Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55149.t1 | XP_003594974.2 | 97.8 | 914 | 12 | 1 | 1 | 914 | 20 | 925 | 0.00E+00 | 1737.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55149.t1 | O65570 | 70.2 | 929 | 251 | 8 | 1 | 914 | 20 | 937 | 0.0e+00 | 1296.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55149.t1 | G7IN22 | 97.8 | 914 | 12 | 1 | 1 | 914 | 20 | 925 | 0.0e+00 | 1737.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056700 | MS.gene55149 | 0.804052 | 2.60E-49 | -1.69E-46 |
MS.gene060398 | MS.gene55149 | 0.881331 | 2.62E-70 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 203 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCTGAAACTGGGGAATTC+TGG | 0.163784 | 2.3:+51927979 | MS.gene55149:CDS |
CATTTACTCCTTGACGTTTC+AGG | 0.184455 | 2.3:-51929648 | None:intergenic |
CTTCAATTACTCGAATTATC+TGG | 0.197582 | 2.3:-51929404 | None:intergenic |
CCCCAGAATTCCCCAGTTTC+AGG | 0.225810 | 2.3:-51927981 | None:intergenic |
AATTTGCCATAGGAGGATTT+TGG | 0.234228 | 2.3:-51926310 | None:intergenic |
CAAGAAGGTGGAGTTGCTTC+TGG | 0.234547 | 2.3:+51927464 | MS.gene55149:CDS |
ATGAATTGGAACCATTAAAT+TGG | 0.242292 | 2.3:-51927767 | None:intergenic |
TTAAGTCCAAGTTTGATTCT+TGG | 0.254888 | 2.3:+51929445 | MS.gene55149:CDS |
GGAGGTTGTACAGTATATTA+AGG | 0.263257 | 2.3:+51927815 | MS.gene55149:CDS |
TGATTGCACTGGACATTTAC+AGG | 0.271012 | 2.3:+51929723 | MS.gene55149:CDS |
TTCTTTCACATCTTCTTCTA+TGG | 0.276973 | 2.3:-51936094 | None:intergenic |
AGTAGCAGCTAGTGCATTAA+AGG | 0.277906 | 2.3:-51935678 | None:intergenic |
GTACAGAATCTGAACAGTTT+TGG | 0.287363 | 2.3:+51931882 | MS.gene55149:CDS |
ATGATACCTCGGTCAGTTAA+AGG | 0.289692 | 2.3:+51935863 | MS.gene55149:CDS |
GTTACTCAGATATCTTTGTC+TGG | 0.304298 | 2.3:+51934393 | MS.gene55149:CDS |
GGATTCCTACGTGATCTTAA+AGG | 0.306222 | 2.3:+51926342 | MS.gene55149:CDS |
GGGGAATTCTGGGGTTTCTT+TGG | 0.312705 | 2.3:+51927990 | MS.gene55149:CDS |
TTGAGAAACTGCAACAAAAT+AGG | 0.317332 | 2.3:-51931973 | None:intergenic |
AATGAAGTTTCTTGCTTCTC+AGG | 0.318363 | 2.3:+51930767 | MS.gene55149:CDS |
GATTCTGTACCTTCCCTTTG+TGG | 0.322489 | 2.3:-51931869 | None:intergenic |
TAAATAGTGGACTTGAAATA+TGG | 0.322692 | 2.3:+51926257 | None:intergenic |
TTAATGGCTGATCCTGAAAC+TGG | 0.338286 | 2.3:+51927969 | MS.gene55149:CDS |
AGCAGAGGATGGAAAGTTAA+TGG | 0.344061 | 2.3:+51927953 | MS.gene55149:intron |
CCTGCTATCTTTACTTGGTC+TGG | 0.345682 | 2.3:+51931356 | MS.gene55149:CDS |
ATCCAGCTCAACTGTCTTGA+TGG | 0.346350 | 2.3:-51927348 | None:intergenic |
CCTTCCATGACAACATATAT+TGG | 0.352063 | 2.3:-51934747 | None:intergenic |
GAATCTGGTGTCGTAGATTT+CGG | 0.352645 | 2.3:-51935761 | None:intergenic |
TAATTCACTGGCTAGCAAAA+TGG | 0.355291 | 2.3:+51930737 | MS.gene55149:CDS |
GAACGTTGCTGGGATTTATC+AGG | 0.361538 | 2.3:-51935599 | None:intergenic |
TGCGTCATGACATCCATTAC+TGG | 0.367590 | 2.3:+51927181 | MS.gene55149:CDS |
TGTATAGCTTGCATATTATC+AGG | 0.369589 | 2.3:-51931149 | None:intergenic |
ATGGTAACTTTGCAGATGTT+GGG | 0.369954 | 2.3:+51934888 | MS.gene55149:intron |
TCCTGAAACTGGGGAATTCT+GGG | 0.370505 | 2.3:+51927980 | MS.gene55149:CDS |
CAAGACTTACTTTGCGGAAA+AGG | 0.370665 | 2.3:+51931064 | MS.gene55149:CDS |
ATCGATTTACAGTGTTGAAA+AGG | 0.375428 | 2.3:+51929097 | MS.gene55149:intron |
AGGATAGAATGGAATTGAAT+TGG | 0.375728 | 2.3:-51930914 | None:intergenic |
TATTGCTATATACTTCATAA+TGG | 0.378420 | 2.3:+51931332 | MS.gene55149:CDS |
ATCTTTCAATATTCGTATCC+TGG | 0.380002 | 2.3:+51930046 | MS.gene55149:CDS |
GCATCCTCTCTATAAGTTCC+TGG | 0.388234 | 2.3:-51931400 | None:intergenic |
TCACCGAGCAGGAAACTTAA+AGG | 0.389184 | 2.3:+51932105 | MS.gene55149:intron |
ACTAGAAGTAAGTGCAGATA+TGG | 0.389659 | 2.3:-51935810 | None:intergenic |
ATCGTGTTCGTGTGCGGGGA+AGG | 0.389967 | 2.3:+51935648 | MS.gene55149:CDS |
TTCAATTACTCGAATTATCT+GGG | 0.390638 | 2.3:-51929403 | None:intergenic |
TCTTTCTTGAATAGATGAAT+TGG | 0.394590 | 2.3:-51927781 | None:intergenic |
ATACGTGGGTGTTCGCCGTT+TGG | 0.395609 | 2.3:-51935555 | None:intergenic |
GGCGTTCATATGGGTAAATC+AGG | 0.400211 | 2.3:-51936143 | None:intergenic |
TTCAAAGAATCGGCCTCAAC+GGG | 0.407392 | 2.3:-51929131 | None:intergenic |
TCCTGATCGTGTTCGTGTGC+GGG | 0.410934 | 2.3:+51935643 | MS.gene55149:CDS |
GGGTTTGATTTAGGGGTGAC+TGG | 0.413508 | 2.3:-51936021 | None:intergenic |
TACGTGGGTGTTCGCCGTTT+GGG | 0.414296 | 2.3:-51935554 | None:intergenic |
CGTTGCATTATTCCGCATCC+AGG | 0.416492 | 2.3:+51931118 | MS.gene55149:CDS |
GATGCTAGTATTGCAGAATC+TGG | 0.417284 | 2.3:-51935776 | None:intergenic |
TCAGATATCTTTGTCTGGGT+TGG | 0.423965 | 2.3:+51934398 | MS.gene55149:CDS |
TCCTCATTGTATGTCTCATC+AGG | 0.426503 | 2.3:-51931092 | None:intergenic |
TATCTTTGTCTGGGTTGGCC+AGG | 0.426942 | 2.3:+51934403 | MS.gene55149:CDS |
GAATTCTGGGGTTTCTTTGG+CGG | 0.427483 | 2.3:+51927993 | MS.gene55149:CDS |
ATCCCAGTCAAAAGATTAGT+AGG | 0.428935 | 2.3:+51931930 | MS.gene55149:CDS |
CTTCTGTCATTAAATCATCC+TGG | 0.440191 | 2.3:-51934352 | None:intergenic |
AGAAAGAGCTAAAGCTTTGG+AGG | 0.440477 | 2.3:+51927797 | MS.gene55149:CDS |
TCAAGAAAGAGCTAAAGCTT+TGG | 0.440709 | 2.3:+51927794 | MS.gene55149:CDS |
TCTTCAGATACAGTTACATC+AGG | 0.444973 | 2.3:-51929477 | None:intergenic |
TATTATCAGGTCCAGTGCCC+TGG | 0.445046 | 2.3:-51931136 | None:intergenic |
CAGATAATTCGAGTAATTGA+AGG | 0.449123 | 2.3:+51929405 | MS.gene55149:CDS |
TGTTCAGTATCGGGAAGTAC+AGG | 0.451092 | 2.3:+51927391 | MS.gene55149:CDS |
TTGAGGCCGATTCTTTGAAA+AGG | 0.452089 | 2.3:+51929135 | MS.gene55149:CDS |
TGAAGGTTTGTAGGATAGAA+TGG | 0.453160 | 2.3:-51930925 | None:intergenic |
TTACTCAGATATCTTTGTCT+GGG | 0.454519 | 2.3:+51934394 | MS.gene55149:CDS |
GAGTGCCTGCATTCTACTCT+TGG | 0.454914 | 2.3:-51934435 | None:intergenic |
ATGAAGTATATAGCAATAAG+AGG | 0.456334 | 2.3:-51931327 | None:intergenic |
CCTTCTTGAGGTATAATACA+AGG | 0.457365 | 2.3:-51927449 | None:intergenic |
GATAAGGACGACTGTCTCAT+TGG | 0.462084 | 2.3:+51930073 | MS.gene55149:CDS |
ATGGACCTGCTATCTTTACT+TGG | 0.463130 | 2.3:+51931351 | MS.gene55149:CDS |
GTTGGAAATGTTCGTCTGGA+TGG | 0.465224 | 2.3:+51929199 | MS.gene55149:CDS |
GATGGACGTGGCAAGGTAGC+AGG | 0.470561 | 2.3:+51929498 | MS.gene55149:CDS |
CTGAGGCCAAGAATCAAACT+TGG | 0.474669 | 2.3:-51929451 | None:intergenic |
AGTTGAAAGGTTCCTACCGC+CGG | 0.478867 | 2.3:-51935711 | None:intergenic |
CCCCGCACACGAACACGATC+AGG | 0.479194 | 2.3:-51935644 | None:intergenic |
CAACCTTACATTGATTGCAC+TGG | 0.482870 | 2.3:+51929712 | MS.gene55149:CDS |
AGGACGTGCTGTTCAGTATC+GGG | 0.483979 | 2.3:+51927382 | MS.gene55149:CDS |
GCAAGCTATACAAGTTGAAC+CGG | 0.486174 | 2.3:+51931160 | MS.gene55149:CDS |
GAGGATGCTGGATATGATAA+AGG | 0.486562 | 2.3:+51931415 | MS.gene55149:CDS |
TTTCTCAGGGTTTGATTTAG+GGG | 0.486825 | 2.3:-51936028 | None:intergenic |
TGAGGCCGATTCTTTGAAAA+GGG | 0.489520 | 2.3:+51929136 | MS.gene55149:CDS |
TTATTCCGCATCCAGGGCAC+TGG | 0.492358 | 2.3:+51931125 | MS.gene55149:CDS |
TGCTACGGGAGGAACGTTGC+TGG | 0.494003 | 2.3:-51935610 | None:intergenic |
GTTGAAAGGTTCCTACCGCC+GGG | 0.494138 | 2.3:-51935710 | None:intergenic |
ATAGCAATAAGAGGAATTCA+AGG | 0.497482 | 2.3:-51931318 | None:intergenic |
GTTGAAAGCTGATGCAGTAA+AGG | 0.498606 | 2.3:+51929681 | MS.gene55149:CDS |
CATGACATCCATTACTGGAT+TGG | 0.498777 | 2.3:+51927186 | MS.gene55149:CDS |
TGTCCAGTGCAATCAATGTA+AGG | 0.499951 | 2.3:-51929715 | None:intergenic |
CAGTCGTCCTTATCTTCTCC+AGG | 0.501958 | 2.3:-51930064 | None:intergenic |
TTTACAATCAAAACCACAAA+GGG | 0.502772 | 2.3:+51931856 | MS.gene55149:CDS |
CCAATATATGTTGTCATGGA+AGG | 0.508420 | 2.3:+51934747 | MS.gene55149:CDS |
TCGATTTACAGTGTTGAAAA+GGG | 0.510341 | 2.3:+51929098 | MS.gene55149:intron |
CTATCTCGCATTTCCCCTCA+TGG | 0.511015 | 2.3:-51927845 | None:intergenic |
TTTAGTGAAGATCGAGCAAA+AGG | 0.511406 | 2.3:-51927702 | None:intergenic |
AAATGCGAGATAGCTGCTAT+TGG | 0.513483 | 2.3:+51927855 | MS.gene55149:CDS |
TGTCTCATTGGAACGTGGAT+AGG | 0.513559 | 2.3:+51930085 | MS.gene55149:CDS |
GAGGACGTGCTGTTCAGTAT+CGG | 0.513997 | 2.3:+51927381 | MS.gene55149:CDS |
GTGGGTTGGAAATGTTCGTC+TGG | 0.515021 | 2.3:+51929195 | MS.gene55149:CDS |
CAGGTCCAGTGCCCTGGATG+CGG | 0.516873 | 2.3:-51931130 | None:intergenic |
TACAAGGTTTGAAATAAGAA+AGG | 0.520144 | 2.3:-51927433 | None:intergenic |
TTCGTATCCTGGAGAAGATA+AGG | 0.521373 | 2.3:+51930057 | MS.gene55149:CDS |
TTCTGTCATTAAATCATCCT+GGG | 0.521470 | 2.3:-51934351 | None:intergenic |
TGGATACAAGACTTACTTTG+CGG | 0.527557 | 2.3:+51931058 | MS.gene55149:CDS |
GCAGCTAGTGCATTAAAGGC+TGG | 0.528598 | 2.3:-51935674 | None:intergenic |
AGCAGACTTATCATTATCAC+TGG | 0.530775 | 2.3:-51928042 | None:intergenic |
CCTGTCCCAAAATCCTCCTA+TGG | 0.532614 | 2.3:+51926304 | MS.gene55149:CDS |
GATGTAACTGTATCTGAAGA+TGG | 0.533885 | 2.3:+51929480 | MS.gene55149:CDS |
GTTACATCAATGTCTGGCAC+AGG | 0.534839 | 2.3:-51936186 | None:intergenic |
TTTCAAAGAATCGGCCTCAA+CGG | 0.535729 | 2.3:-51929132 | None:intergenic |
CAGGACTAACAGACATGCTA+CGG | 0.539604 | 2.3:-51935625 | None:intergenic |
GTCCTGATCGTGTTCGTGTG+CGG | 0.539842 | 2.3:+51935642 | MS.gene55149:CDS |
TTACAGTGTTGAAAAGGGAC+AGG | 0.540094 | 2.3:+51929103 | MS.gene55149:intron |
CTTTGTCTGGGTTGGCCAGG+AGG | 0.540109 | 2.3:+51934406 | MS.gene55149:CDS |
TTGGAAATGTTCGTCTGGAT+GGG | 0.540387 | 2.3:+51929200 | MS.gene55149:CDS |
CAATACAACTGCAGAAGACC+AGG | 0.543128 | 2.3:+51931382 | MS.gene55149:CDS |
CTGTAGGCTCGTATATATGA+AGG | 0.543170 | 2.3:+51930884 | MS.gene55149:intron |
ATAGAAGAAGATGTGAAAGA+AGG | 0.544384 | 2.3:+51936096 | MS.gene55149:CDS |
TATCAGGGAGGGCTTAGTGA+TGG | 0.545709 | 2.3:+51931038 | MS.gene55149:intron |
TACTCTTGGAATCAACCTCC+TGG | 0.547696 | 2.3:-51934421 | None:intergenic |
AAACGGCGAACACCCACGTA+TGG | 0.547897 | 2.3:+51935557 | MS.gene55149:CDS |
GGTTTGGCGCGTGAACGGTC+AGG | 0.549073 | 2.3:+51929967 | MS.gene55149:intron |
TGTTGGGGAACTCATTTCAA+AGG | 0.549818 | 2.3:+51934904 | MS.gene55149:CDS |
GCTACGGGAGGAACGTTGCT+GGG | 0.550775 | 2.3:-51935609 | None:intergenic |
TACATTATCAGAAACCCAAA+CGG | 0.553312 | 2.3:+51935540 | MS.gene55149:intron |
CACGGTTGTTTGTATGCAGA+GGG | 0.554681 | 2.3:+51927519 | MS.gene55149:CDS |
AAGAGCTTCAGCTAATTCAC+TGG | 0.554814 | 2.3:+51930725 | MS.gene55149:CDS |
GATTGGTAAAGACACTAGTC+AGG | 0.556243 | 2.3:+51927203 | MS.gene55149:CDS |
GTTGAGCTGGATGCAGCTCT+CGG | 0.559008 | 2.3:+51927359 | MS.gene55149:CDS |
ATCATAGTTTCTCGTGCAGA+AGG | 0.563119 | 2.3:-51935845 | None:intergenic |
CTCACTCTACAAAACTGCTT+AGG | 0.564026 | 2.3:+51928069 | MS.gene55149:CDS |
ATCTGAAGATGGACGTGGCA+AGG | 0.564373 | 2.3:+51929491 | MS.gene55149:CDS |
CCAGACCAAGTAAAGATAGC+AGG | 0.568264 | 2.3:-51931356 | None:intergenic |
AGAATGCAGGCACTCACGAT+TGG | 0.570498 | 2.3:+51934443 | MS.gene55149:CDS |
CTTCAGATACAGTTACATCA+GGG | 0.572311 | 2.3:-51929476 | None:intergenic |
AGCCATCAAGACAGTTGAGC+TGG | 0.572361 | 2.3:+51927346 | MS.gene55149:CDS |
GGAACTTATAGAGAGGATGC+TGG | 0.572818 | 2.3:+51931403 | MS.gene55149:CDS |
GGCTCCAATATATGTTGTCA+TGG | 0.572897 | 2.3:+51934743 | MS.gene55149:CDS |
GTGCAATCAATGTAAGGTTG+AGG | 0.575078 | 2.3:-51929709 | None:intergenic |
TGTCTTTACCAATCCAGTAA+TGG | 0.576750 | 2.3:-51927194 | None:intergenic |
TGGTAACTTTGCAGATGTTG+GGG | 0.577791 | 2.3:+51934889 | MS.gene55149:intron |
TAATGGCTGATCCTGAAACT+GGG | 0.580468 | 2.3:+51927970 | MS.gene55149:CDS |
CTTTCGAGAGCCCCGGCGGT+AGG | 0.580721 | 2.3:+51935699 | MS.gene55149:CDS |
TGATTCCAAGAGTAGAATGC+AGG | 0.583411 | 2.3:+51934430 | MS.gene55149:CDS |
TCCCAGTCAAAAGATTAGTA+GGG | 0.590135 | 2.3:+51931931 | MS.gene55149:CDS |
CCTGATCGTGTTCGTGTGCG+GGG | 0.591569 | 2.3:+51935644 | MS.gene55149:CDS |
ACAGTTACATCAGGGGTCTG+AGG | 0.591805 | 2.3:-51929468 | None:intergenic |
CGGCGAACACCCACGTATGG+AGG | 0.593381 | 2.3:+51935560 | MS.gene55149:CDS |
ACCAGAGACAATAGATCAGT+GGG | 0.593916 | 2.3:-51932136 | None:intergenic |
TTACTGGAGGTGGAGTTGAA+AGG | 0.597606 | 2.3:-51935724 | None:intergenic |
AGAAGGCGAAGCTGAAGATG+AGG | 0.600007 | 2.3:+51936113 | MS.gene55149:CDS |
GAAGCAACTCCACCTTCTTG+AGG | 0.601221 | 2.3:-51927461 | None:intergenic |
CACGAGAAACTATGATACCT+CGG | 0.603581 | 2.3:+51935852 | MS.gene55149:CDS |
CAATATATGTTGTCATGGAA+GGG | 0.604158 | 2.3:+51934748 | MS.gene55149:CDS |
GTACAGGTTTGGCGCGTGAA+CGG | 0.605475 | 2.3:+51929962 | MS.gene55149:intron |
CCTTGTATTATACCTCAAGA+AGG | 0.606272 | 2.3:+51927449 | MS.gene55149:CDS |
CCTGAAACTGGGGAATTCTG+GGG | 0.606517 | 2.3:+51927981 | MS.gene55149:CDS |
ACACGGTTGTTTGTATGCAG+AGG | 0.610026 | 2.3:+51927518 | MS.gene55149:CDS |
GTTGCATTATTCCGCATCCA+GGG | 0.613586 | 2.3:+51931119 | MS.gene55149:CDS |
ACTAGACCTTCCTCCATACG+TGG | 0.613657 | 2.3:-51935570 | None:intergenic |
TCAATTACTCGAATTATCTG+GGG | 0.614977 | 2.3:-51929402 | None:intergenic |
TGTTTACCTTTAACTGACCG+AGG | 0.615991 | 2.3:-51935869 | None:intergenic |
GACAAGGAGAATTCGGTGAG+CGG | 0.616082 | 2.3:+51936054 | MS.gene55149:CDS |
ATAGTTTCTCGTGCAGAAGG+TGG | 0.618217 | 2.3:-51935842 | None:intergenic |
AGGACTAACAGACATGCTAC+GGG | 0.618333 | 2.3:-51935624 | None:intergenic |
ATTAAGGATACCTACCATGA+GGG | 0.621121 | 2.3:+51927831 | MS.gene55149:CDS |
GTTCAGTATCGGGAAGTACA+GGG | 0.622918 | 2.3:+51927392 | MS.gene55149:CDS |
ACATGTTGTACATGTCAAAG+AGG | 0.624505 | 2.3:+51927544 | MS.gene55149:CDS |
AATGGCTGATCCTGAAACTG+GGG | 0.624892 | 2.3:+51927971 | MS.gene55149:CDS |
ACGTCAAGGAGTAAATGTCA+AGG | 0.628911 | 2.3:+51929654 | MS.gene55149:CDS |
CTCGCATTTCCCCTCATGGT+AGG | 0.630514 | 2.3:-51927841 | None:intergenic |
ATTTACAATCAAAACCACAA+AGG | 0.632843 | 2.3:+51931855 | MS.gene55149:CDS |
GGCGAAGCTGAAGATGAGGA+AGG | 0.634058 | 2.3:+51936117 | MS.gene55149:CDS |
GAACACCCACGTATGGAGGA+AGG | 0.634412 | 2.3:+51935564 | MS.gene55149:CDS |
CATTGATGTAACTAAAAGAG+AGG | 0.637052 | 2.3:+51936197 | MS.gene55149:CDS |
CAATCAAAACCACAAAGGGA+AGG | 0.637162 | 2.3:+51931860 | MS.gene55149:CDS |
CGTCAAGGAGTAAATGTCAA+GGG | 0.639535 | 2.3:+51929655 | MS.gene55149:CDS |
GCTGCTACTTTCGAGAGCCC+CGG | 0.641229 | 2.3:+51935692 | MS.gene55149:CDS |
TACCAGAGACAATAGATCAG+TGG | 0.641465 | 2.3:-51932137 | None:intergenic |
TGTATTATACCTCAAGAAGG+TGG | 0.646499 | 2.3:+51927452 | MS.gene55149:CDS |
GTAGCACTCCTGAAACGTCA+AGG | 0.647028 | 2.3:+51929640 | MS.gene55149:intron |
CAGTCAAAAGATTAGTAGGG+AGG | 0.650775 | 2.3:+51931934 | MS.gene55149:CDS |
GAAATGTGCCTTACATCCAA+TGG | 0.653886 | 2.3:-51934960 | None:intergenic |
GAGATACTACAACTTCTCCC+AGG | 0.655622 | 2.3:+51934334 | MS.gene55149:CDS |
GGGACAGGCAGAACCCGTTG+AGG | 0.658697 | 2.3:+51929118 | MS.gene55149:CDS |
AAGACCAGGAACTTATAGAG+AGG | 0.660282 | 2.3:+51931396 | MS.gene55149:CDS |
GAGCTGGATGCAGCTCTCGG+AGG | 0.665227 | 2.3:+51927362 | MS.gene55149:CDS |
AAACTGCAACAAAATAGGTG+AGG | 0.665492 | 2.3:-51931968 | None:intergenic |
GATAGGAAAGAACAGTGTTG+AGG | 0.666799 | 2.3:+51930102 | MS.gene55149:CDS |
TTCAGATACAGTTACATCAG+GGG | 0.671783 | 2.3:-51929475 | None:intergenic |
TTAAGGATACCTACCATGAG+GGG | 0.677686 | 2.3:+51927832 | MS.gene55149:CDS |
AAATAACAGGAGTTAGTCAG+TGG | 0.680430 | 2.3:+51929363 | MS.gene55149:intron |
GCAGGCACTCACGATTGGCG+AGG | 0.682122 | 2.3:+51934448 | MS.gene55149:CDS |
TCCTGATGAGACATACAATG+AGG | 0.684855 | 2.3:+51931091 | MS.gene55149:CDS |
TATTAAGGATACCTACCATG+AGG | 0.687526 | 2.3:+51927830 | MS.gene55149:CDS |
TTGAAAGGTTCCTACCGCCG+GGG | 0.687655 | 2.3:-51935709 | None:intergenic |
ACTAACAGACATGCTACGGG+AGG | 0.691587 | 2.3:-51935621 | None:intergenic |
ACGACTGTCTCATTGGAACG+TGG | 0.703301 | 2.3:+51930080 | MS.gene55149:CDS |
GTTTACCTTTAAGATCACGT+AGG | 0.709002 | 2.3:-51926347 | None:intergenic |
GCTACTTTCGAGAGCCCCGG+CGG | 0.718614 | 2.3:+51935695 | MS.gene55149:CDS |
CTAGACCTTCCTCCATACGT+GGG | 0.719164 | 2.3:-51935569 | None:intergenic |
ACTGTATCTGAAGATGGACG+TGG | 0.748883 | 2.3:+51929486 | MS.gene55149:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 51926264 | 51936218 | 51926264 | ID=MS.gene55149 |
chr2.3 | mRNA | 51926264 | 51936218 | 51926264 | ID=MS.gene55149.t1;Parent=MS.gene55149 |
chr2.3 | exon | 51926264 | 51926363 | 51926264 | ID=MS.gene55149.t1.exon1;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51926264 | 51926363 | 51926264 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51927156 | 51927224 | 51927156 | ID=MS.gene55149.t1.exon2;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51927156 | 51927224 | 51927156 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51927329 | 51927565 | 51927329 | ID=MS.gene55149.t1.exon3;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51927329 | 51927565 | 51927329 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51927699 | 51927876 | 51927699 | ID=MS.gene55149.t1.exon4;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51927699 | 51927876 | 51927699 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51927958 | 51928090 | 51927958 | ID=MS.gene55149.t1.exon5;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51927958 | 51928090 | 51927958 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51929109 | 51929271 | 51929109 | ID=MS.gene55149.t1.exon6;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51929109 | 51929271 | 51929109 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51929372 | 51929519 | 51929372 | ID=MS.gene55149.t1.exon7;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51929372 | 51929519 | 51929372 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51929644 | 51929744 | 51929644 | ID=MS.gene55149.t1.exon8;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51929644 | 51929744 | 51929644 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51929968 | 51930123 | 51929968 | ID=MS.gene55149.t1.exon9;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51929968 | 51930123 | 51929968 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51930720 | 51930788 | 51930720 | ID=MS.gene55149.t1.exon10;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51930720 | 51930788 | 51930720 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51930890 | 51930958 | 51930890 | ID=MS.gene55149.t1.exon11;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51930890 | 51930958 | 51930890 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51931044 | 51931181 | 51931044 | ID=MS.gene55149.t1.exon12;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51931044 | 51931181 | 51931044 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51931308 | 51931436 | 51931308 | ID=MS.gene55149.t1.exon13;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51931308 | 51931436 | 51931308 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51931851 | 51931998 | 51931851 | ID=MS.gene55149.t1.exon14;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51931851 | 51931998 | 51931851 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51932116 | 51932149 | 51932116 | ID=MS.gene55149.t1.exon15;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51932116 | 51932149 | 51932116 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51934328 | 51934469 | 51934328 | ID=MS.gene55149.t1.exon16;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51934328 | 51934469 | 51934328 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51934699 | 51934824 | 51934699 | ID=MS.gene55149.t1.exon17;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51934699 | 51934824 | 51934699 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51934903 | 51934968 | 51934903 | ID=MS.gene55149.t1.exon18;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51934903 | 51934968 | 51934903 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51935551 | 51935884 | 51935551 | ID=MS.gene55149.t1.exon19;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51935551 | 51935884 | 51935551 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
chr2.3 | exon | 51936016 | 51936218 | 51936016 | ID=MS.gene55149.t1.exon20;Parent=MS.gene55149.t1 |
chr2.3 | CDS | 51936016 | 51936218 | 51936016 | ID=cds.MS.gene55149.t1;Parent=MS.gene55149.t1 |
Gene Sequence |
Protein sequence |