Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057321.t1 | XP_003600862.1 | 98.3 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 6.70E-155 | 556.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057321.t1 | O04202 | 75.6 | 291 | 67 | 1 | 2 | 288 | 3 | 293 | 8.7e-127 | 454.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057321.t1 | B7FK44 | 98.3 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 4.9e-155 | 556.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049306 | MS.gene057321 | 0.867297 | 1.52E-65 | -1.69E-46 |
| MS.gene049376 | MS.gene057321 | 0.81419 | 1.75E-51 | -1.69E-46 |
| MS.gene049387 | MS.gene057321 | 0.824176 | 9.30E-54 | -1.69E-46 |
| MS.gene051925 | MS.gene057321 | 0.838793 | 2.33E-57 | -1.69E-46 |
| MS.gene051927 | MS.gene057321 | 0.81656 | 5.19E-52 | -1.69E-46 |
| MS.gene052666 | MS.gene057321 | 0.855535 | 5.91E-62 | -1.69E-46 |
| MS.gene057321 | MS.gene058420 | -0.814047 | 1.88E-51 | -1.69E-46 |
| MS.gene057321 | MS.gene059340 | 0.846393 | 2.23E-59 | -1.69E-46 |
| MS.gene057321 | MS.gene060483 | 0.862548 | 4.69E-64 | -1.69E-46 |
| MS.gene057321 | MS.gene06169 | 0.830291 | 3.19E-55 | -1.69E-46 |
| MS.gene057321 | MS.gene06433 | 0.888321 | 6.55E-73 | -1.69E-46 |
| MS.gene057321 | MS.gene06617 | 0.808816 | 2.57E-50 | -1.69E-46 |
| MS.gene057321 | MS.gene067331 | 0.889374 | 2.56E-73 | -1.69E-46 |
| MS.gene057321 | MS.gene067471 | -0.818127 | 2.31E-52 | -1.69E-46 |
| MS.gene057321 | MS.gene06833 | 0.81061 | 1.06E-50 | -1.69E-46 |
| MS.gene057321 | MS.gene06923 | -0.801039 | 1.09E-48 | -1.69E-46 |
| MS.gene057321 | MS.gene06999 | 0.847889 | 8.69E-60 | -1.69E-46 |
| MS.gene057321 | MS.gene072093 | 0.804385 | 2.22E-49 | -1.69E-46 |
| MS.gene057321 | MS.gene072847 | -0.810622 | 1.05E-50 | -1.69E-46 |
| MS.gene057321 | MS.gene073358 | 0.838179 | 3.35E-57 | -1.69E-46 |
| MS.gene057321 | MS.gene074400 | 0.863336 | 2.68E-64 | -1.69E-46 |
| MS.gene057321 | MS.gene08521 | 0.851099 | 1.11E-60 | -1.69E-46 |
| MS.gene057321 | MS.gene08636 | 0.818614 | 1.79E-52 | -1.69E-46 |
| MS.gene057321 | MS.gene08869 | 0.838579 | 2.64E-57 | -1.69E-46 |
| MS.gene057321 | MS.gene09038 | 0.808623 | 2.83E-50 | -1.69E-46 |
| MS.gene057321 | MS.gene09204 | 0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene057321 | MS.gene25236 | 0.843509 | 1.34E-58 | -1.69E-46 |
| MS.gene057321 | MS.gene25240 | 0.849424 | 3.26E-60 | -1.69E-46 |
| MS.gene057321 | MS.gene25639 | 0.842708 | 2.19E-58 | -1.69E-46 |
| MS.gene057321 | MS.gene25649 | 0.842184 | 3.02E-58 | -1.69E-46 |
| MS.gene057321 | MS.gene25903 | 0.851829 | 6.88E-61 | -1.69E-46 |
| MS.gene057321 | MS.gene26343 | 0.823456 | 1.37E-53 | -1.69E-46 |
| MS.gene057321 | MS.gene26623 | -0.804654 | 1.95E-49 | -1.69E-46 |
| MS.gene057321 | MS.gene26792 | 0.890989 | 5.98E-74 | -1.69E-46 |
| MS.gene057321 | MS.gene27265 | 0.82052 | 6.57E-53 | -1.69E-46 |
| MS.gene057321 | MS.gene30990 | 0.892999 | 9.45E-75 | -1.69E-46 |
| MS.gene057321 | MS.gene31056 | 0.857903 | 1.19E-62 | -1.69E-46 |
| MS.gene057321 | MS.gene32677 | -0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene057321 | MS.gene36309 | -0.813921 | 2.00E-51 | -1.69E-46 |
| MS.gene057321 | MS.gene40321 | 0.864966 | 8.31E-65 | -1.69E-46 |
| MS.gene057321 | MS.gene43038 | 0.837101 | 6.34E-57 | -1.69E-46 |
| MS.gene057321 | MS.gene43112 | 0.811155 | 8.07E-51 | -1.69E-46 |
| MS.gene057321 | MS.gene47820 | -0.839901 | 1.20E-57 | -1.69E-46 |
| MS.gene057321 | MS.gene47821 | -0.839613 | 1.43E-57 | -1.69E-46 |
| MS.gene057321 | MS.gene47843 | -0.843766 | 1.15E-58 | -1.69E-46 |
| MS.gene057321 | MS.gene48336 | -0.832111 | 1.14E-55 | -1.69E-46 |
| MS.gene057321 | MS.gene50640 | 0.811869 | 5.64E-51 | -1.69E-46 |
| MS.gene057321 | MS.gene54973 | 0.810896 | 9.18E-51 | -1.69E-46 |
| MS.gene057321 | MS.gene55619 | 0.802193 | 6.30E-49 | -1.69E-46 |
| MS.gene057321 | MS.gene55890 | 0.820949 | 5.23E-53 | -1.69E-46 |
| MS.gene057321 | MS.gene58173 | 0.856841 | 2.45E-62 | -1.69E-46 |
| MS.gene057321 | MS.gene59457 | 0.801821 | 7.52E-49 | -1.69E-46 |
| MS.gene057321 | MS.gene61653 | -0.82399 | 1.03E-53 | -1.69E-46 |
| MS.gene057321 | MS.gene62426 | 0.808549 | 2.93E-50 | -1.69E-46 |
| MS.gene057321 | MS.gene62620 | 0.823511 | 1.33E-53 | -1.69E-46 |
| MS.gene057321 | MS.gene66210 | -0.825743 | 3.97E-54 | -1.69E-46 |
| MS.gene057321 | MS.gene66653 | -0.828831 | 7.23E-55 | -1.69E-46 |
| MS.gene057321 | MS.gene70316 | 0.83536 | 1.76E-56 | -1.69E-46 |
| MS.gene057321 | MS.gene70579 | 0.850961 | 1.21E-60 | -1.69E-46 |
| MS.gene057321 | MS.gene70808 | 0.80078 | 1.23E-48 | -1.69E-46 |
| MS.gene057321 | MS.gene75309 | 0.842334 | 2.76E-58 | -1.69E-46 |
| MS.gene057321 | MS.gene76490 | -0.823487 | 1.35E-53 | -1.69E-46 |
| MS.gene057321 | MS.gene77580 | 0.813746 | 2.19E-51 | -1.69E-46 |
| MS.gene057321 | MS.gene79721 | 0.825606 | 4.28E-54 | -1.69E-46 |
| MS.gene057321 | MS.gene80210 | -0.838831 | 2.28E-57 | -1.69E-46 |
| MS.gene057321 | MS.gene80889 | 0.818224 | 2.19E-52 | -1.69E-46 |
| MS.gene057321 | MS.gene82009 | 0.869683 | 2.58E-66 | -1.69E-46 |
| MS.gene057321 | MS.gene82103 | 0.804345 | 2.26E-49 | -1.69E-46 |
| MS.gene057321 | MS.gene83062 | 0.820627 | 6.21E-53 | -1.69E-46 |
| MS.gene057321 | MS.gene88918 | 0.828718 | 7.69E-55 | -1.69E-46 |
| MS.gene057321 | MS.gene92142 | 0.878825 | 2.05E-69 | -1.69E-46 |
| MS.gene057321 | MS.gene93325 | 0.834792 | 2.44E-56 | -1.69E-46 |
| MS.gene057321 | MS.gene93613 | 0.826282 | 2.96E-54 | -1.69E-46 |
| MS.gene057321 | MS.gene94930 | 0.861545 | 9.51E-64 | -1.69E-46 |
| MS.gene057321 | MS.gene96194 | 0.834038 | 3.78E-56 | -1.69E-46 |
| MS.gene057321 | MS.gene98978 | 0.825095 | 5.65E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69251 | MS.gene057321 | PPI |
| MS.gene29607 | MS.gene057321 | PPI |
| MS.gene057321 | MS.gene37293 | PPI |
| MS.gene42526 | MS.gene057321 | PPI |
| MS.gene018309 | MS.gene057321 | PPI |
| MS.gene057321 | MS.gene014112 | PPI |
| MS.gene56675 | MS.gene057321 | PPI |
| MS.gene017884 | MS.gene057321 | PPI |
| MS.gene057321 | MS.gene80661 | PPI |
| MS.gene057321 | MS.gene86150 | PPI |
| MS.gene008081 | MS.gene057321 | PPI |
| MS.gene057320 | MS.gene057321 | PPI |
| MS.gene018310 | MS.gene057321 | PPI |
| MS.gene39043 | MS.gene057321 | PPI |
| MS.gene057321 | MS.gene80790 | PPI |
| MS.gene031999 | MS.gene057321 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057321.t1 | MTR_3g070190 | 98.264 | 288 | 5 | 0 | 1 | 288 | 1 | 288 | 0.0 | 582 |
| MS.gene057321.t1 | MTR_5g082000 | 88.542 | 288 | 29 | 1 | 1 | 288 | 1 | 284 | 0.0 | 518 |
| MS.gene057321.t1 | MTR_3g070180 | 32.740 | 281 | 171 | 7 | 17 | 283 | 10 | 286 | 9.94e-34 | 125 |
| MS.gene057321.t1 | MTR_5g081980 | 32.472 | 271 | 166 | 6 | 25 | 282 | 19 | 285 | 1.81e-33 | 124 |
| MS.gene057321.t1 | MTR_5g082010 | 39.310 | 145 | 30 | 4 | 77 | 221 | 8 | 94 | 1.13e-18 | 79.7 |
| MS.gene057321.t1 | MTR_3g009270 | 23.856 | 306 | 195 | 6 | 14 | 284 | 2 | 304 | 6.83e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057321.t1 | AT2G39990 | 75.601 | 291 | 67 | 1 | 2 | 288 | 3 | 293 | 1.50e-159 | 446 |
| MS.gene057321.t1 | AT3G11270 | 32.624 | 282 | 170 | 7 | 17 | 282 | 5 | 282 | 1.42e-35 | 130 |
| MS.gene057321.t1 | AT3G11270 | 32.281 | 285 | 170 | 7 | 17 | 282 | 5 | 285 | 4.34e-35 | 129 |
| MS.gene057321.t1 | AT5G05780 | 31.206 | 282 | 174 | 7 | 17 | 282 | 5 | 282 | 9.28e-33 | 122 |
| MS.gene057321.t1 | AT5G05780 | 30.877 | 285 | 174 | 7 | 17 | 282 | 5 | 285 | 2.87e-32 | 121 |
| MS.gene057321.t1 | AT4G26430 | 24.342 | 304 | 191 | 7 | 16 | 284 | 4 | 303 | 2.87e-13 | 69.3 |
| MS.gene057321.t1 | AT5G56280 | 24.752 | 303 | 191 | 7 | 16 | 284 | 4 | 303 | 1.16e-12 | 67.4 |
Find 61 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGTCATTGGAACGCTTCT+TGG | 0.203406 | 3.1:-57556197 | MS.gene057321:CDS |
| GTTGCACCAGACAACAAAAT+TGG | 0.229921 | 3.1:-57551614 | MS.gene057321:CDS |
| ACAGTCAGAATTACAAAATC+TGG | 0.275877 | 3.1:+57551258 | None:intergenic |
| TGTCAACAGTGGTTGCCTTT+AGG | 0.305583 | 3.1:+57551809 | None:intergenic |
| GTTTGACACATAAGCTTTGA+TGG | 0.319915 | 3.1:+57552547 | None:intergenic |
| GCTTGTGAACGACAGCTTAC+AGG | 0.343421 | 3.1:-57551531 | MS.gene057321:intron |
| TCAACTGGACTTGGAGTAAC+TGG | 0.372693 | 3.1:-57552662 | MS.gene057321:CDS |
| CTTGGATATGTTCTTCCTGA+TGG | 0.373338 | 3.1:-57556179 | MS.gene057321:CDS |
| GTGTCAAACAATTTATCTCT+TGG | 0.383210 | 3.1:-57552533 | MS.gene057321:CDS |
| TATTTATGCAGGTATTCAAC+TGG | 0.393038 | 3.1:-57552677 | MS.gene057321:intron |
| ATTCATTTGACTGTTGATAC+AGG | 0.396286 | 3.1:-57552590 | MS.gene057321:CDS |
| GATCAAGCTGAACGCGTCAT+TGG | 0.409335 | 3.1:-57556209 | MS.gene057321:CDS |
| AACAGTCAAATGAATGGGAT+TGG | 0.410536 | 3.1:+57552598 | None:intergenic |
| TGCAGGTATTCAACTGGACT+TGG | 0.422441 | 3.1:-57552671 | MS.gene057321:intron |
| AAAATCCCCTCTGACTTAGA+AGG | 0.446924 | 3.1:-57551787 | MS.gene057321:CDS |
| AGAAGGCATGGAAGCATCAA+TGG | 0.461890 | 3.1:-57551770 | MS.gene057321:CDS |
| AATCAAAAGGAAGTCATAGT+TGG | 0.465079 | 3.1:-57553159 | MS.gene057321:CDS |
| TCACAATGAATCCGTTGATC+AGG | 0.465189 | 3.1:-57556123 | MS.gene057321:intron |
| TGTATCAACAGTCAAATGAA+TGG | 0.465420 | 3.1:+57552592 | None:intergenic |
| GACGAGAGGGTGAACCTTAG+CGG | 0.479471 | 3.1:+57556268 | None:intergenic |
| TTGCACCAGACAACAAAATT+GGG | 0.482472 | 3.1:-57551613 | MS.gene057321:CDS |
| ATGGTTGAAGCTGAGCGAAT+TGG | 0.484794 | 3.1:-57552461 | MS.gene057321:CDS |
| GAGGAACAGCATATGAATTA+CGG | 0.486958 | 3.1:+57556144 | None:intergenic |
| ACAATTTATCTCTTGGAGAC+AGG | 0.488454 | 3.1:-57552526 | MS.gene057321:CDS |
| ACAGTCAAATGAATGGGATT+GGG | 0.491042 | 3.1:+57552599 | None:intergenic |
| TTCTCAGAGCTTATCCGCTA+AGG | 0.495822 | 3.1:-57556282 | MS.gene057321:CDS |
| GTATCAACAGTCAAATGAAT+GGG | 0.496605 | 3.1:+57552593 | None:intergenic |
| CGGATATCAACAGTTCCATC+AGG | 0.497957 | 3.1:+57556164 | None:intergenic |
| CCCCTCTGACTTAGAAGGCA+TGG | 0.501688 | 3.1:-57551782 | MS.gene057321:CDS |
| GTTGATACAGGATTCACAAC+TGG | 0.502330 | 3.1:-57552578 | MS.gene057321:CDS |
| ATGACGCGTTCAGCTTGATC+AGG | 0.505348 | 3.1:+57556212 | None:intergenic |
| CACAAGAACTCAACTTAGCT+TGG | 0.506158 | 3.1:-57551303 | MS.gene057321:CDS |
| ACAAGCTTATCAAAATCAGA+TGG | 0.513873 | 3.1:+57551548 | None:intergenic |
| CAAGCTTATCAAAATCAGAT+GGG | 0.536179 | 3.1:+57551549 | None:intergenic |
| AATTCCACTGGATCTTCGTA+TGG | 0.540296 | 3.1:-57552480 | MS.gene057321:CDS |
| CTTCTCGAGAATAAAACTCA+TGG | 0.540683 | 3.1:+57552624 | None:intergenic |
| CAGTCAGAATTACAAAATCT+GGG | 0.544157 | 3.1:+57551259 | None:intergenic |
| GTTTCAGGATCACTTGCTCA+TGG | 0.545819 | 3.1:-57551342 | MS.gene057321:intron |
| AATGTCAGTTGATATCCTAA+AGG | 0.558985 | 3.1:-57551824 | MS.gene057321:intron |
| GGGACAACAACATATTATGA+TGG | 0.564682 | 3.1:+57553193 | None:intergenic |
| GAATTGCAACACTGTGCGAT+TGG | 0.579767 | 3.1:+57556322 | None:intergenic |
| TCCATGCCTTCTAAGTCAGA+GGG | 0.582710 | 3.1:+57551781 | None:intergenic |
| CAAATATGTTGATGATGTTG+TGG | 0.594015 | 3.1:-57551716 | MS.gene057321:intron |
| AAAAGGAAGTCATAGTTGGA+TGG | 0.597430 | 3.1:-57553155 | MS.gene057321:intron |
| AGCGGATAAGCTCTGAGAAG+AGG | 0.597938 | 3.1:+57556286 | None:intergenic |
| TTCCATGCCTTCTAAGTCAG+AGG | 0.599344 | 3.1:+57551780 | None:intergenic |
| CGAGGGAAGGACCTGATCAA+CGG | 0.606460 | 3.1:+57556112 | None:intergenic |
| ACAGGATTCACAACTGGAGG+GGG | 0.607665 | 3.1:-57552572 | MS.gene057321:CDS |
| AAATTTATATCAGATGCAGT+AGG | 0.618068 | 3.1:-57551590 | MS.gene057321:CDS |
| GATACAGGATTCACAACTGG+AGG | 0.619089 | 3.1:-57552575 | MS.gene057321:CDS |
| ACTGGACTTGGAGTAACTGG+TGG | 0.625290 | 3.1:-57552659 | MS.gene057321:CDS |
| TGATCAACGGATTCATTGTG+AGG | 0.630205 | 3.1:+57556125 | None:intergenic |
| TACAGGATTCACAACTGGAG+GGG | 0.630808 | 3.1:-57552573 | MS.gene057321:CDS |
| ACAGTTTCAAGAAATTCCAC+TGG | 0.631890 | 3.1:-57552492 | MS.gene057321:CDS |
| AAGCTTATCAAAATCAGATG+GGG | 0.633795 | 3.1:+57551550 | None:intergenic |
| AGATGTTGAATACGACGAGA+GGG | 0.638478 | 3.1:+57556255 | None:intergenic |
| ATACAGGATTCACAACTGGA+GGG | 0.659687 | 3.1:-57552574 | MS.gene057321:CDS |
| CAGATGTTGAATACGACGAG+AGG | 0.662433 | 3.1:+57556254 | None:intergenic |
| AGCTTATCAAAATCAGATGG+GGG | 0.668310 | 3.1:+57551551 | None:intergenic |
| CCATGCCTTCTAAGTCAGAG+GGG | 0.694607 | 3.1:+57551782 | None:intergenic |
| TCAACCATACGAAGATCCAG+TGG | 0.695781 | 3.1:+57552476 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCATTAAAAATCAATATT+TGG | + | chr3.1:57555730-57555749 | None:intergenic | 10.0% |
| !! | TTTGTGAAAATATTAAATTA+AGG | - | chr3.1:57555699-57555718 | MS.gene057321:intron | 10.0% |
| !!! | TTGTATTGATAAAAAAAAAT+AGG | - | chr3.1:57552795-57552814 | MS.gene057321:intron | 10.0% |
| !!! | TTTTAAATGAAAGAAAAAAA+TGG | + | chr3.1:57553658-57553677 | None:intergenic | 10.0% |
| !! | TAATAGATTTATTTATGTCT+TGG | - | chr3.1:57552724-57552743 | MS.gene057321:intron | 15.0% |
| !! | TGGTTAATATTAATATGAAA+TGG | - | chr3.1:57554723-57554742 | MS.gene057321:intron | 15.0% |
| !!! | TTTGCTTATTGTTTTTAAAA+CGG | - | chr3.1:57553724-57553743 | MS.gene057321:intron | 15.0% |
| !! | AAAGTAAATACTTATCTCAT+CGG | - | chr3.1:57552409-57552428 | MS.gene057321:intron | 20.0% |
| !! | AAATAATCAAAGTTTACACA+AGG | + | chr3.1:57554908-57554927 | None:intergenic | 20.0% |
| !! | AATAATCAAAGTTTACACAA+GGG | + | chr3.1:57554907-57554926 | None:intergenic | 20.0% |
| !! | ATATTAATATACAAATGGAC+TGG | - | chr3.1:57554813-57554832 | MS.gene057321:intron | 20.0% |
| !! | ATCACATATTAAAATGTAGA+TGG | + | chr3.1:57551517-57551536 | None:intergenic | 20.0% |
| !! | GAAGGAAAAAAAATTATTAC+AGG | + | chr3.1:57552648-57552667 | None:intergenic | 20.0% |
| !! | GTTGTATTTATAGATATGAT+AGG | - | chr3.1:57551652-57551671 | MS.gene057321:intron | 20.0% |
| !! | GTTTATTGATATCTAATTAG+AGG | - | chr3.1:57554047-57554066 | MS.gene057321:intron | 20.0% |
| !! | TAAACTTTGATTATTTATGC+AGG | - | chr3.1:57554912-57554931 | MS.gene057321:intron | 20.0% |
| !! | TATAAGAGAAACTATTAAGA+AGG | - | chr3.1:57553115-57553134 | MS.gene057321:intron | 20.0% |
| !! | TATTTATAGATATGATAGGA+GGG | - | chr3.1:57551656-57551675 | MS.gene057321:intron | 20.0% |
| !! | TGGTTAATATTAATACGAAA+TGG | - | chr3.1:57554765-57554784 | MS.gene057321:intron | 20.0% |
| !!! | AAAAGCTAAGACTTTAAAAT+AGG | + | chr3.1:57555312-57555331 | None:intergenic | 20.0% |
| !!! | ATAATTGTGAACTTTTTGTT+TGG | - | chr3.1:57551610-57551629 | MS.gene057321:CDS | 20.0% |
| !!! | ATTGAATTTTTGTCTAGATA+AGG | - | chr3.1:57552529-57552548 | MS.gene057321:CDS | 20.0% |
| !!! | CATTTGTTTTATATACCAAT+GGG | + | chr3.1:57554683-57554702 | None:intergenic | 20.0% |
| !!! | CTTAGCTTTTAATTATGTAA+TGG | - | chr3.1:57555322-57555341 | MS.gene057321:intron | 20.0% |
| !!! | GGTTGATATTAATATACAAA+TGG | - | chr3.1:57554808-57554827 | MS.gene057321:intron | 20.0% |
| !!! | TAGTTGAAATTTTAACAGAA+TGG | + | chr3.1:57551792-57551811 | None:intergenic | 20.0% |
| !!! | TCAAACTCAGAATTTTTTTT+TGG | + | chr3.1:57553535-57553554 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTTGTTGTAATTA+TGG | - | chr3.1:57553240-57553259 | MS.gene057321:intron | 20.0% |
| !!! | TTAGCTGTAACTTTTTTTAT+GGG | - | chr3.1:57554653-57554672 | MS.gene057321:intron | 20.0% |
| !!! | TTGAATTTTTGTCTAGATAA+GGG | - | chr3.1:57552530-57552549 | MS.gene057321:CDS | 20.0% |
| !!! | TTGCTTATTGTTTTTAAAAC+GGG | - | chr3.1:57553725-57553744 | MS.gene057321:intron | 20.0% |
| !!! | TTTAGCTGTAACTTTTTTTA+TGG | - | chr3.1:57554652-57554671 | MS.gene057321:intron | 20.0% |
| ! | AAATTTATATCAGATGCAGT+AGG | - | chr3.1:57556010-57556029 | MS.gene057321:intron | 25.0% |
| ! | AACAAAAACTTCAGGAATTT+AGG | + | chr3.1:57552503-57552522 | None:intergenic | 25.0% |
| ! | AACATTTACAGTTCTTTGTT+GGG | - | chr3.1:57555368-57555387 | MS.gene057321:intron | 25.0% |
| ! | AAGAGAAAATATGAATGAGT+TGG | - | chr3.1:57551980-57551999 | MS.gene057321:intron | 25.0% |
| ! | AATACGAAATGGTTTCTTTA+GGG | - | chr3.1:57554776-57554795 | MS.gene057321:intron | 25.0% |
| ! | ACATATTAAAATGTAGATGG+AGG | + | chr3.1:57551514-57551533 | None:intergenic | 25.0% |
| ! | ATAAGATGAACAAAAACTTC+AGG | + | chr3.1:57552511-57552530 | None:intergenic | 25.0% |
| ! | ATACAACAATATCCTTACTT+TGG | + | chr3.1:57551639-57551658 | None:intergenic | 25.0% |
| ! | CCATTGGTATATAAAACAAA+TGG | - | chr3.1:57554681-57554700 | MS.gene057321:intron | 25.0% |
| ! | CTTAAAAGAATCAGATAAGA+GGG | - | chr3.1:57552897-57552916 | MS.gene057321:intron | 25.0% |
| ! | GGATCTAGATATTAATGAAT+TGG | - | chr3.1:57553136-57553155 | MS.gene057321:intron | 25.0% |
| ! | GTATTTATAGATATGATAGG+AGG | - | chr3.1:57551655-57551674 | MS.gene057321:intron | 25.0% |
| ! | TAAAAAAAAATAGGAGCGAA+TGG | - | chr3.1:57552804-57552823 | MS.gene057321:intron | 25.0% |
| ! | TAATACGAAATGGTTTCTTT+AGG | - | chr3.1:57554775-57554794 | MS.gene057321:intron | 25.0% |
| !! | AAATAGATTTGCTCATGTAA+TGG | - | chr3.1:57552253-57552272 | MS.gene057321:intron | 25.0% |
| !! | AGAGTTGTAATTTTCACAAA+TGG | + | chr3.1:57552935-57552954 | None:intergenic | 25.0% |
| !! | ATTGATTAATTTTTCATCGC+AGG | - | chr3.1:57555955-57555974 | MS.gene057321:intron | 25.0% |
| !! | CTTTCAAACTCAAGAAATTT+TGG | + | chr3.1:57553601-57553620 | None:intergenic | 25.0% |
| !! | GACAAATAAAGCTTTATAGA+GGG | + | chr3.1:57555232-57555251 | None:intergenic | 25.0% |
| !! | TGACAAATAAAGCTTTATAG+AGG | + | chr3.1:57555233-57555252 | None:intergenic | 25.0% |
| !! | TGGTTTTTGACATATTACTA+TGG | - | chr3.1:57553168-57553187 | MS.gene057321:CDS | 25.0% |
| !! | TTCAAACTCAGAAGAAATTT+TGG | + | chr3.1:57552391-57552410 | None:intergenic | 25.0% |
| !! | TTTTCTCTTATAGCTTATCT+AGG | + | chr3.1:57551969-57551988 | None:intergenic | 25.0% |
| !!! | AATTGGATGTAAGTATTGAT+TGG | - | chr3.1:57555156-57555175 | MS.gene057321:intron | 25.0% |
| !!! | AGTTTTGACTTTGATTGATA+AGG | - | chr3.1:57554182-57554201 | MS.gene057321:intron | 25.0% |
| !!! | CCATTTGTTTTATATACCAA+TGG | + | chr3.1:57554684-57554703 | None:intergenic | 25.0% |
| !!! | CTAATTAGAGGTACTTTTTT+AGG | - | chr3.1:57554059-57554078 | MS.gene057321:intron | 25.0% |
| !!! | TTTTAAAAGAGTTCCAAGTA+CGG | + | chr3.1:57552330-57552349 | None:intergenic | 25.0% |
| AAAATGTTCACTCTGATATC+TGG | - | chr3.1:57554583-57554602 | MS.gene057321:intron | 30.0% | |
| AAAGAACTGTAAATGTTCAC+GGG | + | chr3.1:57555365-57555384 | None:intergenic | 30.0% | |
| AAGCAAGTCTATATACAGTA+TGG | + | chr3.1:57555538-57555557 | None:intergenic | 30.0% | |
| AAGCTTATCAAAATCAGATG+GGG | + | chr3.1:57556053-57556072 | None:intergenic | 30.0% | |
| AAGGAAAAAAGAAAGAAAGC+GGG | + | chr3.1:57555198-57555217 | None:intergenic | 30.0% | |
| AATCAAAAGGAAGTCATAGT+TGG | - | chr3.1:57554441-57554460 | MS.gene057321:intron | 30.0% | |
| ACAAGATTAGAGAGTAAGTT+GGG | - | chr3.1:57551827-57551846 | MS.gene057321:intron | 30.0% | |
| ACAAGCTTATCAAAATCAGA+TGG | + | chr3.1:57556055-57556074 | None:intergenic | 30.0% | |
| ACATTTACAGTTCTTTGTTG+GGG | - | chr3.1:57555369-57555388 | MS.gene057321:intron | 30.0% | |
| AGAAACTAGACTTAGTTGTT+TGG | - | chr3.1:57551876-57551895 | MS.gene057321:intron | 30.0% | |
| AGTGATAACATTGACAACTA+TGG | + | chr3.1:57554493-57554512 | None:intergenic | 30.0% | |
| ATAAGATGAACAAACACTTG+AGG | + | chr3.1:57553881-57553900 | None:intergenic | 30.0% | |
| ATACAACAATGTCATTACTC+TGG | + | chr3.1:57552781-57552800 | None:intergenic | 30.0% | |
| ATATACAGTATGGTGAAACT+TGG | + | chr3.1:57555528-57555547 | None:intergenic | 30.0% | |
| ATCATTGTGAACTCTATGTT+TGG | - | chr3.1:57552752-57552771 | MS.gene057321:intron | 30.0% | |
| ATTCATTTGACTGTTGATAC+AGG | - | chr3.1:57555010-57555029 | MS.gene057321:intron | 30.0% | |
| CAAAGAACTGTAAATGTTCA+CGG | + | chr3.1:57555366-57555385 | None:intergenic | 30.0% | |
| CAAGCTTATCAAAATCAGAT+GGG | + | chr3.1:57556054-57556073 | None:intergenic | 30.0% | |
| CATCACTTTATTGTTTCCAT+TGG | - | chr3.1:57555577-57555596 | MS.gene057321:intron | 30.0% | |
| GAAACTAGACTTAGTTGTTT+GGG | - | chr3.1:57551877-57551896 | MS.gene057321:intron | 30.0% | |
| GAACATTTACAGTTCTTTGT+TGG | - | chr3.1:57555367-57555386 | MS.gene057321:intron | 30.0% | |
| GAAGGAAAAAAGAAAGAAAG+CGG | + | chr3.1:57555199-57555218 | None:intergenic | 30.0% | |
| GCTTAAAAGAATCAGATAAG+AGG | - | chr3.1:57552896-57552915 | MS.gene057321:intron | 30.0% | |
| GTATCAACAGTCAAATGAAT+GGG | + | chr3.1:57555010-57555029 | None:intergenic | 30.0% | |
| GTGTAAAAGTTATACGCTTA+AGG | - | chr3.1:57554228-57554247 | MS.gene057321:intron | 30.0% | |
| GTGTCAAACAATTTATCTCT+TGG | - | chr3.1:57555067-57555086 | MS.gene057321:intron | 30.0% | |
| GTTTCTCTTATAGCTTATCT+AGG | + | chr3.1:57553107-57553126 | None:intergenic | 30.0% | |
| TAATGAATTGGTGAAAGACA+TGG | - | chr3.1:57553148-57553167 | MS.gene057321:intron | 30.0% | |
| TACTACTCACTTTATTGTCT+AGG | - | chr3.1:57555927-57555946 | MS.gene057321:intron | 30.0% | |
| TATTTATGCAGGTATTCAAC+TGG | - | chr3.1:57554923-57554942 | MS.gene057321:intron | 30.0% | |
| TGTATCAACAGTCAAATGAA+TGG | + | chr3.1:57555011-57555030 | None:intergenic | 30.0% | |
| TTGTTTCAGTTTCATGAAAC+TGG | - | chr3.1:57551706-57551725 | MS.gene057321:intron | 30.0% | |
| ! | AATGTCAGTTGATATCCTAA+AGG | - | chr3.1:57555776-57555795 | MS.gene057321:intron | 30.0% |
| ! | ATTAATTTTTCATCGCAGGA+AGG | - | chr3.1:57555959-57555978 | MS.gene057321:intron | 30.0% |
| ! | CAACCATCTTTTCTTACTAT+AGG | + | chr3.1:57553000-57553019 | None:intergenic | 30.0% |
| ! | CTACCATCTTTTCTACTAAT+AGG | + | chr3.1:57551858-57551877 | None:intergenic | 30.0% |
| ! | TTAATTTTTCATCGCAGGAA+GGG | - | chr3.1:57555960-57555979 | MS.gene057321:intron | 30.0% |
| ! | TTTGACTTTGATTGATAAGG+TGG | - | chr3.1:57554185-57554204 | MS.gene057321:intron | 30.0% |
| !! | AAACTAGACTTAGGTTGTTT+TGG | - | chr3.1:57553020-57553039 | MS.gene057321:intron | 30.0% |
| !! | AATTTCCCAATTTTGTTGTC+TGG | + | chr3.1:57555995-57556014 | None:intergenic | 30.0% |
| !! | CAAATATGTTGATGATGTTG+TGG | - | chr3.1:57555884-57555903 | MS.gene057321:intron | 30.0% |
| !! | CTTCCTTTTGATTCACTTTT+TGG | + | chr3.1:57554434-57554453 | None:intergenic | 30.0% |
| !! | GATTATCACTGATTCAAAGA+AGG | + | chr3.1:57552666-57552685 | None:intergenic | 30.0% |
| !!! | AGGAAGTTTTTTTCTCTTTG+CGG | - | chr3.1:57554079-57554098 | MS.gene057321:intron | 30.0% |
| !!! | CTTTTGATTCACTTTTTGGT+GGG | + | chr3.1:57554430-57554449 | None:intergenic | 30.0% |
| !!! | TTTTAGCTTCAAAAGTGAGA+AGG | + | chr3.1:57553274-57553293 | None:intergenic | 30.0% |
| AAAAAATAGGAGCGAATGGA+TGG | - | chr3.1:57552808-57552827 | MS.gene057321:intron | 35.0% | |
| AAAAATGAAAGTGGGTCTCT+TGG | - | chr3.1:57553752-57553771 | MS.gene057321:intron | 35.0% | |
| AAAAGGAAGTCATAGTTGGA+TGG | - | chr3.1:57554445-57554464 | MS.gene057321:intron | 35.0% | |
| AAAATGAAAGTGGGTCTCTT+GGG | - | chr3.1:57553753-57553772 | MS.gene057321:intron | 35.0% | |
| AACAAACACTTGAGGAACTT+AGG | + | chr3.1:57553873-57553892 | None:intergenic | 35.0% | |
| AACAGTCAAATGAATGGGAT+TGG | + | chr3.1:57555005-57555024 | None:intergenic | 35.0% | |
| AACGATAGTAGACCAAATAG+AGG | - | chr3.1:57551937-57551956 | MS.gene057321:intron | 35.0% | |
| AAGAATCAGATAAGAGGGAA+TGG | - | chr3.1:57552902-57552921 | MS.gene057321:intron | 35.0% | |
| ACAACATTAGAAGAGAGTTG+GGG | - | chr3.1:57552969-57552988 | MS.gene057321:intron | 35.0% | |
| ACAATTTATCTCTTGGAGAC+AGG | - | chr3.1:57555074-57555093 | MS.gene057321:intron | 35.0% | |
| ACAGTCAAATGAATGGGATT+GGG | + | chr3.1:57555004-57555023 | None:intergenic | 35.0% | |
| ACAGTTTCAAGAAATTCCAC+TGG | - | chr3.1:57555108-57555127 | MS.gene057321:intron | 35.0% | |
| ACGATAGTAGACCAAATAGA+GGG | - | chr3.1:57551938-57551957 | MS.gene057321:intron | 35.0% | |
| ACTGGAATGAAATTCATTGC+TGG | - | chr3.1:57552867-57552886 | MS.gene057321:intron | 35.0% | |
| AGATGGTTGAAACTAGACTT+AGG | - | chr3.1:57553011-57553030 | MS.gene057321:intron | 35.0% | |
| AGCTTATCAAAATCAGATGG+GGG | + | chr3.1:57556052-57556071 | None:intergenic | 35.0% | |
| ATAGAGGGAGAAGAATAAGA+AGG | + | chr3.1:57555217-57555236 | None:intergenic | 35.0% | |
| ATTGCTCGAACTAATCAGAT+AGG | - | chr3.1:57551750-57551769 | MS.gene057321:CDS | 35.0% | |
| CAAATACACCACTAAAGAAG+AGG | + | chr3.1:57554861-57554880 | None:intergenic | 35.0% | |
| CATTTACAGTTCTTTGTTGG+GGG | - | chr3.1:57555370-57555389 | MS.gene057321:intron | 35.0% | |
| CCACCAAAAAGTGAATCAAA+AGG | - | chr3.1:57554428-57554447 | MS.gene057321:intron | 35.0% | |
| CTAATTCCCACATTAAGTGT+GGG | + | chr3.1:57552304-57552323 | None:intergenic | 35.0% | |
| CTCTTCTTTAGTGGTGTATT+TGG | - | chr3.1:57554859-57554878 | MS.gene057321:intron | 35.0% | |
| CTTCTCGAGAATAAAACTCA+TGG | + | chr3.1:57554979-57554998 | None:intergenic | 35.0% | |
| CTTGGCAGAAAAATTGAACA+CGG | - | chr3.1:57556315-57556334 | MS.gene057321:CDS | 35.0% | |
| GACAACATTAGAAGAGAGTT+GGG | - | chr3.1:57552968-57552987 | MS.gene057321:intron | 35.0% | |
| GACAAGATTAGAGAGTAAGT+TGG | - | chr3.1:57551826-57551845 | MS.gene057321:intron | 35.0% | |
| GAGAAAATCAATCCAGTAGT+AGG | - | chr3.1:57555414-57555433 | MS.gene057321:intron | 35.0% | |
| GAGGAACAGCATATGAATTA+CGG | + | chr3.1:57551459-57551478 | None:intergenic | 35.0% | |
| GATTGACACAACATTACCAA+TGG | + | chr3.1:57555596-57555615 | None:intergenic | 35.0% | |
| GCACCTATAGTAAGAAAAGA+TGG | - | chr3.1:57552994-57553013 | MS.gene057321:intron | 35.0% | |
| GCACCTATTAGTAGAAAAGA+TGG | - | chr3.1:57551852-57551871 | MS.gene057321:intron | 35.0% | |
| GGGACAACAACATATTATGA+TGG | + | chr3.1:57554410-57554429 | None:intergenic | 35.0% | |
| TCAGAAGTTCATGCTCTTAA+TGG | + | chr3.1:57552221-57552240 | None:intergenic | 35.0% | |
| TCTGATTCATCTCATACAAG+AGG | + | chr3.1:57553958-57553977 | None:intergenic | 35.0% | |
| TGACAACATTAGAAGAGAGT+TGG | - | chr3.1:57552967-57552986 | MS.gene057321:intron | 35.0% | |
| TTGCACCAGACAACAAAATT+GGG | - | chr3.1:57555987-57556006 | MS.gene057321:intron | 35.0% | |
| TTGCTTTCGAAGCTAAAACA+TGG | - | chr3.1:57553314-57553333 | MS.gene057321:intron | 35.0% | |
| TTTGTTTGGAAGCCAAAGTA+AGG | - | chr3.1:57551624-57551643 | MS.gene057321:CDS | 35.0% | |
| ! | AAGAGACCCACTTTCATTTT+TGG | + | chr3.1:57553753-57553772 | None:intergenic | 35.0% |
| ! | AATGTTCACGGGTTGTATAA+AGG | + | chr3.1:57555354-57555373 | None:intergenic | 35.0% |
| ! | AATTGTTCTGACCTTTTTCC+AGG | - | chr3.1:57554365-57554384 | MS.gene057321:intron | 35.0% |
| ! | CAATTAGAGGCTTTGTCATT+TGG | + | chr3.1:57555503-57555522 | None:intergenic | 35.0% |
| ! | CATTTTGAACCTACGTCATA+TGG | + | chr3.1:57554569-57554588 | None:intergenic | 35.0% |
| ! | GTTACTGTGTTTTACGAAGT+GGG | - | chr3.1:57556108-57556127 | MS.gene057321:intron | 35.0% |
| ! | GTTTCTTTAGAGATCATCAC+TGG | - | chr3.1:57554703-57554722 | MS.gene057321:intron | 35.0% |
| ! | GTTTGACACATAAGCTTTGA+TGG | + | chr3.1:57555056-57555075 | None:intergenic | 35.0% |
| ! | TGGTTTTTGACATAACACCA+TGG | - | chr3.1:57552012-57552031 | MS.gene057321:intron | 35.0% |
| ! | TGTTACTGTGTTTTACGAAG+TGG | - | chr3.1:57556107-57556126 | MS.gene057321:intron | 35.0% |
| !! | AGAGACCCACTTTCATTTTT+GGG | + | chr3.1:57553752-57553771 | None:intergenic | 35.0% |
| !! | CTTTGAAATCCATATGACGT+AGG | - | chr3.1:57554557-57554576 | MS.gene057321:intron | 35.0% |
| !! | TCACCTAACATAGCTTTGTT+TGG | - | chr3.1:57556217-57556236 | MS.gene057321:CDS | 35.0% |
| !!! | CCTTTTGATTCACTTTTTGG+TGG | + | chr3.1:57554431-57554450 | None:intergenic | 35.0% |
| !!! | TTTTAGCTTCGAAAGCAAGA+AGG | + | chr3.1:57553312-57553331 | None:intergenic | 35.0% |
| !!! | TTTTTTATGGGAAGACCCAT+TGG | - | chr3.1:57554665-57554684 | MS.gene057321:intron | 35.0% |
| AAAATCAGATGGGGGCAATT+TGG | + | chr3.1:57556044-57556063 | None:intergenic | 40.0% | |
| AAAATCCCCTCTGACTTAGA+AGG | - | chr3.1:57555813-57555832 | MS.gene057321:intron | 40.0% | |
| AAATCAGATGGGGGCAATTT+GGG | + | chr3.1:57556043-57556062 | None:intergenic | 40.0% | |
| AATTCCACTGGATCTTCGTA+TGG | - | chr3.1:57555120-57555139 | MS.gene057321:intron | 40.0% | |
| ACACATGCTTCATCTGTTTC+AGG | - | chr3.1:57556243-57556262 | MS.gene057321:CDS | 40.0% | |
| ACACTTACACTACCTACTAC+TGG | + | chr3.1:57555429-57555448 | None:intergenic | 40.0% | |
| ACATGAATCAAATGACGCCA+TGG | + | chr3.1:57552032-57552051 | None:intergenic | 40.0% | |
| ACTAATCAGATAGGAGGGAT+TGG | - | chr3.1:57551759-57551778 | MS.gene057321:CDS | 40.0% | |
| AGATGTTGAATACGACGAGA+GGG | + | chr3.1:57551348-57551367 | None:intergenic | 40.0% | |
| AGGAATTTAGGAACAGAACC+CGG | + | chr3.1:57552491-57552510 | None:intergenic | 40.0% | |
| AGTAGAATCGTACCTTGATG+AGG | + | chr3.1:57553783-57553802 | None:intergenic | 40.0% | |
| ATACAGGATTCACAACTGGA+GGG | - | chr3.1:57555026-57555045 | MS.gene057321:intron | 40.0% | |
| CACAAGAACTCAACTTAGCT+TGG | - | chr3.1:57556297-57556316 | MS.gene057321:CDS | 40.0% | |
| CAGCCAAACAAAGCTATGTT+AGG | + | chr3.1:57556223-57556242 | None:intergenic | 40.0% | |
| CGATAGTAGACCAAATAGAG+GGG | - | chr3.1:57551939-57551958 | MS.gene057321:intron | 40.0% | |
| CTAAGTTGCCTCTTCTTTAG+TGG | - | chr3.1:57554850-57554869 | MS.gene057321:intron | 40.0% | |
| CTCGAACTAATCAGATAGGA+GGG | - | chr3.1:57551754-57551773 | MS.gene057321:CDS | 40.0% | |
| CTTGGATATGTTCTTCCTGA+TGG | - | chr3.1:57551421-57551440 | MS.gene057321:intron | 40.0% | |
| GAAGAAATAGACACGACTAC+AGG | + | chr3.1:57554263-57554282 | None:intergenic | 40.0% | |
| GCGTCATTTGATTCATGTAG+CGG | - | chr3.1:57552034-57552053 | MS.gene057321:intron | 40.0% | |
| GCTAATTCCCACATTAAGTG+TGG | + | chr3.1:57552305-57552324 | None:intergenic | 40.0% | |
| GTAGAATCGTACCTTGATGA+GGG | + | chr3.1:57553782-57553801 | None:intergenic | 40.0% | |
| GTGAAACTTGGCTCAATTAG+AGG | + | chr3.1:57555516-57555535 | None:intergenic | 40.0% | |
| GTTGATACAGGATTCACAAC+TGG | - | chr3.1:57555022-57555041 | MS.gene057321:intron | 40.0% | |
| GTTGCACCAGACAACAAAAT+TGG | - | chr3.1:57555986-57556005 | MS.gene057321:intron | 40.0% | |
| TAAAATGTAGATGGAGGCGA+GGG | + | chr3.1:57551508-57551527 | None:intergenic | 40.0% | |
| TCACAATGAATCCGTTGATC+AGG | - | chr3.1:57551477-57551496 | MS.gene057321:intron | 40.0% | |
| TCACTTCTGAACCAAGCAAT+TGG | - | chr3.1:57555630-57555649 | MS.gene057321:intron | 40.0% | |
| TCAGATGTTCACGCTCTTAA+TGG | + | chr3.1:57553362-57553381 | None:intergenic | 40.0% | |
| TCTGATTCCTCTCATACAAG+AGG | + | chr3.1:57552588-57552607 | None:intergenic | 40.0% | |
| TGAAAAGACCTCCAATTGCT+TGG | + | chr3.1:57555644-57555663 | None:intergenic | 40.0% | |
| TGGATCTGGGAAATTATAGG+AGG | + | chr3.1:57553812-57553831 | None:intergenic | 40.0% | |
| TGTAACGAGAGTAGATCAGA+AGG | - | chr3.1:57553072-57553091 | MS.gene057321:intron | 40.0% | |
| TTAAAATGTAGATGGAGGCG+AGG | + | chr3.1:57551509-57551528 | None:intergenic | 40.0% | |
| TTCATTCCAGTTTCATGAGC+TGG | + | chr3.1:57552858-57552877 | None:intergenic | 40.0% | |
| TTTCAGCTTCAAAAGCGAGA+AGG | + | chr3.1:57552172-57552191 | None:intergenic | 40.0% | |
| ! | AGTGGTGTATTTGGTGATCT+TGG | - | chr3.1:57554868-57554887 | MS.gene057321:intron | 40.0% |
| ! | GTGGTGTATTTGGTGATCTT+GGG | - | chr3.1:57554869-57554888 | MS.gene057321:intron | 40.0% |
| ! | GTTTCTTTAGGGATCATCAC+TGG | - | chr3.1:57554787-57554806 | MS.gene057321:intron | 40.0% |
| ! | TGATATCTGGAAGTGTGGAA+TGG | - | chr3.1:57554596-57554615 | MS.gene057321:intron | 40.0% |
| ! | TGATCAACGGATTCATTGTG+AGG | + | chr3.1:57551478-57551497 | None:intergenic | 40.0% |
| ! | TTTTTGTCTAGATAAGGGCG+AGG | - | chr3.1:57552535-57552554 | MS.gene057321:CDS | 40.0% |
| !! | AAGCCTTATTCCACTAAGTG+GGG | + | chr3.1:57553217-57553236 | None:intergenic | 40.0% |
| !! | CAAGCCTTATTCCACTAAGT+GGG | + | chr3.1:57553218-57553237 | None:intergenic | 40.0% |
| !! | GAATGAGTTGGTGAAAGACA+TGG | - | chr3.1:57551992-57552011 | MS.gene057321:intron | 40.0% |
| !!! | CTTTTGAAGCTGAAACATGG+AGG | - | chr3.1:57552177-57552196 | MS.gene057321:intron | 40.0% |
| !!! | TCGCTTTTGAAGCTGAAACA+TGG | - | chr3.1:57552174-57552193 | MS.gene057321:intron | 40.0% |
| ACGGGACCCAAAAATGAAAG+TGG | - | chr3.1:57553743-57553762 | MS.gene057321:intron | 45.0% | |
| AGGAACTTAGGAACAGAACC+CGG | + | chr3.1:57553861-57553880 | None:intergenic | 45.0% | |
| ATGGTTGAAGCTGAGCGAAT+TGG | - | chr3.1:57555139-57555158 | MS.gene057321:intron | 45.0% | |
| CACTCTGATATCTGGAAGTG+TGG | - | chr3.1:57554591-57554610 | MS.gene057321:intron | 45.0% | |
| CAGATGTTGAATACGACGAG+AGG | + | chr3.1:57551349-57551368 | None:intergenic | 45.0% | |
| CCACTTAGTGGAATAAGGCT+TGG | - | chr3.1:57553216-57553235 | MS.gene057321:CDS | 45.0% | |
| CGCTGCATCTGGGAAATTAT+AGG | + | chr3.1:57552445-57552464 | None:intergenic | 45.0% | |
| CGCTGGATCTGGGAAATTAT+AGG | + | chr3.1:57553815-57553834 | None:intergenic | 45.0% | |
| CGGATATCAACAGTTCCATC+AGG | + | chr3.1:57551439-57551458 | None:intergenic | 45.0% | |
| CGGGACCCAAAAATGAAAGT+GGG | - | chr3.1:57553744-57553763 | MS.gene057321:intron | 45.0% | |
| CTTCTGAACCAAGCAATTGG+AGG | - | chr3.1:57555633-57555652 | MS.gene057321:intron | 45.0% | |
| GAATTGCAACACTGTGCGAT+TGG | + | chr3.1:57551281-57551300 | None:intergenic | 45.0% | |
| GATACAGGATTCACAACTGG+AGG | - | chr3.1:57555025-57555044 | MS.gene057321:intron | 45.0% | |
| GCTCGAACTAATCAGATAGG+AGG | - | chr3.1:57551753-57551772 | MS.gene057321:CDS | 45.0% | |
| GTTTCAGGATCACTTGCTCA+TGG | - | chr3.1:57556258-57556277 | MS.gene057321:CDS | 45.0% | |
| TACAGGATTCACAACTGGAG+GGG | - | chr3.1:57555027-57555046 | MS.gene057321:intron | 45.0% | |
| TAGAGAGAAGAGAAGACGTC+TGG | - | chr3.1:57551904-57551923 | MS.gene057321:intron | 45.0% | |
| TAGCTGCCCACACTTAATGT+GGG | - | chr3.1:57552295-57552314 | MS.gene057321:intron | 45.0% | |
| TCAACCATACGAAGATCCAG+TGG | + | chr3.1:57555127-57555146 | None:intergenic | 45.0% | |
| TCAACTGGACTTGGAGTAAC+TGG | - | chr3.1:57554938-57554957 | MS.gene057321:intron | 45.0% | |
| TCCATGCCTTCTAAGTCAGA+GGG | + | chr3.1:57555822-57555841 | None:intergenic | 45.0% | |
| TCTAGGTCTTCCCCTCTATT+TGG | + | chr3.1:57551952-57551971 | None:intergenic | 45.0% | |
| TCTGACACCTCTTGTATGAG+AGG | - | chr3.1:57552578-57552597 | MS.gene057321:CDS | 45.0% | |
| TGCAGGTATTCAACTGGACT+TGG | - | chr3.1:57554929-57554948 | MS.gene057321:intron | 45.0% | |
| TGTCAACAGTGGTTGCCTTT+AGG | + | chr3.1:57555794-57555813 | None:intergenic | 45.0% | |
| TTAGCTGCCCACACTTAATG+TGG | - | chr3.1:57552294-57552313 | MS.gene057321:intron | 45.0% | |
| TTCACTCCAGCTCATGAAAC+TGG | - | chr3.1:57552849-57552868 | MS.gene057321:intron | 45.0% | |
| TTCCATGCCTTCTAAGTCAG+AGG | + | chr3.1:57555823-57555842 | None:intergenic | 45.0% | |
| TTCTCAGAGCTTATCCGCTA+AGG | - | chr3.1:57551318-57551337 | MS.gene057321:CDS | 45.0% | |
| ! | AGAGGGGATTTTGTCAACAG+TGG | + | chr3.1:57555805-57555824 | None:intergenic | 45.0% |
| ! | GTGTATTTGGTGATCTTGGG+AGG | - | chr3.1:57554872-57554891 | MS.gene057321:intron | 45.0% |
| ! | TCTGGAAGTGTGGAATGGAA+TGG | - | chr3.1:57554601-57554620 | MS.gene057321:intron | 45.0% |
| ! | TGGGAATTAGCTTCCGTACT+TGG | - | chr3.1:57552314-57552333 | MS.gene057321:intron | 45.0% |
| ! | TGTTCTGACCTTTTTCCAGG+TGG | - | chr3.1:57554368-57554387 | MS.gene057321:intron | 45.0% |
| !! | AAGCCTTATTCCACCAAGTG+GGG | + | chr3.1:57552061-57552080 | None:intergenic | 45.0% |
| !! | AGAAGGCATGGAAGCATCAA+TGG | - | chr3.1:57555830-57555849 | MS.gene057321:intron | 45.0% |
| !! | CAAGCCTTATTCCACCAAGT+GGG | + | chr3.1:57552062-57552081 | None:intergenic | 45.0% |
| !! | CCAAGCCTTATTCCACTAAG+TGG | + | chr3.1:57553219-57553238 | None:intergenic | 45.0% |
| !! | TTCATTAAAAAAATTATTAT+AGG | + | chr3.1:57554018-57554037 | None:intergenic | 5.0% |
| AAAGTGGTTGTCGCTGCATC+TGG | + | chr3.1:57552456-57552475 | None:intergenic | 50.0% | |
| AAGTGGTTGTCGCTGCATCT+GGG | + | chr3.1:57552455-57552474 | None:intergenic | 50.0% | |
| AATAGGCAACCACGAGCTTC+AGG | + | chr3.1:57555295-57555314 | None:intergenic | 50.0% | |
| ACAGGATTCACAACTGGAGG+GGG | - | chr3.1:57555028-57555047 | MS.gene057321:intron | 50.0% | |
| ACTGGACTTGGAGTAACTGG+TGG | - | chr3.1:57554941-57554960 | MS.gene057321:intron | 50.0% | |
| ATGACGCGTTCAGCTTGATC+AGG | + | chr3.1:57551391-57551410 | None:intergenic | 50.0% | |
| ATGCAGCGACAACCACTTTC+TGG | - | chr3.1:57552457-57552476 | MS.gene057321:intron | 50.0% | |
| CCATGCCTTCTAAGTCAGAG+GGG | + | chr3.1:57555821-57555840 | None:intergenic | 50.0% | |
| CGAGAGTAGATCAGAAGGAG+AGG | - | chr3.1:57553077-57553096 | MS.gene057321:intron | 50.0% | |
| CTCTTGGGAAACCCTCATCA+AGG | - | chr3.1:57553768-57553787 | MS.gene057321:intron | 50.0% | |
| GAGCTTCAGGACACAAGCTT+CGG | + | chr3.1:57555282-57555301 | None:intergenic | 50.0% | |
| GATCAAGCTGAACGCGTCAT+TGG | - | chr3.1:57551391-57551410 | MS.gene057321:intron | 50.0% | |
| GCTTGTGAACGACAGCTTAC+AGG | - | chr3.1:57556069-57556088 | MS.gene057321:intron | 50.0% | |
| GGACCCCACTTAGTGGAATA+AGG | - | chr3.1:57553211-57553230 | MS.gene057321:CDS | 50.0% | |
| ! | CCACTTGGTGGAATAAGGCT+TGG | - | chr3.1:57552060-57552079 | MS.gene057321:intron | 50.0% |
| !! | AGCGGATAAGCTCTGAGAAG+AGG | + | chr3.1:57551317-57551336 | None:intergenic | 50.0% |
| !! | CACTTTCTGGCTTGATCACC+GGG | - | chr3.1:57552470-57552489 | MS.gene057321:CDS | 50.0% |
| !! | CCAAGCCTTATTCCACCAAG+TGG | + | chr3.1:57552063-57552082 | None:intergenic | 50.0% |
| !! | CCACTTTCTGGCTTGATCAC+CGG | - | chr3.1:57552469-57552488 | MS.gene057321:CDS | 50.0% |
| AAAGTGGCTGTCGCTGGATC+TGG | + | chr3.1:57553826-57553845 | None:intergenic | 55.0% | |
| AAGTGGCTGTCGCTGGATCT+GGG | + | chr3.1:57553825-57553844 | None:intergenic | 55.0% | |
| ACTCTATGTCCAACGCCACC+TGG | + | chr3.1:57554386-57554405 | None:intergenic | 55.0% | |
| AGCTTGTGTCCTGAAGCTCG+TGG | - | chr3.1:57555283-57555302 | MS.gene057321:intron | 55.0% | |
| ATGTAGATGGAGGCGAGGGA+AGG | + | chr3.1:57551504-57551523 | None:intergenic | 55.0% | |
| CCCCTCTGACTTAGAAGGCA+TGG | - | chr3.1:57555818-57555837 | MS.gene057321:intron | 55.0% | |
| CCGGTGATCAAGCCAGAAAG+TGG | + | chr3.1:57552472-57552491 | None:intergenic | 55.0% | |
| CGAGGGAAGGACCTGATCAA+CGG | + | chr3.1:57551491-57551510 | None:intergenic | 55.0% | |
| CGCGTCATTGGAACGCTTCT+TGG | - | chr3.1:57551403-57551422 | MS.gene057321:intron | 55.0% | |
| GACGAGAGGGTGAACCTTAG+CGG | + | chr3.1:57551335-57551354 | None:intergenic | 55.0% | |
| GTCCAACGCCACCTGGAAAA+AGG | + | chr3.1:57554379-57554398 | None:intergenic | 55.0% | |
| ! | ATCCAGCGACAGCCACTTTC+TGG | - | chr3.1:57553827-57553846 | MS.gene057321:intron | 55.0% |
| ! | GACCTTTTTCCAGGTGGCGT+TGG | - | chr3.1:57554374-57554393 | MS.gene057321:intron | 55.0% |
| ! | GGACCCCACTTGGTGGAATA+AGG | - | chr3.1:57552055-57552074 | MS.gene057321:intron | 55.0% |
| !! | ATGTAGCGGACCCCACTTAG+TGG | - | chr3.1:57553204-57553223 | MS.gene057321:CDS | 55.0% |
| !! | TTCATGTAGCGGACCCCACT+TGG | - | chr3.1:57552045-57552064 | MS.gene057321:intron | 55.0% |
| AGCCAGAAAGTGGCTGTCGC+TGG | + | chr3.1:57553832-57553851 | None:intergenic | 60.0% | |
| !! | ATGTAGCGGACCCCACTTGG+TGG | - | chr3.1:57552048-57552067 | MS.gene057321:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 57551268 | 57556354 | 57551268 | ID=MS.gene057321 |
| chr3.1 | mRNA | 57551268 | 57556354 | 57551268 | ID=MS.gene057321.t1;Parent=MS.gene057321 |
| chr3.1 | exon | 57556124 | 57556354 | 57556124 | ID=MS.gene057321.t1.exon1;Parent=MS.gene057321.t1 |
| chr3.1 | CDS | 57556124 | 57556354 | 57556124 | ID=cds.MS.gene057321.t1;Parent=MS.gene057321.t1 |
| chr3.1 | exon | 57553156 | 57553235 | 57553156 | ID=MS.gene057321.t1.exon2;Parent=MS.gene057321.t1 |
| chr3.1 | CDS | 57553156 | 57553235 | 57553156 | ID=cds.MS.gene057321.t1;Parent=MS.gene057321.t1 |
| chr3.1 | exon | 57552459 | 57552688 | 57552459 | ID=MS.gene057321.t1.exon3;Parent=MS.gene057321.t1 |
| chr3.1 | CDS | 57552459 | 57552688 | 57552459 | ID=cds.MS.gene057321.t1;Parent=MS.gene057321.t1 |
| chr3.1 | exon | 57551717 | 57551838 | 57551717 | ID=MS.gene057321.t1.exon4;Parent=MS.gene057321.t1 |
| chr3.1 | CDS | 57551717 | 57551838 | 57551717 | ID=cds.MS.gene057321.t1;Parent=MS.gene057321.t1 |
| chr3.1 | exon | 57551532 | 57551645 | 57551532 | ID=MS.gene057321.t1.exon5;Parent=MS.gene057321.t1 |
| chr3.1 | CDS | 57551532 | 57551645 | 57551532 | ID=cds.MS.gene057321.t1;Parent=MS.gene057321.t1 |
| chr3.1 | exon | 57551268 | 57551357 | 57551268 | ID=MS.gene057321.t1.exon6;Parent=MS.gene057321.t1 |
| chr3.1 | CDS | 57551268 | 57551357 | 57551268 | ID=cds.MS.gene057321.t1;Parent=MS.gene057321.t1 |
| Gene Sequence |
| Protein sequence |
