2:+23778689 | None:intergenic |
| TGGTACCACTTCAAAGACAT+GGG | 0.663684 | 7.2:-23777592 | MS.gene54973:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCATGTATATTAATATT+TGG | - | chr7.2:23778028-23778047 | MS.gene54973:intron | 10.0% |
| !! | AAAAATAAAGATGAAGTTTA+GGG | + | chr7.2:23778380-23778399 | None:intergenic | 15.0% |
| !! | AAGTAAGACTATAAATTATA+AGG | + | chr7.2:23777331-23777350 | None:intergenic | 15.0% |
| !! | TAAAAATAAAGATGAAGTTT+AGG | + | chr7.2:23778381-23778400 | None:intergenic | 15.0% |
| !!! | AAAAACAACTTAAATTTTTG+TGG | - | chr7.2:23777385-23777404 | MS.gene54973:CDS | 15.0% |
| !!! | TTTTTCTTACTCTTTTTTAA+AGG | - | chr7.2:23777460-23777479 | MS.gene54973:intron | 15.0% |
| !! | AAATTGTTAAAGCGAATAAT+AGG | + | chr7.2:23777592-23777611 | None:intergenic | 20.0% |
| !! | ACATTGAAAATTAGGTAAAA+TGG | - | chr7.2:23776868-23776887 | MS.gene54973:intron | 20.0% |
| !! | ATATTAATATTTGGTTGGAT+TGG | - | chr7.2:23778037-23778056 | MS.gene54973:intron | 20.0% |
| !! | CATGTATATTAATATTTGGT+TGG | - | chr7.2:23778032-23778051 | MS.gene54973:intron | 20.0% |
| !! | TGAAAAGAAAAAACGATAAA+GGG | + | chr7.2:23776630-23776649 | None:intergenic | 20.0% |
| !! | TTGAAAAGAAAAAACGATAA+AGG | + | chr7.2:23776631-23776650 | None:intergenic | 20.0% |
| !!! | ACAATAACATTTTGACATTA+AGG | + | chr7.2:23778590-23778609 | None:intergenic | 20.0% |
| !!! | CAATAACATTTTGACATTAA+GGG | + | chr7.2:23778589-23778608 | None:intergenic | 20.0% |
| !!! | CTAAACTCAATTTTACATTT+TGG | + | chr7.2:23777213-23777232 | None:intergenic | 20.0% |
| !!! | GTTTTACTTGTTATAAGAAA+TGG | - | chr7.2:23777174-23777193 | MS.gene54973:intron | 20.0% |
| !!! | GTTTTTATATTCATGAGAAA+CGG | - | chr7.2:23778247-23778266 | MS.gene54973:intron | 20.0% |
| !!! | TTAGTTATTGACATTGATTA+TGG | - | chr7.2:23777229-23777248 | MS.gene54973:CDS | 20.0% |
| ! | AAAGCAACAAACAATTATGA+CGG | + | chr7.2:23777858-23777877 | None:intergenic | 25.0% |
| ! | ATAAAATTGAGTTTAGCATG+AGG | - | chr7.2:23778136-23778155 | MS.gene54973:intron | 25.0% |
| ! | GGAAAGAAATTATACTATGA+TGG | + | chr7.2:23778568-23778587 | None:intergenic | 25.0% |
| ! | TAAAATTGAGTTTAGCATGA+GGG | - | chr7.2:23778137-23778156 | MS.gene54973:intron | 25.0% |
| ! | TAAATATGGATCTCTAATCT+CGG | - | chr7.2:23778627-23778646 | MS.gene54973:CDS | 25.0% |
| ! | TACTAGTGACATTGAAAATT+AGG | - | chr7.2:23776860-23776879 | MS.gene54973:intron | 25.0% |
| ! | TATCAATTGCAAAACATAGA+AGG | + | chr7.2:23777429-23777448 | None:intergenic | 25.0% |
| ! | TGTTATAAGAAATGGTTTGA+GGG | - | chr7.2:23777182-23777201 | MS.gene54973:intron | 25.0% |
| ! | TTAAAAGTTTCTGTGTGATT+TGG | - | chr7.2:23777049-23777068 | MS.gene54973:intron | 25.0% |
| ! | TTGTTATAAGAAATGGTTTG+AGG | - | chr7.2:23777181-23777200 | MS.gene54973:intron | 25.0% |
| ! | TTGTTTACTTGACATTTACA+TGG | - | chr7.2:23777962-23777981 | MS.gene54973:intron | 25.0% |
| !! | CAATTTCGTATATGTTTCTA+TGG | - | chr7.2:23776751-23776770 | MS.gene54973:intron | 25.0% |
| !! | TATCTGATTTTGCTTGAATT+AGG | - | chr7.2:23776711-23776730 | MS.gene54973:intron | 25.0% |
| !! | TTATTGACATTGATTATGGT+AGG | - | chr7.2:23777233-23777252 | MS.gene54973:CDS | 25.0% |
| !! | TTTTGTGGTGTATTTTCATT+TGG | - | chr7.2:23777400-23777419 | MS.gene54973:CDS | 25.0% |
| !!! | CATAATTGTTTGTTGCTTTT+AGG | - | chr7.2:23777859-23777878 | MS.gene54973:intron | 25.0% |
| !!! | TCTTACTCTTTTTTAAAGGA+CGG | - | chr7.2:23777464-23777483 | MS.gene54973:intron | 25.0% |
| AACGATAAAGGGTTATAGAT+CGG | + | chr7.2:23776619-23776638 | None:intergenic | 30.0% | |
| AAGAACATCTAAAGGCAATA+TGG | + | chr7.2:23777900-23777919 | None:intergenic | 30.0% | |
| AAGCAACAAACAATTATGAC+GGG | + | chr7.2:23777857-23777876 | None:intergenic | 30.0% | |
| ACAAATCATATTGTTTGCAG+TGG | - | chr7.2:23777666-23777685 | MS.gene54973:intron | 30.0% | |
| AGAACATCTAAAGGCAATAT+GGG | + | chr7.2:23777899-23777918 | None:intergenic | 30.0% | |
| CAAAACACAGATGAAGTTTA+GGG | + | chr7.2:23778443-23778462 | None:intergenic | 30.0% | |
| CAAAATGTTATTGTCTACAG+AGG | - | chr7.2:23778596-23778615 | MS.gene54973:CDS | 30.0% | |
| GCAGTTAAAAAAACGAATCA+TGG | + | chr7.2:23778529-23778548 | None:intergenic | 30.0% | |
| GGTGTTTGCAAAGAAAAAAA+AGG | + | chr7.2:23778359-23778378 | None:intergenic | 30.0% | |
| TACCACTGATAATACTGAAA+AGG | + | chr7.2:23777530-23777549 | None:intergenic | 30.0% | |
| TATAGATGAGAAATCTTTGC+TGG | - | chr7.2:23776814-23776833 | MS.gene54973:intron | 30.0% | |
| TGTGGTGTTCAAATCATATA+TGG | + | chr7.2:23778412-23778431 | None:intergenic | 30.0% | |
| TTCACTCACTAGAAAGAAAA+CGG | + | chr7.2:23777828-23777847 | None:intergenic | 30.0% | |
| TTTAGATGTTCTTGCTGATA+GGG | - | chr7.2:23777907-23777926 | MS.gene54973:intron | 30.0% | |
| ! | TTGCTTGAATTAGGTTTTTG+AGG | - | chr7.2:23776720-23776739 | MS.gene54973:intron | 30.0% |
| !! | AGTACTGATGCGAAAAATAA+GGG | - | chr7.2:23778270-23778289 | MS.gene54973:intron | 30.0% |
| !! | CAGTTGATTTTGTAAGTTAC+CGG | - | chr7.2:23778173-23778192 | MS.gene54973:intron | 30.0% |
| !! | GCTTTACAGGTTTAATTTGT+TGG | - | chr7.2:23777786-23777805 | MS.gene54973:intron | 30.0% |
| !!! | AATTGTTTGTTGCTTTTAGG+AGG | - | chr7.2:23777862-23777881 | MS.gene54973:intron | 30.0% |
| !!! | TCGTTTTTTTAACTGCTTTC+TGG | - | chr7.2:23778533-23778552 | MS.gene54973:intron | 30.0% |
| !!! | TTCACTTTTAAAGCGAGAAT+TGG | - | chr7.2:23778323-23778342 | MS.gene54973:intron | 30.0% |
| AATCATATTGTTTGCAGTGG+CGG | - | chr7.2:23777669-23777688 | MS.gene54973:intron | 35.0% | |
| AATGGTTATCTTTGATCACG+TGG | - | chr7.2:23776886-23776905 | MS.gene54973:intron | 35.0% | |
| ACAAAATCAACTGCCGAAAT+AGG | + | chr7.2:23778166-23778185 | None:intergenic | 35.0% | |
| ATGCATGCAGATGAGAAAAT+TGG | + | chr7.2:23776671-23776690 | None:intergenic | 35.0% | |
| ATGGTTATCTTTGATCACGT+GGG | - | chr7.2:23776887-23776906 | MS.gene54973:intron | 35.0% | |
| ATTTCCTTGTGAAACCCATT+AGG | + | chr7.2:23778483-23778502 | None:intergenic | 35.0% | |
| CTATCAGCAAGAACATCTAA+AGG | + | chr7.2:23777908-23777927 | None:intergenic | 35.0% | |
| CTTTAGATGTTCTTGCTGAT+AGG | - | chr7.2:23777906-23777925 | MS.gene54973:intron | 35.0% | |
| GCAAAACACAGATGAAGTTT+AGG | + | chr7.2:23778444-23778463 | None:intergenic | 35.0% | |
| GGTGATACATGAACTTAATG+TGG | - | chr7.2:23777070-23777089 | MS.gene54973:intron | 35.0% | |
| TAAACAAAAATGCAGCAGAG+TGG | + | chr7.2:23777633-23777652 | None:intergenic | 35.0% | |
| TCCTGAGAAGAAGTTTGAAT+GGG | - | chr7.2:23777931-23777950 | MS.gene54973:intron | 35.0% | |
| TGCATGCAGATGAGAAAATT+GGG | + | chr7.2:23776670-23776689 | None:intergenic | 35.0% | |
| TGCATGCATTAGTAATTGGA+AGG | - | chr7.2:23776962-23776981 | MS.gene54973:intron | 35.0% | |
| TGCTTGCATGCATTAGTAAT+TGG | - | chr7.2:23776958-23776977 | MS.gene54973:intron | 35.0% | |
| ! | AAGTTTAGGGTGATCATTTG+TGG | + | chr7.2:23778430-23778449 | None:intergenic | 35.0% |
| ! | GACCTTTTCAGTATTATCAG+TGG | - | chr7.2:23777525-23777544 | MS.gene54973:intron | 35.0% |
| ! | TTTGGATGCTGATTAGATGT+TGG | - | chr7.2:23776791-23776810 | MS.gene54973:intron | 35.0% |
| !! | AAATCAAAGGGAGTATTTGC+CGG | - | chr7.2:23777723-23777742 | MS.gene54973:intron | 35.0% |
| !! | GAGTACTGATGCGAAAAATA+AGG | - | chr7.2:23778269-23778288 | MS.gene54973:intron | 35.0% |
| !! | TCTCATGTTCTGAGACAATT+GGG | + | chr7.2:23777298-23777317 | None:intergenic | 35.0% |
| ACCAACCTTTCTCTCCTAAT+GGG | - | chr7.2:23778466-23778485 | MS.gene54973:intron | 40.0% | |
| ACCATCGATATCTACAACCA+AGG | - | chr7.2:23776580-23776599 | MS.gene54973:intron | 40.0% | |
| ACCCATTCAAACTTCTTCTC+AGG | + | chr7.2:23777935-23777954 | None:intergenic | 40.0% | |
| AGCAATATGTCAGTCAATGC+AGG | + | chr7.2:23778002-23778021 | None:intergenic | 40.0% | |
| ATAGCAAGAAGGAAGCTATG+AGG | + | chr7.2:23776468-23776487 | None:intergenic | 40.0% | |
| ATGGAGAAGATCTTAAGCTG+TGG | + | chr7.2:23778510-23778529 | None:intergenic | 40.0% | |
| CAATTGTCTCAGAACATGAG+AGG | - | chr7.2:23777297-23777316 | MS.gene54973:intron | 40.0% | |
| CATGATGACTAGGACAAAGT+GGG | - | chr7.2:23778201-23778220 | MS.gene54973:intron | 40.0% | |
| CCATCAAAATCAGGTGCAAA+AGG | - | chr7.2:23778691-23778710 | MS.gene54973:CDS | 40.0% | |
| CTCCTGAGAAGAAGTTTGAA+TGG | - | chr7.2:23777930-23777949 | MS.gene54973:intron | 40.0% | |
| GATCTTGTTGAGAAGAGATG+TGG | - | chr7.2:23777024-23777043 | MS.gene54973:intron | 40.0% | |
| GCGAAAAATAAGGGTCTGTT+TGG | - | chr7.2:23778279-23778298 | MS.gene54973:intron | 40.0% | |
| GTAGCTACACCATCAAAATC+AGG | - | chr7.2:23778682-23778701 | MS.gene54973:CDS | 40.0% | |
| GTTGCTGTGTTTATGCTGTT+TGG | - | chr7.2:23776773-23776792 | MS.gene54973:intron | 40.0% | |
| TACCAACCTTTCTCTCCTAA+TGG | - | chr7.2:23778465-23778484 | MS.gene54973:intron | 40.0% | |
| TATCGTCATGTTTGTGTACC+TGG | - | chr7.2:23778660-23778679 | MS.gene54973:CDS | 40.0% | |
| TATGGTAGGCTAGTAGATGA+GGG | - | chr7.2:23777247-23777266 | MS.gene54973:CDS | 40.0% | |
| TCCTTGGTTGTAGATATCGA+TGG | + | chr7.2:23776584-23776603 | None:intergenic | 40.0% | |
| TGAAACCCATTAGGAGAGAA+AGG | + | chr7.2:23778474-23778493 | None:intergenic | 40.0% | |
| TGAGTCTGTCAGATGATAGT+TGG | - | chr7.2:23777496-23777515 | MS.gene54973:intron | 40.0% | |
| TGGTACCACTTCAAAGACAT+GGG | - | chr7.2:23777545-23777564 | MS.gene54973:intron | 40.0% | |
| TTATGGTAGGCTAGTAGATG+AGG | - | chr7.2:23777246-23777265 | MS.gene54973:CDS | 40.0% | |
| TTATTGTCTACAGAGGTTGC+TGG | - | chr7.2:23778603-23778622 | MS.gene54973:CDS | 40.0% | |
| ! | ATAAGGGTCTGTTTGGTTTC+AGG | - | chr7.2:23778286-23778305 | MS.gene54973:intron | 40.0% |
| ! | CCTTTTGCACCTGATTTTGA+TGG | + | chr7.2:23778694-23778713 | None:intergenic | 40.0% |
| !! | CTCTCATGTTCTGAGACAAT+TGG | + | chr7.2:23777299-23777318 | None:intergenic | 40.0% |
| !! | CTTTTCCCATGTCTTTGAAG+TGG | + | chr7.2:23777553-23777572 | None:intergenic | 40.0% |
| !!! | ATTTTGATGGTGTAGCTACC+AGG | + | chr7.2:23778681-23778700 | None:intergenic | 40.0% |
| ACAAGAAAGCCTCTCTCAAC+AGG | - | chr7.2:23776527-23776546 | MS.gene54973:intron | 45.0% | |
| ACCCATTAGGAGAGAAAGGT+TGG | + | chr7.2:23778470-23778489 | None:intergenic | 45.0% | |
| ATGAGGAGAAATGCGATCAG+AGG | + | chr7.2:23776451-23776470 | None:intergenic | 45.0% | |
| CTACCTCTGATTTCACATGC+AGG | - | chr7.2:23777118-23777137 | MS.gene54973:intron | 45.0% | |
| GAGAAATGCGATCAGAGGTT+TGG | + | chr7.2:23776446-23776465 | None:intergenic | 45.0% | |
| GAGCTCGAGGCAAAATCAAA+GGG | - | chr7.2:23777711-23777730 | MS.gene54973:intron | 45.0% | |
| GCAGAGTGGTAATTGAAGAG+TGG | + | chr7.2:23777619-23777638 | None:intergenic | 45.0% | |
| GCATGATGACTAGGACAAAG+TGG | - | chr7.2:23778200-23778219 | MS.gene54973:intron | 45.0% | |
| GTGGTACCACTTCAAAGACA+TGG | - | chr7.2:23777544-23777563 | MS.gene54973:intron | 45.0% | |
| GTTATAGATCGGAGCATACG+AGG | + | chr7.2:23776608-23776627 | None:intergenic | 45.0% | |
| TCCTAGTCATCATGCTTGAC+CGG | + | chr7.2:23778195-23778214 | None:intergenic | 45.0% | |
| TGAGCTCGAGGCAAAATCAA+AGG | - | chr7.2:23777710-23777729 | MS.gene54973:intron | 45.0% | |
| TTCTTGTGAGCGACGATGAA+GGG | + | chr7.2:23776514-23776533 | None:intergenic | 45.0% | |
| TTTCTTGTGAGCGACGATGA+AGG | + | chr7.2:23776515-23776534 | None:intergenic | 45.0% | |
| ! | ACACGGAACTTGATGATAGC+TGG | + | chr7.2:23777753-23777772 | None:intergenic | 45.0% |
| ! | CAGAGGTTGCTGGCTAAATA+TGG | - | chr7.2:23778613-23778632 | MS.gene54973:CDS | 45.0% |
| ! | CTTGATGATAGCTGGTTCAC+CGG | + | chr7.2:23777745-23777764 | None:intergenic | 45.0% |
| !! | CTCTCCTAATGGGTTTCACA+AGG | - | chr7.2:23778476-23778495 | MS.gene54973:intron | 45.0% |
| AACCTGTAAAGCAGCGCTTG+TGG | + | chr7.2:23777778-23777797 | None:intergenic | 50.0% | |
| ACCGGTCAAGCATGATGACT+AGG | - | chr7.2:23778191-23778210 | MS.gene54973:intron | 50.0% | |
| ACCTGTAAAGCAGCGCTTGT+GGG | + | chr7.2:23777777-23777796 | None:intergenic | 50.0% | |
| AGCATGAGGGCTGCCTATTT+CGG | - | chr7.2:23778150-23778169 | MS.gene54973:intron | 50.0% | |
| AGCTTGCGAGCATAGCAAGA+AGG | + | chr7.2:23776479-23776498 | None:intergenic | 50.0% | |
| AGTCTTGAGCCTGTTGAGAG+AGG | + | chr7.2:23776539-23776558 | None:intergenic | 50.0% | |
| GCGATCAGAGGTTTGGAGAT+TGG | + | chr7.2:23776439-23776458 | None:intergenic | 50.0% | |
| TCGCCTGCATGTGAAATCAG+AGG | + | chr7.2:23777124-23777143 | None:intergenic | 50.0% | |
| TCTCTCAACAGGCTCAAGAC+TGG | - | chr7.2:23776538-23776557 | MS.gene54973:intron | 50.0% | |
| TCTTGTGAGCGACGATGAAG+GGG | + | chr7.2:23776513-23776532 | None:intergenic | 50.0% | |
| TGCCTCGAGCTCAAATGTGT+GGG | + | chr7.2:23777703-23777722 | None:intergenic | 50.0% | |
| TTGCCTCGAGCTCAAATGTG+TGG | + | chr7.2:23777704-23777723 | None:intergenic | 50.0% | |
| !! | TTGGTTGGATTGGCTTTCGC+AGG | - | chr7.2:23778047-23778066 | MS.gene54973:intron | 50.0% |
| AGCGACGATGAAGGGGACAT+CGG | + | chr7.2:23776506-23776525 | None:intergenic | 55.0% | |
| CCTGTAAAGCAGCGCTTGTG+GGG | + | chr7.2:23777776-23777795 | None:intergenic | 55.0% | |
| CGAGCTCAAATGTGTGGGAG+AGG | + | chr7.2:23777698-23777717 | None:intergenic | 55.0% | |
| CTCCCACACATTTGAGCTCG+AGG | - | chr7.2:23777698-23777717 | MS.gene54973:intron | 55.0% | |
| GGCTTTCGCAGGCTAAGGTA+TGG | - | chr7.2:23778058-23778077 | MS.gene54973:intron | 55.0% | |
| TCGGAGCATACGAGGTTCCT+TGG | + | chr7.2:23776600-23776619 | None:intergenic | 55.0% | |
| !! | GGATTGGCTTTCGCAGGCTA+AGG | - | chr7.2:23778053-23778072 | MS.gene54973:intron | 55.0% |
| AAGCAGCGCTTGTGGGGACA+CGG | + | chr7.2:23777770-23777789 | None:intergenic | 60.0% | |
| ! | CCCCACAAGCGCTGCTTTAC+AGG | - | chr7.2:23777773-23777792 | MS.gene54973:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 23776427 | 23778732 | 23776427 | ID=MS.gene54973 |
| chr7.2 | mRNA | 23776427 | 23778732 | 23776427 | ID=MS.gene54973.t1;Parent=MS.gene54973 |
| chr7.2 | exon | 23778551 | 23778732 | 23778551 | ID=MS.gene54973.t1.exon1;Parent=MS.gene54973.t1 |
| chr7.2 | CDS | 23778551 | 23778732 | 23778551 | ID=cds.MS.gene54973.t1;Parent=MS.gene54973.t1 |
| chr7.2 | exon | 23777579 | 23777677 | 23777579 | ID=MS.gene54973.t1.exon2;Parent=MS.gene54973.t1 |
| chr7.2 | CDS | 23777579 | 23777677 | 23777579 | ID=cds.MS.gene54973.t1;Parent=MS.gene54973.t1 |
| chr7.2 | exon | 23777365 | 23777473 | 23777365 | ID=MS.gene54973.t1.exon3;Parent=MS.gene54973.t1 |
| chr7.2 | CDS | 23777365 | 23777473 | 23777365 | ID=cds.MS.gene54973.t1;Parent=MS.gene54973.t1 |
| chr7.2 | exon | 23777207 | 23777278 | 23777207 | ID=MS.gene54973.t1.exon4;Parent=MS.gene54973.t1 |
| chr7.2 | CDS | 23777207 | 23777278 | 23777207 | ID=cds.MS.gene54973.t1;Parent=MS.gene54973.t1 |
| chr7.2 | exon | 23777085 | 23777090 | 23777085 | ID=MS.gene54973.t1.exon5;Parent=MS.gene54973.t1 |
| chr7.2 | CDS | 23777085 | 23777090 | 23777085 | ID=cds.MS.gene54973.t1;Parent=MS.gene54973.t1 |
| chr7.2 | exon | 23776427 | 23776543 | 23776427 | ID=MS.gene54973.t1.exon6;Parent=MS.gene54973.t1 |
| chr7.2 | CDS | 23776427 | 23776543 | 23776427 | ID=cds.MS.gene54973.t1;Parent=MS.gene54973.t1 |
| Gene Sequence |
| Protein sequence |
