AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55502


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55502.t1 MTR_6g023665 94.444 306 17 0 1 306 8 313 0.0 593
MS.gene55502.t1 MTR_6g023665 96.154 52 2 0 305 356 421 472 2.21e-23 101
MS.gene55502.t1 MTR_6g488280 89.869 306 31 0 1 306 1 306 0.0 565
MS.gene55502.t1 MTR_6g488280 90.385 52 5 0 305 356 414 465 8.71e-22 96.3
MS.gene55502.t1 MTR_0428s0010 89.869 306 31 0 1 306 1 306 0.0 565
MS.gene55502.t1 MTR_0428s0010 90.385 52 5 0 305 356 414 465 8.71e-22 96.3
MS.gene55502.t1 MTR_8g006730 68.000 325 100 3 1 322 1 324 7.08e-156 446
MS.gene55502.t1 MTR_8g006730 80.000 50 10 0 305 354 416 465 2.25e-16 80.5
MS.gene55502.t1 MTR_8g006710 66.769 325 103 3 1 322 1 323 1.69e-154 442
MS.gene55502.t1 MTR_8g006710 71.154 52 15 0 305 356 415 466 1.47e-14 75.1
MS.gene55502.t1 MTR_8g465670 55.375 307 132 3 2 306 3 306 4.25e-119 353
MS.gene55502.t1 MTR_8g006220 55.519 308 132 3 1 306 1 305 1.61e-118 352
MS.gene55502.t1 MTR_0184s0040 45.079 315 165 6 1 310 16 327 1.23e-83 262
MS.gene55502.t1 MTR_0078s0190 45.079 315 165 6 1 310 16 327 1.23e-83 262
MS.gene55502.t1 MTR_0078s0010 43.175 315 171 6 1 310 1 312 3.34e-79 250
MS.gene55502.t1 MTR_0078s0200 42.492 313 169 6 1 306 1 309 2.36e-78 243
MS.gene55502.t1 MTR_8g009073 43.312 314 171 6 1 310 1 311 1.02e-77 246
MS.gene55502.t1 MTR_0078s0060 43.949 314 169 6 1 310 1 311 1.04e-77 246
MS.gene55502.t1 MTR_0184s0030 42.492 313 169 6 1 306 1 309 1.30e-76 243
MS.gene55502.t1 MTR_7g047030 42.444 311 171 6 1 306 1 308 1.82e-76 243
MS.gene55502.t1 MTR_7g047270 42.444 311 171 6 1 306 1 308 1.82e-76 243
MS.gene55502.t1 MTR_8g009067 44.268 314 168 5 1 310 1 311 1.87e-76 243
MS.gene55502.t1 MTR_7g046490 43.149 343 187 5 1 342 1 336 4.31e-76 242
MS.gene55502.t1 MTR_8g009050 43.506 308 167 6 1 304 1 305 1.34e-75 241
MS.gene55502.t1 MTR_8g009055 43.506 308 167 5 1 304 1 305 1.92e-75 240
MS.gene55502.t1 MTR_8g008990 43.182 308 168 5 1 304 1 305 6.23e-75 239
MS.gene55502.t1 MTR_8g009063 43.791 306 165 5 1 302 8 310 2.72e-74 238
MS.gene55502.t1 MTR_1g019510 40.625 320 185 4 1 318 1 317 4.77e-74 237
MS.gene55502.t1 MTR_8g008970 43.949 314 169 5 1 310 1 311 4.27e-73 242
MS.gene55502.t1 MTR_8g008970 39.053 169 92 6 127 289 466 629 1.53e-19 90.5
MS.gene55502.t1 MTR_7g117170 43.042 309 168 6 7 310 16 321 7.76e-71 229
MS.gene55502.t1 MTR_8g027885 41.528 301 169 7 7 306 19 313 2.70e-70 227
MS.gene55502.t1 MTR_8g077590 41.447 304 167 6 7 304 10 308 1.16e-68 223
MS.gene55502.t1 MTR_8g027870 39.867 301 174 7 7 306 19 313 2.90e-66 217
MS.gene55502.t1 MTR_8g006270 40.694 317 174 8 1 311 1 309 3.53e-66 216
MS.gene55502.t1 MTR_6g005600 38.065 310 185 5 1 306 1 307 1.28e-62 207
MS.gene55502.t1 MTR_8g006260 40.123 324 172 11 1 310 1 316 1.76e-62 207
MS.gene55502.t1 MTR_8g012635 38.393 336 190 8 1 325 1 330 9.53e-59 197
MS.gene55502.t1 MTR_8g012745 40.064 312 175 6 1 304 1 308 4.54e-58 195
MS.gene55502.t1 MTR_8g012650 38.298 329 188 7 1 318 1 325 3.38e-56 190
MS.gene55502.t1 MTR_3g009510 30.838 334 215 7 3 323 2 332 6.00e-51 177
MS.gene55502.t1 MTR_8g006230 44.554 202 106 5 108 306 51 249 3.23e-49 167
MS.gene55502.t1 MTR_8g009067 46.154 195 98 5 120 310 2 193 1.67e-46 162
MS.gene55502.t1 MTR_8g012630 34.202 307 144 4 1 304 1 252 1.79e-44 158
MS.gene55502.t1 MTR_8g074550 33.750 320 194 8 3 311 5 317 1.20e-43 158
MS.gene55502.t1 MTR_5g019580 32.063 315 188 10 9 306 10 315 1.20e-42 155
MS.gene55502.t1 MTR_6g033625 32.298 322 185 8 4 303 2 312 9.60e-42 152
MS.gene55502.t1 MTR_8g009073 44.324 185 96 6 130 310 1 182 5.72e-41 147
MS.gene55502.t1 MTR_5g090630 33.013 312 186 11 3 304 2 300 1.70e-39 145
MS.gene55502.t1 MTR_5g090670 31.153 321 191 11 3 304 2 311 4.41e-39 145
MS.gene55502.t1 MTR_6g033615 30.868 311 190 6 4 303 2 298 7.46e-39 144
MS.gene55502.t1 MTR_5g070040 30.723 332 208 11 1 317 6 330 1.22e-38 143
MS.gene55502.t1 MTR_5g090700 30.503 318 197 10 3 304 2 311 2.05e-38 143
MS.gene55502.t1 MTR_6g033660 29.618 314 197 8 7 303 5 311 2.74e-38 142
MS.gene55502.t1 MTR_6g033725 30.556 324 191 9 4 306 2 312 4.20e-38 142
MS.gene55502.t1 MTR_5g070090 31.677 322 197 12 1 307 6 319 3.46e-37 139
MS.gene55502.t1 MTR_6g005660 34.000 250 158 5 1 246 1 247 4.47e-36 132
MS.gene55502.t1 MTR_5g090660 30.696 316 195 11 3 304 2 307 1.61e-35 136
MS.gene55502.t1 MTR_6g033675 29.102 323 206 9 4 309 2 318 2.76e-35 134
MS.gene55502.t1 MTR_5g090600 30.671 313 197 9 3 304 2 305 7.66e-35 133
MS.gene55502.t1 MTR_5g098930 30.769 312 195 11 3 304 2 302 1.25e-34 132
MS.gene55502.t1 MTR_5g090620 30.915 317 197 9 3 305 2 310 3.15e-34 131
MS.gene55502.t1 MTR_2g040530 29.193 322 208 8 4 313 3 316 7.01e-33 127
MS.gene55502.t1 MTR_2g046750 28.981 314 196 8 7 304 6 308 7.31e-33 127
MS.gene55502.t1 MTR_5g090580 30.094 319 195 10 3 304 2 309 1.83e-32 127
MS.gene55502.t1 MTR_5g019580 29.936 314 168 10 9 306 62 339 5.59e-32 125
MS.gene55502.t1 MTR_2g046820 29.338 317 206 7 7 313 6 314 4.59e-31 122
MS.gene55502.t1 MTR_5g090610 28.846 312 194 9 3 304 2 295 5.44e-31 122
MS.gene55502.t1 MTR_4g082810 29.874 318 187 10 7 302 8 311 6.64e-26 107
MS.gene55502.t1 MTR_8g012730 37.640 178 89 4 144 318 4 162 8.08e-26 105
MS.gene55502.t1 MTR_6g078320 28.080 349 216 11 7 329 12 351 9.50e-25 105
MS.gene55502.t1 MTR_5g090650 26.752 314 179 12 3 304 2 276 3.65e-24 101
MS.gene55502.t1 MTR_3g009500 29.020 255 164 6 4 244 3 254 4.63e-24 100
MS.gene55502.t1 MTR_5g464760 28.198 344 187 15 2 302 8 334 7.76e-24 102
MS.gene55502.t1 MTR_3g009520 27.907 258 169 6 1 244 1 255 1.52e-23 98.6
MS.gene55502.t1 MTR_5g464810 28.402 338 182 17 7 302 13 332 1.42e-21 95.9
MS.gene55502.t1 MTR_5g064240 28.402 338 182 17 7 302 13 332 1.42e-21 95.9
MS.gene55502.t1 MTR_3g069690 28.221 326 182 12 2 302 3 301 1.58e-20 92.8
MS.gene55502.t1 MTR_0036s0220 26.549 339 187 15 7 302 13 332 2.24e-20 92.4
MS.gene55502.t1 MTR_4g082820 28.125 320 187 10 7 302 8 308 8.15e-20 90.9
MS.gene55502.t1 MTR_7g013180 25.938 320 192 9 10 305 9 307 8.59e-20 90.5
MS.gene55502.t1 MTR_2g098430 24.702 336 200 13 1 304 1 315 8.86e-20 90.9
MS.gene55502.t1 MTR_6g038300 26.923 338 193 14 7 316 12 323 2.68e-19 89.0
MS.gene55502.t1 MTR_8g068330 25.199 377 232 11 2 353 4 355 4.99e-19 88.2
MS.gene55502.t1 MTR_2g008210 27.353 340 188 16 3 302 8 328 1.55e-18 87.0
MS.gene55502.t1 MTR_6g014290 26.113 337 201 12 3 302 7 332 1.57e-18 87.0
MS.gene55502.t1 MTR_1g019520 70.370 54 16 0 255 308 3 56 1.94e-18 83.2
MS.gene55502.t1 MTR_3g008010 25.978 358 209 14 9 326 13 354 2.16e-18 86.7
MS.gene55502.t1 MTR_8g068340 25.067 375 235 14 2 353 8 359 3.59e-18 85.9
MS.gene55502.t1 MTR_3g069710 26.688 311 194 10 7 302 13 304 6.09e-18 85.1
MS.gene55502.t1 MTR_5g090690 27.731 238 129 8 78 304 34 239 6.99e-18 84.3
MS.gene55502.t1 MTR_6g038240 25.312 320 190 11 9 302 14 310 7.44e-18 84.7
MS.gene55502.t1 MTR_6g038230 27.596 337 188 15 2 307 4 315 4.19e-17 82.4
MS.gene55502.t1 MTR_7g080935 26.979 341 185 17 1 306 1 312 5.08e-17 82.4
MS.gene55502.t1 MTR_6g038200 26.686 341 186 16 2 307 4 315 5.09e-17 82.4
MS.gene55502.t1 MTR_6g014220 26.765 340 195 16 3 302 7 332 5.67e-17 82.4
MS.gene55502.t1 MTR_8g059425 28.696 345 184 17 2 302 6 332 7.15e-17 82.0
MS.gene55502.t1 MTR_8g068360 25.714 385 219 15 2 353 8 358 7.59e-17 82.0
MS.gene55502.t1 MTR_7g055710 25.316 316 210 8 7 302 12 321 1.06e-16 81.6
MS.gene55502.t1 MTR_4g064987 26.299 308 202 11 7 302 9 303 1.15e-16 81.3
MS.gene55502.t1 MTR_5g035580 26.126 333 199 12 7 313 14 325 1.42e-16 80.9
MS.gene55502.t1 MTR_4g095008 26.199 271 177 9 80 338 82 341 1.52e-16 81.3
MS.gene55502.t1 MTR_5g058320 26.498 317 202 11 8 302 12 319 1.89e-16 80.5
MS.gene55502.t1 MTR_4g094220 24.927 341 195 13 7 302 8 332 2.05e-16 80.5
MS.gene55502.t1 MTR_4g485640 25.083 303 195 10 14 301 217 502 2.13e-16 80.9
MS.gene55502.t1 MTR_5g040030 26.404 356 222 13 3 333 11 351 2.51e-16 80.5
MS.gene55502.t1 MTR_3g479470 25.223 337 203 12 3 302 10 334 3.15e-16 80.1
MS.gene55502.t1 MTR_5g075440 25.079 315 213 9 10 311 14 318 3.24e-16 80.1
MS.gene55502.t1 MTR_7g013240 24.919 309 194 9 10 302 10 296 3.55e-16 79.7
MS.gene55502.t1 MTR_3g479490 25.581 344 197 14 1 302 1 327 4.24e-16 79.7
MS.gene55502.t1 MTR_7g070940 38.849 139 75 4 173 302 173 310 5.10e-16 79.3
MS.gene55502.t1 MTR_4g064987 26.045 311 193 12 7 302 9 297 5.21e-16 79.3
MS.gene55502.t1 MTR_7g013260 29.032 217 138 6 93 302 90 297 5.65e-16 79.0
MS.gene55502.t1 MTR_5g087620 25.740 338 206 13 2 304 6 333 5.92e-16 79.3
MS.gene55502.t1 MTR_5g035560 24.620 329 181 12 7 302 12 306 7.05e-16 79.0
MS.gene55502.t1 MTR_7g013200 27.064 218 140 6 93 302 90 296 7.67e-16 78.6
MS.gene55502.t1 MTR_6g014040 28.116 345 187 16 3 302 7 335 8.18e-16 79.0
MS.gene55502.t1 MTR_5g072860 26.364 330 200 11 7 311 19 330 1.23e-15 78.2
MS.gene55502.t1 MTR_6g052375 34.058 138 79 5 169 296 27 162 2.49e-15 76.3
MS.gene55502.t1 MTR_6g013960 26.608 342 199 15 2 303 6 335 3.59e-15 77.0
MS.gene55502.t1 MTR_7g080940 25.294 340 192 15 1 306 1 312 4.35e-15 76.6
MS.gene55502.t1 MTR_8g083280 24.176 364 251 8 7 351 8 365 4.81e-15 76.3
MS.gene55502.t1 MTR_4g485630 24.918 305 201 8 16 302 19 313 5.70e-15 76.3
MS.gene55502.t1 MTR_7g070870 31.694 183 103 7 161 333 173 343 6.36e-15 75.9
MS.gene55502.t1 MTR_2g008220 25.225 333 224 8 7 326 15 335 9.91e-15 75.5
MS.gene55502.t1 MTR_6g014050 33.918 171 89 10 149 302 172 335 1.03e-14 75.5
MS.gene55502.t1 MTR_6g014250 24.561 342 200 13 3 302 7 332 1.06e-14 75.5
MS.gene55502.t1 MTR_4g008630 23.596 356 228 10 2 340 10 338 1.23e-14 75.1
MS.gene55502.t1 MTR_5g031860 25.231 325 203 13 7 302 13 326 1.40e-14 75.1
MS.gene55502.t1 MTR_6g014200 36.842 152 69 9 170 302 188 331 2.07e-14 74.7
MS.gene55502.t1 MTR_7g011470 33.562 146 82 6 170 302 177 320 2.12e-14 74.3
MS.gene55502.t1 MTR_6g013440 27.299 348 185 17 3 302 8 335 2.17e-14 74.3
MS.gene55502.t1 MTR_8g071070 28.743 334 185 17 4 304 5 318 2.38e-14 74.3
MS.gene55502.t1 MTR_3g031450 23.567 314 197 10 7 302 19 307 2.70e-14 74.3
MS.gene55502.t1 MTR_7g011470 33.813 139 78 5 177 302 179 316 3.06e-14 73.9
MS.gene55502.t1 MTR_2g008226 26.562 320 203 11 7 302 11 322 3.68e-14 73.6
MS.gene55502.t1 MTR_7g102560 27.753 227 126 9 124 328 133 343 3.92e-14 73.6
MS.gene55502.t1 MTR_4g031800 35.849 106 56 1 210 303 206 311 4.79e-14 73.6
MS.gene55502.t1 MTR_7g013220 24.062 320 197 12 9 302 8 307 4.86e-14 73.2
MS.gene55502.t1 MTR_8g083290 24.471 331 193 12 7 302 5 313 5.77e-14 73.2
MS.gene55502.t1 MTR_5g031840 28.182 220 136 9 117 317 118 334 6.00e-14 73.2
MS.gene55502.t1 MTR_3g479520 24.340 341 205 12 1 302 10 336 6.57e-14 73.2
MS.gene55502.t1 MTR_6g011340 25.725 276 165 9 61 302 65 334 7.54e-14 72.8
MS.gene55502.t1 MTR_6g014020 27.246 345 191 18 2 302 6 334 7.54e-14 72.8
MS.gene55502.t1 MTR_6g014187 25.513 341 202 17 2 302 6 334 9.33e-14 72.4
MS.gene55502.t1 MTR_0288s0020 26.205 332 190 15 3 302 7 315 1.01e-13 72.4
MS.gene55502.t1 MTR_7g070800 24.079 353 233 11 1 333 1 338 1.09e-13 72.4
MS.gene55502.t1 MTR_5g016480 29.032 155 94 5 161 302 168 319 1.62e-13 71.6
MS.gene55502.t1 MTR_4g485620 26.000 250 164 7 96 332 84 325 1.68e-13 71.6
MS.gene55502.t1 MTR_1g040310 24.658 365 218 12 1 333 8 347 1.71e-13 71.6
MS.gene55502.t1 MTR_7g070660 23.962 313 213 8 7 302 12 316 2.69e-13 71.2
MS.gene55502.t1 MTR_6g038220 25.532 329 177 16 9 302 14 309 2.99e-13 70.9
MS.gene55502.t1 MTR_5g072810 24.299 321 194 12 7 303 13 308 3.61e-13 70.9
MS.gene55502.t1 MTR_5g031830 25.778 225 142 8 100 302 106 327 4.20e-13 70.5
MS.gene55502.t1 MTR_7g067120 24.138 319 186 11 3 302 6 287 4.41e-13 70.5
MS.gene55502.t1 MTR_6g013435 26.904 197 126 6 131 312 22 215 4.84e-13 69.3
MS.gene55502.t1 MTR_6g013450 33.094 139 79 5 177 302 198 335 4.95e-13 70.5
MS.gene55502.t1 MTR_3g079480 23.669 338 207 13 3 302 18 342 5.21e-13 70.5
MS.gene55502.t1 MTR_4g485590 31.548 168 91 8 169 317 151 313 5.63e-13 70.1
MS.gene55502.t1 MTR_7g102460 25.073 343 218 12 9 324 12 342 6.17e-13 70.1
MS.gene55502.t1 MTR_2g008225 24.189 339 220 9 7 326 16 336 6.58e-13 70.1
MS.gene55502.t1 MTR_0536s0020 24.107 336 180 13 2 301 14 310 6.84e-13 70.1
MS.gene55502.t1 MTR_5g039900 22.350 349 227 10 7 323 14 350 9.45e-13 69.3
MS.gene55502.t1 MTR_7g070610 24.928 349 208 15 11 326 20 347 1.02e-12 69.3
MS.gene55502.t1 MTR_8g066610 26.054 261 157 8 92 330 100 346 1.37e-12 68.9
MS.gene55502.t1 MTR_8g090095 24.436 266 139 6 96 332 119 351 1.39e-12 68.9
MS.gene55502.t1 MTR_6g014150 32.164 171 92 9 149 302 168 331 1.40e-12 68.9
MS.gene55502.t1 MTR_8g064870 30.986 142 84 5 174 303 178 317 1.40e-12 68.9
MS.gene55502.t1 MTR_4g094920 29.932 147 85 5 203 338 217 356 1.58e-12 68.9
MS.gene55502.t1 MTR_1g032490 24.159 327 210 13 7 308 11 324 2.17e-12 68.2
MS.gene55502.t1 MTR_7g102490 23.876 356 218 17 4 324 7 344 2.34e-12 68.2
MS.gene55502.t1 MTR_4g123553 25.740 338 211 12 7 326 16 331 2.37e-12 68.2
MS.gene55502.t1 MTR_2g034990 25.697 323 203 12 1 301 6 313 2.64e-12 68.2
MS.gene55502.t1 MTR_6g014186 24.854 342 203 16 2 302 3 331 2.66e-12 68.2
MS.gene55502.t1 MTR_5g067170 25.625 320 205 11 1 301 6 311 2.83e-12 68.2
MS.gene55502.t1 MTR_6g035265 24.926 337 196 17 12 326 19 320 3.01e-12 67.8
MS.gene55502.t1 MTR_7g102550 24.581 358 216 14 9 332 12 349 3.43e-12 67.8
MS.gene55502.t1 MTR_7g070810 30.460 174 99 7 170 333 175 336 3.83e-12 67.8
MS.gene55502.t1 MTR_3g084520 26.818 220 132 8 109 305 106 319 3.94e-12 67.4
MS.gene55502.t1 MTR_6g014170 26.667 345 173 15 3 302 7 316 4.06e-12 67.4
MS.gene55502.t1 MTR_3g031400 23.226 310 201 10 7 302 19 305 4.09e-12 67.4
MS.gene55502.t1 MTR_6g013920 30.872 149 82 7 170 302 190 333 6.27e-12 67.0
MS.gene55502.t1 MTR_4g117950 25.155 322 195 11 1 301 1 297 7.37e-12 66.6
MS.gene55502.t1 MTR_8g044140 26.718 262 162 9 89 333 64 312 9.48e-12 66.2
MS.gene55502.t1 MTR_3g479610 29.932 147 75 6 177 302 27 166 9.86e-12 65.5
MS.gene55502.t1 MTR_1g029540 23.301 309 193 13 11 302 19 300 1.07e-11 66.2
MS.gene55502.t1 MTR_7g070860 24.194 310 208 10 11 302 14 314 1.07e-11 66.2
MS.gene55502.t1 MTR_7g067330 24.921 317 186 11 3 302 6 287 1.12e-11 65.9
MS.gene55502.t1 MTR_6g013900 32.192 146 84 5 170 302 190 333 1.16e-11 66.2
MS.gene55502.t1 MTR_7g102450 28.962 183 116 5 161 332 156 335 1.39e-11 65.9
MS.gene55502.t1 MTR_6g013680 28.235 170 100 7 149 302 118 281 1.41e-11 65.5
MS.gene55502.t1 MTR_4g117960 25.000 336 210 14 10 326 15 327 1.56e-11 65.9
MS.gene55502.t1 MTR_8g064880 26.540 211 135 6 105 302 115 318 1.56e-11 65.9
MS.gene55502.t1 MTR_6g013990 26.901 342 194 15 2 302 6 332 1.62e-11 65.9
MS.gene55502.t1 MTR_1g062380 23.362 351 221 14 7 326 17 350 2.25e-11 65.5
MS.gene55502.t1 MTR_6g014190 31.655 139 81 5 177 302 4 141 2.52e-11 64.3
MS.gene55502.t1 MTR_6g042310 25.373 335 216 13 7 326 19 334 2.75e-11 65.1
MS.gene55502.t1 MTR_7g012120 37.143 105 52 4 209 301 213 315 2.94e-11 65.1
MS.gene55502.t1 MTR_5g016660 28.440 218 121 8 112 306 121 326 3.29e-11 64.7
MS.gene55502.t1 MTR_2g035040 29.224 219 122 7 122 326 35 234 3.83e-11 64.3
MS.gene55502.t1 MTR_0891s0010 29.787 141 83 4 177 302 4 143 4.07e-11 63.5
MS.gene55502.t1 MTR_1g107380 25.481 208 138 6 108 303 122 324 4.36e-11 64.3
MS.gene55502.t1 MTR_1g107315 24.012 329 213 11 2 306 4 319 4.55e-11 64.3
MS.gene55502.t1 MTR_7g117405 22.082 317 221 9 16 313 22 331 4.96e-11 64.3
MS.gene55502.t1 MTR_7g080950 23.494 332 203 13 1 306 1 307 5.20e-11 63.9
MS.gene55502.t1 MTR_1g107350 28.270 237 144 10 83 304 92 317 6.11e-11 63.9
MS.gene55502.t1 MTR_5g045960 28.796 191 116 7 125 301 135 319 6.38e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55502.t1 AT4G01070 41.214 313 175 7 3 310 5 313 1.26e-71 227
MS.gene55502.t1 AT4G01070 41.424 309 172 7 7 310 9 313 1.77e-70 228
MS.gene55502.t1 AT1G01420 40.836 311 171 9 7 310 9 313 2.75e-70 227
MS.gene55502.t1 AT1G01420 40.836 311 171 9 7 310 12 316 3.16e-70 227
MS.gene55502.t1 AT1G01390 39.355 310 177 8 7 310 9 313 1.01e-64 213
MS.gene55502.t1 AT1G01390 39.355 310 177 8 7 310 26 330 1.21e-64 213
MS.gene55502.t1 AT5G26310 32.131 305 188 10 8 304 9 302 7.75e-44 157
MS.gene55502.t1 AT5G66690 32.468 308 183 12 8 304 9 302 9.77e-41 149
MS.gene55502.t1 AT3G50740 32.166 314 189 11 4 304 5 307 3.22e-40 148
MS.gene55502.t1 AT3G16520 32.051 312 200 8 7 309 6 314 4.16e-39 144
MS.gene55502.t1 AT3G16520 32.051 312 200 8 7 309 6 314 4.37e-39 144
MS.gene55502.t1 AT3G16520 32.051 312 200 8 7 309 6 314 4.59e-39 144
MS.gene55502.t1 AT3G21790 29.874 318 191 8 7 302 5 312 1.54e-38 144
MS.gene55502.t1 AT3G21780 31.111 315 188 8 4 302 2 303 3.35e-38 142
MS.gene55502.t1 AT3G21800 29.938 324 204 8 4 311 3 319 2.58e-36 137
MS.gene55502.t1 AT2G18570 30.380 316 197 12 9 311 8 313 9.19e-36 135
MS.gene55502.t1 AT1G07250 27.829 327 213 9 1 307 1 324 1.07e-33 130
MS.gene55502.t1 AT1G07260 29.290 338 210 12 2 317 4 334 3.16e-33 129
MS.gene55502.t1 AT3G21750 27.832 309 204 8 4 302 2 301 8.01e-32 125
MS.gene55502.t1 AT4G36770 30.744 309 194 9 8 306 6 304 8.37e-32 124
MS.gene55502.t1 AT2G29750 29.080 337 205 13 7 317 9 337 3.05e-31 123
MS.gene55502.t1 AT1G07240 28.571 322 203 9 3 302 2 318 6.88e-31 122
MS.gene55502.t1 AT2G29730 26.984 315 210 9 10 309 9 318 1.38e-30 121
MS.gene55502.t1 AT2G29710 26.384 307 208 7 10 302 9 311 4.32e-29 117
MS.gene55502.t1 AT4G15280 27.848 316 202 8 4 302 2 308 4.44e-29 117
MS.gene55502.t1 AT4G15280 27.848 316 202 8 4 302 34 340 6.79e-29 117
MS.gene55502.t1 AT3G21760 28.000 325 197 9 4 302 2 315 2.06e-28 115
MS.gene55502.t1 AT2G29740 27.273 330 212 10 2 308 4 328 1.48e-27 113
MS.gene55502.t1 AT4G15260 30.890 191 125 3 116 302 1 188 1.15e-26 108
MS.gene55502.t1 AT2G18560 31.628 215 135 6 96 304 8 216 1.76e-25 106
MS.gene55502.t1 AT1G05675 28.571 322 195 12 1 302 1 307 8.20e-23 99.4
MS.gene55502.t1 AT1G05680 26.708 322 201 11 1 302 1 307 2.66e-20 92.0
MS.gene55502.t1 AT4G34135 25.429 350 190 9 3 307 8 331 3.23e-20 90.5
MS.gene55502.t1 AT2G36770 26.627 338 215 13 16 330 24 351 4.15e-20 91.7
MS.gene55502.t1 AT4G34135 25.501 349 189 9 3 306 8 330 5.10e-20 91.3
MS.gene55502.t1 AT2G36800 25.076 331 218 10 16 324 22 344 2.14e-19 89.7
MS.gene55502.t1 AT2G36780 26.331 338 216 12 16 330 24 351 5.54e-19 88.6
MS.gene55502.t1 AT3G46650 24.116 311 199 9 1 303 5 286 6.31e-19 87.8
MS.gene55502.t1 AT1G22360 27.193 342 190 16 3 302 7 331 7.38e-19 87.8
MS.gene55502.t1 AT4G34131 26.220 328 205 12 3 302 7 325 7.52e-19 87.8
MS.gene55502.t1 AT1G22360 27.193 342 190 16 3 302 7 331 8.13e-19 87.8
MS.gene55502.t1 AT2G30140 26.316 304 207 8 7 303 14 307 1.45e-18 87.0
MS.gene55502.t1 AT2G30140 26.316 304 206 9 7 303 14 306 3.67e-18 85.9
MS.gene55502.t1 AT1G10400 27.198 364 216 17 3 332 4 352 8.49e-18 84.7
MS.gene55502.t1 AT2G36750 25.148 338 213 11 16 326 20 344 8.89e-18 84.7
MS.gene55502.t1 AT5G38010 26.168 321 198 10 2 302 6 307 2.42e-17 83.2
MS.gene55502.t1 AT1G22340 25.788 349 204 15 3 311 10 343 3.00e-17 83.2
MS.gene55502.t1 AT2G15480 26.070 257 167 6 92 338 109 352 4.64e-17 82.8
MS.gene55502.t1 AT2G15480 26.070 257 167 6 92 338 109 352 4.84e-17 82.4
MS.gene55502.t1 AT2G36760 25.429 350 218 13 9 330 17 351 6.66e-17 82.0
MS.gene55502.t1 AT3G55710 25.868 317 196 11 7 302 9 307 9.24e-17 81.6
MS.gene55502.t1 AT5G14860 25.484 310 205 8 16 302 18 324 1.07e-16 81.6
MS.gene55502.t1 AT3G46690 25.846 325 206 12 1 308 1 307 1.88e-16 80.5
MS.gene55502.t1 AT3G46670 27.070 314 189 12 7 302 10 301 4.14e-16 79.7
MS.gene55502.t1 AT1G22370 26.513 347 198 18 3 311 10 337 4.28e-16 79.7
MS.gene55502.t1 AT3G55700 23.988 321 193 11 7 302 9 303 6.38e-16 79.0
MS.gene55502.t1 AT5G59590 25.159 314 203 10 3 302 7 302 6.40e-16 79.0
MS.gene55502.t1 AT5G37950 30.622 209 124 7 103 302 77 273 6.61e-16 78.2
MS.gene55502.t1 AT2G36970 29.756 205 129 8 107 302 124 322 1.06e-15 78.6
MS.gene55502.t1 AT5G03490 26.235 324 187 12 7 302 20 319 1.56e-15 77.8
MS.gene55502.t1 AT3G53160 25.157 318 205 9 9 302 11 319 1.92e-15 77.8
MS.gene55502.t1 AT5G12890 26.462 325 199 13 7 304 11 322 2.49e-15 77.4
MS.gene55502.t1 AT5G37950 30.288 208 132 6 103 302 77 279 2.56e-15 76.6
MS.gene55502.t1 AT1G22380 25.926 351 196 18 2 308 9 339 5.52e-15 76.3
MS.gene55502.t1 AT2G15490 26.953 256 156 9 92 330 106 347 6.01e-15 76.3
MS.gene55502.t1 AT2G15490 27.313 227 137 8 92 301 106 321 8.96e-15 75.9
MS.gene55502.t1 AT1G22400 28.035 346 183 20 3 302 10 335 9.06e-15 75.9
MS.gene55502.t1 AT4G15550 30.500 200 124 7 109 301 123 314 9.09e-15 75.5
MS.gene55502.t1 AT2G36790 26.254 339 217 12 9 324 16 344 1.12e-14 75.5
MS.gene55502.t1 AT2G16890 25.904 332 202 15 7 311 10 324 1.35e-14 75.1
MS.gene55502.t1 AT2G16890 25.602 332 203 15 7 311 10 324 1.43e-14 74.7
MS.gene55502.t1 AT3G46700 24.713 348 215 13 1 329 1 320 1.64e-14 74.7
MS.gene55502.t1 AT2G23250 28.218 202 119 8 161 353 141 325 2.48e-14 74.3
MS.gene55502.t1 AT3G02100 24.419 344 202 13 7 314 14 335 2.96e-14 73.9
MS.gene55502.t1 AT4G15500 26.543 324 198 13 7 306 10 317 4.10e-14 73.6
MS.gene55502.t1 AT2G31750 37.037 108 52 3 209 302 202 307 6.36e-14 73.2
MS.gene55502.t1 AT2G31750 37.037 108 52 3 209 302 202 307 7.04e-14 73.2
MS.gene55502.t1 AT2G23260 24.478 335 210 12 3 316 7 319 9.85e-14 72.4
MS.gene55502.t1 AT3G21560 27.823 248 152 10 69 302 89 323 1.05e-13 72.4
MS.gene55502.t1 AT2G31790 27.273 220 116 8 111 302 106 309 1.09e-13 72.4
MS.gene55502.t1 AT5G59580 25.402 311 203 9 4 302 7 300 1.42e-13 72.0
MS.gene55502.t1 AT2G30150 25.080 311 203 11 7 303 14 308 1.43e-13 72.0
MS.gene55502.t1 AT5G49690 23.824 340 216 12 2 317 6 326 1.44e-13 72.0
MS.gene55502.t1 AT5G38040 25.839 298 196 12 16 302 20 303 1.54e-13 72.0
MS.gene55502.t1 AT3G46680 24.620 329 206 12 1 310 4 309 2.01e-13 71.6
MS.gene55502.t1 AT1G51210 26.115 314 201 10 4 302 18 315 2.53e-13 71.2
MS.gene55502.t1 AT2G30150 25.325 308 200 11 10 303 1 292 2.98e-13 70.9
MS.gene55502.t1 AT1G73880 25.378 331 220 13 4 317 12 332 3.22e-13 70.9
MS.gene55502.t1 AT1G22370 34.483 116 60 4 210 311 54 167 3.24e-13 70.1
MS.gene55502.t1 AT3G53150 30.242 248 128 12 125 344 149 379 7.83e-13 69.7
MS.gene55502.t1 AT1G78270 24.148 352 202 16 10 321 17 343 1.19e-12 69.3
MS.gene55502.t1 AT2G28080 28.877 187 122 6 124 302 142 325 2.46e-12 68.2
MS.gene55502.t1 AT4G15480 28.646 192 119 6 124 304 142 326 2.54e-12 68.2
MS.gene55502.t1 AT1G24100 25.846 325 194 11 4 302 9 312 2.91e-12 68.2
MS.gene55502.t1 AT4G15490 35.922 103 48 2 212 306 229 321 3.49e-12 67.8
MS.gene55502.t1 AT1G05560 28.505 214 106 6 109 301 107 294 3.78e-12 67.8
MS.gene55502.t1 AT1G05560 28.505 214 106 6 109 301 157 344 5.43e-12 67.4
MS.gene55502.t1 AT2G43820 24.924 329 193 14 3 306 4 303 1.04e-11 66.2
MS.gene55502.t1 AT2G16890 24.522 314 195 14 7 293 10 308 5.99e-11 63.2
MS.gene55502.t1 AT2G16890 24.522 314 195 14 7 293 10 308 5.99e-11 63.2
MS.gene55502.t1 AT1G05530 29.187 209 110 7 111 301 109 297 6.53e-11 63.9
MS.gene55502.t1 AT3G11340 28.646 192 118 6 121 302 115 297 6.79e-11 63.9
MS.gene55502.t1 AT3G46660 26.367 311 203 12 4 302 12 308 7.52e-11 63.5

Find 62 sgRNAs with CRISPR-Local

Find 106 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGTATTCATTGTGATTT+TGG 0.169199 6.2:+16995827 None:intergenic
CAAACATGTCAATGTGTTTA+AGG 0.216637 6.2:-16995165 MS.gene55502:CDS
TATGAATACTTTCACTGATT+TGG 0.217613 6.2:-16995278 MS.gene55502:CDS
ATGAGTTTCATCTGTGTTGC+AGG 0.273051 6.2:+16995673 None:intergenic
CAACTCAACGAGTTAGCTTT+TGG 0.298197 6.2:-16995070 MS.gene55502:CDS
CATGATTCTCTTTATAGCTT+TGG 0.321735 6.2:+16994664 None:intergenic
AAAAGAAAAGGTATGATAAA+AGG 0.327187 6.2:+16995527 None:intergenic
TATGAAACAGTAAATGTTCC+TGG 0.339274 6.2:-16995421 MS.gene55502:CDS
TCTATCTTGAAGAACCCTTA+TGG 0.349429 6.2:+16995246 None:intergenic
TGAAGAACCCTTATGGCTTC+CGG 0.352971 6.2:+16995253 None:intergenic
TTTACTTCTTCATGAAGAAA+TGG 0.370204 6.2:+16995634 None:intergenic
ATCCGGTTGGACCTATCATT+AGG 0.380479 6.2:-16995207 MS.gene55502:CDS
CACATCAAGAATTGATTTGT+AGG 0.382627 6.2:+16995333 None:intergenic
CTTGATCTTTCACAGATAAA+CGG 0.383472 6.2:+16995361 None:intergenic
TTTCTTCTCTAGCATTGAAA+TGG 0.396312 6.2:-16994544 MS.gene55502:CDS
TTTGACTCATTCCTAATGAT+AGG 0.405133 6.2:+16995196 None:intergenic
TACTTTCACTGATTTGGAAC+CGG 0.433060 6.2:-16995272 MS.gene55502:CDS
ATTTGGAACCGGAAGCCATA+AGG 0.434669 6.2:-16995261 MS.gene55502:CDS
GATGCAGCTTCATCAAGGTT+TGG 0.439628 6.2:+16995466 None:intergenic
TAAGTGAGCATGGTTCTTCT+AGG 0.444274 6.2:-16994574 MS.gene55502:CDS
TTGATCTTTCACAGATAAAC+GGG 0.449212 6.2:+16995362 None:intergenic
AGAGAAACCTAGTGTTTATC+CGG 0.451664 6.2:-16995224 MS.gene55502:CDS
GTCAATGTGTTTAAGGTGGT+TGG 0.454608 6.2:-16995158 MS.gene55502:CDS
TGGGAATGAGGAATGCGATA+TGG 0.458796 6.2:+16995809 None:intergenic
AGAACAGTGAAGTTCATGTT+TGG 0.465285 6.2:+16995736 None:intergenic
GATTGCATGGAAGGAGTTAG+TGG 0.480920 6.2:+16995778 None:intergenic
TTCAAGATGGATTGCATGGA+AGG 0.487127 6.2:+16995769 None:intergenic
TTCCTAATGATAGGTCCAAC+CGG 0.502798 6.2:+16995205 None:intergenic
ACAGTGAAGTTCATGTTTGG+TGG 0.503055 6.2:+16995739 None:intergenic
AAGGACTTCAATGTTGACTT+GGG 0.504288 6.2:+16995711 None:intergenic
GAAGGACTTCAATGTTGACT+TGG 0.511801 6.2:+16995710 None:intergenic
GCATTCCTCATTCCCACACT+TGG 0.513282 6.2:-16995802 MS.gene55502:CDS
GAGTGGTCACAAATTCTTGT+GGG 0.514664 6.2:-16995038 MS.gene55502:CDS
TTTGGAACCGGAAGCCATAA+GGG 0.516757 6.2:-16995260 MS.gene55502:CDS
ATTGCTATGGTTCCTTCACC+TGG 0.517578 6.2:-16995895 MS.gene55502:CDS
GGAATCAAATGGCTCAGTCC+AGG 0.518530 6.2:+16995877 None:intergenic
AAACCTAGTGTTTATCCGGT+TGG 0.530377 6.2:-16995220 MS.gene55502:CDS
GTGGACCAAGTGTGGGAATG+AGG 0.530898 6.2:+16995797 None:intergenic
CAAAGCTATAAAGAGAATCA+TGG 0.536822 6.2:-16994663 MS.gene55502:CDS
GAGTTGATGCAGCTTCATCA+AGG 0.540186 6.2:+16995461 None:intergenic
AGGAGTTAGTGGACCAAGTG+TGG 0.541159 6.2:+16995789 None:intergenic
CTTTCACAGATAAACGGGTC+GGG 0.549280 6.2:+16995367 None:intergenic
AGTGTTCAAGATGGATTGCA+TGG 0.550670 6.2:+16995765 None:intergenic
AAGCTCCTGAGGAAAAGAAA+AGG 0.555086 6.2:+16995515 None:intergenic
ACTCAACTAGTGGAATCAAA+TGG 0.555622 6.2:+16995866 None:intergenic
CAGGTTCAAGATTATGTCGA+AGG 0.567364 6.2:+16995692 None:intergenic
AAAATCAAAGAATTGAGTGT+TGG 0.569192 6.2:-16994611 MS.gene55502:CDS
GCTACTGTGCTAAGTGAGCA+TGG 0.572786 6.2:-16994584 MS.gene55502:CDS
TGGTGGAAGAGTGTTCAAGA+TGG 0.583956 6.2:+16995756 None:intergenic
AGTTTAGCAAACTCAACTAG+TGG 0.591982 6.2:+16995856 None:intergenic
TTTAGCAACATCATGTGCAT+CGG 0.592165 6.2:+16995558 None:intergenic
AAATGGCTCAGTCCAGGTGA+AGG 0.593894 6.2:+16995883 None:intergenic
GGTCGGGAAGCTCTTTGATA+CGG 0.597353 6.2:+16995383 None:intergenic
CGAGTGGTCACAAATTCTTG+TGG 0.600078 6.2:-16995039 MS.gene55502:CDS
TCTTTCACAGATAAACGGGT+CGG 0.613356 6.2:+16995366 None:intergenic
GGAGTTAGTGGACCAAGTGT+GGG 0.621400 6.2:+16995790 None:intergenic
GCTATAAAGAGAATCATGGA+AGG 0.638274 6.2:-16994659 MS.gene55502:CDS
TGCTGAAAACTAAAGCAACT+AGG 0.645210 6.2:+16995590 None:intergenic
GGTCCAACCGGATAAACACT+AGG 0.660497 6.2:+16995217 None:intergenic
AGGACTTCAATGTTGACTTG+GGG 0.661321 6.2:+16995712 None:intergenic
ACATGTCAATGTGTTTAAGG+TGG 0.665783 6.2:-16995162 MS.gene55502:CDS
GGAAGCTCTTTGATACGGAG+AGG 0.674985 6.2:+16995388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATTATCATTGTTTGA+TGG - chr6.2:16995144-16995163 MS.gene55502:CDS 20.0%
!!! AAAAGAAAAGGTATGATAAA+AGG + chr6.2:16994927-16994946 None:intergenic 20.0%
! AAAATCAAAGAATTGAGTGT+TGG - chr6.2:16995840-16995859 MS.gene55502:CDS 25.0%
! TTGGAAAGAACAATAGAAAA+TGG - chr6.2:16995522-16995541 MS.gene55502:CDS 25.0%
! TTTACTTCTTCATGAAGAAA+TGG + chr6.2:16994820-16994839 None:intergenic 25.0%
!! TATGAATACTTTCACTGATT+TGG - chr6.2:16995173-16995192 MS.gene55502:CDS 25.0%
!! TATGGTATTCATTGTGATTT+TGG + chr6.2:16994627-16994646 None:intergenic 25.0%
!!! ATTGTTTTGTCCACTAAAAT+AGG + chr6.2:16995472-16995491 None:intergenic 25.0%
!!! GTATTTACCAAATGGTTTTT+TGG - chr6.2:16995503-16995522 MS.gene55502:CDS 25.0%
AACTGGGATTATAAAACAAG+AGG - chr6.2:16995758-16995777 MS.gene55502:CDS 30.0%
CAAACATGTCAATGTGTTTA+AGG - chr6.2:16995286-16995305 MS.gene55502:CDS 30.0%
CAAAGCTATAAAGAGAATCA+TGG - chr6.2:16995788-16995807 MS.gene55502:CDS 30.0%
CATGATTCTCTTTATAGCTT+TGG + chr6.2:16995790-16995809 None:intergenic 30.0%
CCATTTGGTAAATACTCTAA+TGG + chr6.2:16995498-16995517 None:intergenic 30.0%
CTTGATCTTTCACAGATAAA+CGG + chr6.2:16995093-16995112 None:intergenic 30.0%
GTTCTTTCCAAAAAACCATT+TGG + chr6.2:16995513-16995532 None:intergenic 30.0%
TATGAAACAGTAAATGTTCC+TGG - chr6.2:16995030-16995049 MS.gene55502:CDS 30.0%
TTGATCTTTCACAGATAAAC+GGG + chr6.2:16995092-16995111 None:intergenic 30.0%
TTTGACTCATTCCTAATGAT+AGG + chr6.2:16995258-16995277 None:intergenic 30.0%
! CCATTAGAGTATTTACCAAA+TGG - chr6.2:16995495-16995514 MS.gene55502:CDS 30.0%
! TCTGTTCTTTTTGTCTCTTT+TGG - chr6.2:16995333-16995352 MS.gene55502:CDS 30.0%
! TTTCTTCTCTAGCATTGAAA+TGG - chr6.2:16995907-16995926 MS.gene55502:CDS 30.0%
!! AACAATAGAAAATGGACTAG+TGG - chr6.2:16995530-16995549 MS.gene55502:CDS 30.0%
!! CACATCAAGAATTGATTTGT+AGG + chr6.2:16995121-16995140 None:intergenic 30.0%
ACAAAAAGAACAGAACTTGG+TGG + chr6.2:16995327-16995346 None:intergenic 35.0%
ACATGTCAATGTGTTTAAGG+TGG - chr6.2:16995289-16995308 MS.gene55502:CDS 35.0%
ACTCAACTAGTGGAATCAAA+TGG + chr6.2:16994588-16994607 None:intergenic 35.0%
AGAACAGTGAAGTTCATGTT+TGG + chr6.2:16994718-16994737 None:intergenic 35.0%
AGAGAAACCTAGTGTTTATC+CGG - chr6.2:16995227-16995246 MS.gene55502:CDS 35.0%
AGAGAATAAAAAAGCTCCTG+AGG + chr6.2:16994950-16994969 None:intergenic 35.0%
AGTTTAGCAAACTCAACTAG+TGG + chr6.2:16994598-16994617 None:intergenic 35.0%
ATTCTTGGTCATGGATCAAT+TGG - chr6.2:16995579-16995598 MS.gene55502:CDS 35.0%
GAAAAAGACATGCATTGCTA+TGG - chr6.2:16994543-16994562 MS.gene55502:CDS 35.0%
GAGACAAAAAGAACAGAACT+TGG + chr6.2:16995330-16995349 None:intergenic 35.0%
GCAGAACTAGAATGTTTACT+TGG + chr6.2:16995450-16995469 None:intergenic 35.0%
GCTATAAAGAGAATCATGGA+AGG - chr6.2:16995792-16995811 MS.gene55502:CDS 35.0%
TCTATCTTGAAGAACCCTTA+TGG + chr6.2:16995208-16995227 None:intergenic 35.0%
TGCTGAAAACTAAAGCAACT+AGG + chr6.2:16994864-16994883 None:intergenic 35.0%
TTTAGCAACATCATGTGCAT+CGG + chr6.2:16994896-16994915 None:intergenic 35.0%
! CAAAGGTTGATCATGAAACT+GGG - chr6.2:16995742-16995761 MS.gene55502:CDS 35.0%
! TCATACCTTTTCTTTTCCTC+AGG - chr6.2:16994931-16994950 MS.gene55502:intron 35.0%
!! AAGGACTTCAATGTTGACTT+GGG + chr6.2:16994743-16994762 None:intergenic 35.0%
!! CTTTTTGTCTCTTTTGGAAG+TGG - chr6.2:16995339-16995358 MS.gene55502:CDS 35.0%
!! TACTTTCACTGATTTGGAAC+CGG - chr6.2:16995179-16995198 MS.gene55502:CDS 35.0%
!!! GGTTTTTAAGTCATTGTGGT+TGG - chr6.2:16995604-16995623 MS.gene55502:CDS 35.0%
!!! TCTAGTTCTGCCTATTTTAG+TGG - chr6.2:16995459-16995478 MS.gene55502:CDS 35.0%
AAACCTAGTGTTTATCCGGT+TGG - chr6.2:16995231-16995250 MS.gene55502:CDS 40.0%
AACAATGGCCATGCAATCAA+CGG + chr6.2:16995663-16995682 None:intergenic 40.0%
AAGCTCCTGAGGAAAAGAAA+AGG + chr6.2:16994939-16994958 None:intergenic 40.0%
ACAGTGAAGTTCATGTTTGG+TGG + chr6.2:16994715-16994734 None:intergenic 40.0%
ATCCTTTGCTCTGCAAACAA+TGG + chr6.2:16995678-16995697 None:intergenic 40.0%
ATGAGTTTCATCTGTGTTGC+AGG + chr6.2:16994781-16994800 None:intergenic 40.0%
CAGGTTCAAGATTATGTCGA+AGG + chr6.2:16994762-16994781 None:intergenic 40.0%
CCAGTTTCATGATCAACCTT+TGG + chr6.2:16995744-16995763 None:intergenic 40.0%
GAGTGGTCACAAATTCTTGT+GGG - chr6.2:16995413-16995432 MS.gene55502:CDS 40.0%
TAAGTGAGCATGGTTCTTCT+AGG - chr6.2:16995877-16995896 MS.gene55502:CDS 40.0%
TCTTTCACAGATAAACGGGT+CGG + chr6.2:16995088-16995107 None:intergenic 40.0%
TGACCAAGAATCTCAACTTG+TGG + chr6.2:16995570-16995589 None:intergenic 40.0%
TTCCTAATGATAGGTCCAAC+CGG + chr6.2:16995249-16995268 None:intergenic 40.0%
TTGGTCATGGATCAATTGGT+GGG - chr6.2:16995583-16995602 MS.gene55502:CDS 40.0%
TTGTGGTTGGAGTTCAACTT+TGG - chr6.2:16995617-16995636 MS.gene55502:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+CGG - chr6.2:16995633-16995652 MS.gene55502:CDS 40.0%
! CAACTAGGCGAGTTTTTGAA+AGG + chr6.2:16994849-16994868 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG - chr6.2:16995570-16995589 MS.gene55502:CDS 40.0%
! CCAAAGGTTGATCATGAAAC+TGG - chr6.2:16995741-16995760 MS.gene55502:CDS 40.0%
! GAAGGACTTCAATGTTGACT+TGG + chr6.2:16994744-16994763 None:intergenic 40.0%
! GTCAATGTGTTTAAGGTGGT+TGG - chr6.2:16995293-16995312 MS.gene55502:CDS 40.0%
!! AGGACTTCAATGTTGACTTG+GGG + chr6.2:16994742-16994761 None:intergenic 40.0%
!! AGTGTTCAAGATGGATTGCA+TGG + chr6.2:16994689-16994708 None:intergenic 40.0%
!! TTCAAGATGGATTGCATGGA+AGG + chr6.2:16994685-16994704 None:intergenic 40.0%
!! TTTGTCTCTTTTGGAAGTGG+TGG - chr6.2:16995342-16995361 MS.gene55502:CDS 40.0%
!!! CAACTCAACGAGTTAGCTTT+TGG - chr6.2:16995381-16995400 MS.gene55502:CDS 40.0%
!!! GGTGGGTTTTTAAGTCATTG+TGG - chr6.2:16995600-16995619 MS.gene55502:CDS 40.0%
ATCCGGTTGGACCTATCATT+AGG - chr6.2:16995244-16995263 MS.gene55502:CDS 45.0%
ATGTGCTCAAAGTTGCAGTG+AGG - chr6.2:16995718-16995737 MS.gene55502:CDS 45.0%
ATTGCTATGGTTCCTTCACC+TGG - chr6.2:16994556-16994575 MS.gene55502:CDS 45.0%
CGAGTGGTCACAAATTCTTG+TGG - chr6.2:16995412-16995431 MS.gene55502:CDS 45.0%
CGGAGAGGAATAGAAAAACC+AGG + chr6.2:16995051-16995070 None:intergenic 45.0%
CTTGGTCATGGATCAATTGG+TGG - chr6.2:16995582-16995601 MS.gene55502:CDS 45.0%
CTTTCACAGATAAACGGGTC+GGG + chr6.2:16995087-16995106 None:intergenic 45.0%
GATGCAGCTTCATCAAGGTT+TGG + chr6.2:16994988-16995007 None:intergenic 45.0%
GATTGCATGGAAGGAGTTAG+TGG + chr6.2:16994676-16994695 None:intergenic 45.0%
TGAAGAACCCTTATGGCTTC+CGG + chr6.2:16995201-16995220 None:intergenic 45.0%
TGGGAATGAGGAATGCGATA+TGG + chr6.2:16994645-16994664 None:intergenic 45.0%
! ATTTGGAACCGGAAGCCATA+AGG - chr6.2:16995190-16995209 MS.gene55502:CDS 45.0%
! GAGTTCAACTTTGGAGAGTG+TGG - chr6.2:16995626-16995645 MS.gene55502:CDS 45.0%
! GCACCACAAGTTGAGATTCT+TGG - chr6.2:16995564-16995583 MS.gene55502:CDS 45.0%
! TTTGGAACCGGAAGCCATAA+GGG - chr6.2:16995191-16995210 MS.gene55502:CDS 45.0%
!! ATGGACTAGTGGTTGCATCA+TGG - chr6.2:16995541-16995560 MS.gene55502:CDS 45.0%
!! GAGTTGATGCAGCTTCATCA+AGG + chr6.2:16994993-16995012 None:intergenic 45.0%
!! GCTTTTGGTCTAGAATCGAG+TGG - chr6.2:16995396-16995415 MS.gene55502:CDS 45.0%
!! TGGACTAGTGGTTGCATCAT+GGG - chr6.2:16995542-16995561 MS.gene55502:CDS 45.0%
!! TGGTGGAAGAGTGTTCAAGA+TGG + chr6.2:16994698-16994717 None:intergenic 45.0%
AAATGGCTCAGTCCAGGTGA+AGG + chr6.2:16994571-16994590 None:intergenic 50.0%
CAAAGTTGCAGTGAGGCCAA+AGG - chr6.2:16995725-16995744 MS.gene55502:CDS 50.0%
GCATTCCTCATTCCCACACT+TGG - chr6.2:16994649-16994668 MS.gene55502:CDS 50.0%
GCTACTGTGCTAAGTGAGCA+TGG - chr6.2:16995867-16995886 MS.gene55502:CDS 50.0%
GGAAGCTCTTTGATACGGAG+AGG + chr6.2:16995066-16995085 None:intergenic 50.0%
GGAATCAAATGGCTCAGTCC+AGG + chr6.2:16994577-16994596 None:intergenic 50.0%
GGCCATTGTTTGCAGAGCAA+AGG - chr6.2:16995673-16995692 MS.gene55502:CDS 50.0%
GGTCCAACCGGATAAACACT+AGG + chr6.2:16995237-16995256 None:intergenic 50.0%
GGTCGGGAAGCTCTTTGATA+CGG + chr6.2:16995071-16995090 None:intergenic 50.0%
! AGGAGTTAGTGGACCAAGTG+TGG + chr6.2:16994665-16994684 None:intergenic 50.0%
! GGAGTTAGTGGACCAAGTGT+GGG + chr6.2:16994664-16994683 None:intergenic 50.0%
GTGGACCAAGTGTGGGAATG+AGG + chr6.2:16994657-16994676 None:intergenic 55.0%
! ACGGTGTGCCGTTGATTGCA+TGG - chr6.2:16995652-16995671 MS.gene55502:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 16994538 16995935 16994538 ID=MS.gene55502
chr6.2 mRNA 16994538 16995935 16994538 ID=MS.gene55502.t1;Parent=MS.gene55502
chr6.2 exon 16995023 16995935 16995023 ID=MS.gene55502.t1.exon1;Parent=MS.gene55502.t1
chr6.2 CDS 16995023 16995935 16995023 ID=cds.MS.gene55502.t1;Parent=MS.gene55502.t1
chr6.2 exon 16994538 16994695 16994538 ID=MS.gene55502.t1.exon2;Parent=MS.gene55502.t1
chr6.2 CDS 16994538 16994695 16994538 ID=cds.MS.gene55502.t1;Parent=MS.gene55502.t1
Gene Sequence

>MS.gene55502

ATGGAGAAAAAGACATGCATTGCTATGGTTCCTTCACCTGGACTGAGCCATTTGATTCCACTAGTTGAGTTTGCTAAACTATTACTCCAAAATCACAATGAATACCATATCGCATTCCTCATTCCCACACTTGGTCCACTAACTCCTTCCATGCAATCCATCTTGAACACTCTTCCACCAAACATGAACTTCACTGTTCTTCCCCAAGTCAACATTGAAGTCCTTCGACATAATCTTGAACCTGCAACACAGATGAAACTCATAGTGAAACACTCTATTCCATTTCTTCATGAAGAAGTAAAATCACTCCTTTCAAAAACTCGCCTAGTTGCTTTAGTTTTCAGCATGTTTTCAACCGATGCACATGATGTTGCTAAACATTTCAACCTTTTATCATACCTTTTCTTTTCCTCAGGAGCTTTTTTATTCTCTTTATTTCTCACTATTCCAAACCTTGATGAAGCTGCATCAACTCAGTTCTTAGAATCAAGTTATGAAACAGTAAATGTTCCTGGTTTTTCTATTCCTCTCCGTATCAAAGAGCTTCCCGACCCGTTTATCTGTGAAAGATCAAGTGATACCTACAAATCAATTCTTGATGTGTGTCAAAAATTATCATTGTTTGATGGTGTTATTATGAATACTTTCACTGATTTGGAACCGGAAGCCATAAGGGTTCTTCAAGATAGAGAGAAACCTAGTGTTTATCCGGTTGGACCTATCATTAGGAATGAGTCAAATAATGAAGCAAACATGTCAATGTGTTTAAGGTGGTTGGAAAATCAGCCACCAAGTTCTGTTCTTTTTGTCTCTTTTGGAAGTGGTGGAACACTCTCTCAAGATCAACTCAACGAGTTAGCTTTTGGTCTAGAATCGAGTGGTCACAAATTCTTGTGGGTTGTGAGAGCTCCAAGTAAACATTCTAGTTCTGCCTATTTTAGTGGACAAAACAATGATCCATTAGAGTATTTACCAAATGGTTTTTTGGAAAGAACAATAGAAAATGGACTAGTGGTTGCATCATGGGCACCACAAGTTGAGATTCTTGGTCATGGATCAATTGGTGGGTTTTTAAGTCATTGTGGTTGGAGTTCAACTTTGGAGAGTGTGGTTAACGGTGTGCCGTTGATTGCATGGCCATTGTTTGCAGAGCAAAGGATGAATGCAAAATTACTCACTGATGTGCTCAAAGTTGCAGTGAGGCCAAAGGTTGATCATGAAACTGGGATTATAAAACAAGAGGAAGTTGCCAAAGCTATAAAGAGAATCATGGAAGGAGATGAAAGCTTTGAAATTAGAAAGAAAATCAAAGAATTGAGTGTTGGTGCTGCTACTGTGCTAAGTGAGCATGGTTCTTCTAGGAAAGCACTTTCTTCTCTAGCATTGAAATGGCAATAA

Protein sequence

>MS.gene55502.t1

MEKKTCIAMVPSPGLSHLIPLVEFAKLLLQNHNEYHIAFLIPTLGPLTPSMQSILNTLPPNMNFTVLPQVNIEVLRHNLEPATQMKLIVKHSIPFLHEEVKSLLSKTRLVALVFSMFSTDAHDVAKHFNLLSYLFFSSGAFLFSLFLTIPNLDEAASTQFLESSYETVNVPGFSIPLRIKELPDPFICERSSDTYKSILDVCQKLSLFDGVIMNTFTDLEPEAIRVLQDREKPSVYPVGPIIRNESNNEANMSMCLRWLENQPPSSVLFVSFGSGGTLSQDQLNELAFGLESSGHKFLWVVRAPKEVAKAIKRIMEGDESFEIRKKIKELSVGAATVLSEHGSSRKALSSLALKWQ