Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55313.t1 | XP_013453809.1 | 99 | 501 | 4 | 1 | 1 | 501 | 5 | 504 | 1.10E-285 | 991.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55313.t1 | G7JWM8 | 99.0 | 501 | 4 | 1 | 1 | 501 | 1 | 500 | 7.9e-286 | 991.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060652 | MS.gene55313 | 0.814372 | 1.59E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55313.t1 | MTR_5g042910 | 99.002 | 501 | 4 | 1 | 1 | 501 | 5 | 504 | 0.0 | 1022 |
| MS.gene55313.t1 | MTR_5g042910 | 99.002 | 501 | 4 | 1 | 1 | 501 | 1 | 500 | 0.0 | 1022 |
| MS.gene55313.t1 | MTR_7g011790 | 50.725 | 552 | 204 | 8 | 14 | 499 | 1 | 550 | 0.0 | 534 |
| MS.gene55313.t1 | MTR_5g037270 | 43.778 | 450 | 206 | 8 | 85 | 492 | 38 | 482 | 1.26e-112 | 342 |
| MS.gene55313.t1 | MTR_6g009410 | 52.256 | 266 | 127 | 0 | 227 | 492 | 96 | 361 | 2.57e-99 | 303 |
| MS.gene55313.t1 | MTR_6g009410 | 39.655 | 406 | 241 | 2 | 87 | 492 | 37 | 438 | 1.95e-98 | 304 |
| MS.gene55313.t1 | MTR_4g116840 | 26.122 | 245 | 138 | 10 | 244 | 484 | 522 | 727 | 8.77e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55313.t1 | AT1G13970 | 54.753 | 526 | 171 | 11 | 14 | 497 | 1 | 501 | 0.0 | 526 |
| MS.gene55313.t1 | AT3G29180 | 53.247 | 462 | 144 | 6 | 107 | 500 | 51 | 508 | 4.05e-166 | 479 |
| MS.gene55313.t1 | AT3G29180 | 53.247 | 462 | 144 | 6 | 107 | 500 | 51 | 508 | 4.05e-166 | 479 |
| MS.gene55313.t1 | AT3G29180 | 53.247 | 462 | 144 | 6 | 107 | 500 | 51 | 508 | 4.05e-166 | 479 |
| MS.gene55313.t1 | AT5G39430 | 51.134 | 485 | 162 | 7 | 85 | 500 | 27 | 505 | 1.26e-154 | 450 |
| MS.gene55313.t1 | AT1G59650 | 59.559 | 272 | 109 | 1 | 222 | 492 | 214 | 485 | 4.79e-118 | 356 |
| MS.gene55313.t1 | AT1G10410 | 51.877 | 293 | 141 | 0 | 200 | 492 | 188 | 480 | 1.68e-106 | 326 |
Find 114 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCAACACCAATTCTTTA+AGG | 0.142848 | 5.2:+32412725 | MS.gene55313:CDS |
| TACTGGAGTAACTGAGTATT+TGG | 0.157211 | 5.2:-32411028 | None:intergenic |
| TAGAGAAAGACTCAAAATTT+TGG | 0.181148 | 5.2:+32412614 | MS.gene55313:CDS |
| CATTGGTATCTATTTGACTA+TGG | 0.304264 | 5.2:-32410115 | None:intergenic |
| GATGAGATGGAAAAGGTTAA+AGG | 0.325650 | 5.2:+32412564 | MS.gene55313:CDS |
| TCATCCTGCTATGTAGATTC+AGG | 0.332131 | 5.2:+32411058 | MS.gene55313:CDS |
| TGACCCTTGCTCTTCCCATT+TGG | 0.338669 | 5.2:-32409879 | None:intergenic |
| TCAACACCAATTGGTTTGTA+AGG | 0.339629 | 5.2:-32411823 | None:intergenic |
| TGGTCAAATTCCTACCATTA+TGG | 0.345688 | 5.2:+32414115 | MS.gene55313:CDS |
| TTGTATATACCTTAAAGAAT+TGG | 0.357864 | 5.2:-32412734 | None:intergenic |
| GCAATGTGATTTATCTTCCT+TGG | 0.359342 | 5.2:-32411859 | None:intergenic |
| AAAAGGCATTCCCTGGTTCC+TGG | 0.378446 | 5.2:+32411548 | MS.gene55313:CDS |
| GGTTTGTAAGGGCAGACATC+TGG | 0.386041 | 5.2:-32411811 | None:intergenic |
| GAACTCAGATTAAGGTCTTC+CGG | 0.386301 | 5.2:-32412651 | None:intergenic |
| ACAAATAAATCAACACCAAT+TGG | 0.393642 | 5.2:-32411832 | None:intergenic |
| ACTACTCATTGTAAATATAC+AGG | 0.401763 | 5.2:+32411930 | MS.gene55313:CDS |
| ATGAGTAGTGAAGGTACATT+TGG | 0.407414 | 5.2:-32411916 | None:intergenic |
| AAAAGAAGGAGTCATAAATC+TGG | 0.410525 | 5.2:+32409903 | MS.gene55313:CDS |
| TCTCTGCAGAACTCAGATTA+AGG | 0.418630 | 5.2:-32412659 | None:intergenic |
| TTCCAGAGTTGCCATTGAAA+AGG | 0.421683 | 5.2:+32409955 | MS.gene55313:CDS |
| GATGACTTCAGTAGTGTTCA+TGG | 0.422593 | 5.2:+32410864 | MS.gene55313:CDS |
| TTTCTTTATCGTCCGAGAGC+AGG | 0.427390 | 5.2:+32411499 | MS.gene55313:CDS |
| TCCTGTTTCAACTCAAGAAA+AGG | 0.430813 | 5.2:+32411531 | MS.gene55313:CDS |
| ATTTCCCATGGCGTTGCCGC+TGG | 0.431870 | 5.2:-32411002 | None:intergenic |
| TTTGTCTTCAAGAGCCATAA+TGG | 0.456248 | 5.2:-32414129 | None:intergenic |
| ATGAAAACCAAAATGTTGGC+TGG | 0.456829 | 5.2:+32409807 | None:intergenic |
| TTGAAAAGGGTTAGCAATGC+AGG | 0.457507 | 5.2:+32409969 | MS.gene55313:CDS |
| AGGTCTATCTCAAAGTAGTT+AGG | 0.458243 | 5.2:-32413486 | None:intergenic |
| AGTTGTGGTTCAAAACCAAA+TGG | 0.458980 | 5.2:+32409864 | MS.gene55313:CDS |
| AGCAGGATGAACTTTCATAC+TGG | 0.460053 | 5.2:-32411045 | None:intergenic |
| ATTGGTTTGACAGAGATTAG+TGG | 0.462765 | 5.2:+32412539 | MS.gene55313:intron |
| TCCAGAGTTGCCATTGAAAA+GGG | 0.466355 | 5.2:+32409956 | MS.gene55313:CDS |
| CTTCGAGACCGTGTAAAGAA+TGG | 0.470132 | 5.2:+32413555 | MS.gene55313:CDS |
| TTTCGCCAGCGGCAACGCCA+TGG | 0.474812 | 5.2:+32410997 | MS.gene55313:CDS |
| TATCCTGCTAGCATGTTCAT+TGG | 0.475103 | 5.2:+32412089 | MS.gene55313:CDS |
| CTCCATTCTTATCTATCTTG+AGG | 0.475536 | 5.2:-32411111 | None:intergenic |
| AAGAATGGAATACTTGATGT+TGG | 0.478006 | 5.2:+32413570 | MS.gene55313:CDS |
| ATGAGATGGAAAAGGTTAAA+GGG | 0.481261 | 5.2:+32412565 | MS.gene55313:CDS |
| TTCTTTATCGTCCGAGAGCA+GGG | 0.483123 | 5.2:+32411500 | MS.gene55313:CDS |
| AAGTTAGCTTCTACCACAAT+GGG | 0.484343 | 5.2:+32409840 | MS.gene55313:CDS |
| TCCTCGATATATAGCTAAAA+CGG | 0.484530 | 5.2:-32413518 | None:intergenic |
| ACTGGAGTAACTGAGTATTT+GGG | 0.484825 | 5.2:-32411027 | None:intergenic |
| GTCTGCCCTTACAAACCAAT+TGG | 0.485570 | 5.2:+32411817 | MS.gene55313:CDS |
| TCTCAGTGAATTTGTTCACC+TGG | 0.488032 | 5.2:+32410013 | MS.gene55313:CDS |
| GTTGTCAGAGAATTTCGAAA+AGG | 0.488281 | 5.2:+32412154 | MS.gene55313:CDS |
| TTTGACTATGGTATTGAACC+TGG | 0.496024 | 5.2:-32410103 | None:intergenic |
| ACTGAAGTCATCATCTGAAT+CGG | 0.496214 | 5.2:-32410853 | None:intergenic |
| TTTGGCTGGAGTAGTTAATC+CGG | 0.496798 | 5.2:+32412632 | MS.gene55313:CDS |
| GAAATTACAGACCAGGAACC+AGG | 0.499193 | 5.2:-32411559 | None:intergenic |
| AGAGCAAGGGTCACAAAAGA+AGG | 0.502944 | 5.2:+32409889 | MS.gene55313:CDS |
| TTCGCCAGCGGCAACGCCAT+GGG | 0.506780 | 5.2:+32410998 | MS.gene55313:CDS |
| ATTGGTGATGCCAATGGAGA+AGG | 0.509060 | 5.2:+32412107 | MS.gene55313:CDS |
| AAGGCTCAAGCCTTCTCCAT+TGG | 0.510156 | 5.2:-32412117 | None:intergenic |
| AGTCAAACCATGCATCCTCT+TGG | 0.515815 | 5.2:-32410809 | None:intergenic |
| TTGATTTATTTGTGAGTCCA+AGG | 0.519202 | 5.2:+32411842 | MS.gene55313:CDS |
| AAGCAGCACAACACTTGCTC+AGG | 0.519810 | 5.2:-32414062 | None:intergenic |
| TTTACAGGCACAAAAGGAAG+AGG | 0.525168 | 5.2:+32414034 | MS.gene55313:intron |
| GTGTTGAGGACGCGAAAGCA+CGG | 0.533305 | 5.2:-32412712 | None:intergenic |
| CATCCTGCTATGTAGATTCA+GGG | 0.534072 | 5.2:+32411059 | MS.gene55313:CDS |
| AGATTCAGGGTGCAAATATG+AGG | 0.535593 | 5.2:+32411072 | MS.gene55313:CDS |
| AGTGGATGATGAGATGGAAA+AGG | 0.536497 | 5.2:+32412557 | MS.gene55313:CDS |
| TGATGTTGGATTAACTATCC+AGG | 0.538342 | 5.2:+32413584 | MS.gene55313:CDS |
| GCACCCTGAATCTACATAGC+AGG | 0.539585 | 5.2:-32411062 | None:intergenic |
| ACTCAAGAAAAGGCATTCCC+TGG | 0.539875 | 5.2:+32411541 | MS.gene55313:CDS |
| GAGATTAGTGGATGATGAGA+TGG | 0.540497 | 5.2:+32412551 | MS.gene55313:intron |
| TGTTGAGGACGCGAAAGCAC+GGG | 0.543844 | 5.2:-32412711 | None:intergenic |
| TCACCAATGAACATGCTAGC+AGG | 0.549372 | 5.2:-32412092 | None:intergenic |
| TTAGCTATATATCGAGGAAG+GGG | 0.550913 | 5.2:+32413523 | MS.gene55313:CDS |
| ATGGCGTTGCCGCTGGCGAA+AGG | 0.551383 | 5.2:-32410995 | None:intergenic |
| TTTGGATGTTCACCGACACT+TGG | 0.551399 | 5.2:-32411898 | None:intergenic |
| CAACACCAATTGGTTTGTAA+GGG | 0.551510 | 5.2:-32411822 | None:intergenic |
| AACCACCTTTGTCAAAATCC+AGG | 0.552169 | 5.2:-32410031 | None:intergenic |
| TGAAACCTCTGATCTCCTAC+AGG | 0.552393 | 5.2:-32410060 | None:intergenic |
| CAAGTATTCCATTCTTTACA+CGG | 0.563804 | 5.2:-32413563 | None:intergenic |
| GTTGTGGTTCAAAACCAAAT+GGG | 0.565547 | 5.2:+32409865 | MS.gene55313:CDS |
| CTGCGGAGCTTGAACACAGA+AGG | 0.573510 | 5.2:-32411583 | None:intergenic |
| TCTTCAAGAGCCATAATGGT+AGG | 0.575430 | 5.2:-32414125 | None:intergenic |
| TAAGGGCAGACATCTGGAGC+AGG | 0.575624 | 5.2:-32411805 | None:intergenic |
| GGAACTTGAATCCCTGCTCT+CGG | 0.580821 | 5.2:-32411511 | None:intergenic |
| GAAGTTAGCTTCTACCACAA+TGG | 0.581341 | 5.2:+32409839 | MS.gene55313:CDS |
| TACCTCAAGATAGATAAGAA+TGG | 0.583166 | 5.2:+32411109 | MS.gene55313:CDS |
| TTTAGCTATATATCGAGGAA+GGG | 0.587005 | 5.2:+32413522 | MS.gene55313:CDS |
| GAGTATACCAAGAGGATGCA+TGG | 0.588884 | 5.2:+32410802 | MS.gene55313:CDS |
| TTGACTATGGTATTGAACCT+GGG | 0.589577 | 5.2:-32410102 | None:intergenic |
| TTTATGTAGAGATAAGCAAA+AGG | 0.589636 | 5.2:+32411780 | MS.gene55313:intron |
| ACCTTAAAGAATTGGTGTTG+AGG | 0.589868 | 5.2:-32412726 | None:intergenic |
| AGTATTTGGGACATTTCCCA+TGG | 0.591513 | 5.2:-32411014 | None:intergenic |
| AAAACCAAATGGGAAGAGCA+AGG | 0.596794 | 5.2:+32409875 | MS.gene55313:CDS |
| AACATGCTAGCAGGATATGT+AGG | 0.599426 | 5.2:-32412083 | None:intergenic |
| AAACCAAATGGGAAGAGCAA+GGG | 0.607442 | 5.2:+32409876 | MS.gene55313:CDS |
| CATATTGAACTTCCAAGTGT+CGG | 0.612685 | 5.2:+32411886 | MS.gene55313:CDS |
| TGTCAAGTTTCATCTTACCC+AGG | 0.615127 | 5.2:+32410085 | MS.gene55313:CDS |
| AGCTAAAACGGTGTATGTCG+AGG | 0.615162 | 5.2:-32413506 | None:intergenic |
| GGCTGCCTGTAGGAGATCAG+AGG | 0.619461 | 5.2:+32410055 | MS.gene55313:CDS |
| TCTACCACAATGGGAAGTTG+TGG | 0.627755 | 5.2:+32409849 | MS.gene55313:CDS |
| CATAGTCAAATAGATACCAA+TGG | 0.629508 | 5.2:+32410116 | MS.gene55313:CDS |
| ATGTTCATTGGTGATGCCAA+TGG | 0.630081 | 5.2:+32412101 | MS.gene55313:CDS |
| AGAAGGCGAAATTACAGACC+AGG | 0.634925 | 5.2:-32411566 | None:intergenic |
| AAACTTATACATGCTTACAA+TGG | 0.638264 | 5.2:+32412684 | MS.gene55313:CDS |
| ATATTTACAATGAGTAGTGA+AGG | 0.641644 | 5.2:-32411925 | None:intergenic |
| AAGGTGGTTCGGCTGCCTGT+AGG | 0.648103 | 5.2:+32410045 | MS.gene55313:CDS |
| TAATGGTAGGAATTTGACCA+TGG | 0.659554 | 5.2:-32414112 | None:intergenic |
| TGAACCACAACTTCCCATTG+TGG | 0.662536 | 5.2:-32409853 | None:intergenic |
| AAAGGTTAAAGGGTACGCAA+AGG | 0.665305 | 5.2:+32412575 | MS.gene55313:CDS |
| AGCAATGCAGGAAACCGCGT+GGG | 0.670211 | 5.2:+32409981 | MS.gene55313:CDS |
| TTGATCTTATCCTGAAAACA+CGG | 0.670425 | 5.2:-32412185 | None:intergenic |
| AAATTACAGACCAGGAACCA+GGG | 0.679337 | 5.2:-32411558 | None:intergenic |
| TGGCAACTCTGGAAGCGCAG+AGG | 0.680202 | 5.2:-32409946 | None:intergenic |
| CATAAATCTGGAAAGCGCAG+AGG | 0.689757 | 5.2:+32409915 | MS.gene55313:CDS |
| ACAACTTAAAATATAGCACA+AGG | 0.696980 | 5.2:-32412136 | None:intergenic |
| TAGCAATGCAGGAAACCGCG+TGG | 0.700351 | 5.2:+32409980 | MS.gene55313:CDS |
| TTAATCTGAGTTCTGCAGAG+AGG | 0.720842 | 5.2:+32412661 | MS.gene55313:CDS |
| TGAGATTAAAATCTCCCACG+CGG | 0.794497 | 5.2:-32409995 | None:intergenic |
| GACTTCAGTAGTGTTCATGG+AGG | 0.803341 | 5.2:+32410867 | MS.gene55313:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTTTAATAAAAAGTAA+TGG | - | chr5.2:32413865-32413884 | None:intergenic | 10.0% |
| !! | TTTATTTATATATTCCTTTA+TGG | + | chr5.2:32410956-32410975 | MS.gene55313:intron | 10.0% |
| !!! | ATAATTTTTTCTTAAAATTC+TGG | - | chr5.2:32412519-32412538 | None:intergenic | 10.0% |
| !!! | ATTAATGTATTTTAAATACA+GGG | + | chr5.2:32413462-32413481 | MS.gene55313:intron | 10.0% |
| !!! | TATTAATGTATTTTAAATAC+AGG | + | chr5.2:32413461-32413480 | MS.gene55313:intron | 10.0% |
| !! | AAAATTTGTGATTTCATTAT+TGG | + | chr5.2:32410705-32410724 | MS.gene55313:intron | 15.0% |
| !! | AATAACTTAAGAAAAAAGAA+GGG | - | chr5.2:32412334-32412353 | None:intergenic | 15.0% |
| !! | TAATAACTTAAGAAAAAAGA+AGG | - | chr5.2:32412335-32412354 | None:intergenic | 15.0% |
| !! | TTGATTACATAATTTAATCA+CGG | + | chr5.2:32412043-32412062 | MS.gene55313:intron | 15.0% |
| !!! | AAACTCATTTTAAATTATGT+AGG | - | chr5.2:32413292-32413311 | None:intergenic | 15.0% |
| !!! | ATTTTTCAACATTTTCAAAT+AGG | - | chr5.2:32412024-32412043 | None:intergenic | 15.0% |
| !!! | CATATATAAATACCAATTTT+TGG | - | chr5.2:32411753-32411772 | None:intergenic | 15.0% |
| !!! | GTTATTTTTGTATTCAATTT+TGG | + | chr5.2:32412967-32412986 | MS.gene55313:intron | 15.0% |
| !! | AAAACTAAAAATAACACCAA+AGG | - | chr5.2:32410155-32410174 | None:intergenic | 20.0% |
| !! | ATACAAATTTATGTCTTGAT+TGG | + | chr5.2:32412751-32412770 | MS.gene55313:intron | 20.0% |
| !! | CAACTATTATAAGTTTATAG+TGG | - | chr5.2:32413317-32413336 | None:intergenic | 20.0% |
| !! | CCTGTAAAAACATAAATTTA+GGG | - | chr5.2:32414022-32414041 | None:intergenic | 20.0% |
| !! | TGATGTAACTCTTAATAATT+CGG | - | chr5.2:32411446-32411465 | None:intergenic | 20.0% |
| !! | TTCAAACAAGTAAATATTGA+TGG | - | chr5.2:32412228-32412247 | None:intergenic | 20.0% |
| !! | TTGATAAAACTTATTAATCC+CGG | - | chr5.2:32413902-32413921 | None:intergenic | 20.0% |
| !! | TTGTATATACCTTAAAGAAT+TGG | - | chr5.2:32412737-32412756 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTTGTTAACCA+TGG | + | chr5.2:32414095-32414114 | MS.gene55313:CDS | 20.0% |
| !!! | TATTCAATTCAGTTTTGTTA+TGG | + | chr5.2:32411977-32411996 | MS.gene55313:intron | 20.0% |
| ! | AAAATACAAAGTTGAAACGT+GGG | - | chr5.2:32410341-32410360 | None:intergenic | 25.0% |
| ! | AAACTTATACATGCTTACAA+TGG | + | chr5.2:32412684-32412703 | MS.gene55313:CDS | 25.0% |
| ! | AAATTAAACTCGCATAGTTA+TGG | + | chr5.2:32412943-32412962 | MS.gene55313:intron | 25.0% |
| ! | AATAGCATATGAACTTATAG+CGG | - | chr5.2:32413824-32413843 | None:intergenic | 25.0% |
| ! | ACAAATAAATCAACACCAAT+TGG | - | chr5.2:32411835-32411854 | None:intergenic | 25.0% |
| ! | ACAACTTAAAATATAGCACA+AGG | - | chr5.2:32412139-32412158 | None:intergenic | 25.0% |
| ! | ACTACTCATTGTAAATATAC+AGG | + | chr5.2:32411930-32411949 | MS.gene55313:CDS | 25.0% |
| ! | AGTAAGTTATGTTAACTCTA+AGG | - | chr5.2:32410745-32410764 | None:intergenic | 25.0% |
| ! | ATATTTACAATGAGTAGTGA+AGG | - | chr5.2:32411928-32411947 | None:intergenic | 25.0% |
| ! | GCCTGTAAAAACATAAATTT+AGG | - | chr5.2:32414023-32414042 | None:intergenic | 25.0% |
| ! | GTAAGTTATGTTAACTCTAA+GGG | - | chr5.2:32410744-32410763 | None:intergenic | 25.0% |
| ! | GTTCATTTACTTCCAAAAAT+TGG | + | chr5.2:32411738-32411757 | MS.gene55313:intron | 25.0% |
| ! | TAATAATGTGTGAAATCACA+TGG | - | chr5.2:32413446-32413465 | None:intergenic | 25.0% |
| ! | TAATGCAAACAATACAATGT+CGG | - | chr5.2:32410622-32410641 | None:intergenic | 25.0% |
| ! | TAGTCAAAGAAACAATTGTT+TGG | - | chr5.2:32410434-32410453 | None:intergenic | 25.0% |
| ! | TGAATCTGATTATTCAGAAA+GGG | + | chr5.2:32413028-32413047 | MS.gene55313:intron | 25.0% |
| ! | TGTCATTATCTTGTCAAAAA+AGG | - | chr5.2:32410228-32410247 | None:intergenic | 25.0% |
| ! | TGTTAAAGCCTAAAAACATT+AGG | + | chr5.2:32411396-32411415 | MS.gene55313:intron | 25.0% |
| ! | TTATAGATATGACAACACTA+GGG | + | chr5.2:32412990-32413009 | MS.gene55313:intron | 25.0% |
| ! | TTATTAGTGTATACGTGTTA+TGG | + | chr5.2:32412352-32412371 | MS.gene55313:intron | 25.0% |
| ! | TTGAATCTGATTATTCAGAA+AGG | + | chr5.2:32413027-32413046 | MS.gene55313:intron | 25.0% |
| ! | TTTATGTAGAGATAAGCAAA+AGG | + | chr5.2:32411780-32411799 | MS.gene55313:intron | 25.0% |
| ! | TTTGTGATTTCATTATTGGA+AGG | + | chr5.2:32410709-32410728 | MS.gene55313:intron | 25.0% |
| !! | AATTGTATGATTTTCCTTTC+AGG | + | chr5.2:32411238-32411257 | MS.gene55313:intron | 25.0% |
| !! | ATGAACTTCCTAATGTTTTT+AGG | - | chr5.2:32411407-32411426 | None:intergenic | 25.0% |
| !! | TAGAGAAAGACTCAAAATTT+TGG | + | chr5.2:32412614-32412633 | MS.gene55313:CDS | 25.0% |
| !! | TTCATAGGTTGAAAATTCTA+GGG | + | chr5.2:32412400-32412419 | MS.gene55313:intron | 25.0% |
| !! | TTTTCATTGAAATTTCGTCA+AGG | + | chr5.2:32411271-32411290 | MS.gene55313:intron | 25.0% |
| !!! | AATTTTGAGTCTTTCTCTAA+AGG | - | chr5.2:32412613-32412632 | None:intergenic | 25.0% |
| !!! | ATTTTGAGTCTTTCTCTAAA+GGG | - | chr5.2:32412612-32412631 | None:intergenic | 25.0% |
| !!! | CCCTAAATTTATGTTTTTAC+AGG | + | chr5.2:32414019-32414038 | MS.gene55313:intron | 25.0% |
| !!! | TCACTTTTATACAATTTGCA+TGG | + | chr5.2:32410503-32410522 | MS.gene55313:intron | 25.0% |
| AAAAAAATGCAAGACCTGAA+AGG | - | chr5.2:32411255-32411274 | None:intergenic | 30.0% | |
| AAAAGAAGGAGTCATAAATC+TGG | + | chr5.2:32409903-32409922 | MS.gene55313:CDS | 30.0% | |
| AAGAATGGAATACTTGATGT+TGG | + | chr5.2:32413570-32413589 | MS.gene55313:CDS | 30.0% | |
| AATGGTTCAAATCAACTTTG+AGG | + | chr5.2:32413073-32413092 | MS.gene55313:intron | 30.0% | |
| ACTTCAAACTAACGATTTCA+AGG | - | chr5.2:32413621-32413640 | None:intergenic | 30.0% | |
| ATGAGATGGAAAAGGTTAAA+GGG | + | chr5.2:32412565-32412584 | MS.gene55313:CDS | 30.0% | |
| CAAAATACAAAGTTGAAACG+TGG | - | chr5.2:32410342-32410361 | None:intergenic | 30.0% | |
| CAAGTATTCCATTCTTTACA+CGG | - | chr5.2:32413566-32413585 | None:intergenic | 30.0% | |
| CATAGTCAAATAGATACCAA+TGG | + | chr5.2:32410116-32410135 | MS.gene55313:CDS | 30.0% | |
| CATTGGTATCTATTTGACTA+TGG | - | chr5.2:32410118-32410137 | None:intergenic | 30.0% | |
| GAATCTGATTATTCAGAAAG+GGG | + | chr5.2:32413029-32413048 | MS.gene55313:intron | 30.0% | |
| GAATGACATACATAAATCGT+TGG | - | chr5.2:32411298-32411317 | None:intergenic | 30.0% | |
| GATAATGACAATGAACTTGT+TGG | + | chr5.2:32410238-32410257 | MS.gene55313:intron | 30.0% | |
| GTTATAGATATGACAACACT+AGG | + | chr5.2:32412989-32413008 | MS.gene55313:intron | 30.0% | |
| TACCTCAAGATAGATAAGAA+TGG | + | chr5.2:32411109-32411128 | MS.gene55313:CDS | 30.0% | |
| TCAATAATGAATCGTTGAAC+AGG | + | chr5.2:32411463-32411482 | MS.gene55313:intron | 30.0% | |
| TCCTCGATATATAGCTAAAA+CGG | - | chr5.2:32413521-32413540 | None:intergenic | 30.0% | |
| TCTAATGAGAATGTCATGTT+AGG | - | chr5.2:32412446-32412465 | None:intergenic | 30.0% | |
| TTGATCTTATCCTGAAAACA+CGG | - | chr5.2:32412188-32412207 | None:intergenic | 30.0% | |
| TTGATTTATTTGTGAGTCCA+AGG | + | chr5.2:32411842-32411861 | MS.gene55313:CDS | 30.0% | |
| TTTAGCTATATATCGAGGAA+GGG | + | chr5.2:32413522-32413541 | MS.gene55313:CDS | 30.0% | |
| ! | CTTAGAATCTGATTTTTGCA+TGG | + | chr5.2:32413169-32413188 | MS.gene55313:intron | 30.0% |
| ! | CTTCATAGGTTGAAAATTCT+AGG | + | chr5.2:32412399-32412418 | MS.gene55313:intron | 30.0% |
| !! | AACTATTAGATAACTTGCTC+AGG | - | chr5.2:32413395-32413414 | None:intergenic | 30.0% |
| !! | ACAATGAACTTGTTGGATTT+CGG | + | chr5.2:32410245-32410264 | MS.gene55313:intron | 30.0% |
| !! | GTGATTCTTTGATTTTACAC+TGG | + | chr5.2:32412910-32412929 | MS.gene55313:intron | 30.0% |
| !! | TATGTTTTTACAGGCACAAA+AGG | + | chr5.2:32414028-32414047 | MS.gene55313:intron | 30.0% |
| !! | TTGTTAATTCAGTTCTAGAG+AGG | + | chr5.2:32413684-32413703 | MS.gene55313:intron | 30.0% |
| !! | TTTTAGCTATATATCGAGGA+AGG | + | chr5.2:32413521-32413540 | MS.gene55313:CDS | 30.0% |
| !!! | TAGGGTACATTTTTTGAAGT+TGG | + | chr5.2:32412418-32412437 | MS.gene55313:intron | 30.0% |
| AAATTAAACCTTGCATGTCC+GGG | + | chr5.2:32413881-32413900 | MS.gene55313:intron | 35.0% | |
| AACAATACAATGTCGGAATG+TGG | - | chr5.2:32410615-32410634 | None:intergenic | 35.0% | |
| ACGACTGTGTCAATGTTATT+CGG | - | chr5.2:32411715-32411734 | None:intergenic | 35.0% | |
| ACTCCTTCTATGTGAATTGT+CGG | - | chr5.2:32411660-32411679 | None:intergenic | 35.0% | |
| ACTGAAGTCATCATCTGAAT+CGG | - | chr5.2:32410856-32410875 | None:intergenic | 35.0% | |
| ACTGGAGTAACTGAGTATTT+GGG | - | chr5.2:32411030-32411049 | None:intergenic | 35.0% | |
| AGGAGCAAAAAAGTTACCAT+TGG | - | chr5.2:32410135-32410154 | None:intergenic | 35.0% | |
| AGGTCTATCTCAAAGTAGTT+AGG | - | chr5.2:32413489-32413508 | None:intergenic | 35.0% | |
| AGTTGTGGTTCAAAACCAAA+TGG | + | chr5.2:32409864-32409883 | MS.gene55313:CDS | 35.0% | |
| ATCGATTAGACAATCCAGAT+CGG | - | chr5.2:32410579-32410598 | None:intergenic | 35.0% | |
| ATTTACCAAAGTTGGAACGT+GGG | + | chr5.2:32410367-32410386 | MS.gene55313:intron | 35.0% | |
| ATTTGCATGGAAATAGCAAG+AGG | + | chr5.2:32410516-32410535 | MS.gene55313:intron | 35.0% | |
| CAAATTAAACCTTGCATGTC+CGG | + | chr5.2:32413880-32413899 | MS.gene55313:intron | 35.0% | |
| CATATTGAACTTCCAAGTGT+CGG | + | chr5.2:32411886-32411905 | MS.gene55313:CDS | 35.0% | |
| CATGGACAAGAAGAATCATT+CGG | - | chr5.2:32413428-32413447 | None:intergenic | 35.0% | |
| CCATCATAACAATATCAGCA+AGG | - | chr5.2:32410182-32410201 | None:intergenic | 35.0% | |
| CCTTGCTGATATTGTTATGA+TGG | + | chr5.2:32410179-32410198 | MS.gene55313:intron | 35.0% | |
| CTCCATTCTTATCTATCTTG+AGG | - | chr5.2:32411114-32411133 | None:intergenic | 35.0% | |
| CTTGTTTATCAAAGAAGCCA+TGG | - | chr5.2:32410479-32410498 | None:intergenic | 35.0% | |
| GATGAGATGGAAAAGGTTAA+AGG | + | chr5.2:32412564-32412583 | MS.gene55313:CDS | 35.0% | |
| GCAATGTGATTTATCTTCCT+TGG | - | chr5.2:32411862-32411881 | None:intergenic | 35.0% | |
| GTTGTCAGAGAATTTCGAAA+AGG | + | chr5.2:32412154-32412173 | MS.gene55313:CDS | 35.0% | |
| GTTGTGGTTCAAAACCAAAT+GGG | + | chr5.2:32409865-32409884 | MS.gene55313:CDS | 35.0% | |
| TAATGGTAGGAATTTGACCA+TGG | - | chr5.2:32414115-32414134 | None:intergenic | 35.0% | |
| TACTGGAGTAACTGAGTATT+TGG | - | chr5.2:32411031-32411050 | None:intergenic | 35.0% | |
| TATTAGCCAATGTGAGACTA+GGG | + | chr5.2:32413931-32413950 | MS.gene55313:intron | 35.0% | |
| TCCTCAACACCAATTCTTTA+AGG | + | chr5.2:32412725-32412744 | MS.gene55313:CDS | 35.0% | |
| TCCTGTTTCAACTCAAGAAA+AGG | + | chr5.2:32411531-32411550 | MS.gene55313:CDS | 35.0% | |
| TGATGTTGGATTAACTATCC+AGG | + | chr5.2:32413584-32413603 | MS.gene55313:CDS | 35.0% | |
| TGGTCAAATTCCTACCATTA+TGG | + | chr5.2:32414115-32414134 | MS.gene55313:CDS | 35.0% | |
| TTAGCTATATATCGAGGAAG+GGG | + | chr5.2:32413523-32413542 | MS.gene55313:CDS | 35.0% | |
| TTCAAGGATCAAACTATACC+TGG | - | chr5.2:32413605-32413624 | None:intergenic | 35.0% | |
| TTGACCTGATTTACCAAAGT+TGG | + | chr5.2:32410359-32410378 | MS.gene55313:intron | 35.0% | |
| TTTGTCTTCAAGAGCCATAA+TGG | - | chr5.2:32414132-32414151 | None:intergenic | 35.0% | |
| ! | AAACTCGTTTTACCATAAGC+TGG | + | chr5.2:32413196-32413215 | MS.gene55313:intron | 35.0% |
| ! | AAGTTAGCTTCTACCACAAT+GGG | + | chr5.2:32409840-32409859 | MS.gene55313:CDS | 35.0% |
| ! | AGTTGATTCAAACCAGCTTA+TGG | - | chr5.2:32413211-32413230 | None:intergenic | 35.0% |
| ! | ATGAGTAGTGAAGGTACATT+TGG | - | chr5.2:32411919-32411938 | None:intergenic | 35.0% |
| ! | ATTTTCAACCTATGAAGCAC+TGG | - | chr5.2:32412396-32412415 | None:intergenic | 35.0% |
| ! | CTATTGACTATGTTGAGCAT+TGG | + | chr5.2:32410911-32410930 | MS.gene55313:intron | 35.0% |
| ! | TTGACTATGGTATTGAACCT+GGG | - | chr5.2:32410105-32410124 | None:intergenic | 35.0% |
| ! | TTTGACTATGGTATTGAACC+TGG | - | chr5.2:32410106-32410125 | None:intergenic | 35.0% |
| !! | AACTTGTTGGATTTCGGATT+TGG | + | chr5.2:32410251-32410270 | MS.gene55313:intron | 35.0% |
| !! | ACCTTAAAGAATTGGTGTTG+AGG | - | chr5.2:32412729-32412748 | None:intergenic | 35.0% |
| !! | ATTGGTTTGACAGAGATTAG+TGG | + | chr5.2:32412539-32412558 | MS.gene55313:intron | 35.0% |
| !! | CAACACCAATTGGTTTGTAA+GGG | - | chr5.2:32411825-32411844 | None:intergenic | 35.0% |
| !! | GAAAGACTCAAAATTTTGGC+TGG | + | chr5.2:32412618-32412637 | MS.gene55313:CDS | 35.0% |
| !! | GTGTTTTCAGGATAAGATCA+AGG | + | chr5.2:32412187-32412206 | MS.gene55313:CDS | 35.0% |
| !! | TCAACACCAATTGGTTTGTA+AGG | - | chr5.2:32411826-32411845 | None:intergenic | 35.0% |
| !!! | ACCGTTTTAGCTATATATCG+AGG | + | chr5.2:32413517-32413536 | MS.gene55313:CDS | 35.0% |
| !!! | GCACTATTCTGTGGTTTTAA+TGG | + | chr5.2:32413055-32413074 | MS.gene55313:intron | 35.0% |
| !!! | TGGTAACTTTTTTGCTCCTT+TGG | + | chr5.2:32410136-32410155 | MS.gene55313:intron | 35.0% |
| AAAACCAAATGGGAAGAGCA+AGG | + | chr5.2:32409875-32409894 | MS.gene55313:CDS | 40.0% | |
| AAACCAAATGGGAAGAGCAA+GGG | + | chr5.2:32409876-32409895 | MS.gene55313:CDS | 40.0% | |
| AAATTACAGACCAGGAACCA+GGG | - | chr5.2:32411561-32411580 | None:intergenic | 40.0% | |
| AACAATCTGCTCGACCATAA+AGG | - | chr5.2:32410973-32410992 | None:intergenic | 40.0% | |
| AACATGCTAGCAGGATATGT+AGG | - | chr5.2:32412086-32412105 | None:intergenic | 40.0% | |
| AACCACCTTTGTCAAAATCC+AGG | - | chr5.2:32410034-32410053 | None:intergenic | 40.0% | |
| AATGTCGGAATGTGGACATT+TGG | - | chr5.2:32410607-32410626 | None:intergenic | 40.0% | |
| ACACTTTCGATCTGAAGAGT+CGG | - | chr5.2:32412281-32412300 | None:intergenic | 40.0% | |
| ACCTGAAAAATGTTTCGCTG+CGG | - | chr5.2:32411603-32411622 | None:intergenic | 40.0% | |
| AGATTCAGGGTGCAAATATG+AGG | + | chr5.2:32411072-32411091 | MS.gene55313:CDS | 40.0% | |
| AGCAGGATGAACTTTCATAC+TGG | - | chr5.2:32411048-32411067 | None:intergenic | 40.0% | |
| AGTGGATGATGAGATGGAAA+AGG | + | chr5.2:32412557-32412576 | MS.gene55313:CDS | 40.0% | |
| ATGAACCGTCTGATCAAGAT+CGG | - | chr5.2:32410671-32410690 | None:intergenic | 40.0% | |
| CATCCTGCTATGTAGATTCA+GGG | + | chr5.2:32411059-32411078 | MS.gene55313:CDS | 40.0% | |
| CGTTCCAACTTTGGTAAATC+AGG | - | chr5.2:32410366-32410385 | None:intergenic | 40.0% | |
| CTATTAGCCAATGTGAGACT+AGG | + | chr5.2:32413930-32413949 | MS.gene55313:intron | 40.0% | |
| GAAAAACCCTAGTCTCACAT+TGG | - | chr5.2:32413940-32413959 | None:intergenic | 40.0% | |
| GAACTCAGATTAAGGTCTTC+CGG | - | chr5.2:32412654-32412673 | None:intergenic | 40.0% | |
| GACAGTTGACATTCAGACTT+TGG | - | chr5.2:32410649-32410668 | None:intergenic | 40.0% | |
| GATGACTTCAGTAGTGTTCA+TGG | + | chr5.2:32410864-32410883 | MS.gene55313:CDS | 40.0% | |
| GATTTACCAAAGTTGGAACG+TGG | + | chr5.2:32410366-32410385 | MS.gene55313:intron | 40.0% | |
| TAGAAGGAGTTTCTGTTGTC+TGG | + | chr5.2:32411670-32411689 | MS.gene55313:intron | 40.0% | |
| TATCCTGCTAGCATGTTCAT+TGG | + | chr5.2:32412089-32412108 | MS.gene55313:CDS | 40.0% | |
| TCATCCTGCTATGTAGATTC+AGG | + | chr5.2:32411058-32411077 | MS.gene55313:CDS | 40.0% | |
| TCCAGAGTTGCCATTGAAAA+GGG | + | chr5.2:32409956-32409975 | MS.gene55313:CDS | 40.0% | |
| TCGATTAGACAATCCAGATC+GGG | - | chr5.2:32410578-32410597 | None:intergenic | 40.0% | |
| TCTCTGCAGAACTCAGATTA+AGG | - | chr5.2:32412662-32412681 | None:intergenic | 40.0% | |
| TCTTCAAGAGCCATAATGGT+AGG | - | chr5.2:32414128-32414147 | None:intergenic | 40.0% | |
| TGAGATTAAAATCTCCCACG+CGG | - | chr5.2:32409998-32410017 | None:intergenic | 40.0% | |
| TGTCAAGTTTCATCTTACCC+AGG | + | chr5.2:32410085-32410104 | MS.gene55313:CDS | 40.0% | |
| TTAATCTGAGTTCTGCAGAG+AGG | + | chr5.2:32412661-32412680 | MS.gene55313:CDS | 40.0% | |
| TTATTAATCCCGGACATGCA+AGG | - | chr5.2:32413892-32413911 | None:intergenic | 40.0% | |
| TTCCAGAGTTGCCATTGAAA+AGG | + | chr5.2:32409955-32409974 | MS.gene55313:CDS | 40.0% | |
| TTTACAGGCACAAAAGGAAG+AGG | + | chr5.2:32414034-32414053 | MS.gene55313:intron | 40.0% | |
| TTTGGCTGGAGTAGTTAATC+CGG | + | chr5.2:32412632-32412651 | MS.gene55313:CDS | 40.0% | |
| ! | AAAGGTTAAAGGGTACGCAA+AGG | + | chr5.2:32412575-32412594 | MS.gene55313:CDS | 40.0% |
| ! | AGCACTTGTGTACATTTTGC+AGG | + | chr5.2:32410780-32410799 | MS.gene55313:intron | 40.0% |
| ! | AGTATTTGGGACATTTCCCA+TGG | - | chr5.2:32411017-32411036 | None:intergenic | 40.0% |
| ! | ATCGAAAGTGTATTCGTGTC+AGG | + | chr5.2:32412290-32412309 | MS.gene55313:intron | 40.0% |
| ! | GAAGTTAGCTTCTACCACAA+TGG | + | chr5.2:32409839-32409858 | MS.gene55313:CDS | 40.0% |
| ! | GAGATTAGTGGATGATGAGA+TGG | + | chr5.2:32412551-32412570 | MS.gene55313:intron | 40.0% |
| ! | GCATTGCTAACCCTTTTCAA+TGG | - | chr5.2:32409969-32409988 | None:intergenic | 40.0% |
| ! | TCTCAGTGAATTTGTTCACC+TGG | + | chr5.2:32410013-32410032 | MS.gene55313:CDS | 40.0% |
| ! | TTGAAAAGGGTTAGCAATGC+AGG | + | chr5.2:32409969-32409988 | MS.gene55313:CDS | 40.0% |
| !! | ATGTTCATTGGTGATGCCAA+TGG | + | chr5.2:32412101-32412120 | MS.gene55313:CDS | 40.0% |
| !! | GGATTTTGACAAAGGTGGTT+CGG | + | chr5.2:32410034-32410053 | MS.gene55313:CDS | 40.0% |
| !! | GTTCACCTGGATTTTGACAA+AGG | + | chr5.2:32410026-32410045 | MS.gene55313:CDS | 40.0% |
| !! | TTTTGCAGGAGTATACCAAG+AGG | + | chr5.2:32410794-32410813 | MS.gene55313:intron | 40.0% |
| !!! | GCCTTTTCTTGAGTTGAAAC+AGG | - | chr5.2:32411535-32411554 | None:intergenic | 40.0% |
| AAGAAGCCATGGCAACTCTA+CGG | - | chr5.2:32410468-32410487 | None:intergenic | 45.0% | |
| AAGGGGTTTGCACTATTCTG+TGG | + | chr5.2:32413046-32413065 | MS.gene55313:intron | 45.0% | |
| ACTGTCCGATCTTGATCAGA+CGG | + | chr5.2:32410663-32410682 | MS.gene55313:intron | 45.0% | |
| AGAAGGCGAAATTACAGACC+AGG | - | chr5.2:32411569-32411588 | None:intergenic | 45.0% | |
| AGAGCAAGGGTCACAAAAGA+AGG | + | chr5.2:32409889-32409908 | MS.gene55313:CDS | 45.0% | |
| AGCTAAAACGGTGTATGTCG+AGG | - | chr5.2:32413509-32413528 | None:intergenic | 45.0% | |
| AGTCAAACCATGCATCCTCT+TGG | - | chr5.2:32410812-32410831 | None:intergenic | 45.0% | |
| CAAGAGGATGCATGGTTTGA+CGG | + | chr5.2:32410532-32410551 | MS.gene55313:intron | 45.0% | |
| CGATTAGACAATCCAGATCG+GGG | - | chr5.2:32410577-32410596 | None:intergenic | 45.0% | |
| CTGATCTTGATCTGACGACT+AGG | - | chr5.2:32410314-32410333 | None:intergenic | 45.0% | |
| CTTCGAGACCGTGTAAAGAA+TGG | + | chr5.2:32413555-32413574 | MS.gene55313:CDS | 45.0% | |
| GAAATTACAGACCAGGAACC+AGG | - | chr5.2:32411562-32411581 | None:intergenic | 45.0% | |
| GACTTCAGTAGTGTTCATGG+AGG | + | chr5.2:32410867-32410886 | MS.gene55313:CDS | 45.0% | |
| GAGTATACCAAGAGGATGCA+TGG | + | chr5.2:32410802-32410821 | MS.gene55313:CDS | 45.0% | |
| GATAACCCACGTTCCAACTT+TGG | - | chr5.2:32410375-32410394 | None:intergenic | 45.0% | |
| GGAAATAGCAAGAGGATGCA+TGG | + | chr5.2:32410524-32410543 | MS.gene55313:intron | 45.0% | |
| GTCTGCCCTTACAAACCAAT+TGG | + | chr5.2:32411817-32411836 | MS.gene55313:CDS | 45.0% | |
| TCACCAATGAACATGCTAGC+AGG | - | chr5.2:32412095-32412114 | None:intergenic | 45.0% | |
| TCTACCACAATGGGAAGTTG+TGG | + | chr5.2:32409849-32409868 | MS.gene55313:CDS | 45.0% | |
| TGAAACCTCTGATCTCCTAC+AGG | - | chr5.2:32410063-32410082 | None:intergenic | 45.0% | |
| TGAACCACAACTTCCCATTG+TGG | - | chr5.2:32409856-32409875 | None:intergenic | 45.0% | |
| TGAATTTGATCTGATGCGCC+AGG | + | chr5.2:32410395-32410414 | MS.gene55313:intron | 45.0% | |
| TGACAACACTAGGGTTCTGT+TGG | + | chr5.2:32412999-32413018 | MS.gene55313:intron | 45.0% | |
| TGTTTGTGCCAGTGCTTCAT+AGG | + | chr5.2:32412385-32412404 | MS.gene55313:intron | 45.0% | |
| TTCTGTTGTCTGGCACATGT+CGG | + | chr5.2:32411680-32411699 | MS.gene55313:intron | 45.0% | |
| TTCTTTATCGTCCGAGAGCA+GGG | + | chr5.2:32411500-32411519 | MS.gene55313:CDS | 45.0% | |
| TTTCTTTATCGTCCGAGAGC+AGG | + | chr5.2:32411499-32411518 | MS.gene55313:CDS | 45.0% | |
| TTTGGATGTTCACCGACACT+TGG | - | chr5.2:32411901-32411920 | None:intergenic | 45.0% | |
| ! | ACCCTTTTCAATGGCAACTC+TGG | - | chr5.2:32409960-32409979 | None:intergenic | 45.0% |
| ! | CATAAATCTGGAAAGCGCAG+AGG | + | chr5.2:32409915-32409934 | MS.gene55313:CDS | 45.0% |
| ! | GATTGTTTTCCTTTCGCCAG+CGG | + | chr5.2:32410986-32411005 | MS.gene55313:intron | 45.0% |
| ! | GCACCGACAATTCACATAGA+AGG | + | chr5.2:32411654-32411673 | MS.gene55313:intron | 45.0% |
| ! | TCCGCAGCGAAACATTTTTC+AGG | + | chr5.2:32411599-32411618 | MS.gene55313:CDS | 45.0% |
| !! | ACTCAAGAAAAGGCATTCCC+TGG | + | chr5.2:32411541-32411560 | MS.gene55313:CDS | 45.0% |
| !! | ATTGGTGATGCCAATGGAGA+AGG | + | chr5.2:32412107-32412126 | MS.gene55313:CDS | 45.0% |
| !! | CACCTGGATTTTGACAAAGG+TGG | + | chr5.2:32410029-32410048 | MS.gene55313:CDS | 45.0% |
| !! | TGAAGCACTGGCACAAACAT+TGG | - | chr5.2:32412384-32412403 | None:intergenic | 45.0% |
| !!! | ATTTTAAGAAAAAATTATAT+TGG | + | chr5.2:32412521-32412540 | MS.gene55313:intron | 5.0% |
| AAGCAGCACAACACTTGCTC+AGG | - | chr5.2:32414065-32414084 | None:intergenic | 50.0% | |
| AAGGCTCAAGCCTTCTCCAT+TGG | - | chr5.2:32412120-32412139 | None:intergenic | 50.0% | |
| GCACCCTGAATCTACATAGC+AGG | - | chr5.2:32411065-32411084 | None:intergenic | 50.0% | |
| GGAACTTGAATCCCTGCTCT+CGG | - | chr5.2:32411514-32411533 | None:intergenic | 50.0% | |
| GGTTTGTAAGGGCAGACATC+TGG | - | chr5.2:32411814-32411833 | None:intergenic | 50.0% | |
| TGACCCTTGCTCTTCCCATT+TGG | - | chr5.2:32409882-32409901 | None:intergenic | 50.0% | |
| ! | GGAGATCTCTCCGTGTTTTC+AGG | + | chr5.2:32412175-32412194 | MS.gene55313:CDS | 50.0% |
| ! | TTTGGTGCAGTCACATGACC+TGG | - | chr5.2:32410416-32410435 | None:intergenic | 50.0% |
| !! | AAAAGGCATTCCCTGGTTCC+TGG | + | chr5.2:32411548-32411567 | MS.gene55313:CDS | 50.0% |
| AAGCCATGGCAACTCTACGG+CGG | - | chr5.2:32410465-32410484 | None:intergenic | 55.0% | |
| AATCCGCCGTAGAGTTGCCA+TGG | + | chr5.2:32410459-32410478 | MS.gene55313:intron | 55.0% | |
| AGCAATGCAGGAAACCGCGT+GGG | + | chr5.2:32409981-32410000 | MS.gene55313:CDS | 55.0% | |
| CTGCGGAGCTTGAACACAGA+AGG | - | chr5.2:32411586-32411605 | None:intergenic | 55.0% | |
| GTGTTGAGGACGCGAAAGCA+CGG | - | chr5.2:32412715-32412734 | None:intergenic | 55.0% | |
| TAGCAATGCAGGAAACCGCG+TGG | + | chr5.2:32409980-32409999 | MS.gene55313:CDS | 55.0% | |
| ! | TAAGGGCAGACATCTGGAGC+AGG | - | chr5.2:32411808-32411827 | None:intergenic | 55.0% |
| ! | TGTTGAGGACGCGAAAGCAC+GGG | - | chr5.2:32412714-32412733 | None:intergenic | 55.0% |
| ATTTCCCATGGCGTTGCCGC+TGG | - | chr5.2:32411005-32411024 | None:intergenic | 60.0% | |
| CAATCACGCAGTCCCCGATC+TGG | + | chr5.2:32410562-32410581 | MS.gene55313:intron | 60.0% | |
| GGCTGCCTGTAGGAGATCAG+AGG | + | chr5.2:32410055-32410074 | MS.gene55313:CDS | 60.0% | |
| ! | AAGGTGGTTCGGCTGCCTGT+AGG | + | chr5.2:32410045-32410064 | MS.gene55313:CDS | 60.0% |
| ! | TGGCAACTCTGGAAGCGCAG+AGG | - | chr5.2:32409949-32409968 | None:intergenic | 60.0% |
| ATGGCGTTGCCGCTGGCGAA+AGG | - | chr5.2:32410998-32411017 | None:intergenic | 65.0% | |
| TTCGCCAGCGGCAACGCCAT+GGG | + | chr5.2:32410998-32411017 | MS.gene55313:CDS | 65.0% | |
| TTTCGCCAGCGGCAACGCCA+TGG | + | chr5.2:32410997-32411016 | MS.gene55313:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 32409819 | 32414154 | 32409819 | ID=MS.gene55313 |
| chr5.2 | mRNA | 32409819 | 32414154 | 32409819 | ID=MS.gene55313.t1;Parent=MS.gene55313 |
| chr5.2 | exon | 32409819 | 32410137 | 32409819 | ID=MS.gene55313.t1.exon1;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32409819 | 32410137 | 32409819 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| chr5.2 | exon | 32410802 | 32410888 | 32410802 | ID=MS.gene55313.t1.exon2;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32410802 | 32410888 | 32410802 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| chr5.2 | exon | 32410987 | 32411226 | 32410987 | ID=MS.gene55313.t1.exon3;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32410987 | 32411226 | 32410987 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| chr5.2 | exon | 32411485 | 32411620 | 32411485 | ID=MS.gene55313.t1.exon4;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32411485 | 32411620 | 32411485 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| chr5.2 | exon | 32411789 | 32411951 | 32411789 | ID=MS.gene55313.t1.exon5;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32411789 | 32411951 | 32411789 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| chr5.2 | exon | 32412080 | 32412208 | 32412080 | ID=MS.gene55313.t1.exon6;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32412080 | 32412208 | 32412080 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| chr5.2 | exon | 32412552 | 32412746 | 32412552 | ID=MS.gene55313.t1.exon7;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32412552 | 32412746 | 32412552 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| chr5.2 | exon | 32413483 | 32413605 | 32413483 | ID=MS.gene55313.t1.exon8;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32413483 | 32413605 | 32413483 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| chr5.2 | exon | 32414041 | 32414154 | 32414041 | ID=MS.gene55313.t1.exon9;Parent=MS.gene55313.t1 |
| chr5.2 | CDS | 32414041 | 32414154 | 32414041 | ID=cds.MS.gene55313.t1;Parent=MS.gene55313.t1 |
| Gene Sequence |
| Protein sequence |
