Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55738.t1 | XP_013447102.1 | 98.9 | 351 | 4 | 0 | 1 | 351 | 145 | 495 | 2.60E-193 | 684.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55738.t1 | P92947 | 79.4 | 350 | 70 | 1 | 1 | 350 | 146 | 493 | 5.4e-163 | 575.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55738.t1 | A0A072U5J4 | 98.9 | 351 | 4 | 0 | 1 | 351 | 136 | 486 | 1.9e-193 | 684.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06007 | MS.gene55738 | 0.918852 | 9.34E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55738.t1 | MTR_8g098910 | 98.860 | 351 | 4 | 0 | 1 | 351 | 136 | 486 | 0.0 | 709 |
| MS.gene55738.t1 | MTR_8g098910 | 98.860 | 351 | 4 | 0 | 1 | 351 | 145 | 495 | 0.0 | 708 |
| MS.gene55738.t1 | MTR_8g098910 | 98.714 | 311 | 4 | 0 | 1 | 311 | 145 | 455 | 0.0 | 630 |
| MS.gene55738.t1 | MTR_8g098910 | 98.714 | 311 | 4 | 0 | 1 | 311 | 136 | 446 | 0.0 | 629 |
| MS.gene55738.t1 | MTR_7g034715 | 41.493 | 335 | 177 | 8 | 7 | 332 | 94 | 418 | 4.71e-84 | 263 |
| MS.gene55738.t1 | MTR_1g060620 | 41.818 | 330 | 169 | 7 | 11 | 327 | 99 | 418 | 1.61e-79 | 249 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55738.t1 | AT1G63940 | 79.429 | 350 | 70 | 1 | 1 | 350 | 146 | 493 | 0.0 | 593 |
| MS.gene55738.t1 | AT1G63940 | 79.429 | 350 | 70 | 1 | 1 | 350 | 139 | 486 | 0.0 | 592 |
| MS.gene55738.t1 | AT1G63940 | 78.286 | 350 | 70 | 2 | 1 | 350 | 139 | 482 | 0.0 | 579 |
| MS.gene55738.t1 | AT1G63940 | 78.986 | 276 | 56 | 1 | 1 | 276 | 139 | 412 | 6.04e-166 | 469 |
| MS.gene55738.t1 | AT5G03630 | 41.618 | 346 | 179 | 7 | 11 | 343 | 100 | 435 | 5.72e-89 | 274 |
| MS.gene55738.t1 | AT3G09940 | 40.413 | 339 | 176 | 8 | 4 | 327 | 85 | 412 | 7.79e-83 | 258 |
| MS.gene55738.t1 | AT3G09940 | 40.964 | 332 | 170 | 8 | 11 | 327 | 100 | 420 | 1.23e-82 | 258 |
| MS.gene55738.t1 | AT3G27820 | 39.755 | 327 | 180 | 7 | 7 | 326 | 94 | 410 | 7.61e-79 | 249 |
| MS.gene55738.t1 | AT3G52880 | 41.590 | 327 | 168 | 7 | 11 | 324 | 99 | 415 | 7.25e-77 | 243 |
| MS.gene55738.t1 | AT3G52880 | 41.590 | 327 | 168 | 7 | 11 | 324 | 131 | 447 | 2.20e-76 | 243 |
| MS.gene55738.t1 | AT1G48030 | 26.866 | 201 | 123 | 8 | 24 | 214 | 174 | 360 | 1.79e-11 | 65.5 |
| MS.gene55738.t1 | AT1G48030 | 26.866 | 201 | 123 | 8 | 24 | 214 | 174 | 360 | 1.79e-11 | 65.5 |
| MS.gene55738.t1 | AT1G48030 | 26.866 | 201 | 123 | 8 | 24 | 214 | 174 | 360 | 1.79e-11 | 65.5 |
| MS.gene55738.t1 | AT1G48030 | 26.866 | 201 | 123 | 8 | 24 | 214 | 174 | 360 | 1.79e-11 | 65.5 |
| MS.gene55738.t1 | AT1G48030 | 26.866 | 201 | 123 | 8 | 24 | 214 | 174 | 360 | 1.79e-11 | 65.5 |
Find 85 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGGAGAAACGGTTGAAAT+TGG | 0.238262 | 4.3:-5420187 | MS.gene55738:CDS |
| TATCCTGCATTTCAGGTTGA+TGG | 0.259570 | 4.3:-5420832 | MS.gene55738:intron |
| TCTGGAAAGCTTCTTAAGTA+TGG | 0.270894 | 4.3:-5423253 | MS.gene55738:CDS |
| ATTAGGTTTCCAGATAAAAT+TGG | 0.282978 | 4.3:-5423111 | MS.gene55738:intron |
| CTGTTCCGGACAAGCATTCC+TGG | 0.324547 | 4.3:-5420808 | MS.gene55738:CDS |
| CAAACTTTGACAACAAGTTC+TGG | 0.350397 | 4.3:-5423271 | MS.gene55738:CDS |
| GAGTGAACAATCTTTGTAAA+AGG | 0.353339 | 4.3:+5421887 | None:intergenic |
| AAAACCCTTGAGTAGAAGTA+TGG | 0.356865 | 4.3:+5420412 | None:intergenic |
| ATCAATCGGAGGCTGTCTTC+TGG | 0.360441 | 4.3:+5419678 | None:intergenic |
| GGCTGTCTTCTGGCAAGTTC+AGG | 0.361852 | 4.3:+5419688 | None:intergenic |
| CTTTGTAAAAGGTGATCTTC+AGG | 0.364643 | 4.3:+5421898 | None:intergenic |
| TTCAGGTTGATGGTCTGTTC+CGG | 0.376519 | 4.3:-5420822 | MS.gene55738:intron |
| TGTAGCCGCTTTCCCTTTGA+AGG | 0.382255 | 4.3:-5420767 | MS.gene55738:intron |
| GGGTGCCTCCATTAAAAGTT+TGG | 0.382945 | 4.3:-5421429 | MS.gene55738:CDS |
| AAAATTGGCGGAAACCTATC+TGG | 0.393328 | 4.3:-5423096 | MS.gene55738:CDS |
| TATCTGGTGTTCACTATGTT+CGG | 0.396099 | 4.3:-5423080 | MS.gene55738:CDS |
| AGTTTGGAAGCTAGTTCTAA+TGG | 0.403646 | 4.3:-5421413 | MS.gene55738:CDS |
| GTAGTTGGAGGTGGTTATAT+AGG | 0.417824 | 4.3:-5422648 | MS.gene55738:CDS |
| TTTCAGGTAATTATAGGCAT+TGG | 0.430590 | 4.3:-5421173 | MS.gene55738:intron |
| GAAGAACTCTACCAAAAGAA+TGG | 0.434145 | 4.3:-5421844 | MS.gene55738:CDS |
| AAGAACTCTACCAAAAGAAT+GGG | 0.434278 | 4.3:-5421843 | MS.gene55738:CDS |
| TTGCTGCTGCAGCTGTTGCT+TGG | 0.440762 | 4.3:-5422617 | MS.gene55738:CDS |
| CCTTTGAACAGTTGGAGAAA+CGG | 0.449926 | 4.3:-5420197 | MS.gene55738:intron |
| TCACCAACGGCAAATATTCC+AGG | 0.450460 | 4.3:+5420790 | None:intergenic |
| GTGGGTCCCTTTGAGAGGGT+GGG | 0.453084 | 4.3:-5421137 | MS.gene55738:CDS |
| TGAAGTTTGGCTTTATCAAT+CGG | 0.453211 | 4.3:+5419664 | None:intergenic |
| AAGGAAGCCCTAGAAAAGTA+TGG | 0.455277 | 4.3:-5420381 | MS.gene55738:CDS |
| ATATTCCAGGAATGCTTGTC+CGG | 0.470788 | 4.3:+5420803 | None:intergenic |
| TACTGATGTTGGTGGTATAC+AGG | 0.474240 | 4.3:-5421108 | MS.gene55738:intron |
| GTCTTCTGGCAAGTTCAGGC+AGG | 0.474739 | 4.3:+5419692 | None:intergenic |
| GGTGTTGCTGCTGTGAAACT+TGG | 0.478567 | 4.3:-5421383 | MS.gene55738:CDS |
| TGCTGTGGGTCCCTTTGAGA+GGG | 0.480462 | 4.3:-5421141 | MS.gene55738:CDS |
| ATCTTCCATACTTCTACTCA+AGG | 0.480887 | 4.3:-5420417 | MS.gene55738:CDS |
| ATCTGGTGTTCACTATGTTC+GGG | 0.484399 | 4.3:-5423079 | MS.gene55738:CDS |
| CATGTTCCACTCGAGAAATC+CGG | 0.487129 | 4.3:+5420602 | None:intergenic |
| AAGGGAGTTCTTGTTGAAAG+TGG | 0.487360 | 4.3:-5419944 | MS.gene55738:CDS |
| TGTGGGTCCCTTTGAGAGGG+TGG | 0.493473 | 4.3:-5421138 | MS.gene55738:CDS |
| AGTTAACAGTATACCTTCAA+AGG | 0.502143 | 4.3:+5420754 | None:intergenic |
| CTGCTGTGGGTCCCTTTGAG+AGG | 0.505488 | 4.3:-5421142 | MS.gene55738:CDS |
| GTGGGTTTGAATACTGATGT+TGG | 0.506009 | 4.3:-5421119 | MS.gene55738:CDS |
| AAGATTCCCGAGCAATGTCT+AGG | 0.510266 | 4.3:+5419617 | None:intergenic |
| CATTGGAGCGAAGCCTGCTG+TGG | 0.512600 | 4.3:-5421156 | MS.gene55738:CDS |
| AAATTGGACAGATCTACAAC+CGG | 0.512737 | 4.3:-5420621 | MS.gene55738:intron |
| AGGAGGCCCTAGACATTGCT+CGG | 0.512883 | 4.3:-5419624 | MS.gene55738:CDS |
| TGGAGGTGGTTATATAGGAA+TGG | 0.519829 | 4.3:-5422643 | MS.gene55738:CDS |
| CTCTCAAAGGGACCCACAGC+AGG | 0.521993 | 4.3:+5421143 | None:intergenic |
| GAATGGGGTCAAAATATTGA+AGG | 0.522616 | 4.3:-5421827 | MS.gene55738:intron |
| AAATGCAACCTCAGTGGAGG+AGG | 0.524675 | 4.3:-5419641 | MS.gene55738:CDS |
| ATCTATTGTTGAAGCCGATA+CGG | 0.524804 | 4.3:-5421354 | MS.gene55738:intron |
| TTCAAACCCACCCTCTCAAA+GGG | 0.525859 | 4.3:+5421131 | None:intergenic |
| GAACATAGTGAACACCAGAT+AGG | 0.525885 | 4.3:+5423082 | None:intergenic |
| TCATATCTCCGTGCAAGAGA+AGG | 0.531450 | 4.3:+5421865 | None:intergenic |
| GTTAACAGTATACCTTCAAA+GGG | 0.531790 | 4.3:+5420755 | None:intergenic |
| AGGTTTCCAGATAAAATTGG+CGG | 0.534285 | 4.3:-5423108 | MS.gene55738:CDS |
| TGTTGCAGATGCTGATGCGC+TGG | 0.548090 | 4.3:-5423055 | MS.gene55738:CDS |
| TGTTCACTCCTTCTCTTGCA+CGG | 0.552103 | 4.3:-5421873 | MS.gene55738:CDS |
| ATTCCTGGAATATTTGCCGT+TGG | 0.553532 | 4.3:-5420793 | MS.gene55738:CDS |
| TGATGCGCTGGTTTCATCGT+TGG | 0.555619 | 4.3:-5423043 | MS.gene55738:intron |
| GGATCGCTTATTATCGCTAC+GGG | 0.559989 | 4.3:-5423232 | MS.gene55738:CDS |
| GAAGCTAGTTCTAATGGTAA+CGG | 0.561867 | 4.3:-5421407 | MS.gene55738:CDS |
| AAGGTTGTAGTAGTTGGAGG+TGG | 0.567180 | 4.3:-5422657 | MS.gene55738:CDS |
| ATTCAAACCCACCCTCTCAA+AGG | 0.569035 | 4.3:+5421130 | None:intergenic |
| GCTGCTGTGAAACTTGGAGA+TGG | 0.572397 | 4.3:-5421377 | MS.gene55738:CDS |
| AGGGAGTTCTTGTTGAAAGT+GGG | 0.573102 | 4.3:-5419943 | MS.gene55738:CDS |
| GGAGGCCCTAGACATTGCTC+GGG | 0.578113 | 4.3:-5419623 | MS.gene55738:CDS |
| ATTGGAGCGAAGCCTGCTGT+GGG | 0.582408 | 4.3:-5421155 | MS.gene55738:CDS |
| TCTTCCATACTTCTACTCAA+GGG | 0.588304 | 4.3:-5420416 | MS.gene55738:CDS |
| GGTTTGAATACTGATGTTGG+TGG | 0.591995 | 4.3:-5421116 | MS.gene55738:CDS |
| TGTAGATCATGCTCGCAGAT+CGG | 0.594852 | 4.3:-5420581 | MS.gene55738:CDS |
| AGATTCCCGAGCAATGTCTA+GGG | 0.597044 | 4.3:+5419618 | None:intergenic |
| CTACAACCGGATTTCTCGAG+TGG | 0.609013 | 4.3:-5420608 | MS.gene55738:CDS |
| CTACGGGATGTACAGCCTCA+AGG | 0.614506 | 4.3:-5423216 | MS.gene55738:intron |
| TGGATCGCTTATTATCGCTA+CGG | 0.615296 | 4.3:-5423233 | MS.gene55738:CDS |
| ATACTGCACAGGTAAGCTGA+AGG | 0.625932 | 4.3:-5419963 | MS.gene55738:intron |
| TACTGCACAGGTAAGCTGAA+GGG | 0.630603 | 4.3:-5419962 | MS.gene55738:intron |
| TCAAAATGCAACCTCAGTGG+AGG | 0.632916 | 4.3:-5419644 | MS.gene55738:CDS |
| GTATACCTTCAAAGGGAAAG+CGG | 0.644512 | 4.3:+5420762 | None:intergenic |
| AGTTTGGCTTTATCAATCGG+AGG | 0.650779 | 4.3:+5419667 | None:intergenic |
| ACTTCAAAATGCAACCTCAG+TGG | 0.656573 | 4.3:-5419647 | MS.gene55738:CDS |
| GTCTAGGGCCTCCTCCACTG+AGG | 0.670188 | 4.3:+5419633 | None:intergenic |
| GCTAGTTCTAATGGTAACGG+AGG | 0.676312 | 4.3:-5421404 | MS.gene55738:CDS |
| GAAAGCGGCTACATCACCAA+CGG | 0.696123 | 4.3:+5420777 | None:intergenic |
| TGTTGAAAGTGGGAGCCCTG+AGG | 0.697472 | 4.3:-5419933 | MS.gene55738:intron |
| AGAACTCTACCAAAAGAATG+GGG | 0.712465 | 4.3:-5421842 | MS.gene55738:CDS |
| GAAGCCCTAGAAAAGTATGG+TGG | 0.729332 | 4.3:-5420378 | MS.gene55738:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAGAAATGAA+AGG | + | chr4.3:5422653-5422672 | None:intergenic | 10.0% |
| !! | AAAAAAAAACAACTAATTTC+AGG | + | chr4.3:5422432-5422451 | None:intergenic | 15.0% |
| !! | AGAAAAAAATAAAGTTGTAT+TGG | + | chr4.3:5421253-5421272 | None:intergenic | 15.0% |
| !! | GTAAATATCAATAAAATCAT+TGG | + | chr4.3:5419937-5419956 | None:intergenic | 15.0% |
| !! | TAAAATGTGATTTATTTATC+AGG | - | chr4.3:5420450-5420469 | MS.gene55738:intron | 15.0% |
| !! | TAACAAAGATAATATTTGAA+TGG | + | chr4.3:5420009-5420028 | None:intergenic | 15.0% |
| !! | TGTTAATGTTATTAATAACT+TGG | - | chr4.3:5423073-5423092 | MS.gene55738:CDS | 15.0% |
| !!! | AAATAAATCACATTTTAAAG+AGG | + | chr4.3:5420447-5420466 | None:intergenic | 15.0% |
| !!! | AAATATGATCTATTTTTTAC+AGG | + | chr4.3:5421001-5421020 | None:intergenic | 15.0% |
| !!! | AACAATCAATTTTAATGTAT+AGG | + | chr4.3:5420938-5420957 | None:intergenic | 15.0% |
| !!! | AATAAATCACATTTTAAAGA+GGG | + | chr4.3:5420446-5420465 | None:intergenic | 15.0% |
| !!! | ACAAATTGAAAAACTTTTTT+AGG | + | chr4.3:5420610-5420629 | None:intergenic | 15.0% |
| !!! | TTTTATAATGCTCAAATTAT+TGG | - | chr4.3:5421648-5421667 | MS.gene55738:intron | 15.0% |
| !! | AAATTAACACAGAACTAATT+CGG | + | chr4.3:5423159-5423178 | None:intergenic | 20.0% |
| !! | ATAATGCTCAAATTAAATAG+AGG | + | chr4.3:5421462-5421481 | None:intergenic | 20.0% |
| !! | ATTGATATTTACGTTTATGA+TGG | - | chr4.3:5419945-5419964 | MS.gene55738:CDS | 20.0% |
| !! | CTTTACAATCATTTGATATA+TGG | - | chr4.3:5419983-5420002 | MS.gene55738:intron | 20.0% |
| !! | TATCTGTGTTTCTTAAAAAT+TGG | - | chr4.3:5422282-5422301 | MS.gene55738:intron | 20.0% |
| !! | TTGATATTTACGTTTATGAT+GGG | - | chr4.3:5419946-5419965 | MS.gene55738:CDS | 20.0% |
| !! | TTTATAGCCAAAAATTAAGT+TGG | - | chr4.3:5420173-5420192 | MS.gene55738:CDS | 20.0% |
| !!! | AGATGTTGATTATCAATTTT+TGG | - | chr4.3:5421968-5421987 | MS.gene55738:intron | 20.0% |
| !!! | ATTTTTAAGAAAACAACAGA+AGG | + | chr4.3:5419753-5419772 | None:intergenic | 20.0% |
| !!! | TCTAATTTTCAGGTAATTAT+AGG | - | chr4.3:5421740-5421759 | MS.gene55738:intron | 20.0% |
| !!! | TCTGTTGTTTTCTTAAAAAT+TGG | - | chr4.3:5419753-5419772 | MS.gene55738:intron | 20.0% |
| !!! | TTAGTTCATTTTCTAAAAAG+TGG | + | chr4.3:5420485-5420504 | None:intergenic | 20.0% |
| !!! | TTTATGTCCAACTTAATTTT+TGG | + | chr4.3:5420183-5420202 | None:intergenic | 20.0% |
| !!! | TTTCCATTTTCTTTAATATG+TGG | - | chr4.3:5421598-5421617 | MS.gene55738:intron | 20.0% |
| !!! | TTTCCTACACTATTTTTATT+GGG | - | chr4.3:5420349-5420368 | MS.gene55738:intron | 20.0% |
| !!! | TTTTCCTACACTATTTTTAT+TGG | - | chr4.3:5420348-5420367 | MS.gene55738:intron | 20.0% |
| !!! | TTTTTTTGAAGACATATGAA+AGG | + | chr4.3:5422621-5422640 | None:intergenic | 20.0% |
| ! | AAAGGAAAATTAATAGTGTG+AGG | + | chr4.3:5422707-5422726 | None:intergenic | 25.0% |
| ! | AAATTAAATAGAGGAAAGGA+AGG | + | chr4.3:5421453-5421472 | None:intergenic | 25.0% |
| ! | AGTACTTACTAGTTACAATA+TGG | + | chr4.3:5421153-5421172 | None:intergenic | 25.0% |
| ! | ATGTTTGCAGATAAAATTAG+AGG | - | chr4.3:5422020-5422039 | MS.gene55738:intron | 25.0% |
| ! | ATTAGGTTTCCAGATAAAAT+TGG | - | chr4.3:5419808-5419827 | MS.gene55738:intron | 25.0% |
| ! | ATTTGAGCATTATATTCATC+AGG | - | chr4.3:5421469-5421488 | MS.gene55738:intron | 25.0% |
| ! | CATAAATTAGAGGAAAAATG+AGG | + | chr4.3:5420819-5420838 | None:intergenic | 25.0% |
| ! | GAAAAAGAAATATACCGTAT+CGG | + | chr4.3:5421582-5421601 | None:intergenic | 25.0% |
| ! | GGTGAAATAGAAAAATAGAA+AGG | + | chr4.3:5422677-5422696 | None:intergenic | 25.0% |
| ! | TAACAAGATAGAAGATGAAT+TGG | + | chr4.3:5419789-5419808 | None:intergenic | 25.0% |
| ! | TAGGACATTAACAAGAAAAA+TGG | + | chr4.3:5420585-5420604 | None:intergenic | 25.0% |
| ! | TCAATATTGCTGAATTTCAT+TGG | - | chr4.3:5422461-5422480 | MS.gene55738:intron | 25.0% |
| ! | TGCTCAAAATACAAATTTCT+TGG | - | chr4.3:5420551-5420570 | MS.gene55738:CDS | 25.0% |
| ! | TGTTTGCAGATAAAATTAGA+GGG | - | chr4.3:5422021-5422040 | MS.gene55738:intron | 25.0% |
| ! | TTTGAGCATTATATTCATCA+GGG | - | chr4.3:5421470-5421489 | MS.gene55738:intron | 25.0% |
| ! | TTTGCATAATGTTCAAGATT+AGG | - | chr4.3:5421858-5421877 | MS.gene55738:CDS | 25.0% |
| !! | AAAAGTTGGAGTATTTATTG+AGG | + | chr4.3:5421287-5421306 | None:intergenic | 25.0% |
| !! | AAAGTTGGAGTATTTATTGA+GGG | + | chr4.3:5421286-5421305 | None:intergenic | 25.0% |
| !! | ACTTTCTCTTTCTAATTTTC+AGG | - | chr4.3:5421730-5421749 | MS.gene55738:intron | 25.0% |
| !! | CTAATTTTATCTGCAAACAT+GGG | + | chr4.3:5422020-5422039 | None:intergenic | 25.0% |
| !! | CTTTTCAATGCTTTTCATAT+GGG | - | chr4.3:5420038-5420057 | MS.gene55738:intron | 25.0% |
| !! | TAATTTTATCTGCAAACATG+GGG | + | chr4.3:5422019-5422038 | None:intergenic | 25.0% |
| !! | TCTAATTTTATCTGCAAACA+TGG | + | chr4.3:5422021-5422040 | None:intergenic | 25.0% |
| !! | TCTTTTCAATGCTTTTCATA+TGG | - | chr4.3:5420037-5420056 | MS.gene55738:intron | 25.0% |
| !! | TGTTTGAAACCATAAATTAG+AGG | + | chr4.3:5420829-5420848 | None:intergenic | 25.0% |
| !! | TTAATTTTCCTTTGAACAGT+TGG | - | chr4.3:5422714-5422733 | MS.gene55738:intron | 25.0% |
| !!! | AATTGATTGTTGTTTTCTGA+AGG | - | chr4.3:5420947-5420966 | MS.gene55738:intron | 25.0% |
| !!! | ATCCAAAAAGTAGCTATTTT+AGG | + | chr4.3:5422768-5422787 | None:intergenic | 25.0% |
| !!! | ATCCTAAAATAGCTACTTTT+TGG | - | chr4.3:5422763-5422782 | MS.gene55738:intron | 25.0% |
| !!! | CTCATTTTTCCTCTAATTTA+TGG | - | chr4.3:5420817-5420836 | MS.gene55738:CDS | 25.0% |
| !!! | CTGTTTGTTTTTTTATTTCC+AGG | - | chr4.3:5420228-5420247 | MS.gene55738:intron | 25.0% |
| !!! | TCATCTTCTATCTTGTTATT+AGG | - | chr4.3:5419791-5419810 | MS.gene55738:intron | 25.0% |
| !!! | TGAAAAACTTTTTTAGGCAT+AGG | + | chr4.3:5420604-5420623 | None:intergenic | 25.0% |
| !!! | TTCCTACACTATTTTTATTG+GGG | - | chr4.3:5420350-5420369 | MS.gene55738:intron | 25.0% |
| AAAAGAAACAATGTGGTTCT+TGG | + | chr4.3:5420156-5420175 | None:intergenic | 30.0% | |
| AAAAGAAAGATTGAAGAACG+GGG | + | chr4.3:5421130-5421149 | None:intergenic | 30.0% | |
| AAACATTGTTAAGTAAGTGC+CGG | - | chr4.3:5420844-5420863 | MS.gene55738:intron | 30.0% | |
| AACAATAAGTCATGTTAGAG+AGG | + | chr4.3:5419914-5419933 | None:intergenic | 30.0% | |
| AAGAACTCTACCAAAAGAAT+GGG | - | chr4.3:5421076-5421095 | MS.gene55738:intron | 30.0% | |
| AATTAATAGTGTGAGGAACA+AGG | + | chr4.3:5422700-5422719 | None:intergenic | 30.0% | |
| AGTTAACAGTATACCTTCAA+AGG | + | chr4.3:5422168-5422187 | None:intergenic | 30.0% | |
| ATTAATAGTGTGAGGAACAA+GGG | + | chr4.3:5422699-5422718 | None:intergenic | 30.0% | |
| CAAAATATTTGCTTATCCAC+TGG | + | chr4.3:5421842-5421861 | None:intergenic | 30.0% | |
| CAGCCACATATTAAAGAAAA+TGG | + | chr4.3:5421604-5421623 | None:intergenic | 30.0% | |
| CCAACATATGTATGAGATTA+TGG | + | chr4.3:5420902-5420921 | None:intergenic | 30.0% | |
| CCATAATCTCATACATATGT+TGG | - | chr4.3:5420899-5420918 | MS.gene55738:intron | 30.0% | |
| GAAAAGAAAGATTGAAGAAC+GGG | + | chr4.3:5421131-5421150 | None:intergenic | 30.0% | |
| GAAAATTGTGAGAGAAAAGT+TGG | + | chr4.3:5421301-5421320 | None:intergenic | 30.0% | |
| GAAATTCAGCAATATTGACA+GGG | + | chr4.3:5422459-5422478 | None:intergenic | 30.0% | |
| GACATTAACAAGAAAAATGG+AGG | + | chr4.3:5420582-5420601 | None:intergenic | 30.0% | |
| GAGTGAACAATCTTTGTAAA+AGG | + | chr4.3:5421035-5421054 | None:intergenic | 30.0% | |
| GCACACTATTAGTAATAATC+AGG | + | chr4.3:5422934-5422953 | None:intergenic | 30.0% | |
| GCTCAAATTAAATAGAGGAA+AGG | + | chr4.3:5421457-5421476 | None:intergenic | 30.0% | |
| GGAAAAGAAAGATTGAAGAA+CGG | + | chr4.3:5421132-5421151 | None:intergenic | 30.0% | |
| GTAAATAGACAAATACCTTG+AGG | + | chr4.3:5419721-5419740 | None:intergenic | 30.0% | |
| GTATTTATTGAGGGTAAAGT+TGG | + | chr4.3:5421277-5421296 | None:intergenic | 30.0% | |
| GTTAACAGTATACCTTCAAA+GGG | + | chr4.3:5422167-5422186 | None:intergenic | 30.0% | |
| TACTTCACTATTCAGCATTT+AGG | + | chr4.3:5420675-5420694 | None:intergenic | 30.0% | |
| TGAAATTCAGCAATATTGAC+AGG | + | chr4.3:5422460-5422479 | None:intergenic | 30.0% | |
| TGGCTATAAAAGAAACAATG+TGG | + | chr4.3:5420163-5420182 | None:intergenic | 30.0% | |
| TTATATGTGACATTTCTGCT+CGG | - | chr4.3:5420068-5420087 | MS.gene55738:intron | 30.0% | |
| TTCCCCAATAAAAATAGTGT+AGG | + | chr4.3:5420355-5420374 | None:intergenic | 30.0% | |
| TTTATCTGCAGCAATTTAGA+GGG | - | chr4.3:5421896-5421915 | MS.gene55738:CDS | 30.0% | |
| ! | AATTTTATCTGCAAACATGG+GGG | + | chr4.3:5422018-5422037 | None:intergenic | 30.0% |
| ! | CAAAAGCATGATAATAGTCA+GGG | + | chr4.3:5420788-5420807 | None:intergenic | 30.0% |
| ! | CATTTTCTTTAATATGTGGC+TGG | - | chr4.3:5421602-5421621 | MS.gene55738:intron | 30.0% |
| ! | TCAGTATCAATGTTTTCTAC+TGG | + | chr4.3:5419624-5419643 | None:intergenic | 30.0% |
| ! | TTTCAGGTAATTATAGGCAT+TGG | - | chr4.3:5421746-5421765 | MS.gene55738:intron | 30.0% |
| !! | ACTAGCTTCCAAACTTTTAA+TGG | + | chr4.3:5421501-5421520 | None:intergenic | 30.0% |
| !! | GAATTTCATTGGTGATTTTC+AGG | - | chr4.3:5422472-5422491 | MS.gene55738:intron | 30.0% |
| !! | TGAAGTTTGGCTTTATCAAT+CGG | + | chr4.3:5423258-5423277 | None:intergenic | 30.0% |
| !!! | ATATTTTGACCCCATTCTTT+TGG | + | chr4.3:5421089-5421108 | None:intergenic | 30.0% |
| !!! | CTGTTTTTTGAATGTGTATC+AGG | - | chr4.3:5423194-5423213 | MS.gene55738:intron | 30.0% |
| AAAAAGGTTGTAGTAGTTGG+AGG | - | chr4.3:5420259-5420278 | MS.gene55738:intron | 35.0% | |
| AAAACAACAGAAGGTGAACT+GGG | + | chr4.3:5419744-5419763 | None:intergenic | 35.0% | |
| AAAACCCTTGAGTAGAAGTA+TGG | + | chr4.3:5422510-5422529 | None:intergenic | 35.0% | |
| AAACGACACTCATTGTGAAA+CGG | - | chr4.3:5421369-5421388 | MS.gene55738:CDS | 35.0% | |
| AAATTGGACAGATCTACAAC+CGG | - | chr4.3:5422298-5422317 | MS.gene55738:intron | 35.0% | |
| AACATTGTTAAGTAAGTGCC+GGG | - | chr4.3:5420845-5420864 | MS.gene55738:intron | 35.0% | |
| AAGACGAAAACAATCCTTAC+CGG | + | chr4.3:5422796-5422815 | None:intergenic | 35.0% | |
| AAGTGACACTCATTGTGAAA+CGG | + | chr4.3:5421183-5421202 | None:intergenic | 35.0% | |
| AATCCACGCATCAATACTAA+AGG | + | chr4.3:5422820-5422839 | None:intergenic | 35.0% | |
| ACATTCAAAAAACAGCTCTC+AGG | + | chr4.3:5423189-5423208 | None:intergenic | 35.0% | |
| ACTACACTAGAAATTACCTC+AGG | + | chr4.3:5423005-5423024 | None:intergenic | 35.0% | |
| AGAACTCTACCAAAAGAATG+GGG | - | chr4.3:5421077-5421096 | MS.gene55738:intron | 35.0% | |
| AGAGGAAAAATGAGGCTAAA+AGG | + | chr4.3:5420811-5420830 | None:intergenic | 35.0% | |
| AGGTTTCCAGATAAAATTGG+CGG | - | chr4.3:5419811-5419830 | MS.gene55738:intron | 35.0% | |
| ATCTATTGTTGAAGCCGATA+CGG | - | chr4.3:5421565-5421584 | MS.gene55738:intron | 35.0% | |
| ATCTTCCATACTTCTACTCA+AGG | - | chr4.3:5422502-5422521 | MS.gene55738:intron | 35.0% | |
| ATTAGAGAAGAAGAGGTCAA+TGG | - | chr4.3:5421697-5421716 | MS.gene55738:intron | 35.0% | |
| CAAACTTTGACAACAAGTTC+TGG | - | chr4.3:5419648-5419667 | MS.gene55738:CDS | 35.0% | |
| CTACACTAGAAATTACCTCA+GGG | + | chr4.3:5423004-5423023 | None:intergenic | 35.0% | |
| CTTTATCTGCAGCAATTTAG+AGG | - | chr4.3:5421895-5421914 | MS.gene55738:CDS | 35.0% | |
| CTTTGTAAAAGGTGATCTTC+AGG | + | chr4.3:5421024-5421043 | None:intergenic | 35.0% | |
| GAAGAACTCTACCAAAAGAA+TGG | - | chr4.3:5421075-5421094 | MS.gene55738:intron | 35.0% | |
| GAAGGACTAAGAGAATAGAA+TGG | + | chr4.3:5421435-5421454 | None:intergenic | 35.0% | |
| GAATGGGGTCAAAATATTGA+AGG | - | chr4.3:5421092-5421111 | MS.gene55738:intron | 35.0% | |
| GTATTCTTATCCTGCATTTC+AGG | - | chr4.3:5422080-5422099 | MS.gene55738:intron | 35.0% | |
| TATCTGGTGTTCACTATGTT+CGG | - | chr4.3:5419839-5419858 | MS.gene55738:intron | 35.0% | |
| TCTGGAAAGCTTCTTAAGTA+TGG | - | chr4.3:5419666-5419685 | MS.gene55738:CDS | 35.0% | |
| TCTTCCATACTTCTACTCAA+GGG | - | chr4.3:5422503-5422522 | MS.gene55738:intron | 35.0% | |
| TGGATTATCTCTGAGCTTTA+GGG | - | chr4.3:5422834-5422853 | MS.gene55738:intron | 35.0% | |
| TTAATAGTGTGAGGAACAAG+GGG | + | chr4.3:5422698-5422717 | None:intergenic | 35.0% | |
| TTTCCAGGAAAAAGCGAAAA+AGG | - | chr4.3:5420243-5420262 | MS.gene55738:intron | 35.0% | |
| ! | AGCTTCCAAACTTTTAATGG+AGG | + | chr4.3:5421498-5421517 | None:intergenic | 35.0% |
| ! | ATTGTCAAAGTATCCATGCA+TGG | + | chr4.3:5420879-5420898 | None:intergenic | 35.0% |
| ! | ATTTTATCTGCAAACATGGG+GGG | + | chr4.3:5422017-5422036 | None:intergenic | 35.0% |
| ! | CAATTTGTTTCACTGCGTAA+AGG | - | chr4.3:5420622-5420641 | MS.gene55738:intron | 35.0% |
| ! | GCAAAAGCATGATAATAGTC+AGG | + | chr4.3:5420789-5420808 | None:intergenic | 35.0% |
| ! | TCAAGGGTTTTTGAATACGA+AGG | - | chr4.3:5422519-5422538 | MS.gene55738:intron | 35.0% |
| ! | TTGTCAAAGTATCCATGCAT+GGG | + | chr4.3:5420878-5420897 | None:intergenic | 35.0% |
| ! | TTTTTGGATTGAATCCGGTA+AGG | - | chr4.3:5422779-5422798 | MS.gene55738:intron | 35.0% |
| !! | AACAACTAATTTCAGGTTGC+AGG | + | chr4.3:5422425-5422444 | None:intergenic | 35.0% |
| !! | AGGGTTTGCTTTTGAAAGAA+TGG | + | chr4.3:5420427-5420446 | None:intergenic | 35.0% |
| !! | AGTTTGGAAGCTAGTTCTAA+TGG | - | chr4.3:5421506-5421525 | MS.gene55738:intron | 35.0% |
| !! | ATTCCTGTTTCTGGAAAACT+AGG | - | chr4.3:5422226-5422245 | MS.gene55738:intron | 35.0% |
| !! | GAAGCTAGTTCTAATGGTAA+CGG | - | chr4.3:5421512-5421531 | MS.gene55738:intron | 35.0% |
| !! | TTCACAATGAGTGTCGTTTA+AGG | + | chr4.3:5421368-5421387 | None:intergenic | 35.0% |
| !! | TTTCCTTTAGTATTGATGCG+TGG | - | chr4.3:5422814-5422833 | MS.gene55738:intron | 35.0% |
| !!! | AAAGTATGGTGGCAGTTTTT+TGG | - | chr4.3:5422552-5422571 | MS.gene55738:intron | 35.0% |
| !!! | GCTACTTTTTGGATTGAATC+CGG | - | chr4.3:5422774-5422793 | MS.gene55738:intron | 35.0% |
| !!! | TGAGGTTGCATTTTGAAGTT+TGG | + | chr4.3:5423271-5423290 | None:intergenic | 35.0% |
| AAAATTGGCGGAAACCTATC+TGG | - | chr4.3:5419823-5419842 | MS.gene55738:intron | 40.0% | |
| AAACAACAGAAGGTGAACTG+GGG | + | chr4.3:5419743-5419762 | None:intergenic | 40.0% | |
| AAGGAAGCCCTAGAAAAGTA+TGG | - | chr4.3:5422538-5422557 | MS.gene55738:intron | 40.0% | |
| AAGGGAGTTCTTGTTGAAAG+TGG | - | chr4.3:5422975-5422994 | MS.gene55738:intron | 40.0% | |
| ACTTCAAAATGCAACCTCAG+TGG | - | chr4.3:5423272-5423291 | MS.gene55738:CDS | 40.0% | |
| AGGGAGTTCTTGTTGAAAGT+GGG | - | chr4.3:5422976-5422995 | MS.gene55738:intron | 40.0% | |
| ATAGTGTGCTAATACTGCAC+AGG | - | chr4.3:5422945-5422964 | MS.gene55738:intron | 40.0% | |
| ATATTCCAGGAATGCTTGTC+CGG | + | chr4.3:5422119-5422138 | None:intergenic | 40.0% | |
| ATCTGGTGTTCACTATGTTC+GGG | - | chr4.3:5419840-5419859 | MS.gene55738:intron | 40.0% | |
| ATGATAATAGTCAGGGTCCT+TGG | + | chr4.3:5420781-5420800 | None:intergenic | 40.0% | |
| ATTAAGACACAGCTCTACCA+AGG | - | chr4.3:5420761-5420780 | MS.gene55738:intron | 40.0% | |
| ATTCCTGGAATATTTGCCGT+TGG | - | chr4.3:5422126-5422145 | MS.gene55738:intron | 40.0% | |
| CCTTTGAACAGTTGGAGAAA+CGG | - | chr4.3:5422722-5422741 | MS.gene55738:intron | 40.0% | |
| CGTCTTCATTAGAGAAGAAG+AGG | - | chr4.3:5421690-5421709 | MS.gene55738:intron | 40.0% | |
| GAAAACAACAGAAGGTGAAC+TGG | + | chr4.3:5419745-5419764 | None:intergenic | 40.0% | |
| GAACATAGTGAACACCAGAT+AGG | + | chr4.3:5419840-5419859 | None:intergenic | 40.0% | |
| GCGAAAAAGGTTGTAGTAGT+TGG | - | chr4.3:5420256-5420275 | MS.gene55738:intron | 40.0% | |
| GCGACTAGAAAGACTTAATG+TGG | + | chr4.3:5420715-5420734 | None:intergenic | 40.0% | |
| GGTTTGAATACTGATGTTGG+TGG | - | chr4.3:5421803-5421822 | MS.gene55738:intron | 40.0% | |
| GTAGTTGGAGGTGGTTATAT+AGG | - | chr4.3:5420271-5420290 | MS.gene55738:intron | 40.0% | |
| GTATACCTTCAAAGGGAAAG+CGG | + | chr4.3:5422160-5422179 | None:intergenic | 40.0% | |
| GTGGGTTTGAATACTGATGT+TGG | - | chr4.3:5421800-5421819 | MS.gene55738:intron | 40.0% | |
| GTTGGAGAAACGGTTGAAAT+TGG | - | chr4.3:5422732-5422751 | MS.gene55738:intron | 40.0% | |
| TGATCAGACATTCCTGTTTC+TGG | - | chr4.3:5422217-5422236 | MS.gene55738:intron | 40.0% | |
| TGGAGGTGGTTATATAGGAA+TGG | - | chr4.3:5420276-5420295 | MS.gene55738:intron | 40.0% | |
| TGGATCGCTTATTATCGCTA+CGG | - | chr4.3:5419686-5419705 | MS.gene55738:CDS | 40.0% | |
| ! | AACTGCCACCATACTTTTCT+AGG | + | chr4.3:5422549-5422568 | None:intergenic | 40.0% |
| ! | ACTGCCACCATACTTTTCTA+GGG | + | chr4.3:5422548-5422567 | None:intergenic | 40.0% |
| ! | AGGTTTCCGCCAATTTTATC+TGG | + | chr4.3:5419820-5419839 | None:intergenic | 40.0% |
| ! | ATACCTTGAACTCGCTGTTT+TGG | + | chr4.3:5422050-5422069 | None:intergenic | 40.0% |
| ! | GGATTATCTCTGAGCTTTAG+GGG | - | chr4.3:5422835-5422854 | MS.gene55738:intron | 40.0% |
| ! | GGGTTCTAACAAAGGAAACA+CGG | + | chr4.3:5421997-5422016 | None:intergenic | 40.0% |
| ! | GTGGATTATCTCTGAGCTTT+AGG | - | chr4.3:5422833-5422852 | MS.gene55738:intron | 40.0% |
| !! | AGTTTGGCTTTATCAATCGG+AGG | + | chr4.3:5423255-5423274 | None:intergenic | 40.0% |
| !! | TACTGATGTTGGTGGTATAC+AGG | - | chr4.3:5421811-5421830 | MS.gene55738:intron | 40.0% |
| !! | TATCCTGCATTTCAGGTTGA+TGG | - | chr4.3:5422087-5422106 | MS.gene55738:intron | 40.0% |
| !!! | CAACCTTTTTCGCTTTTTCC+TGG | + | chr4.3:5420249-5420268 | None:intergenic | 40.0% |
| !!! | TGGCAGTTTTTTGGAGACAA+TGG | - | chr4.3:5422561-5422580 | MS.gene55738:intron | 40.0% |
| AAGATTCCCGAGCAATGTCT+AGG | + | chr4.3:5423305-5423324 | None:intergenic | 45.0% | |
| AAGGTTGTAGTAGTTGGAGG+TGG | - | chr4.3:5420262-5420281 | MS.gene55738:intron | 45.0% | |
| ACGGAGGGAGTAAGTAGTAA+TGG | - | chr4.3:5421388-5421407 | MS.gene55738:CDS | 45.0% | |
| AGACCATCAACCTGAAATGC+AGG | + | chr4.3:5422093-5422112 | None:intergenic | 45.0% | |
| AGATTCCCGAGCAATGTCTA+GGG | + | chr4.3:5423304-5423323 | None:intergenic | 45.0% | |
| ATACTGCACAGGTAAGCTGA+AGG | - | chr4.3:5422956-5422975 | MS.gene55738:intron | 45.0% | |
| ATTCAAACCCACCCTCTCAA+AGG | + | chr4.3:5421792-5421811 | None:intergenic | 45.0% | |
| CATGTTCCACTCGAGAAATC+CGG | + | chr4.3:5422320-5422339 | None:intergenic | 45.0% | |
| CCGTTTCTCCAACTGTTCAA+AGG | + | chr4.3:5422725-5422744 | None:intergenic | 45.0% | |
| CGGAGGGAGTAAGTAGTAAT+GGG | - | chr4.3:5421389-5421408 | MS.gene55738:CDS | 45.0% | |
| GAAAGATTGAAGAACGGGGA+TGG | + | chr4.3:5421126-5421145 | None:intergenic | 45.0% | |
| GACACTCATTGTGAAACGGA+GGG | - | chr4.3:5421373-5421392 | MS.gene55738:CDS | 45.0% | |
| GACACTCATTGTGAAACGGA+GGG | + | chr4.3:5421392-5421373 | None:intergenic | 45.0% | |
| GAGAAGAAGAGGTCAATGGA+TGG | - | chr4.3:5421701-5421720 | MS.gene55738:intron | 45.0% | |
| GGATCGCTTATTATCGCTAC+GGG | - | chr4.3:5419687-5419706 | MS.gene55738:CDS | 45.0% | |
| GGGTGCCTCCATTAAAAGTT+TGG | - | chr4.3:5421490-5421509 | MS.gene55738:intron | 45.0% | |
| TACTGCACAGGTAAGCTGAA+GGG | - | chr4.3:5422957-5422976 | MS.gene55738:intron | 45.0% | |
| TAGCCAAAACAGCGAGTTCA+AGG | - | chr4.3:5422044-5422063 | MS.gene55738:intron | 45.0% | |
| TCAAAATGCAACCTCAGTGG+AGG | - | chr4.3:5423275-5423294 | MS.gene55738:CDS | 45.0% | |
| TCACCAACGGCAAATATTCC+AGG | + | chr4.3:5422132-5422151 | None:intergenic | 45.0% | |
| TCATATCTCCGTGCAAGAGA+AGG | + | chr4.3:5421057-5421076 | None:intergenic | 45.0% | |
| TGACACTCATTGTGAAACGG+AGG | + | chr4.3:5421180-5421199 | None:intergenic | 45.0% | |
| TGTAGATCATGCTCGCAGAT+CGG | - | chr4.3:5422338-5422357 | MS.gene55738:intron | 45.0% | |
| TGTTCACTCCTTCTCTTGCA+CGG | - | chr4.3:5421046-5421065 | MS.gene55738:intron | 45.0% | |
| TTCAAACCCACCCTCTCAAA+GGG | + | chr4.3:5421791-5421810 | None:intergenic | 45.0% | |
| ! | AACATGGGGGGTTCTAACAA+AGG | + | chr4.3:5422005-5422024 | None:intergenic | 45.0% |
| ! | GAAGCCCTAGAAAAGTATGG+TGG | - | chr4.3:5422541-5422560 | MS.gene55738:intron | 45.0% |
| !! | ATGTTGGTGGTATACAGGTG+AGG | - | chr4.3:5421816-5421835 | MS.gene55738:intron | 45.0% |
| !! | CTGCCTAGTTTTCCAGAAAC+AGG | + | chr4.3:5422232-5422251 | None:intergenic | 45.0% |
| !! | GCTAGTTCTAATGGTAACGG+AGG | - | chr4.3:5421515-5421534 | MS.gene55738:intron | 45.0% |
| !! | TTCAGGTTGATGGTCTGTTC+CGG | - | chr4.3:5422097-5422116 | MS.gene55738:intron | 45.0% |
| AAATGCAACCTCAGTGGAGG+AGG | - | chr4.3:5423278-5423297 | MS.gene55738:CDS | 50.0% | |
| AGATTGAAGAACGGGGATGG+AGG | + | chr4.3:5421123-5421142 | None:intergenic | 50.0% | |
| ATCAATCGGAGGCTGTCTTC+TGG | + | chr4.3:5423244-5423263 | None:intergenic | 50.0% | |
| CCATGCATGGGTTTAACTCC+CGG | + | chr4.3:5420866-5420885 | None:intergenic | 50.0% | |
| CGACACTCATTGTGAAACGG+AGG | - | chr4.3:5421372-5421391 | MS.gene55738:CDS | 50.0% | |
| CTACAACCGGATTTCTCGAG+TGG | - | chr4.3:5422311-5422330 | MS.gene55738:intron | 50.0% | |
| GAAAGCGGCTACATCACCAA+CGG | + | chr4.3:5422145-5422164 | None:intergenic | 50.0% | |
| GCTGCTGTGAAACTTGGAGA+TGG | - | chr4.3:5421542-5421561 | MS.gene55738:intron | 50.0% | |
| GGACCAAATCAGCAGAAGCA+TGG | + | chr4.3:5422913-5422932 | None:intergenic | 50.0% | |
| ! | GCACCATGCTTCTGCTGATT+TGG | - | chr4.3:5422907-5422926 | MS.gene55738:intron | 50.0% |
| ! | TGTAGCCGCTTTCCCTTTGA+AGG | - | chr4.3:5422152-5422171 | MS.gene55738:intron | 50.0% |
| !! | GGTGTTGCTGCTGTGAAACT+TGG | - | chr4.3:5421536-5421555 | MS.gene55738:intron | 50.0% |
| !! | TGATGCGCTGGTTTCATCGT+TGG | - | chr4.3:5419876-5419895 | MS.gene55738:intron | 50.0% |
| AGGAGGCCCTAGACATTGCT+CGG | - | chr4.3:5423295-5423314 | MS.gene55738:CDS | 55.0% | |
| ATTGGAGCGAAGCCTGCTGT+GGG | - | chr4.3:5421764-5421783 | MS.gene55738:intron | 55.0% | |
| CCGGGAGTTAAACCCATGCA+TGG | - | chr4.3:5420863-5420882 | MS.gene55738:intron | 55.0% | |
| CTACGGGATGTACAGCCTCA+AGG | - | chr4.3:5419703-5419722 | MS.gene55738:CDS | 55.0% | |
| CTGTTCCGGACAAGCATTCC+TGG | - | chr4.3:5422111-5422130 | MS.gene55738:intron | 55.0% | |
| GGCTGTCTTCTGGCAAGTTC+AGG | + | chr4.3:5423234-5423253 | None:intergenic | 55.0% | |
| GTCTTCTGGCAAGTTCAGGC+AGG | + | chr4.3:5423230-5423249 | None:intergenic | 55.0% | |
| TGGTATACAGGTGAGGCCAG+TGG | - | chr4.3:5421823-5421842 | MS.gene55738:intron | 55.0% | |
| TGTTGAAAGTGGGAGCCCTG+AGG | - | chr4.3:5422986-5423005 | MS.gene55738:intron | 55.0% | |
| TGTTGCAGATGCTGATGCGC+TGG | - | chr4.3:5419864-5419883 | MS.gene55738:intron | 55.0% | |
| TTGCTGCTGCAGCTGTTGCT+TGG | - | chr4.3:5420302-5420321 | MS.gene55738:intron | 55.0% | |
| ! | TGCTGTGGGTCCCTTTGAGA+GGG | - | chr4.3:5421778-5421797 | MS.gene55738:intron | 55.0% |
| CATTGGAGCGAAGCCTGCTG+TGG | - | chr4.3:5421763-5421782 | MS.gene55738:intron | 60.0% | |
| CTCTCAAAGGGACCCACAGC+AGG | + | chr4.3:5421779-5421798 | None:intergenic | 60.0% | |
| CTGCTGTGGGTCCCTTTGAG+AGG | - | chr4.3:5421777-5421796 | MS.gene55738:intron | 60.0% | |
| GGAGGCCCTAGACATTGCTC+GGG | - | chr4.3:5423296-5423315 | MS.gene55738:CDS | 60.0% | |
| ! | GTGGGTCCCTTTGAGAGGGT+GGG | - | chr4.3:5421782-5421801 | MS.gene55738:intron | 60.0% |
| ! | TGTGGGTCCCTTTGAGAGGG+TGG | - | chr4.3:5421781-5421800 | MS.gene55738:intron | 60.0% |
| ! | GTCTAGGGCCTCCTCCACTG+AGG | + | chr4.3:5423289-5423308 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 5419606 | 5423335 | 5419606 | ID=MS.gene55738 |
| chr4.3 | mRNA | 5419606 | 5423335 | 5419606 | ID=MS.gene55738.t1;Parent=MS.gene55738 |
| chr4.3 | exon | 5423217 | 5423335 | 5423217 | ID=MS.gene55738.t1.exon1;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5423217 | 5423335 | 5423217 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5423044 | 5423128 | 5423044 | ID=MS.gene55738.t1.exon2;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5423044 | 5423128 | 5423044 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5422602 | 5422691 | 5422602 | ID=MS.gene55738.t1.exon3;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5422602 | 5422691 | 5422602 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5421828 | 5421929 | 5421828 | ID=MS.gene55738.t1.exon4;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5421828 | 5421929 | 5421828 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5421355 | 5421450 | 5421355 | ID=MS.gene55738.t1.exon5;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5421355 | 5421450 | 5421355 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5421109 | 5421189 | 5421109 | ID=MS.gene55738.t1.exon6;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5421109 | 5421189 | 5421109 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5420768 | 5420839 | 5420768 | ID=MS.gene55738.t1.exon7;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5420768 | 5420839 | 5420768 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5420538 | 5420632 | 5420538 | ID=MS.gene55738.t1.exon8;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5420538 | 5420632 | 5420538 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5420359 | 5420447 | 5420359 | ID=MS.gene55738.t1.exon9;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5420359 | 5420447 | 5420359 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5420146 | 5420208 | 5420146 | ID=MS.gene55738.t1.exon10;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5420146 | 5420208 | 5420146 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5419934 | 5419974 | 5419934 | ID=MS.gene55738.t1.exon11;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5419934 | 5419974 | 5419934 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| chr4.3 | exon | 5419606 | 5419725 | 5419606 | ID=MS.gene55738.t1.exon12;Parent=MS.gene55738.t1 |
| chr4.3 | CDS | 5419606 | 5419725 | 5419606 | ID=cds.MS.gene55738.t1;Parent=MS.gene55738.t1 |
| Gene Sequence |
| Protein sequence |
