AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056856


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056856.t1 MTR_1g060490 94.842 349 17 1 1 349 1 348 0.0 661
MS.gene056856.t1 MTR_1g060500 76.716 335 69 4 23 349 26 359 0.0 528
MS.gene056856.t1 MTR_1g060520 69.296 355 71 5 1 349 1 323 1.01e-171 480
MS.gene056856.t1 MTR_7g104220 61.420 324 118 4 23 340 23 345 2.08e-151 430
MS.gene056856.t1 MTR_1g092740 50.621 322 147 5 25 340 25 340 4.46e-111 327
MS.gene056856.t1 MTR_1g092690 43.109 341 181 5 7 340 18 352 4.75e-100 300
MS.gene056856.t1 MTR_1g092760 45.741 317 161 4 38 349 39 349 1.75e-99 298
MS.gene056856.t1 MTR_1g092750 45.806 310 155 5 38 340 40 343 1.32e-95 288
MS.gene056856.t1 MTR_1g060530 78.571 84 18 0 177 260 31 114 1.75e-41 142
MS.gene056856.t1 MTR_8g022810 29.143 350 221 13 9 339 14 355 5.29e-36 134
MS.gene056856.t1 MTR_8g031390 32.154 311 182 12 39 331 38 337 7.24e-36 134
MS.gene056856.t1 MTR_8g031400 31.613 310 186 11 39 331 38 338 2.97e-35 132
MS.gene056856.t1 MTR_2g044100 30.449 312 189 12 39 329 44 348 4.50e-34 129
MS.gene056856.t1 MTR_3g005660 29.310 348 211 11 7 329 5 342 5.26e-33 126
MS.gene056856.t1 MTR_3g098270 30.341 323 178 14 39 330 35 341 5.98e-32 124
MS.gene056856.t1 MTR_1g092710 36.923 195 91 6 149 340 3 168 1.12e-31 117
MS.gene056856.t1 MTR_7g116870 29.412 357 204 14 7 331 11 351 1.57e-31 122
MS.gene056856.t1 MTR_8g031430 30.449 312 187 12 39 331 38 338 6.50e-31 120
MS.gene056856.t1 MTR_4g035353 28.221 326 193 12 39 335 32 345 1.62e-30 119
MS.gene056856.t1 MTR_8g031420 29.355 310 193 11 39 331 36 336 8.54e-29 114
MS.gene056856.t1 MTR_8g031390 31.724 290 169 12 39 310 38 316 1.15e-28 113
MS.gene056856.t1 MTR_1g079530 28.650 363 196 19 10 339 4 336 1.73e-28 114
MS.gene056856.t1 MTR_1g025760 27.224 371 237 14 1 348 42 402 2.16e-28 114
MS.gene056856.t1 MTR_3g052480 27.300 337 204 12 31 339 26 349 2.45e-28 113
MS.gene056856.t1 MTR_8g022790 29.586 338 202 15 12 329 11 332 3.62e-28 113
MS.gene056856.t1 MTR_1g025720 27.747 364 227 14 9 349 5 355 7.21e-28 112
MS.gene056856.t1 MTR_5g084770 28.045 353 215 14 17 344 9 347 8.58e-28 111
MS.gene056856.t1 MTR_1g079540 27.108 332 202 13 34 339 27 344 3.14e-27 110
MS.gene056856.t1 MTR_3g052490 26.786 336 206 13 31 339 25 347 7.05e-27 109
MS.gene056856.t1 MTR_2g017965 27.760 317 190 14 39 333 34 333 7.66e-27 109
MS.gene056856.t1 MTR_3g082830 28.529 333 206 11 39 349 39 361 2.46e-26 107
MS.gene056856.t1 MTR_4g104240 26.611 357 227 11 7 337 10 357 6.28e-26 107
MS.gene056856.t1 MTR_3g052580 25.826 333 212 12 31 339 21 342 1.03e-25 106
MS.gene056856.t1 MTR_5g084750 26.765 340 216 14 12 329 5 333 1.16e-25 105
MS.gene056856.t1 MTR_7g116510 25.294 340 217 13 33 347 20 347 1.18e-25 106
MS.gene056856.t1 MTR_3g052580 25.826 333 212 12 31 339 20 341 1.38e-25 106
MS.gene056856.t1 MTR_0565s0010 27.485 342 203 13 15 331 16 337 1.84e-25 105
MS.gene056856.t1 MTR_2g461580 26.389 360 221 15 7 345 1 337 1.91e-25 105
MS.gene056856.t1 MTR_2g033920 28.754 313 194 12 40 331 37 341 2.21e-25 105
MS.gene056856.t1 MTR_2g015630 26.836 354 227 11 17 341 10 360 2.89e-25 105
MS.gene056856.t1 MTR_5g009100 28.037 321 179 15 40 328 48 348 3.77e-25 105
MS.gene056856.t1 MTR_3g024510 26.571 350 204 14 12 331 16 342 7.60e-25 103
MS.gene056856.t1 MTR_2g015590 26.480 321 205 8 39 331 32 349 8.02e-25 103
MS.gene056856.t1 MTR_2g015580 26.462 325 207 12 39 335 48 368 1.36e-24 103
MS.gene056856.t1 MTR_7g116520 26.875 320 192 14 37 329 33 337 1.40e-24 103
MS.gene056856.t1 MTR_0009s0250 26.765 340 219 12 13 336 6 331 1.44e-24 102
MS.gene056856.t1 MTR_2g015080 27.642 369 214 18 1 336 9 357 2.40e-24 102
MS.gene056856.t1 MTR_4g108690 25.915 328 205 12 40 342 29 343 4.11e-24 102
MS.gene056856.t1 MTR_8g028160 25.201 373 222 12 1 331 1 358 4.19e-24 102
MS.gene056856.t1 MTR_1g069175 25.758 330 207 12 36 339 31 348 5.25e-24 101
MS.gene056856.t1 MTR_5g078210 28.037 321 196 13 40 338 27 334 6.66e-24 101
MS.gene056856.t1 MTR_7g033150 26.016 369 227 13 10 339 7 368 6.98e-24 101
MS.gene056856.t1 MTR_1g024890 25.833 360 220 15 7 339 6 345 7.30e-24 101
MS.gene056856.t1 MTR_3g005650 28.344 314 188 12 39 330 31 329 1.13e-23 100
MS.gene056856.t1 MTR_8g074570 26.989 352 214 15 3 329 10 343 1.34e-23 100
MS.gene056856.t1 MTR_4g056160 28.391 317 192 12 39 330 28 334 1.47e-23 100
MS.gene056856.t1 MTR_7g087190 24.868 378 222 14 9 339 13 375 1.55e-23 100
MS.gene056856.t1 MTR_1g025700 25.895 363 233 15 9 346 18 369 1.70e-23 100
MS.gene056856.t1 MTR_1g025680 28.435 313 194 12 39 330 35 338 2.33e-23 100
MS.gene056856.t1 MTR_8g075230 26.554 354 227 13 5 335 2 345 2.59e-23 99.4
MS.gene056856.t1 MTR_5g074270 27.879 330 198 15 39 340 34 351 2.80e-23 99.8
MS.gene056856.t1 MTR_7g033155 26.478 389 229 14 1 339 1 382 3.97e-23 99.8
MS.gene056856.t1 MTR_3g435540 26.316 323 210 10 40 342 25 339 4.26e-23 99.0
MS.gene056856.t1 MTR_7g116570 26.361 349 212 14 8 329 7 337 4.36e-23 99.0
MS.gene056856.t1 MTR_8g079050 25.938 320 198 14 40 330 39 348 5.84e-23 99.0
MS.gene056856.t1 MTR_5g084790 26.509 381 216 18 1 348 1 350 5.90e-23 98.6
MS.gene056856.t1 MTR_4g122200 29.429 333 198 15 40 347 37 357 7.83e-23 98.2
MS.gene056856.t1 MTR_8g089805 25.816 337 208 10 39 339 41 371 1.13e-22 98.2
MS.gene056856.t1 MTR_5g083040 24.242 330 217 10 33 337 27 348 1.14e-22 97.8
MS.gene056856.t1 MTR_3g114090 27.576 330 207 16 39 346 37 356 1.23e-22 97.8
MS.gene056856.t1 MTR_8g022810 27.011 348 178 13 9 339 14 302 1.90e-22 96.7
MS.gene056856.t1 MTR_3g021460 26.934 349 204 17 7 330 1 323 3.08e-22 96.3
MS.gene056856.t1 MTR_2g084585 27.190 331 209 12 39 347 31 351 3.31e-22 96.3
MS.gene056856.t1 MTR_4g087985 24.650 357 230 15 7 336 9 353 3.93e-22 96.3
MS.gene056856.t1 MTR_5g022630 27.195 353 215 16 9 333 14 352 5.44e-22 95.9
MS.gene056856.t1 MTR_6g021530 24.716 352 228 15 11 339 6 343 5.59e-22 95.9
MS.gene056856.t1 MTR_2g015650 25.770 357 232 10 13 339 3 356 2.48e-21 94.0
MS.gene056856.t1 MTR_8g087890 25.926 351 208 15 9 331 9 335 2.56e-21 94.0
MS.gene056856.t1 MTR_7g116500 25.905 359 211 16 1 328 1 335 2.80e-21 94.0
MS.gene056856.t1 MTR_5g022640 25.938 320 204 13 39 335 44 353 2.85e-21 94.0
MS.gene056856.t1 MTR_8g087870 27.653 311 188 13 39 330 30 322 4.14e-21 93.2
MS.gene056856.t1 MTR_2g033930 27.097 310 201 13 39 330 33 335 1.03e-20 92.4
MS.gene056856.t1 MTR_2g015670 25.378 331 207 10 34 339 27 342 1.25e-20 92.0
MS.gene056856.t1 MTR_3g448360 26.549 339 204 13 35 339 26 353 1.41e-20 92.0
MS.gene056856.t1 MTR_1g025910 26.814 317 202 11 43 339 41 347 1.89e-20 91.7
MS.gene056856.t1 MTR_6g007095 25.000 364 228 12 1 329 1 354 2.48e-20 92.8
MS.gene056856.t1 MTR_6g007095 24.917 301 176 11 59 329 390 670 6.29e-12 67.0
MS.gene056856.t1 MTR_2g017955 29.102 323 181 16 39 335 34 334 2.68e-20 91.3
MS.gene056856.t1 MTR_3g069780 26.488 336 199 15 35 335 27 349 2.85e-20 91.3
MS.gene056856.t1 MTR_1g030275 25.140 358 224 14 15 339 19 365 3.30e-20 90.9
MS.gene056856.t1 MTR_4g019880 25.217 345 214 15 9 329 13 337 4.40e-20 90.5
MS.gene056856.t1 MTR_3g464730 25.982 331 216 12 39 348 29 351 6.63e-20 89.7
MS.gene056856.t1 MTR_7g008060 25.352 355 210 14 9 339 10 333 1.12e-19 89.4
MS.gene056856.t1 MTR_1g030220 24.702 336 214 11 37 339 39 368 1.12e-19 89.7
MS.gene056856.t1 MTR_3g023220 28.435 313 181 14 39 330 34 324 1.33e-19 89.0
MS.gene056856.t1 MTR_3g438030 26.488 336 199 16 35 335 27 349 2.17e-19 88.6
MS.gene056856.t1 MTR_1g030268 24.403 377 235 14 1 340 4 367 4.04e-19 87.8
MS.gene056856.t1 MTR_2g017875 27.879 330 189 15 39 337 35 346 5.24e-19 87.4
MS.gene056856.t1 MTR_7g111780 25.974 308 209 6 39 331 37 340 1.50e-18 85.9
MS.gene056856.t1 MTR_1g030340 25.444 338 206 13 39 339 43 371 1.80e-18 86.3
MS.gene056856.t1 MTR_2g015590 28.631 241 142 7 39 251 32 270 1.88e-18 85.5
MS.gene056856.t1 MTR_8g075220 24.638 345 221 13 32 348 34 367 2.30e-18 85.5
MS.gene056856.t1 MTR_2g043980 24.929 353 210 11 13 335 12 339 3.33e-18 85.1
MS.gene056856.t1 MTR_1g030230 23.120 359 234 12 15 340 12 361 4.47e-18 84.7
MS.gene056856.t1 MTR_8g038680 24.923 325 207 11 39 331 29 348 8.43e-18 84.0
MS.gene056856.t1 MTR_6g007100 24.444 360 216 15 1 329 1 335 1.56e-17 83.2
MS.gene056856.t1 MTR_3g114120 27.103 321 201 13 39 339 48 355 1.90e-17 82.8
MS.gene056856.t1 MTR_2g017925 27.244 312 188 13 39 330 34 326 2.52e-17 82.4
MS.gene056856.t1 MTR_5g093090 24.528 318 204 12 39 331 29 335 3.57e-17 82.0
MS.gene056856.t1 MTR_6g007090 24.217 351 223 11 12 331 16 354 4.28e-17 82.0
MS.gene056856.t1 MTR_8g014910 25.568 352 189 13 39 347 33 354 1.25e-16 80.5
MS.gene056856.t1 MTR_2g100620 25.000 336 211 12 39 347 32 353 1.26e-16 80.5
MS.gene056856.t1 MTR_5g078210 27.376 263 163 11 40 280 27 283 1.30e-16 80.1
MS.gene056856.t1 MTR_2g017915 25.786 318 172 14 39 332 34 311 1.33e-16 80.1
MS.gene056856.t1 MTR_0029s0050 25.688 327 197 14 37 335 29 337 1.71e-16 80.1
MS.gene056856.t1 MTR_2g079080 25.688 327 197 14 37 335 29 337 2.07e-16 79.7
MS.gene056856.t1 MTR_0029s0100 25.688 327 197 14 37 335 29 337 2.11e-16 79.7
MS.gene056856.t1 MTR_8g075200 24.556 338 221 14 32 346 35 361 3.23e-16 79.7
MS.gene056856.t1 MTR_3g463960 24.779 339 204 16 35 335 41 366 4.11e-16 79.0
MS.gene056856.t1 MTR_3g463950 24.779 339 204 16 35 335 41 366 4.11e-16 79.0
MS.gene056856.t1 MTR_3g463970 24.779 339 204 16 35 335 41 366 4.11e-16 79.0
MS.gene056856.t1 MTR_3g463940 24.779 339 204 16 35 335 41 366 4.11e-16 79.0
MS.gene056856.t1 MTR_2g079090 25.688 327 197 14 37 335 29 337 4.11e-16 79.0
MS.gene056856.t1 MTR_7g033165 25.153 326 206 11 39 331 34 354 5.63e-16 78.6
MS.gene056856.t1 MTR_4g056280 24.116 311 210 11 39 330 31 334 2.86e-15 76.3
MS.gene056856.t1 MTR_8g074560 25.552 317 201 13 39 329 32 339 5.37e-15 75.5
MS.gene056856.t1 MTR_3g463930 23.188 345 209 14 35 335 41 373 5.46e-15 75.9
MS.gene056856.t1 MTR_1g079590 29.947 187 107 8 34 198 27 211 5.27e-13 67.8
MS.gene056856.t1 MTR_8g074580 20.812 394 245 13 15 348 23 409 5.64e-13 69.7
MS.gene056856.t1 MTR_7g113860 24.157 356 217 13 23 339 17 358 1.56e-12 68.2
MS.gene056856.t1 MTR_5g087690 23.692 325 203 13 39 338 51 355 1.68e-12 68.2
MS.gene056856.t1 MTR_1g082390 24.789 355 211 10 16 330 12 350 3.81e-12 67.0
MS.gene056856.t1 MTR_8g089805 22.660 203 139 5 153 339 103 303 1.32e-11 65.1
MS.gene056856.t1 MTR_5g093090 24.436 266 176 10 39 282 29 291 8.98e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056856.t1 AT5G03610 55.263 342 144 5 7 341 11 350 2.16e-130 377
MS.gene056856.t1 AT3G09930 48.476 328 160 5 22 341 21 347 4.57e-109 323
MS.gene056856.t1 AT3G09930 48.476 328 160 5 22 341 21 347 4.57e-109 323
MS.gene056856.t1 AT2G36325 39.368 348 188 10 8 339 10 350 2.68e-76 239
MS.gene056856.t1 AT5G03600 38.554 332 189 7 13 339 25 346 1.27e-74 234
MS.gene056856.t1 AT5G03600 39.490 314 176 6 31 339 7 311 4.63e-74 232
MS.gene056856.t1 AT5G03590 36.897 290 133 9 59 341 7 253 2.48e-56 184
MS.gene056856.t1 AT5G03590 32.526 289 116 8 59 341 7 222 8.71e-45 154
MS.gene056856.t1 AT1G53920 30.141 355 222 11 8 343 18 365 4.66e-40 145
MS.gene056856.t1 AT1G28640 29.598 348 208 10 14 330 11 352 3.76e-33 127
MS.gene056856.t1 AT5G03590 39.791 191 107 7 9 195 7 193 3.32e-32 119
MS.gene056856.t1 AT5G41890 29.545 352 203 14 10 331 12 348 6.62e-32 123
MS.gene056856.t1 AT5G08460 29.050 358 214 16 4 330 9 357 2.09e-30 119
MS.gene056856.t1 AT1G33811 28.045 353 198 13 13 329 10 342 3.87e-30 118
MS.gene056856.t1 AT1G20130 27.410 332 210 9 39 345 185 510 5.99e-30 120
MS.gene056856.t1 AT1G20130 27.410 332 210 9 39 345 205 530 6.30e-30 120
MS.gene056856.t1 AT1G20120 30.063 316 189 14 39 332 79 384 1.22e-28 115
MS.gene056856.t1 AT1G06990 27.108 332 205 10 39 345 38 357 1.43e-28 114
MS.gene056856.t1 AT2G31540 27.711 332 204 12 36 340 29 351 1.88e-28 114
MS.gene056856.t1 AT1G58430 27.139 339 216 11 27 342 23 353 1.97e-28 114
MS.gene056856.t1 AT2G27360 28.152 341 187 12 37 335 32 356 2.95e-28 114
MS.gene056856.t1 AT2G30310 25.138 362 238 11 3 342 2 352 3.60e-28 113
MS.gene056856.t1 AT1G28670 27.841 352 220 8 14 335 11 358 4.34e-28 113
MS.gene056856.t1 AT1G28650 27.500 360 212 12 13 335 12 359 6.00e-28 112
MS.gene056856.t1 AT1G59406 27.596 366 220 16 6 347 4 348 1.17e-27 111
MS.gene056856.t1 AT1G59030 27.596 366 220 16 6 347 4 348 1.17e-27 111
MS.gene056856.t1 AT1G58725 27.596 366 220 16 6 347 4 348 1.17e-27 111
MS.gene056856.t1 AT1G71691 29.022 317 181 14 39 329 56 354 1.44e-27 111
MS.gene056856.t1 AT2G40250 27.761 335 190 11 35 335 33 349 4.93e-27 110
MS.gene056856.t1 AT2G04570 27.628 333 207 12 39 348 29 350 7.57e-27 109
MS.gene056856.t1 AT5G42170 25.786 318 211 9 39 339 51 360 7.70e-27 109
MS.gene056856.t1 AT2G19060 28.710 310 195 11 40 335 32 329 1.03e-26 108
MS.gene056856.t1 AT4G01130 27.731 357 212 12 10 331 11 356 1.28e-26 109
MS.gene056856.t1 AT1G54030 26.974 304 193 9 36 329 50 334 1.68e-26 109
MS.gene056856.t1 AT5G33370 26.220 328 206 13 36 339 28 343 2.36e-26 108
MS.gene056856.t1 AT1G54010 27.879 330 212 13 12 329 13 328 4.36e-26 107
MS.gene056856.t1 AT5G18430 27.619 315 198 12 37 329 27 333 5.94e-26 107
MS.gene056856.t1 AT1G54020 28.529 333 205 14 15 334 13 325 8.56e-26 106
MS.gene056856.t1 AT3G14820 27.726 321 206 10 39 342 33 344 1.21e-25 105
MS.gene056856.t1 AT2G30220 25.714 350 228 11 15 342 12 351 1.29e-25 105
MS.gene056856.t1 AT1G71250 27.389 314 194 13 39 329 42 344 1.34e-25 106
MS.gene056856.t1 AT1G75890 27.378 347 217 13 10 332 48 383 2.44e-25 105
MS.gene056856.t1 AT1G75890 27.378 347 217 13 10 332 19 354 2.46e-25 105
MS.gene056856.t1 AT5G40990 28.435 313 196 10 39 329 38 344 4.10e-25 104
MS.gene056856.t1 AT1G54000 26.970 330 215 12 12 329 13 328 4.48e-25 105
MS.gene056856.t1 AT1G20132 26.946 334 212 10 36 347 59 382 7.98e-25 104
MS.gene056856.t1 AT3G14220 29.167 312 196 14 39 337 33 332 1.02e-24 103
MS.gene056856.t1 AT1G58520 26.970 330 201 12 39 347 31 341 1.56e-24 102
MS.gene056856.t1 AT1G58525 26.970 330 201 12 39 347 31 341 1.56e-24 102
MS.gene056856.t1 AT1G28610 26.757 370 212 14 14 341 6 358 2.82e-24 102
MS.gene056856.t1 AT1G28570 25.215 349 228 10 13 332 9 353 4.18e-24 102
MS.gene056856.t1 AT5G45960 27.920 351 207 15 21 340 30 365 5.39e-24 101
MS.gene056856.t1 AT4G28780 27.139 339 213 13 32 347 25 352 5.39e-24 101
MS.gene056856.t1 AT1G29660 27.198 364 212 19 1 335 1 340 5.79e-24 101
MS.gene056856.t1 AT3G14225 27.974 311 200 10 39 329 38 344 7.28e-24 101
MS.gene056856.t1 AT1G75880 27.747 364 230 14 6 346 19 372 7.59e-24 101
MS.gene056856.t1 AT1G28590 26.100 341 205 11 37 341 35 364 7.84e-24 101
MS.gene056856.t1 AT2G24560 24.159 327 216 11 39 342 35 352 8.67e-24 100
MS.gene056856.t1 AT3G04290 25.610 328 208 13 36 339 27 342 1.06e-23 100
MS.gene056856.t1 AT5G33370 30.000 240 146 9 36 255 28 265 1.12e-23 100
MS.gene056856.t1 AT1G75880 27.671 365 230 14 6 346 19 373 1.22e-23 100
MS.gene056856.t1 AT1G28600 26.111 360 215 12 14 335 6 352 1.35e-23 100
MS.gene056856.t1 AT1G75890 26.316 361 216 13 10 332 19 367 1.59e-23 100
MS.gene056856.t1 AT1G75930 24.786 351 218 13 6 335 5 330 1.85e-23 99.8
MS.gene056856.t1 AT3G48460 26.027 365 231 12 1 335 1 356 2.33e-23 100
MS.gene056856.t1 AT3G53100 26.048 334 209 13 39 347 30 350 4.24e-23 99.0
MS.gene056856.t1 AT3G14210 26.807 332 203 14 35 349 33 341 5.68e-23 99.0
MS.gene056856.t1 AT5G37690 25.484 310 205 11 40 331 29 330 6.13e-23 98.6
MS.gene056856.t1 AT4G10950 27.219 338 195 14 39 345 72 389 8.54e-23 98.6
MS.gene056856.t1 AT2G19050 27.673 318 203 12 40 344 33 336 9.66e-23 97.8
MS.gene056856.t1 AT5G45910 26.879 346 216 10 29 339 18 361 9.75e-23 98.2
MS.gene056856.t1 AT2G03980 25.455 330 217 13 39 348 44 364 1.03e-22 98.2
MS.gene056856.t1 AT2G03980 25.455 330 217 13 39 348 44 364 1.03e-22 98.2
MS.gene056856.t1 AT2G03980 25.455 330 217 13 39 348 44 364 1.03e-22 98.2
MS.gene056856.t1 AT2G03980 25.455 330 217 13 39 348 44 364 1.03e-22 98.2
MS.gene056856.t1 AT3G50400 25.000 320 204 12 40 331 36 347 1.07e-22 98.2
MS.gene056856.t1 AT3G14225 26.814 317 204 9 39 331 38 350 1.23e-22 97.8
MS.gene056856.t1 AT1G28580 25.352 355 217 10 15 332 13 356 1.38e-22 97.8
MS.gene056856.t1 AT1G20135 25.148 338 213 10 15 335 12 326 1.42e-22 97.1
MS.gene056856.t1 AT5G45950 26.912 353 221 12 11 347 20 351 4.89e-22 95.9
MS.gene056856.t1 AT1G71120 23.529 323 226 9 39 347 32 347 7.37e-22 95.5
MS.gene056856.t1 AT1G29670 27.246 345 206 15 12 330 9 334 7.38e-22 95.5
MS.gene056856.t1 AT4G10950 26.822 343 186 15 39 345 72 385 8.96e-22 95.9
MS.gene056856.t1 AT1G71691 29.434 265 154 11 39 280 56 310 9.11e-22 94.4
MS.gene056856.t1 AT4G26790 25.806 341 199 13 39 346 30 349 1.15e-21 94.7
MS.gene056856.t1 AT4G26790 25.806 341 199 13 39 346 30 349 1.15e-21 94.7
MS.gene056856.t1 AT5G22810 26.536 358 233 11 13 347 8 358 1.72e-21 94.4
MS.gene056856.t1 AT1G29670 27.171 357 212 16 1 331 69 403 1.90e-21 95.1
MS.gene056856.t1 AT2G23540 26.250 320 197 14 40 330 50 359 1.94e-21 94.7
MS.gene056856.t1 AT3G43570 25.779 353 203 13 13 347 8 319 2.14e-21 93.6
MS.gene056856.t1 AT1G75900 25.208 361 231 14 12 348 19 364 3.13e-21 94.0
MS.gene056856.t1 AT1G31550 26.549 339 205 11 37 341 35 363 3.13e-21 94.0
MS.gene056856.t1 AT5G15720 25.633 316 199 12 39 329 31 335 6.31e-21 92.8
MS.gene056856.t1 AT1G67830 24.332 337 213 9 39 339 31 361 9.34e-21 92.4
MS.gene056856.t1 AT1G73610 25.284 352 216 10 4 335 7 331 1.37e-20 91.7
MS.gene056856.t1 AT2G19010 27.362 307 193 12 39 330 31 322 1.40e-20 91.7
MS.gene056856.t1 AT1G28660 25.779 353 225 9 14 335 11 357 1.55e-20 92.0
MS.gene056856.t1 AT1G74460 25.455 330 204 12 40 342 25 339 1.57e-20 91.7
MS.gene056856.t1 AT2G19010 27.362 307 193 12 39 330 61 352 2.18e-20 91.7
MS.gene056856.t1 AT5G55050 24.179 335 217 12 39 346 40 364 3.47e-20 90.9
MS.gene056856.t1 AT1G53940 26.837 313 201 10 39 329 40 346 3.54e-20 90.9
MS.gene056856.t1 AT2G42990 24.412 340 216 14 14 329 9 331 4.19e-20 90.5
MS.gene056856.t1 AT5G14450 28.049 328 194 15 39 331 42 362 6.23e-20 90.5
MS.gene056856.t1 AT1G23500 25.562 356 209 12 10 335 3 332 7.03e-20 89.7
MS.gene056856.t1 AT1G54030 27.200 250 157 8 37 276 51 285 1.18e-19 88.6
MS.gene056856.t1 AT2G19050 29.876 241 152 9 40 267 33 269 1.25e-19 87.8
MS.gene056856.t1 AT1G75920 27.042 355 214 14 9 339 1 334 2.08e-19 88.2
MS.gene056856.t1 AT3G43550 29.514 288 171 13 15 280 8 285 2.43e-19 87.4
MS.gene056856.t1 AT1G31550 26.844 339 201 13 37 341 35 360 3.34e-19 88.2
MS.gene056856.t1 AT1G28660 25.496 353 225 9 14 335 11 356 3.56e-19 88.2
MS.gene056856.t1 AT5G45670 26.582 316 194 13 40 330 31 333 4.98e-19 87.4
MS.gene056856.t1 AT1G56670 23.295 352 233 8 7 335 13 350 5.60e-19 87.4
MS.gene056856.t1 AT5G03820 25.970 335 210 13 39 347 62 384 7.19e-19 87.4
MS.gene056856.t1 AT5G03820 25.970 335 210 13 39 347 34 356 7.33e-19 87.0
MS.gene056856.t1 AT3G16370 25.378 331 210 12 39 344 31 349 8.08e-19 86.7
MS.gene056856.t1 AT3G26430 25.223 337 210 10 39 339 32 362 4.39e-18 84.7
MS.gene056856.t1 AT3G27950 26.211 351 226 13 16 339 10 354 4.78e-18 84.7
MS.gene056856.t1 AT4G01130 27.181 298 179 10 10 280 11 297 7.92e-18 83.6
MS.gene056856.t1 AT5G03810 24.377 361 230 14 12 347 10 352 9.96e-18 83.6
MS.gene056856.t1 AT5G37690 24.516 310 200 12 40 331 29 322 1.09e-17 83.6
MS.gene056856.t1 AT2G24560 25.874 286 179 11 39 298 35 313 1.85e-17 82.4
MS.gene056856.t1 AT1G75910 25.212 353 219 13 11 339 3 334 4.53e-17 81.6
MS.gene056856.t1 AT5G15720 26.792 265 167 10 39 280 31 291 9.11e-17 80.5
MS.gene056856.t1 AT4G18970 25.633 316 197 13 40 330 30 332 1.82e-16 80.1
MS.gene056856.t1 AT4G18970 25.157 318 196 12 40 330 30 332 2.12e-16 80.1
MS.gene056856.t1 AT1G53940 27.820 266 165 9 39 283 40 299 2.82e-16 79.0
MS.gene056856.t1 AT4G30140 26.230 305 193 12 40 329 35 322 6.60e-16 78.2
MS.gene056856.t1 AT1G75920 26.099 364 209 15 15 339 2 344 7.61e-16 78.2
MS.gene056856.t1 AT1G54790 25.000 372 224 11 9 339 4 361 2.03e-15 77.0
MS.gene056856.t1 AT1G09390 23.729 354 227 10 8 335 11 347 2.31e-15 76.6
MS.gene056856.t1 AT5G63170 23.473 311 204 9 39 332 29 322 3.18e-15 76.3
MS.gene056856.t1 AT1G71691 25.726 241 142 10 112 329 27 253 9.68e-15 73.9
MS.gene056856.t1 AT1G75920 25.249 301 190 11 57 339 23 306 9.91e-15 74.3
MS.gene056856.t1 AT4G16230 28.696 230 141 9 7 218 3 227 3.41e-14 72.0
MS.gene056856.t1 AT1G54020 25.806 248 164 9 96 334 3 239 2.22e-13 70.1
MS.gene056856.t1 AT1G54020 25.806 248 164 9 96 334 3 239 2.22e-13 70.1
MS.gene056856.t1 AT1G54020 25.806 248 164 9 96 334 3 239 2.22e-13 70.1
MS.gene056856.t1 AT3G62280 24.922 321 197 14 39 331 37 341 2.25e-13 70.9
MS.gene056856.t1 AT1G56670 22.744 277 190 5 8 267 14 283 3.37e-12 66.6
MS.gene056856.t1 AT2G04020 25.243 309 163 16 39 329 44 302 3.92e-12 66.6
MS.gene056856.t1 AT4G01130 26.562 192 124 5 155 331 81 270 5.91e-12 65.9
MS.gene056856.t1 AT3G14210 26.761 213 129 9 148 349 17 213 1.85e-11 64.3
MS.gene056856.t1 AT2G04020 26.887 212 133 10 39 233 44 250 2.66e-11 63.5

Find 75 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAACGATCCTTGATATTA+TGG 0.176436 1.1:-46027530 None:intergenic
TCGATTTGAGTTGTCATATT+TGG 0.176525 1.1:-46026936 None:intergenic
CTTGGCTTCTTGGTTTAATT+TGG 0.178730 1.1:-46027439 None:intergenic
TGGTGTGATCCTTGGCTTCT+TGG 0.198536 1.1:-46027449 None:intergenic
ATCCGGAATCAAGTTTCTTT+TGG 0.200030 1.1:+46027637 MS.gene056856:CDS
AAATAATGTTAAGAAATATT+TGG 0.229415 1.1:+46027605 MS.gene056856:CDS
CACCAATCCCTCACAAATTC+AGG 0.309817 1.1:+46026829 MS.gene056856:CDS
ATTGGTTCAATAGGTTGTTA+TGG 0.324824 1.1:-46027410 None:intergenic
CCGTATTTCAAATAATGTTT+AGG 0.330993 1.1:-46026861 None:intergenic
TTCTCTTAAACCCTATGCTT+TGG 0.332248 1.1:-46027287 None:intergenic
AGAAGCTCTAGTACAAAATA+TGG 0.346043 1.1:-46027728 None:intergenic
CCTAAACATTATTTGAAATA+CGG 0.358872 1.1:+46026861 MS.gene056856:CDS
CATCTTCTCATGTCTTTCGC+TGG 0.362737 1.1:+46022387 MS.gene056856:CDS
CCTTATGGCATAACCTTTCC+CGG 0.367441 1.1:+46023000 MS.gene056856:CDS
TGGTCACAGATTGGTTCAAT+AGG 0.385138 1.1:-46027419 None:intergenic
ATTGCTTATGTATCTGTTGC+TGG 0.400846 1.1:+46027017 MS.gene056856:CDS
CTGGTTCTTGTACTTCTCTC+AGG 0.405056 1.1:+46022406 MS.gene056856:CDS
TCCCAAAAGAAACTTGATTC+CGG 0.406703 1.1:-46027639 None:intergenic
GTATTTGATACATTTACTTC+AGG 0.408426 1.1:+46026912 MS.gene056856:CDS
TCCTTGATATTATGGCTTGA+TGG 0.415207 1.1:-46027522 None:intergenic
CCGGGAAAGGTTATGCCATA+AGG 0.417887 1.1:-46023000 None:intergenic
CATTCCATCCAGCTTGTGTT+GGG 0.422271 1.1:-46027671 None:intergenic
GGTTTAATTTGGTCACAGAT+TGG 0.443486 1.1:-46027428 None:intergenic
TCTACCGTCGGAGAATCTTC+CGG 0.453026 1.1:-46023031 None:intergenic
GGTTCATGGAAAGAACCTTA+TGG 0.453293 1.1:+46022985 MS.gene056856:CDS
TTCTTGAATGAGTTGGTTGA+AGG 0.465456 1.1:-46026961 None:intergenic
AATCATTACTTGGCCACAAA+TGG 0.467719 1.1:+46027050 MS.gene056856:CDS
CTAAACATTATTTGAAATAC+GGG 0.470412 1.1:+46026862 MS.gene056856:CDS
GGGTTTAAGAGAATTGTTGT+AGG 0.471266 1.1:+46027297 MS.gene056856:CDS
GCATTCCATCCAGCTTGTGT+TGG 0.477061 1.1:-46027672 None:intergenic
GGAGACTCTTATGTTGATAC+CGG 0.484084 1.1:+46022940 MS.gene056856:CDS
AACTTTGCATATGGTGGTAC+AGG 0.496157 1.1:+46026888 MS.gene056856:CDS
AAATGACTACAATCATTACT+TGG 0.497754 1.1:+46027040 MS.gene056856:CDS
TGATCTCAATCTCAAATACT+TGG 0.498148 1.1:-46026808 None:intergenic
TGTAAAGGTGGTGTGATCCT+TGG 0.506168 1.1:-46027457 None:intergenic
CTGCTTACTCCCGCGCAACA+TGG 0.506554 1.1:-46027555 None:intergenic
TTGATTCATCTCCAAAGCAT+AGG 0.508012 1.1:+46027276 MS.gene056856:CDS
TACGGGATGAACTTTGCATA+TGG 0.509580 1.1:+46026879 MS.gene056856:CDS
TTCCTGAATTTGTGAGGGAT+TGG 0.510692 1.1:-46026831 None:intergenic
TGATTCATCTCCAAAGCATA+GGG 0.512776 1.1:+46027277 MS.gene056856:CDS
TATAATGAGTTGGAGAAGAA+AGG 0.513061 1.1:+46027699 MS.gene056856:CDS
ACCACGGAAGCAATGAAAGA+TGG 0.513483 1.1:-46027234 None:intergenic
CCTTGATATTATGGCTTGAT+GGG 0.522443 1.1:-46027521 None:intergenic
ACCTTTCCCGGAAAACCTGC+CGG 0.522743 1.1:+46023012 MS.gene056856:CDS
GGATTGCACCCAACACAAGC+TGG 0.525339 1.1:+46027663 MS.gene056856:CDS
GGCCACAAATGGCTCTCTCC+CGG 0.526173 1.1:+46027061 MS.gene056856:CDS
CCCATCAAGCCATAATATCA+AGG 0.530604 1.1:+46027521 MS.gene056856:CDS
TACCGGGAGAGAGCCATTTG+TGG 0.536907 1.1:-46027063 None:intergenic
TCCATCTTTCATTGCTTCCG+TGG 0.540916 1.1:+46027233 MS.gene056856:CDS
CGTTTGAAGCCATGTTGCGC+GGG 0.546388 1.1:+46027546 MS.gene056856:CDS
CAATGTTCCTGAATTTGTGA+GGG 0.549183 1.1:-46026836 None:intergenic
TAAATGTACTATTGCAACGT+TGG 0.549562 1.1:-46027371 None:intergenic
GTAAGCAGTCAGTATAATTG+TGG 0.561837 1.1:+46027570 MS.gene056856:CDS
TAAGGTTCTTTCCATGAACC+AGG 0.564705 1.1:-46022982 None:intergenic
TGATATTATGGCTTGATGGG+TGG 0.568675 1.1:-46027518 None:intergenic
GCTTTGGAGATGAATCAAAT+CGG 0.568789 1.1:-46027271 None:intergenic
CCGTCGGAGAATCTTCCGGC+AGG 0.570452 1.1:-46023027 None:intergenic
CAAATTAAACCAAGAAGCCA+AGG 0.572389 1.1:+46027440 MS.gene056856:CDS
GAATGCTGTATATAATGAGT+TGG 0.576438 1.1:+46027689 MS.gene056856:CDS
TCGTTTGAAGCCATGTTGCG+CGG 0.583492 1.1:+46027545 MS.gene056856:CDS
TGCACCCAACACAAGCTGGA+TGG 0.589106 1.1:+46027667 MS.gene056856:CDS
ATTGTTAGGGCTGCAAGCTG+AGG 0.595633 1.1:+46022870 MS.gene056856:intron
ACAATGTTCCTGAATTTGTG+AGG 0.612556 1.1:-46026837 None:intergenic
AATGTCTAGAATTGTAAAGG+TGG 0.614447 1.1:-46027469 None:intergenic
GTCAGTTAAAACTCTACCGT+CGG 0.618067 1.1:-46023043 None:intergenic
GAGGATTGAGCAGTGGTCTG+AGG 0.625641 1.1:-46027345 None:intergenic
GGGATGAACTTTGCATATGG+TGG 0.628835 1.1:+46026882 MS.gene056856:CDS
GTAGGTGCTTTACAACCACT+TGG 0.634865 1.1:+46027315 MS.gene056856:CDS
GGTCGTTGTTTGTTTAACCA+CGG 0.646263 1.1:-46027250 None:intergenic
ACTATTGCAACGTTGGAACG+AGG 0.664844 1.1:-46027364 None:intergenic
TTGGAACGAGGATTGAGCAG+TGG 0.684303 1.1:-46027352 None:intergenic
GCTTGATGGGTGGTTCAACA+CGG 0.696915 1.1:-46027508 None:intergenic
CCTGCCGGAAGATTCTCCGA+CGG 0.737578 1.1:+46023027 MS.gene056856:CDS
GTCTGAGGAAGACATCCAAG+TGG 0.739269 1.1:-46027330 None:intergenic
GGTTGTTATGGAGAGCTACG+AGG 0.763965 1.1:-46027398 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATGTTAAGAAATATT+TGG + chr1.1:46027605-46027624 MS.gene056856:CDS 10.0%
!! AATAAATGTAATTATATAAG+AGG - chr1.1:46026754-46026773 None:intergenic 10.0%
!! AATTTAATTAAGGAAAATTT+AGG + chr1.1:46024001-46024020 MS.gene056856:intron 10.0%
!! AGCATAAAATAAATTAATAA+GGG - chr1.1:46026503-46026522 None:intergenic 10.0%
!! ATAAATAGAGAAATATAATA+CGG - chr1.1:46024279-46024298 None:intergenic 10.0%
!! ATTAAAATGAATTAATTTAC+CGG - chr1.1:46027083-46027102 None:intergenic 10.0%
!! ATTAATTAAGAAAAATCAAT+GGG - chr1.1:46022806-46022825 None:intergenic 10.0%
!! ATTTAAAAATTATAAAAGAG+TGG + chr1.1:46025376-46025395 MS.gene056856:intron 10.0%
!! CTAAAATAATATTAATTCTA+AGG + chr1.1:46026665-46026684 MS.gene056856:intron 10.0%
!! GTAAAAAAAAAAAAAAAAAC+AGG + chr1.1:46024045-46024064 MS.gene056856:intron 10.0%
!! TAAAGAATAAAAAGAATTAA+TGG - chr1.1:46023474-46023493 None:intergenic 10.0%
!! TATAAAAATGTTAAATCATA+TGG + chr1.1:46026637-46026656 MS.gene056856:intron 10.0%
!! TATTAATTAAGAAAAATCAA+TGG - chr1.1:46022807-46022826 None:intergenic 10.0%
!!! AATAGAAAACTATTTTAAAA+TGG - chr1.1:46025430-46025449 None:intergenic 10.0%
!!! AATTCTATTTTTATTAATAG+AGG - chr1.1:46027130-46027149 None:intergenic 10.0%
!!! ATAGAAAACTATTTTAAAAT+GGG - chr1.1:46025429-46025448 None:intergenic 10.0%
!!! ATTATGTTTAATTTCTTAAA+AGG - chr1.1:46023534-46023553 None:intergenic 10.0%
!!! ATTTTAAAATAGTTTTCTAT+TGG + chr1.1:46025429-46025448 MS.gene056856:intron 10.0%
!!! ATTTTATCATATATTTTTGT+AGG - chr1.1:46024666-46024685 None:intergenic 10.0%
!!! CATATTTTAGTTTTTTTTTT+TGG + chr1.1:46026694-46026713 MS.gene056856:intron 10.0%
!!! TTTTATTTGTACAAAAAAAA+AGG - chr1.1:46023730-46023749 None:intergenic 10.0%
!! AAAATTGAATATACGAAAAT+AGG - chr1.1:46024422-46024441 None:intergenic 15.0%
!! ACCAAATATAAAATATATCA+TGG - chr1.1:46024369-46024388 None:intergenic 15.0%
!! ATTGAATATGTAGTAATTAT+AGG + chr1.1:46023801-46023820 MS.gene056856:intron 15.0%
!! GAGCATAAAATAAATTAATA+AGG - chr1.1:46026504-46026523 None:intergenic 15.0%
!! TAAAAAAATATGACAAACTA+TGG - chr1.1:46026437-46026456 None:intergenic 15.0%
!! TTAAAATGAATTAATTTACC+GGG - chr1.1:46027082-46027101 None:intergenic 15.0%
!! TTCAATATACTTTAATAGAA+TGG + chr1.1:46022589-46022608 MS.gene056856:intron 15.0%
!! TTGTCAAAAAAAAAAAAAAC+AGG - chr1.1:46023448-46023467 None:intergenic 15.0%
!! TTTCTTAGTATTTAGAAAAT+AGG + chr1.1:46025582-46025601 MS.gene056856:intron 15.0%
!!! ATATTTTATCAGTAGTTTAT+TGG + chr1.1:46025844-46025863 MS.gene056856:intron 15.0%
!!! ATCTCATATTTTTTTATTGA+TGG + chr1.1:46023824-46023843 MS.gene056856:intron 15.0%
!!! ATTTAGGTTTAAAGAATTAA+TGG + chr1.1:46024017-46024036 MS.gene056856:intron 15.0%
!!! TCCATGATATATTTTATATT+TGG + chr1.1:46024365-46024384 MS.gene056856:intron 15.0%
!!! TTTTATTGAATCATCATTTT+AGG - chr1.1:46023645-46023664 None:intergenic 15.0%
!!! TTTTTTTAAGAATAGAAAAG+TGG - chr1.1:46023753-46023772 None:intergenic 15.0%
!! AAAAAAAAAAAACAGGTTTG+AGG + chr1.1:46024052-46024071 MS.gene056856:intron 20.0%
!! AAAAAAAAAAAACAGGTTTG+AGG - chr1.1:46024071-46024052 None:intergenic 20.0%
!! AAAAAGAATCGTGTATTTAA+TGG + chr1.1:46023882-46023901 MS.gene056856:intron 20.0%
!! AAATCCATATTTCTTCATTA+TGG + chr1.1:46023910-46023929 MS.gene056856:intron 20.0%
!! AATTCACAAAGAATTAATTC+AGG - chr1.1:46026177-46026196 None:intergenic 20.0%
!! AATTTCATTTAATATACGCA+GGG + chr1.1:46027207-46027226 MS.gene056856:intron 20.0%
!! ACGTTTCTTAATTAAAAAGA+GGG - chr1.1:46023780-46023799 None:intergenic 20.0%
!! ATAATAACGTTACATTTATG+TGG + chr1.1:46026780-46026799 MS.gene056856:intron 20.0%
!! TAATTTCATTTAATATACGC+AGG + chr1.1:46027206-46027225 MS.gene056856:intron 20.0%
!! TATGATAAAATTAAAGTGAC+CGG + chr1.1:46024675-46024694 MS.gene056856:intron 20.0%
!!! AAAAATGTCTAGAATTGTAA+AGG - chr1.1:46027475-46027494 None:intergenic 20.0%
!!! ACTTCTAAAAATCTATTTAG+TGG - chr1.1:46025319-46025338 None:intergenic 20.0%
!!! ATATTTGGTTTGTAAAAATC+CGG + chr1.1:46027620-46027639 MS.gene056856:CDS 20.0%
!!! ATCAACCATAGTTTATTTTT+AGG + chr1.1:46026402-46026421 MS.gene056856:intron 20.0%
!!! CACAATACAATATAGTATTT+TGG + chr1.1:46022684-46022703 MS.gene056856:intron 20.0%
!!! CCTAAACATTATTTGAAATA+CGG + chr1.1:46026861-46026880 MS.gene056856:CDS 20.0%
!!! CTAAACATTATTTGAAATAC+GGG + chr1.1:46026862-46026881 MS.gene056856:CDS 20.0%
!!! GATTTTTCAATCAAAGATTT+GGG - chr1.1:46024735-46024754 None:intergenic 20.0%
!!! TATTATAAGTTTTGAGATGT+GGG + chr1.1:46024296-46024315 MS.gene056856:intron 20.0%
!!! TCAACCATAGTTTATTTTTA+GGG + chr1.1:46026403-46026422 MS.gene056856:intron 20.0%
!!! TTAATTCATTTTAATCTGAG+CGG + chr1.1:46027088-46027107 MS.gene056856:intron 20.0%
!!! TTATTATAAGTTTTGAGATG+TGG + chr1.1:46024295-46024314 MS.gene056856:intron 20.0%
!!! TTTTGTTAAAATTCATGTAG+AGG - chr1.1:46027186-46027205 None:intergenic 20.0%
! AAATGACTACAATCATTACT+TGG + chr1.1:46027040-46027059 MS.gene056856:CDS 25.0%
! AAATTAATAAGGGTAGTAGT+TGG - chr1.1:46026493-46026512 None:intergenic 25.0%
! ACAACTAAAAAAATCGATAG+AGG + chr1.1:46025791-46025810 MS.gene056856:intron 25.0%
! ATGCTATTAACATAATCAAC+TGG + chr1.1:46023104-46023123 MS.gene056856:intron 25.0%
! ATTGTTATATCCAGGAATTA+AGG - chr1.1:46025916-46025935 None:intergenic 25.0%
! CACGTTTCTTAATTAAAAAG+AGG - chr1.1:46023781-46023800 None:intergenic 25.0%
! CCGTATTTCAAATAATGTTT+AGG - chr1.1:46026864-46026883 None:intergenic 25.0%
! CGTTTCTTAATTAAAAAGAG+GGG - chr1.1:46023779-46023798 None:intergenic 25.0%
! CTTAGTATTTAGAAAATAGG+TGG + chr1.1:46025585-46025604 MS.gene056856:intron 25.0%
! GGAACAAGTTAAAATAAAAG+GGG - chr1.1:46022785-46022804 None:intergenic 25.0%
! GGGAACAAGTTAAAATAAAA+GGG - chr1.1:46022786-46022805 None:intergenic 25.0%
! GTATTTGATACATTTACTTC+AGG + chr1.1:46026912-46026931 MS.gene056856:CDS 25.0%
! TAACCCCTAAAAATAAACTA+TGG - chr1.1:46026410-46026429 None:intergenic 25.0%
! TAACTGCCGAATTATAAAAT+CGG - chr1.1:46024159-46024178 None:intergenic 25.0%
! TGGGAACAAGTTAAAATAAA+AGG - chr1.1:46022787-46022806 None:intergenic 25.0%
! TTATCTGATTCACATATTGA+AGG - chr1.1:46025209-46025228 None:intergenic 25.0%
!! AAAACGAACAATTCTTTTGT+AGG - chr1.1:46022919-46022938 None:intergenic 25.0%
!! AAATAGTTTTCTATTGGAGA+TGG + chr1.1:46025435-46025454 MS.gene056856:intron 25.0%
!! ACAAAAGAATTGTTCGTTTT+TGG + chr1.1:46022919-46022938 MS.gene056856:CDS 25.0%
!! GATTACAAAGCATTCTTAAT+CGG + chr1.1:46025094-46025113 MS.gene056856:intron 25.0%
!!! ACCTTTTAAGATGAATAAGT+GGG + chr1.1:46025876-46025895 MS.gene056856:intron 25.0%
!!! ATTATAAGTTTTGAGATGTG+GGG + chr1.1:46024297-46024316 MS.gene056856:intron 25.0%
!!! CAACCATAGTTTATTTTTAG+GGG + chr1.1:46026404-46026423 MS.gene056856:intron 25.0%
!!! CATGTTTGTTTTTGAGATAT+AGG - chr1.1:46022506-46022525 None:intergenic 25.0%
!!! CGATTTTTCAATCAAAGATT+TGG - chr1.1:46024736-46024755 None:intergenic 25.0%
!!! CTTTTTTCTTTCTCTTTTCT+TGG + chr1.1:46023145-46023164 MS.gene056856:intron 25.0%
!!! TATTGCTTTGTTTTTCTTTG+AGG + chr1.1:46025963-46025982 MS.gene056856:intron 25.0%
!!! TTTTAGAAGTGTTGTATTAG+AGG + chr1.1:46025329-46025348 MS.gene056856:intron 25.0%
AAAAAAGTAAACCTGGTTCA+TGG + chr1.1:46022971-46022990 MS.gene056856:CDS 30.0%
AAAATGTCATTGAGAGTTTG+AGG + chr1.1:46026280-46026299 MS.gene056856:intron 30.0%
AAATGTCATTGAGAGTTTGA+GGG + chr1.1:46026281-46026300 MS.gene056856:intron 30.0%
AGAAACTGGAAGTAAAAACT+AGG + chr1.1:46024974-46024993 MS.gene056856:intron 30.0%
ATGTGATCAGATTCAAAACT+AGG - chr1.1:46026053-46026072 None:intergenic 30.0%
ATTTCATCATCTAAGTGTGA+TGG - chr1.1:46024837-46024856 None:intergenic 30.0%
CTCTCGTATTTCTTCATTTA+TGG - chr1.1:46023590-46023609 None:intergenic 30.0%
GAAAATCATACACATACACA+TGG - chr1.1:46022563-46022582 None:intergenic 30.0%
GAATGCTGTATATAATGAGT+TGG + chr1.1:46027689-46027708 MS.gene056856:CDS 30.0%
GTTGCCATAATGAAGAAATA+TGG - chr1.1:46023917-46023936 None:intergenic 30.0%
TAAATGTACTATTGCAACGT+TGG - chr1.1:46027374-46027393 None:intergenic 30.0%
TAATAGCATTAGAGAGAGAT+GGG - chr1.1:46023093-46023112 None:intergenic 30.0%
TAGAGGATTTGATGCTTATT+AGG + chr1.1:46025346-46025365 MS.gene056856:intron 30.0%
TATGCGTTTCGAATTAATTC+AGG + chr1.1:46023241-46023260 MS.gene056856:intron 30.0%
TCAAACGATCCTTGATATTA+TGG - chr1.1:46027533-46027552 None:intergenic 30.0%
TCCAAGTTAACAGCATATAA+CGG + chr1.1:46024633-46024652 MS.gene056856:intron 30.0%
TGATCTCAATCTCAAATACT+TGG - chr1.1:46026811-46026830 None:intergenic 30.0%
TTAACTACCGAGGAAAAATT+CGG + chr1.1:46023363-46023382 MS.gene056856:intron 30.0%
TTAATAGCATTAGAGAGAGA+TGG - chr1.1:46023094-46023113 None:intergenic 30.0%
! AAAAGACGTTTTTATCCCTT+CGG + chr1.1:46023307-46023326 MS.gene056856:intron 30.0%
! AAGTCTTCTGTGTACAATTT+TGG + chr1.1:46025991-46026010 MS.gene056856:intron 30.0%
! AATGTCTAGAATTGTAAAGG+TGG - chr1.1:46027472-46027491 None:intergenic 30.0%
! AGACATTTTCTTGAATGAGT+TGG - chr1.1:46026971-46026990 None:intergenic 30.0%
! AGTGATTTTCACATAGATCT+AGG - chr1.1:46024873-46024892 None:intergenic 30.0%
! ATTGGTTCAATAGGTTGTTA+TGG - chr1.1:46027413-46027432 None:intergenic 30.0%
! CTTTTGTAGGATGATATTTG+AGG - chr1.1:46022906-46022925 None:intergenic 30.0%
! TATAATGAGTTGGAGAAGAA+AGG + chr1.1:46027699-46027718 MS.gene056856:CDS 30.0%
! TCAAACTCTCAATGACATTT+TGG - chr1.1:46026281-46026300 None:intergenic 30.0%
! TCTTCACCATATTTTGTACT+AGG + chr1.1:46027722-46027741 MS.gene056856:CDS 30.0%
!! ACATCTTGTTGTTCATTGTT+AGG + chr1.1:46022856-46022875 MS.gene056856:intron 30.0%
!! CATCTTGTTGTTCATTGTTA+GGG + chr1.1:46022857-46022876 MS.gene056856:intron 30.0%
!! TCGATTTGAGTTGTCATATT+TGG - chr1.1:46026939-46026958 None:intergenic 30.0%
!! TTCATCCTTTACGTTTTTAG+CGG - chr1.1:46024599-46024618 None:intergenic 30.0%
!!! AGAGTTTTAACTGACTTCAT+TGG + chr1.1:46023051-46023070 MS.gene056856:CDS 30.0%
!!! ATAGTATTTTGGTGTGAATC+AGG + chr1.1:46022695-46022714 MS.gene056856:intron 30.0%
!!! ATGAACCAGGTTTACTTTTT+TGG - chr1.1:46022972-46022991 None:intergenic 30.0%
!!! ATGCTTTTGCTTCTAGTTTA+CGG - chr1.1:46026582-46026601 None:intergenic 30.0%
!!! CACCTTTTAAGATGAATAAG+TGG + chr1.1:46025875-46025894 MS.gene056856:intron 30.0%
!!! CCTTTTAAGATGAATAAGTG+GGG + chr1.1:46025877-46025896 MS.gene056856:intron 30.0%
!!! TAGTTTTGAATCTGATCACA+TGG + chr1.1:46026052-46026071 MS.gene056856:intron 30.0%
!!! TGAACCAGGTTTACTTTTTT+GGG - chr1.1:46022971-46022990 None:intergenic 30.0%
AAAGCACAAGAAAGGTAAAG+TGG - chr1.1:46024343-46024362 None:intergenic 35.0%
AACACCCAAAAAAGTAAACC+TGG + chr1.1:46022964-46022983 MS.gene056856:CDS 35.0%
AATCATTACTTGGCCACAAA+TGG + chr1.1:46027050-46027069 MS.gene056856:CDS 35.0%
ACAATGTTCCTGAATTTGTG+AGG - chr1.1:46026840-46026859 None:intergenic 35.0%
ACAGAGAGAAAAAGATGATG+AGG + chr1.1:46024906-46024925 MS.gene056856:intron 35.0%
ACTTCCAGTTTCTTCATTGA+GGG - chr1.1:46024967-46024986 None:intergenic 35.0%
AGAGAGAAAAAGATGATGAG+GGG + chr1.1:46024908-46024927 MS.gene056856:intron 35.0%
ATAAAAGGGGAATGTATTGC+AGG - chr1.1:46022772-46022791 None:intergenic 35.0%
ATGACCTGTGAAAATGAATG+AGG - chr1.1:46025478-46025497 None:intergenic 35.0%
ATTGCTTATGTATCTGTTGC+TGG + chr1.1:46027017-46027036 MS.gene056856:CDS 35.0%
CAAATTAAACCAAGAAGCCA+AGG + chr1.1:46027440-46027459 MS.gene056856:CDS 35.0%
CAATGTTCCTGAATTTGTGA+GGG - chr1.1:46026839-46026858 None:intergenic 35.0%
CAGAGAGAAAAAGATGATGA+GGG + chr1.1:46024907-46024926 MS.gene056856:intron 35.0%
CCCCACTTATTCATCTTAAA+AGG - chr1.1:46025880-46025899 None:intergenic 35.0%
CCTTGATATTATGGCTTGAT+GGG - chr1.1:46027524-46027543 None:intergenic 35.0%
CTGAGGAAATCTGAAAACTT+CGG + chr1.1:46023396-46023415 MS.gene056856:intron 35.0%
CTTGGCTTCTTGGTTTAATT+TGG - chr1.1:46027442-46027461 None:intergenic 35.0%
GACAATGCATTGTTATATCC+AGG - chr1.1:46025924-46025943 None:intergenic 35.0%
GGGTTTAAGAGAATTGTTGT+AGG + chr1.1:46027297-46027316 MS.gene056856:CDS 35.0%
GTAAGCAGTCAGTATAATTG+TGG + chr1.1:46027570-46027589 MS.gene056856:CDS 35.0%
TAACTGCCGAATTATGAAAC+CGG + chr1.1:46023334-46023353 MS.gene056856:intron 35.0%
TACTTCCAGTTTCTTCATTG+AGG - chr1.1:46024968-46024987 None:intergenic 35.0%
TCCCAAAAGAAACTTGATTC+CGG - chr1.1:46027642-46027661 None:intergenic 35.0%
TCCTTGATATTATGGCTTGA+TGG - chr1.1:46027525-46027544 None:intergenic 35.0%
TCTTTGTGAATTCCTCACTT+TGG + chr1.1:46026185-46026204 MS.gene056856:intron 35.0%
TGACCTGTGAAAATGAATGA+GGG - chr1.1:46025477-46025496 None:intergenic 35.0%
TGATTCATCTCCAAAGCATA+GGG + chr1.1:46027277-46027296 MS.gene056856:CDS 35.0%
TTAACTACCGAGGAAAACTT+CGG - chr1.1:46024130-46024149 None:intergenic 35.0%
TTCTCTTAAACCCTATGCTT+TGG - chr1.1:46027290-46027309 None:intergenic 35.0%
TTGATTCATCTCCAAAGCAT+AGG + chr1.1:46027276-46027295 MS.gene056856:CDS 35.0%
! AAAAGACGTTTTTACCCCTT+CGG - chr1.1:46024186-46024205 None:intergenic 35.0%
! AAACAGGTTTGAGGTTTCTT+CGG - chr1.1:46023432-46023451 None:intergenic 35.0%
! AGATAAACGTTAAGAGCATG+TGG - chr1.1:46026224-46026243 None:intergenic 35.0%
! ATCCGGAATCAAGTTTCTTT+TGG + chr1.1:46027637-46027656 MS.gene056856:CDS 35.0%
! CATGGATAAAAGCACAAGAA+AGG - chr1.1:46024351-46024370 None:intergenic 35.0%
! TCCGGAATCAAGTTTCTTTT+GGG + chr1.1:46027638-46027657 MS.gene056856:CDS 35.0%
! TTAACTGCCGAATTTTTCCT+CGG - chr1.1:46023373-46023392 None:intergenic 35.0%
!! AACTAGAAGCAAAAGCATTG+TGG + chr1.1:46026584-46026603 MS.gene056856:intron 35.0%
!! CTGCAGCCGATTTTATAATT+CGG + chr1.1:46024150-46024169 MS.gene056856:intron 35.0%
!! GAATCAAGTTTCTTTTGGGA+TGG + chr1.1:46027642-46027661 MS.gene056856:CDS 35.0%
!! GCTTTGGAGATGAATCAAAT+CGG - chr1.1:46027274-46027293 None:intergenic 35.0%
!! GGTTTAATTTGGTCACAGAT+TGG - chr1.1:46027431-46027450 None:intergenic 35.0%
!! TTCTTGAATGAGTTGGTTGA+AGG - chr1.1:46026964-46026983 None:intergenic 35.0%
!! TTGACACATTAGCTTTGACT+AGG - chr1.1:46024219-46024238 None:intergenic 35.0%
!!! TTTACTTTTTTGGGTGTTGC+CGG - chr1.1:46022962-46022981 None:intergenic 35.0%
AAATGAACACCGCAAGAAGA+CGG + chr1.1:46024773-46024792 MS.gene056856:intron 40.0%
AACACAATCACCACACAATG+AGG - chr1.1:46024398-46024417 None:intergenic 40.0%
AACTTTGCATATGGTGGTAC+AGG + chr1.1:46026888-46026907 MS.gene056856:CDS 40.0%
CAACACCGCTAAAAACGTAA+AGG + chr1.1:46024591-46024610 MS.gene056856:intron 40.0%
CCCATCAAGCCATAATATCA+AGG + chr1.1:46027521-46027540 MS.gene056856:CDS 40.0%
CCGAGGAAAATTGAAAGCTT+CGG - chr1.1:46024097-46024116 None:intergenic 40.0%
CTGGAAGTAAAAACTAGGAC+CGG + chr1.1:46024979-46024998 MS.gene056856:intron 40.0%
CTTCCAGTTTCTTCATTGAG+GGG - chr1.1:46024966-46024985 None:intergenic 40.0%
GAGAGAAAAAGATGATGAGG+GGG + chr1.1:46024909-46024928 MS.gene056856:intron 40.0%
GAGCATGTGGTTAAGCATAT+AGG - chr1.1:46026211-46026230 None:intergenic 40.0%
GCCGTTATATGCTGTTAACT+TGG - chr1.1:46024637-46024656 None:intergenic 40.0%
GGAGACTCTTATGTTGATAC+CGG + chr1.1:46022940-46022959 MS.gene056856:CDS 40.0%
GGTCGTTGTTTGTTTAACCA+CGG - chr1.1:46027253-46027272 None:intergenic 40.0%
GGTTCATGGAAAGAACCTTA+TGG + chr1.1:46022985-46023004 MS.gene056856:CDS 40.0%
GTCAGTTAAAACTCTACCGT+CGG - chr1.1:46023046-46023065 None:intergenic 40.0%
TAAAGTGACCGGAATATCCA+TGG + chr1.1:46024686-46024705 MS.gene056856:intron 40.0%
TAAGCATATAGGCCAAAGTG+AGG - chr1.1:46026200-46026219 None:intergenic 40.0%
TAAGGTTCTTTCCATGAACC+AGG - chr1.1:46022985-46023004 None:intergenic 40.0%
TACGGGATGAACTTTGCATA+TGG + chr1.1:46026879-46026898 MS.gene056856:CDS 40.0%
TAGAGAGAGATGGGTGAAAT+AGG - chr1.1:46023084-46023103 None:intergenic 40.0%
TCATTGAGAGTTTGAGGGAT+TGG + chr1.1:46026286-46026305 MS.gene056856:intron 40.0%
TGATATTATGGCTTGATGGG+TGG - chr1.1:46027521-46027540 None:intergenic 40.0%
TTCCTGAATTTGTGAGGGAT+TGG - chr1.1:46026834-46026853 None:intergenic 40.0%
! AAACAGGTTTGAGGTTTCCT+CGG + chr1.1:46024061-46024080 MS.gene056856:intron 40.0%
! ACTCCCTCATTCATTTTCAC+AGG + chr1.1:46025471-46025490 MS.gene056856:intron 40.0%
! CATTTTCACAGGTCATTCGT+TGG + chr1.1:46025482-46025501 MS.gene056856:intron 40.0%
! CCGAAGCTTTCAATTTTCCT+CGG + chr1.1:46024094-46024113 MS.gene056856:intron 40.0%
! TGCTGTTGACACATTAGCTT+TGG + chr1.1:46023269-46023288 MS.gene056856:intron 40.0%
! TGGTCACAGATTGGTTCAAT+AGG - chr1.1:46027422-46027441 None:intergenic 40.0%
! TGTGGGGTTTATTTCTTCGT+TGG + chr1.1:46024313-46024332 MS.gene056856:intron 40.0%
! TTTACTGCCGAAGTTTTCCT+CGG + chr1.1:46024120-46024139 MS.gene056856:intron 40.0%
! TTTGATTTCCCGTCTTCTTG+CGG - chr1.1:46024785-46024804 None:intergenic 40.0%
!! TTGACACATTAGCTTTGGCT+AGG + chr1.1:46023274-46023293 MS.gene056856:intron 40.0%
AAAGCAATAGCAATCCCGTG+AGG - chr1.1:46025952-46025971 None:intergenic 45.0%
AATGAACACCGCAAGAAGAC+GGG + chr1.1:46024774-46024793 MS.gene056856:intron 45.0%
AATTCGGCAGTTAACTGCTG+AGG + chr1.1:46023379-46023398 MS.gene056856:intron 45.0%
ACCACGGAAGCAATGAAAGA+TGG - chr1.1:46027237-46027256 None:intergenic 45.0%
ACTATTGCAACGTTGGAACG+AGG - chr1.1:46027367-46027386 None:intergenic 45.0%
ATGCATTGTCGCTATCCTCA+CGG + chr1.1:46025934-46025953 MS.gene056856:intron 45.0%
ATTCGGCAGTTAACTACCGA+AGG + chr1.1:46024167-46024186 MS.gene056856:intron 45.0%
ATTCGGCAGTTAACTACCGA+AGG - chr1.1:46024186-46024167 None:intergenic 45.0%
CACCAATCCCTCACAAATTC+AGG + chr1.1:46026829-46026848 MS.gene056856:CDS 45.0%
CATCTTCTCATGTCTTTCGC+TGG + chr1.1:46022387-46022406 MS.gene056856:CDS 45.0%
CATTCCATCCAGCTTGTGTT+GGG - chr1.1:46027674-46027693 None:intergenic 45.0%
CCTTATGGCATAACCTTTCC+CGG + chr1.1:46023000-46023019 MS.gene056856:CDS 45.0%
GATGAATAAGTGGGGAATCG+AGG + chr1.1:46025885-46025904 MS.gene056856:intron 45.0%
GGGATGAACTTTGCATATGG+TGG + chr1.1:46026882-46026901 MS.gene056856:CDS 45.0%
GTAGGTGCTTTACAACCACT+TGG + chr1.1:46027315-46027334 MS.gene056856:CDS 45.0%
TCCAGAGACCATGGATATTC+CGG - chr1.1:46024697-46024716 None:intergenic 45.0%
TCCATCTTTCATTGCTTCCG+TGG + chr1.1:46027233-46027252 MS.gene056856:CDS 45.0%
TGTAAAGGTGGTGTGATCCT+TGG - chr1.1:46027460-46027479 None:intergenic 45.0%
TTCGGCAGTTAACTACCGAA+GGG + chr1.1:46024168-46024187 MS.gene056856:intron 45.0%
TTCGGCAGTTAACTACCGAA+GGG - chr1.1:46024187-46024168 None:intergenic 45.0%
! CTGCAGCCGGTTTCATAATT+CGG - chr1.1:46023343-46023362 None:intergenic 45.0%
! CTGGTTCTTGTACTTCTCTC+AGG + chr1.1:46022406-46022425 MS.gene056856:CDS 45.0%
! CTTCATTGAGGGGTGGTTTT+GGG - chr1.1:46024956-46024975 None:intergenic 45.0%
! TCTTCATTGAGGGGTGGTTT+TGG - chr1.1:46024957-46024976 None:intergenic 45.0%
! TTGTTGTTCGTCGTCTTGTG+CGG - chr1.1:46024813-46024832 None:intergenic 45.0%
!! AAAAACTAGGACCGGCTTGT+TGG + chr1.1:46024987-46025006 MS.gene056856:intron 45.0%
!! TAAAGAATTAAATTTAATTA+AGG + chr1.1:46023991-46024010 MS.gene056856:intron 5.0%
!! TAAAGAATTAAATTTAATTA+AGG - chr1.1:46024010-46023991 None:intergenic 5.0%
!!! TTAATTCTTTAATTATTTTA+TGG - chr1.1:46023982-46024001 None:intergenic 5.0%
ACCGGAATATCCATGGTCTC+TGG + chr1.1:46024693-46024712 MS.gene056856:intron 50.0%
ACTTCGGCAGTAAACTACCG+AGG - chr1.1:46024114-46024133 None:intergenic 50.0%
ATTGTTAGGGCTGCAAGCTG+AGG + chr1.1:46022870-46022889 MS.gene056856:intron 50.0%
CCACCCCTCAATGAAGAAAC+TGG + chr1.1:46024960-46024979 MS.gene056856:intron 50.0%
CCAGTTTCTTCATTGAGGGG+TGG - chr1.1:46024963-46024982 None:intergenic 50.0%
CCGGGAAAGGTTATGCCATA+AGG - chr1.1:46023003-46023022 None:intergenic 50.0%
CGAGGTTCGACCTTAATTCC+TGG + chr1.1:46025903-46025922 MS.gene056856:intron 50.0%
GATGATGAGGGGGTGATTTC+AGG + chr1.1:46024919-46024938 MS.gene056856:intron 50.0%
GCATTCCATCCAGCTTGTGT+TGG - chr1.1:46027675-46027694 None:intergenic 50.0%
GGTTGTTATGGAGAGCTACG+AGG - chr1.1:46027401-46027420 None:intergenic 50.0%
GTCTGAGGAAGACATCCAAG+TGG - chr1.1:46027333-46027352 None:intergenic 50.0%
TCGGCAGTTAACTACCGAAG+GGG + chr1.1:46024169-46024188 MS.gene056856:intron 50.0%
TCTACCGTCGGAGAATCTTC+CGG - chr1.1:46023034-46023053 None:intergenic 50.0%
TGCATTGTCGCTATCCTCAC+GGG + chr1.1:46025935-46025954 MS.gene056856:intron 50.0%
TGGTGTGATCCTTGGCTTCT+TGG - chr1.1:46027452-46027471 None:intergenic 50.0%
TGGTTGTCTGCCTCATTGTG+TGG + chr1.1:46024385-46024404 MS.gene056856:intron 50.0%
TTGGAACGAGGATTGAGCAG+TGG - chr1.1:46027355-46027374 None:intergenic 50.0%
! AATCTTCCGGCAGGTTTTCC+GGG - chr1.1:46023021-46023040 None:intergenic 50.0%
! GAATCTTCCGGCAGGTTTTC+CGG - chr1.1:46023022-46023041 None:intergenic 50.0%
! GCTTGATGGGTGGTTCAACA+CGG - chr1.1:46027511-46027530 None:intergenic 50.0%
! TCGTTTGAAGCCATGTTGCG+CGG + chr1.1:46027545-46027564 MS.gene056856:CDS 50.0%
ACCTTTCCCGGAAAACCTGC+CGG + chr1.1:46023012-46023031 MS.gene056856:CDS 55.0%
CCTCGGTAGTTAACTGCAGC+CGG - chr1.1:46024156-46024137 None:intergenic 55.0%
CGTTGCAGATCCAGAGACCA+TGG - chr1.1:46024706-46024725 None:intergenic 55.0%
GAGGATTGAGCAGTGGTCTG+AGG - chr1.1:46027348-46027367 None:intergenic 55.0%
GGATTGCACCCAACACAAGC+TGG + chr1.1:46027663-46027682 MS.gene056856:CDS 55.0%
TACCGGGAGAGAGCCATTTG+TGG - chr1.1:46027066-46027085 None:intergenic 55.0%
TCGGCTGCAGTTAACTACCG+AGG - chr1.1:46024140-46024159 None:intergenic 55.0%
TGCACCCAACACAAGCTGGA+TGG + chr1.1:46027667-46027686 MS.gene056856:CDS 55.0%
! CGTTTGAAGCCATGTTGCGC+GGG + chr1.1:46027546-46027565 MS.gene056856:CDS 55.0%
!! TAGGACCGGCTTGTTGGAGA+GGG + chr1.1:46024993-46025012 MS.gene056856:intron 55.0%
CCGGCTGCAGTTAACTACCG+AGG + chr1.1:46023353-46023372 MS.gene056856:intron 60.0%
CCTGCCGGAAGATTCTCCGA+CGG + chr1.1:46023027-46023046 MS.gene056856:CDS 60.0%
CTGCTTACTCCCGCGCAACA+TGG - chr1.1:46027558-46027577 None:intergenic 60.0%
GCTTCGGCAGTTAACTGCCG+AGG - chr1.1:46024081-46024100 None:intergenic 60.0%
GGCCACAAATGGCTCTCTCC+CGG + chr1.1:46027061-46027080 MS.gene056856:CDS 60.0%
! TCCGGCAGGTTTTCCGGGAA+AGG - chr1.1:46023016-46023035 None:intergenic 60.0%
!! ACCGGCTTGTTGGAGAGGGA+GGG + chr1.1:46024997-46025016 MS.gene056856:intron 60.0%
!! CTAGGACCGGCTTGTTGGAG+AGG + chr1.1:46024992-46025011 MS.gene056856:intron 60.0%
CCCCTCCCTCTCCAACAAGC+CGG - chr1.1:46025001-46025020 None:intergenic 65.0%
CCGTCGGAGAATCTTCCGGC+AGG - chr1.1:46023030-46023049 None:intergenic 65.0%
!! CCGGCTTGTTGGAGAGGGAG+GGG + chr1.1:46024998-46025017 MS.gene056856:intron 65.0%
!! GACCGGCTTGTTGGAGAGGG+AGG + chr1.1:46024996-46025015 MS.gene056856:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 46022364 46027743 46022364 ID=MS.gene056856
chr1.1 mRNA 46022364 46027743 46022364 ID=MS.gene056856.t1;Parent=MS.gene056856
chr1.1 exon 46022364 46022427 46022364 ID=MS.gene056856.t1.exon1;Parent=MS.gene056856.t1
chr1.1 CDS 46022364 46022427 46022364 ID=cds.MS.gene056856.t1;Parent=MS.gene056856.t1
chr1.1 exon 46022878 46023072 46022878 ID=MS.gene056856.t1.exon2;Parent=MS.gene056856.t1
chr1.1 CDS 46022878 46023072 46022878 ID=cds.MS.gene056856.t1;Parent=MS.gene056856.t1
chr1.1 exon 46026808 46027082 46026808 ID=MS.gene056856.t1.exon3;Parent=MS.gene056856.t1
chr1.1 CDS 46026808 46027082 46026808 ID=cds.MS.gene056856.t1;Parent=MS.gene056856.t1
chr1.1 exon 46027228 46027743 46027228 ID=MS.gene056856.t1.exon4;Parent=MS.gene056856.t1
chr1.1 CDS 46027228 46027743 46027228 ID=cds.MS.gene056856.t1;Parent=MS.gene056856.t1
Gene Sequence

>MS.gene056856

ATGGACTCGTATAAGCAACTTTTCATCTTCTCATGTCTTTCGCTGGTTCTTGTACTTCTCTCAGGTATGTATGATCATGAATTTATCATCATGAAATATTAATATATAATTTTTAGTACAAGTAGCACAAGTATATACTCCTATATCTCAAAAACAAACATGAAGTAAAACAAAATGTCACTATAGCTAAAAAACACCATGTGTATGTGTATGATTTTCAGATGTTTCAATATACTTTAATAGAATGGATTTTGCATCTACAACTAGTTTTAGTCAAAAGAATTACAAAATCAATTTTTGTGAGTGTAAATAATCAAACACACAATACAATATAGTATTTTGGTGTGAATCAGGTATCAACTGTGTGCAACTGCAAAGATTAATCACTCGAATAATTACAATCAACCTGCAATACATTCCCCTTTTATTTTAACTTGTTCCCATTGATTTTTCTTAATTAATATTAGTTAATAAAAAACTGAAACTAATTGTACATCTTGTTGTTCATTGTTAGGGCTGCAAGCTGAGGCAAGTCGTCACCTCAAATATCATCCTACAAAAGAATTGTTCGTTTTTGGAGACTCTTATGTTGATACCGGCAACACCCAAAAAAGTAAACCTGGTTCATGGAAAGAACCTTATGGCATAACCTTTCCCGGAAAACCTGCCGGAAGATTCTCCGACGGTAGAGTTTTAACTGACTTCATTGGTACGTAACCTATTTCACCCATCTCTCTCTAATGCTATTAACATAATCAACTGGAACATTGCAAAGTACATGCTTTTTTCTTTCTCTTTTCTTGGTACAAAAAGTGTACGCTTTTTAATTAACTTATTTTGTTTATATATGTAGTTTTCTAGCTTTCACATGAAAAATTATGCGTTTCGAATTAATTCAGGAAAATTGCTGTTGACACATTAGCTTTGGCTAGGACACACATGTAAAAGACGTTTTTATCCCTTCGGTAGTTAACTGCCGAATTATGAAACCGGCTGCAGTTAACTACCGAGGAAAAATTCGGCAGTTAACTGCTGAGGAAATCTGAAAACTTCGGCAGTTAACTGCCGAAGAAACCTCAAACCTGTTTTTTTTTTTTTTGACAAAAACCATTAATTCTTTTTATTCTTTAAACATAAATTTTCCTTAATTAAATTTAATTCTTTAATCCTTTTAAGAAATTAAACATAATTCTTTTTATGATTTCATTCATGTGATTTTGTTGCCATAAATGAAGAAATACGAGAGATGAATAATATCTGCAATCAGTAGTTAATGAACCTAAAATGATGATTCAATAAAAAAAATGCAACAACAAAAACGTTACAAATGATAGAATAATTATATTTGTAATTATTAGTAATACCTTTTTTTTTGTACAAATAAAACCACTTTTCTATTCTTAAAAAAAAAACCCCTCTTTTTAATTAAGAAACGTGATTGAATATGTAGTAATTATAGGATCTCATATTTTTTTATTGATGGCAACAAAATTATATGAATGAAATCAACAACTTTATAAAAAGAATCGTGTATTTAATGGCAACAAAATCCATATTTCTTCATTATGGCAACAAAATCACATTAATGAAATCATAAAAAGAATTATGTTTAATTCCATAAAATAATTAAAGAATTAAATTTAATTAAGGAAAATTTAGGTTTAAAGAATTAATGGTTTTTGTAAAAAAAAAAAAAAAAACAGGTTTGAGGTTTCCTCGGCAGTTAACTGCCGAAGCTTTCAATTTTCCTCGGTAGTTTACTGCCGAAGTTTTCCTCGGTAGTTAACTGCAGCCGATTTTATAATTCGGCAGTTAACTACCGAAGGGGTAAAAACGTCTTTTACATGTGTGTCCTAGTCAAAGCTAATGTGTCAACAACAATTTTCTTAATTCAGATGCTTTAGTTCTATTACCGTATTATATTTCTCTATTTATTATAAGTTTTGAGATGTGGGGTTTATTTCTTCGTTGGCTTGCCACTTTACCTTTCTTGTGCTTTTATCCATGATATATTTTATATTTGGTTGTCTGCCTCATTGTGTGGTGATTGTGTTGCCTATTTTCGTATATTCAATTTTTGCTTAACATTATCACGTTTCACGTAATTTGACTAAGAGCATCTTTGATAACAGTTTTTTTTTTTTTTTTTTTTTGCATATAAGTAAGTTTTTTTTTTTGACAAAAACAAATTGATATTCATTCATTCAAATCGAGAGATTACATCATTCAACACCGCTAAAAACGTAAAGGATGAATCTGCAAACAAACTTCCAAGTTAACAGCATATAACGGCATAATGCCTACAAAAATATATGATAAAATTAAAGTGACCGGAATATCCATGGTCTCTGGATCTGCAACGTTGACGCCCAAATCTTTGATTGAAAAATCGATCTTTCAAGATGAATAAAATGAACACCGCAAGAAGACGGGAAATCAAACAGCGCCGCACAAGACGACGAACAACAAACCATCACACTTAGATGATGAAATCACAATGAAAAAACCTAGATCTATGTGAAAATCACTTATTTAGATTGAAACAGAGAGAAAAAGATGATGAGGGGGTGATTTCAGGTCAAAAATTGACCCAAAACCACCCCTCAATGAAGAAACTGGAAGTAAAAACTAGGACCGGCTTGTTGGAGAGGGAGGGGAAGAGTGAGAGAGAAAATGAAGTGTTGTTGCATATAAGTAAGTTATGCTTAGTTAATATCTCTTTTAGAGAATGATTACAAAGCATTCTTAATCGGTAGTTTAATATCTCTTTTAGAGAATGATTACAAAGCATTCTTAATCGGTAGTAAGTGAGAGAAAATGCTTATACAAACATACTCTCTCTCCTTCAATATGTGAATCAGATAAATAATTATTTTTTAAAACAAGTTACAATTATTGTGAAAAAAACAGTTATTGTTGACATGTAATGATGTGTATTGATGATAATGAGATCCACTAAATAGATTTTTAGAAGTGTTGTATTAGAGGATTTGATGCTTATTAGGAATTGATATTTAAAAATTATAAAAGAGTGGCGTATGCACATGAAACTTGTTTAAAAACCCATTTTAAAATAGTTTTCTATTGGAGATGGTCTATACATATATACTCCCTCATTCATTTTCACAGGTCATTCGTTGGTTTTAAAGTTAAATACAATATTTTTTGATGAAAAAAGTTATATACAATACAATATTAATTATAATTTTATTAATATTTTTCTTAGTATTTAGAAAATAGGTGGAATGAAATATTAGATTATAGTTAAAATGTATAATAGAAAAAGATAAATAATTTCATTAAAAATTAGCTAATTTTCTATGTTTTTTTTTTGAAAGAGCTAATTTTCTATGTTAAAGAGTAAGATTATCTCTTGTATTCGACTTCAATATAAAAAAGTTTTTGTAAAGAAAGAAACTTTAAAACGACAACTAAAAAAATCGATAGAGGTGTTGCTTTTTGTTACAATAAAGCACATATATATTTTATCAGTAGTTTATTGGTTAGAATTCACCTTTTAAGATGAATAAGTGGGGAATCGAGGTTCGACCTTAATTCCTGGATATAACAATGCATTGTCGCTATCCTCACGGGATTGCTATTGCTTTGTTTTTCTTTGAGGAAAAAAAGTCTTCTGTGTACAATTTTGGAATTCAAAAATAGAAAATCACATTATAAGAACGACACCTAGTTTTGAATCTGATCACATGGAAATCACTTGTTCAATGTAACGTCTAGCTTAAAAATGAGATAGTTTTTTAATTTGTCTTAGTTAATTATGACAACTATTTTAAAATTAGTAGTTTCTTTCCTGAATTAATTCTTTGTGAATTCCTCACTTTGGCCTATATGCTTAACCACATGCTCTTAACGTTTATCTTAACTTCAAGAGTTTTGTCAGAAAAAACAAAAAACCAAAATGTCATTGAGAGTTTGAGGGATTGGAGTGAATATAATATTAATTATGAAGTAGTTTGAAAGCTATGTGTCATTTTTATTGGCATCATGAGATTAGCAAATAAATAAATTAATTAAATTATCAACCATAGTTTATTTTTAGGGGTTATCAACCATAGTTTGTCATATTTTTTTATTAGCGACATAGACGTTTATCATACTTATAATGCCAACTACTACCCTTATTAATTTATTTTATGCTCTTTTGTCATACTAGAAAAAATAAGTAGTTTACTTTTGTTATATTAAATGCAACATCCGTAAACTAGAAGCAAAAGCATTGTGGTAATGTGCACGAGAAGCTTTCATTTTAGCTTATAAAAATGTTAAATCATATGGAACAACTAAAATAATATTAATTCTAAGGAAATAACATATTTTAGTTTTTTTTTTTGGTTACAAAATAACATATTTTAGTATCAAACTGCTTCCTCTTATATAATTACATTTATTTAACTAATAATAACGTTACATTTATGTGGTGCAGCCAAGTATTTGAGATTGAGATCACCAATCCCTCACAAATTCAGGAACATTGTGCCTAAACATTATTTGAAATACGGGATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATTTACTTCAGGACCAAATATGACAACTCAAATCGATTCCTTCAACCAACTCATTCAAGAAAATGTCTATACTCATTCAGATCTCAACAAAGCTATTGCTTATGTATCTGTTGCTGGAAATGACTACAATCATTACTTGGCCACAAATGGCTCTCTCCCGGTAAATTAATTCATTTTAATCTGAGCGGCTGTGAAAACTTCGTACCTCTATTAATAAAAATAGAATTGCTCTCATTTTTCTTCTATAAGTCAATTTCATACCTCTACATGAATTTTAACAAAATAATTTCATTTAATATACGCAGGGTTTTCCATCTTTCATTGCTTCCGTGGTTAAACAAACAACGACCGATTTGATTCATCTCCAAAGCATAGGGTTTAAGAGAATTGTTGTAGGTGCTTTACAACCACTTGGATGTCTTCCTCAGACCACTGCTCAATCCTCGTTCCAACGTTGCAATAGTACATTTAACGACCTCGTAGCTCTCCATAACAACCTATTGAACCAATCTGTGACCAAATTAAACCAAGAAGCCAAGGATCACACCACCTTTACAATTCTAGACATTTTTGACAGTTTCGCATCCGTGTTGAACCACCCATCAAGCCATAATATCAAGGATCGTTTGAAGCCATGTTGCGCGGGAGTAAGCAGTCAGTATAATTGTGGAAGTGTAGATGAAAATAATGTTAAGAAATATTTGGTTTGTAAAAATCCGGAATCAAGTTTCTTTTGGGATGGATTGCACCCAACACAAGCTGGATGGAATGCTGTATATAATGAGTTGGAGAAGAAAGGTCTTCACCATATTTTGTACTAG

Protein sequence

>MS.gene056856.t1

MDSYKQLFIFSCLSLVLVLLSGLQAEASRHLKYHPTKELFVFGDSYVDTGNTQKSKPGSWKEPYGITFPGKPAGRFSDGRVLTDFIAKYLRLRSPIPHKFRNIVPKHYLKYGMNFAYGGTGVFDTFTSGPNMTTQIDSFNQLIQENVYTHSDLNKAIAYVSVAGNDYNHYLATNGSLPGFPSFIASVVKQTTTDLIHLQSIGFKRIVVGALQPLGCLPQTTAQSSFQRCNSTFNDLVALHNNLLNQSVTKLNQEAKDHTTFTILDIFDSFASVLNHPSSHNIKDRLKPCCAGVSSQYNCGSVDENNVKKYLVCKNPESSFFWDGLHPTQAGWNAVYNELEKKGLHHILY