Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55854.t1 | XP_003630601.2 | 92.8 | 433 | 25 | 3 | 1 | 433 | 9 | 435 | 8.70E-231 | 809.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55854.t1 | B0SC03 | 28.4 | 296 | 165 | 5 | 127 | 422 | 3 | 251 | 3.8e-17 | 90.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55854.t1 | G7LIU9 | 92.8 | 433 | 25 | 3 | 1 | 433 | 9 | 435 | 6.3e-231 | 809.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052255 | MS.gene55854 | 0.801118 | 1.05E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55854.t1 | MTR_8g101250 | 93.533 | 433 | 22 | 3 | 1 | 433 | 9 | 435 | 0.0 | 815 |
| MS.gene55854.t1 | MTR_8g101250 | 91.463 | 328 | 22 | 3 | 1 | 328 | 9 | 330 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55854.t1 | AT5G35400 | 59.427 | 419 | 139 | 5 | 38 | 430 | 6 | 419 | 7.00e-162 | 462 |
| MS.gene55854.t1 | AT5G35400 | 53.191 | 470 | 138 | 7 | 38 | 430 | 6 | 470 | 3.15e-151 | 437 |
Find 94 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGGAGTTCCAGAAATTT+TGG | 0.144575 | 4.3:-3888347 | MS.gene55854:CDS |
| TCAGTATTATCCAAAATTTC+TGG | 0.163796 | 4.3:+3888337 | None:intergenic |
| TAAAAGTTACTCACAGTTAT+AGG | 0.196185 | 4.3:+3886088 | None:intergenic |
| ATTGCATCTTCAATTTCTTT+TGG | 0.271658 | 4.3:+3886958 | None:intergenic |
| ACTCACAGTTATAGGCAATT+TGG | 0.278122 | 4.3:+3886096 | None:intergenic |
| AGCGTTCCATCTAGCGTATT+TGG | 0.282194 | 4.3:+3888673 | None:intergenic |
| TGATGCCTTGTTAAAGCTTA+TGG | 0.285310 | 4.3:-3883569 | MS.gene55854:CDS |
| CCACTTCCCACTGCGATCTT+TGG | 0.311147 | 4.3:+3888294 | None:intergenic |
| CTGTGACATTGCTAGGAAAA+TGG | 0.311452 | 4.3:-3884296 | MS.gene55854:intron |
| GAAGGTTGTGCTGCTGTTGC+TGG | 0.345856 | 4.3:-3888029 | MS.gene55854:CDS |
| CTTTGAACAGTATTCAAGTT+TGG | 0.352375 | 4.3:+3888205 | None:intergenic |
| CCAAAGATCGCAGTGGGAAG+TGG | 0.368735 | 4.3:-3888294 | MS.gene55854:CDS |
| ATCCCTCCAAATACGCTAGA+TGG | 0.395430 | 4.3:-3888679 | MS.gene55854:CDS |
| AGCACCAAAGTGGCGGCAAT+GGG | 0.403358 | 4.3:-3886658 | MS.gene55854:CDS |
| CGGTGAGTGGGAAAATATAA+AGG | 0.408298 | 4.3:+3886693 | None:intergenic |
| AATTCATGTACGCAAGGCCT+TGG | 0.418528 | 4.3:-3888551 | MS.gene55854:CDS |
| TATTAGGAAGCACATGTTGA+TGG | 0.419877 | 4.3:-3888825 | None:intergenic |
| GTTGCTGGTCGAACAGATAA+AGG | 0.423976 | 4.3:-3888014 | MS.gene55854:CDS |
| CTCCATTTGGCAGAGAAGTT+CGG | 0.434689 | 4.3:+3886722 | None:intergenic |
| ATCCGAACTTCTCTGCCAAA+TGG | 0.439098 | 4.3:-3886724 | MS.gene55854:CDS |
| TCAACTAGACATAGGCCATC+AGG | 0.443873 | 4.3:+3883508 | None:intergenic |
| ACTCCCCATTGCCGCCACTT+TGG | 0.457889 | 4.3:+3886654 | None:intergenic |
| CAACGCCGTGACCGTGATGA+AGG | 0.459020 | 4.3:+3888764 | None:intergenic |
| AAGCACCAAAGTGGCGGCAA+TGG | 0.461294 | 4.3:-3886659 | MS.gene55854:CDS |
| ATAAAGGTAACGCCTCCATT+TGG | 0.471217 | 4.3:+3886709 | None:intergenic |
| GCAATAAATGACGCAGCACC+AGG | 0.471729 | 4.3:-3886940 | MS.gene55854:CDS |
| TGGTTATGCAGAATTTGAAC+GGG | 0.476034 | 4.3:-3883482 | MS.gene55854:CDS |
| ATCTAGCGTATTTGGAGGGA+TGG | 0.476956 | 4.3:+3888681 | None:intergenic |
| CGTATTTGGAGGGATGGGTA+TGG | 0.479472 | 4.3:+3888687 | None:intergenic |
| AAAATTCTTCTTTCCTATCA+CGG | 0.480718 | 4.3:-3888256 | MS.gene55854:CDS |
| GATGACTATCTCTTTCACTT+TGG | 0.481377 | 4.3:+3888723 | None:intergenic |
| TGTGATTCTGACAGCAAGGA+TGG | 0.483744 | 4.3:-3886602 | MS.gene55854:CDS |
| TTTATCCTTCATCACGGTCA+CGG | 0.488995 | 4.3:-3888769 | MS.gene55854:CDS |
| TTTCCCACTCACCGATGGAC+AGG | 0.493266 | 4.3:-3886684 | MS.gene55854:CDS |
| GGCAGAGAAGTTCGGATGAA+AGG | 0.497782 | 4.3:+3886730 | None:intergenic |
| ATCAAAAGAAGCGCCGTGAT+AGG | 0.502047 | 4.3:+3888243 | None:intergenic |
| GAGGGCTGTATCTGTATATG+AGG | 0.504365 | 4.3:-3886911 | MS.gene55854:intron |
| AATCATATGTGTTCAGCGTA+AGG | 0.506719 | 4.3:-3886562 | MS.gene55854:CDS |
| CAACTAGACATAGGCCATCA+GGG | 0.514616 | 4.3:+3883509 | None:intergenic |
| CGCAGCACCAGGAAAATTGA+GGG | 0.519656 | 4.3:-3886929 | MS.gene55854:CDS |
| TCAGCGTAAGGAAGGTGAAC+CGG | 0.519816 | 4.3:-3886550 | MS.gene55854:CDS |
| GGCCTATGTCTAGTTGATGT+TGG | 0.520883 | 4.3:-3883502 | MS.gene55854:CDS |
| GTTCATTATGCACAGACACT+TGG | 0.523107 | 4.3:-3886996 | MS.gene55854:intron |
| ATCACGGGCAAACATCTTGT+AGG | 0.529576 | 4.3:+3886496 | None:intergenic |
| GGCTGCAGCTTCTCTAATTG+TGG | 0.529621 | 4.3:+3883603 | None:intergenic |
| TGTTCACCATGCTCGAGCTA+TGG | 0.531630 | 4.3:-3886122 | MS.gene55854:CDS |
| AAAAGAACAAACTTGTTGAA+GGG | 0.533238 | 4.3:+3887983 | None:intergenic |
| ATTAGGAAGCACATGTTGAT+GGG | 0.533644 | 4.3:-3888824 | None:intergenic |
| TTGGTTATGCAGAATTTGAA+CGG | 0.537032 | 4.3:-3883483 | MS.gene55854:CDS |
| ACGCAGCACCAGGAAAATTG+AGG | 0.539419 | 4.3:-3886930 | MS.gene55854:CDS |
| AAACAAAACTCAACTGCTCA+AGG | 0.552362 | 4.3:-3888069 | MS.gene55854:CDS |
| ATGCACAGACACTTGGAAGA+AGG | 0.552624 | 4.3:-3886989 | MS.gene55854:intron |
| TTGGTGCTTATCCTGTCCAT+CGG | 0.554439 | 4.3:+3886673 | None:intergenic |
| CAAAGATCGCAGTGGGAAGT+GGG | 0.569166 | 4.3:-3888293 | MS.gene55854:CDS |
| AAATCATTGACTCGTTGCCA+AGG | 0.574577 | 4.3:+3888534 | None:intergenic |
| CAAGGCATCATCTTCAGCAC+CGG | 0.575344 | 4.3:+3883582 | None:intergenic |
| TGGCTTCCATAGCTCGAGCA+TGG | 0.584068 | 4.3:+3886116 | None:intergenic |
| GTTCCATCTAGCGTATTTGG+AGG | 0.584981 | 4.3:+3888676 | None:intergenic |
| TTTCTCTTTATCCTTCATCA+CGG | 0.588427 | 4.3:-3888775 | MS.gene55854:CDS |
| GTGATTCTGACAGCAAGGAT+GGG | 0.588694 | 4.3:-3886601 | MS.gene55854:CDS |
| GCAGATGGTTAGAGTGCTTG+TGG | 0.588706 | 4.3:-3883629 | MS.gene55854:intron |
| TATCCTGTCCATCGGTGAGT+GGG | 0.593687 | 4.3:+3886681 | None:intergenic |
| ATATGTGTTCAGCGTAAGGA+AGG | 0.595166 | 4.3:-3886558 | MS.gene55854:CDS |
| TTCCATCTAGCGTATTTGGA+GGG | 0.595576 | 4.3:+3888677 | None:intergenic |
| ACAATTAGAGAAGCTGCAGC+CGG | 0.599406 | 4.3:-3883601 | MS.gene55854:CDS |
| ACGGCGTTGTAATTATTCGA+TGG | 0.601058 | 4.3:-3888750 | MS.gene55854:CDS |
| TGAACAAAACACTCTGTTGG+TGG | 0.601474 | 4.3:+3886139 | None:intergenic |
| CGAACTTCTCTGCCAAATGG+AGG | 0.604545 | 4.3:-3886721 | MS.gene55854:CDS |
| GACAAAGGTCTGCCTATCGA+AGG | 0.604643 | 4.3:-3888047 | MS.gene55854:CDS |
| GAGGCAAAGAGAAGTTGCCA+CGG | 0.605797 | 4.3:+3888496 | None:intergenic |
| AATACTGAGTTCGAAAGTGA+TGG | 0.606706 | 4.3:-3888322 | MS.gene55854:CDS |
| TTATCCTGTCCATCGGTGAG+TGG | 0.607517 | 4.3:+3886680 | None:intergenic |
| TCTAGCGTATTTGGAGGGAT+GGG | 0.615798 | 4.3:+3888682 | None:intergenic |
| CAAACTTGAATACTGTTCAA+AGG | 0.617373 | 4.3:-3888204 | MS.gene55854:intron |
| GTGTATCCAAAGATCGCAGT+GGG | 0.622172 | 4.3:-3888300 | MS.gene55854:CDS |
| GCTTCGAATTCATGTACGCA+AGG | 0.624809 | 4.3:-3888557 | MS.gene55854:CDS |
| ACTCAACTGCTCAAGGACAA+AGG | 0.624888 | 4.3:-3888062 | MS.gene55854:CDS |
| AACTAGACATAGGCCATCAG+GGG | 0.624908 | 4.3:+3883510 | None:intergenic |
| AATACGCTAGATGGAACGCT+AGG | 0.637091 | 4.3:-3888670 | MS.gene55854:intron |
| ACAGCAGCACAACCTTCGAT+AGG | 0.641899 | 4.3:+3888035 | None:intergenic |
| AGCTTATGGATGCTACGTGT+AGG | 0.642304 | 4.3:-3883555 | MS.gene55854:CDS |
| CAGGATAAGCACCAAAGTGG+CGG | 0.647562 | 4.3:-3886665 | MS.gene55854:CDS |
| AACCAACATCAACTAGACAT+AGG | 0.649817 | 4.3:+3883500 | None:intergenic |
| AGCATTGTAGAAGTGTCACT+TGG | 0.651614 | 4.3:-3888107 | MS.gene55854:CDS |
| AGCATCCATAAGCTTTAACA+AGG | 0.652057 | 4.3:+3883564 | None:intergenic |
| AGGAAAATGGAGAAGAAACG+AGG | 0.662727 | 4.3:-3884283 | MS.gene55854:CDS |
| GGACAGGATAAGCACCAAAG+TGG | 0.670924 | 4.3:-3886668 | MS.gene55854:CDS |
| AATTTGTGATTCTGACAGCA+AGG | 0.676048 | 4.3:-3886606 | MS.gene55854:CDS |
| GTTGTTGTGTCTGAACAAGA+AGG | 0.682813 | 4.3:+3888799 | None:intergenic |
| GCACCAAAGTGGCGGCAATG+GGG | 0.683256 | 4.3:-3886657 | MS.gene55854:CDS |
| TGGTGAACAAAACACTCTGT+TGG | 0.686678 | 4.3:+3886136 | None:intergenic |
| GGTGTATCCAAAGATCGCAG+TGG | 0.708490 | 4.3:-3888301 | MS.gene55854:CDS |
| GGAAAATGGAGAAGAAACGA+GGG | 0.714555 | 4.3:-3884282 | MS.gene55854:CDS |
| ACTAGACATAGGCCATCAGG+GGG | 0.716575 | 4.3:+3883511 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+GGG | - | chr4.3:3884623-3884642 | MS.gene55854:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr4.3:3884624-3884643 | MS.gene55854:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr4.3:3884643-3884624 | None:intergenic | 0.0% |
| !! | AAAATTGTTATGGATAAATA+AGG | - | chr4.3:3885065-3885084 | MS.gene55854:intron | 15.0% |
| !! | AAATTATAGTCATATTCATT+AGG | - | chr4.3:3886616-3886635 | MS.gene55854:CDS | 15.0% |
| !! | AACAATAATAATGTGAATTA+TGG | - | chr4.3:3885502-3885521 | MS.gene55854:intron | 15.0% |
| !! | ATTTATGAATGACAAATATA+TGG | - | chr4.3:3886972-3886991 | MS.gene55854:CDS | 15.0% |
| !! | CATTTCTCAAAAAAAAAAAA+TGG | + | chr4.3:3886890-3886909 | None:intergenic | 15.0% |
| !! | TCTTAATATTAGAAAGATAA+CGG | + | chr4.3:3888376-3888395 | None:intergenic | 15.0% |
| !!! | AAACAAATGAATCATTTTAA+AGG | - | chr4.3:3888410-3888429 | MS.gene55854:intron | 15.0% |
| !!! | ATTCTTTTTCTTTATATTCA+TGG | + | chr4.3:3885441-3885460 | None:intergenic | 15.0% |
| !!! | GAATTTAGAATAACAATATT+GGG | + | chr4.3:3886269-3886288 | None:intergenic | 15.0% |
| !!! | TATATTTTATCCATTTGTAA+TGG | - | chr4.3:3888457-3888476 | MS.gene55854:intron | 15.0% |
| !!! | TCATTTTATTTTACATTACA+GGG | - | chr4.3:3883685-3883704 | MS.gene55854:intron | 15.0% |
| !!! | TGTATACTGTTTTTTTTTTT+GGG | - | chr4.3:3887077-3887096 | MS.gene55854:intron | 15.0% |
| !!! | TTCATTTTATTTTACATTAC+AGG | - | chr4.3:3883684-3883703 | MS.gene55854:intron | 15.0% |
| !! | AAATTTCTGAATCATACATT+AGG | - | chr4.3:3887339-3887358 | MS.gene55854:intron | 20.0% |
| !! | AAGACATTGATATTAAGAAT+AGG | + | chr4.3:3884324-3884343 | None:intergenic | 20.0% |
| !! | AATTGAAATGTAGTTAGTTA+GGG | + | chr4.3:3883822-3883841 | None:intergenic | 20.0% |
| !! | AGAAAAAGAATCAGAAAAAA+TGG | - | chr4.3:3885450-3885469 | MS.gene55854:intron | 20.0% |
| !! | AGAAAGAGAGAAAAAAATAA+AGG | - | chr4.3:3885098-3885117 | MS.gene55854:intron | 20.0% |
| !! | AGAAGAACAAAAAAAACTAT+GGG | + | chr4.3:3888492-3888511 | None:intergenic | 20.0% |
| !! | AGACATTGATATTAAGAATA+GGG | + | chr4.3:3884323-3884342 | None:intergenic | 20.0% |
| !! | ATAATAATGTGAATTATGGT+AGG | - | chr4.3:3885506-3885525 | MS.gene55854:intron | 20.0% |
| !! | ATATGTTATGTCTAACAATA+TGG | - | chr4.3:3884423-3884442 | MS.gene55854:intron | 20.0% |
| !! | ATATTGTTAGACATAACATA+TGG | + | chr4.3:3884424-3884443 | None:intergenic | 20.0% |
| !! | CAATGTGTATGTAAAAAAAA+AGG | + | chr4.3:3887247-3887266 | None:intergenic | 20.0% |
| !! | GAATCAAATCTTAAATTGTA+TGG | - | chr4.3:3885925-3885944 | MS.gene55854:intron | 20.0% |
| !! | TAATTGAAATGTAGTTAGTT+AGG | + | chr4.3:3883823-3883842 | None:intergenic | 20.0% |
| !! | TAGAAAGTGAATAATTAAGA+AGG | + | chr4.3:3883874-3883893 | None:intergenic | 20.0% |
| !! | TCTCAAAAAAAAAAAATGGA+GGG | + | chr4.3:3886886-3886905 | None:intergenic | 20.0% |
| !! | TTCTCAAAAAAAAAAAATGG+AGG | + | chr4.3:3886887-3886906 | None:intergenic | 20.0% |
| !!! | AACAATTTTACCATCAAATT+AGG | + | chr4.3:3885054-3885073 | None:intergenic | 20.0% |
| !!! | AAGACCTATATTTTTAGAAA+TGG | - | chr4.3:3886809-3886828 | MS.gene55854:intron | 20.0% |
| !!! | ATTTGATGGTAAAATTGTTA+TGG | - | chr4.3:3885055-3885074 | MS.gene55854:intron | 20.0% |
| !!! | CGAATTTAGAATAACAATAT+TGG | + | chr4.3:3886270-3886289 | None:intergenic | 20.0% |
| !!! | GTATACTGTTTTTTTTTTTG+GGG | - | chr4.3:3887078-3887097 | MS.gene55854:intron | 20.0% |
| !!! | GTGTATACTGTTTTTTTTTT+TGG | - | chr4.3:3887076-3887095 | MS.gene55854:intron | 20.0% |
| !!! | TATACTGTTTTTTTTTTTGG+GGG | - | chr4.3:3887079-3887098 | MS.gene55854:intron | 20.0% |
| !!! | TATGTTATTTTTTGTATGAC+AGG | - | chr4.3:3887269-3887288 | MS.gene55854:intron | 20.0% |
| !!! | TATGTTTTTTATTTCCTTAG+AGG | - | chr4.3:3888060-3888079 | MS.gene55854:CDS | 20.0% |
| !!! | TGTGACAGTTTTATATATAA+TGG | - | chr4.3:3885639-3885658 | MS.gene55854:intron | 20.0% |
| !!! | TTTTTTTTTGAGAAATGTAG+AGG | - | chr4.3:3886893-3886912 | MS.gene55854:intron | 20.0% |
| ! | AAAATTCTTCTTTCCTATCA+CGG | - | chr4.3:3884012-3884031 | MS.gene55854:intron | 25.0% |
| ! | AAGATAAGCTAGAAATAAAG+TGG | + | chr4.3:3886542-3886561 | None:intergenic | 25.0% |
| ! | AAGTGAATAATTAAGAAGGA+AGG | + | chr4.3:3883870-3883889 | None:intergenic | 25.0% |
| ! | AATTAAGAAGGAAGGATAAA+GGG | + | chr4.3:3883862-3883881 | None:intergenic | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | + | chr4.3:3884767-3884786 | None:intergenic | 25.0% |
| ! | ATTTGTTTGTGAAGATACAT+TGG | - | chr4.3:3886433-3886452 | MS.gene55854:intron | 25.0% |
| ! | CAAAAAACTCTATAAAACCA+AGG | + | chr4.3:3887917-3887936 | None:intergenic | 25.0% |
| ! | CAGAAGAACAAAAAAAACTA+TGG | + | chr4.3:3888493-3888512 | None:intergenic | 25.0% |
| ! | CATGTCGCATATTATTTAAA+AGG | + | chr4.3:3885389-3885408 | None:intergenic | 25.0% |
| ! | CTACACTGTTTAATTCATAT+TGG | - | chr4.3:3884111-3884130 | MS.gene55854:intron | 25.0% |
| ! | GCAAAGTTATAACTAAAAAG+TGG | - | chr4.3:3884793-3884812 | MS.gene55854:intron | 25.0% |
| ! | GGATATGTTTAGTGATTTAA+TGG | + | chr4.3:3886521-3886540 | None:intergenic | 25.0% |
| ! | GGTATAGTAAAATATTTCAG+AGG | + | chr4.3:3887744-3887763 | None:intergenic | 25.0% |
| ! | GTACATTTAACCTAATTTGA+TGG | - | chr4.3:3885041-3885060 | MS.gene55854:intron | 25.0% |
| ! | GTAGCAATTCATTTATAAGA+AGG | + | chr4.3:3884360-3884379 | None:intergenic | 25.0% |
| ! | TAAAAGTTACTCACAGTTAT+AGG | + | chr4.3:3886183-3886202 | None:intergenic | 25.0% |
| ! | TAATTAAGAAGGAAGGATAA+AGG | + | chr4.3:3883863-3883882 | None:intergenic | 25.0% |
| ! | TACTTGAATTTCTATCTTTG+TGG | - | chr4.3:3885827-3885846 | MS.gene55854:intron | 25.0% |
| ! | TCAGTATTATCCAAAATTTC+TGG | + | chr4.3:3883934-3883953 | None:intergenic | 25.0% |
| ! | TCATGTAACGACAAATATTA+TGG | + | chr4.3:3887647-3887666 | None:intergenic | 25.0% |
| ! | TGATATTAAGAATAGGGAAA+TGG | + | chr4.3:3884317-3884336 | None:intergenic | 25.0% |
| ! | TTACATGATTTATATGTCGT+TGG | - | chr4.3:3887659-3887678 | MS.gene55854:intron | 25.0% |
| ! | TTAGTGATTTAATGGAACTT+GGG | + | chr4.3:3886513-3886532 | None:intergenic | 25.0% |
| ! | TTATGGATAAATAAGGATTG+AGG | - | chr4.3:3885072-3885091 | MS.gene55854:intron | 25.0% |
| ! | TTCTGCTTAAATCATATGAA+AGG | + | chr4.3:3886574-3886593 | None:intergenic | 25.0% |
| ! | TTGTTTATGCGACTATTATT+TGG | - | chr4.3:3885903-3885922 | MS.gene55854:intron | 25.0% |
| ! | TTTAGTGATTTAATGGAACT+TGG | + | chr4.3:3886514-3886533 | None:intergenic | 25.0% |
| ! | TTTATACACTCAAACCATTA+TGG | - | chr4.3:3886858-3886877 | MS.gene55854:intron | 25.0% |
| ! | TTTGTTAGAAATGCTAGAAA+AGG | - | chr4.3:3887309-3887328 | MS.gene55854:intron | 25.0% |
| !! | AATAGCATAATTTGCATGTT+TGG | + | chr4.3:3887588-3887607 | None:intergenic | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | - | chr4.3:3884761-3884780 | MS.gene55854:intron | 25.0% |
| !! | ACCAAGAAATTTTCTATTGT+TGG | - | chr4.3:3887761-3887780 | MS.gene55854:intron | 25.0% |
| !! | ATACTTTCACATCATACTTT+TGG | - | chr4.3:3885862-3885881 | MS.gene55854:intron | 25.0% |
| !! | ATATGGAAGTTTGTTTATGA+TGG | - | chr4.3:3886989-3887008 | MS.gene55854:intron | 25.0% |
| !! | ATGGTACTTTTGATGAAATA+GGG | + | chr4.3:3884875-3884894 | None:intergenic | 25.0% |
| !! | ATTGCATCTTCAATTTCTTT+TGG | + | chr4.3:3885313-3885332 | None:intergenic | 25.0% |
| !! | ATTTTATCCATTTGTAATGG+AGG | - | chr4.3:3888460-3888479 | MS.gene55854:intron | 25.0% |
| !! | CCAAGAAATTTTCTATTGTT+GGG | - | chr4.3:3887762-3887781 | MS.gene55854:intron | 25.0% |
| !! | CTGAAAATACATTTTTGTCA+AGG | + | chr4.3:3887714-3887733 | None:intergenic | 25.0% |
| !! | GTCACCATTTCTAAAAATAT+AGG | + | chr4.3:3886816-3886835 | None:intergenic | 25.0% |
| !! | GTGTACAAAAATAAAAGTGT+TGG | + | chr4.3:3888145-3888164 | None:intergenic | 25.0% |
| !! | TACTTTCACATCATACTTTT+GGG | - | chr4.3:3885863-3885882 | MS.gene55854:intron | 25.0% |
| !! | TATGACTATAATTTGAAGCT+TGG | + | chr4.3:3886610-3886629 | None:intergenic | 25.0% |
| !! | TATGGAAGTTTGTTTATGAT+GGG | - | chr4.3:3886990-3887009 | MS.gene55854:intron | 25.0% |
| !! | TATGGTACTTTTGATGAAAT+AGG | + | chr4.3:3884876-3884895 | None:intergenic | 25.0% |
| !! | TCTCTATTTCTCAAAAGAAT+GGG | - | chr4.3:3886755-3886774 | MS.gene55854:intron | 25.0% |
| !!! | AAAAAGAACAAACTTGTTGA+AGG | + | chr4.3:3884289-3884308 | None:intergenic | 25.0% |
| !!! | AAAAGAACAAACTTGTTGAA+GGG | + | chr4.3:3884288-3884307 | None:intergenic | 25.0% |
| !!! | ATATTTTTAGAAATGGTGAC+AGG | - | chr4.3:3886816-3886835 | MS.gene55854:intron | 25.0% |
| !!! | TCTCTCTTTTAGAATGATAA+AGG | + | chr4.3:3888303-3888322 | None:intergenic | 25.0% |
| !!! | TTATTTTTGTACACTAACAC+TGG | - | chr4.3:3888151-3888170 | MS.gene55854:intron | 25.0% |
| !!! | TTTTATCCATTTGTAATGGA+GGG | - | chr4.3:3888461-3888480 | MS.gene55854:intron | 25.0% |
| CAAACTTGAATACTGTTCAA+AGG | - | chr4.3:3884064-3884083 | MS.gene55854:intron | 30.0% | |
| CATAGACCATCTCTAATAAT+TGG | - | chr4.3:3888554-3888573 | MS.gene55854:CDS | 30.0% | |
| CCCAACAATAGAAAATTTCT+TGG | + | chr4.3:3887765-3887784 | None:intergenic | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | + | chr4.3:3884712-3884731 | None:intergenic | 30.0% | |
| GTGCAATGTGAATTATATTG+AGG | + | chr4.3:3887050-3887069 | None:intergenic | 30.0% | |
| TAAATGGTCAAGATGTGTAA+TGG | + | chr4.3:3887506-3887525 | None:intergenic | 30.0% | |
| TCATATACAGACATAGAAGA+GGG | - | chr4.3:3884447-3884466 | MS.gene55854:intron | 30.0% | |
| TGATTTAAGCAGAACATTAC+TGG | - | chr4.3:3886580-3886599 | MS.gene55854:CDS | 30.0% | |
| TTAGACATAACATATGGTTG+TGG | + | chr4.3:3884418-3884437 | None:intergenic | 30.0% | |
| TTGGTTATGCAGAATTTGAA+CGG | - | chr4.3:3888785-3888804 | MS.gene55854:CDS | 30.0% | |
| TTTCTCTTTATCCTTCATCA+CGG | - | chr4.3:3883493-3883512 | MS.gene55854:CDS | 30.0% | |
| ! | AATCAGAAAAAATGGTTTGC+TGG | - | chr4.3:3885458-3885477 | MS.gene55854:intron | 30.0% |
| ! | ACTTTCACATCATACTTTTG+GGG | - | chr4.3:3885864-3885883 | MS.gene55854:intron | 30.0% |
| ! | ATAGTTTCTAGACAGCAAAA+CGG | - | chr4.3:3887139-3887158 | MS.gene55854:intron | 30.0% |
| ! | CAAATTATGCTATTTGTCCA+TGG | - | chr4.3:3887594-3887613 | MS.gene55854:intron | 30.0% |
| ! | CAGCTAGCATTTAAGATATA+TGG | - | chr4.3:3887400-3887419 | MS.gene55854:intron | 30.0% |
| ! | CTCTCTATTTCTCAAAAGAA+TGG | - | chr4.3:3886754-3886773 | MS.gene55854:intron | 30.0% |
| ! | CTTTGAACAGTATTCAAGTT+TGG | + | chr4.3:3884066-3884085 | None:intergenic | 30.0% |
| ! | GCTAATCAAATTTTTGCAGA+TGG | - | chr4.3:3888624-3888643 | MS.gene55854:intron | 30.0% |
| ! | TTCTTGAAGCTTTTGTATCA+CGG | + | chr4.3:3885791-3885810 | None:intergenic | 30.0% |
| !! | CATTCTTTTGAGAAATAGAG+AGG | + | chr4.3:3886756-3886775 | None:intergenic | 30.0% |
| !! | TGCTGATACTACTTTTAAGA+GGG | - | chr4.3:3886048-3886067 | MS.gene55854:intron | 30.0% |
| !! | TGTTGCTAACACTCTAAAAT+TGG | + | chr4.3:3888116-3888135 | None:intergenic | 30.0% |
| !! | TTTGTTTATGATGGGTTTCT+TGG | - | chr4.3:3886998-3887017 | MS.gene55854:intron | 30.0% |
| !!! | GTTCTTTTTTTGCACTTTGT+CGG | - | chr4.3:3885218-3885237 | MS.gene55854:intron | 30.0% |
| !!! | TTTTTTTTTGGGGGTACTTT+GGG | - | chr4.3:3887088-3887107 | MS.gene55854:intron | 30.0% |
| !!! | TTTTTTTTTTGGGGGTACTT+TGG | - | chr4.3:3887087-3887106 | MS.gene55854:intron | 30.0% |
| AAAAACAGATTCTCGTAAGC+AGG | - | chr4.3:3886406-3886425 | MS.gene55854:intron | 35.0% | |
| AAAACAGATTCTCGTAAGCA+GGG | - | chr4.3:3886407-3886426 | MS.gene55854:intron | 35.0% | |
| AAACAAAACTCAACTGCTCA+AGG | - | chr4.3:3884199-3884218 | MS.gene55854:intron | 35.0% | |
| AAAGTGGAAATCACACCTTA+AGG | - | chr4.3:3884809-3884828 | MS.gene55854:intron | 35.0% | |
| AACCAACATCAACTAGACAT+AGG | + | chr4.3:3888771-3888790 | None:intergenic | 35.0% | |
| AATACTGAGTTCGAAAGTGA+TGG | - | chr4.3:3883946-3883965 | MS.gene55854:intron | 35.0% | |
| AATCATATGTGTTCAGCGTA+AGG | - | chr4.3:3885706-3885725 | MS.gene55854:intron | 35.0% | |
| AATTCCTATTGTCACTCAGA+AGG | + | chr4.3:3887862-3887881 | None:intergenic | 35.0% | |
| AATTTGCATGTTTGGTTGGT+AGG | + | chr4.3:3887580-3887599 | None:intergenic | 35.0% | |
| AATTTGTGATTCTGACAGCA+AGG | - | chr4.3:3885662-3885681 | MS.gene55854:intron | 35.0% | |
| ACATCTTTGTTCACACAGTT+CGG | + | chr4.3:3884943-3884962 | None:intergenic | 35.0% | |
| ACCTGAGATTGAAAAAGAAG+AGG | + | chr4.3:3883794-3883813 | None:intergenic | 35.0% | |
| ACGAAACTATAGCAACTCTA+TGG | - | chr4.3:3884895-3884914 | MS.gene55854:intron | 35.0% | |
| ACTCACAGTTATAGGCAATT+TGG | + | chr4.3:3886175-3886194 | None:intergenic | 35.0% | |
| AGAGTTGCTATAGTTTCGTA+TGG | + | chr4.3:3884894-3884913 | None:intergenic | 35.0% | |
| ATTGCTAAAAGACACCTTCA+TGG | - | chr4.3:3884837-3884856 | MS.gene55854:intron | 35.0% | |
| ATTGGAGAAGCAAAAACCTT+CGG | + | chr4.3:3888098-3888117 | None:intergenic | 35.0% | |
| CAATCCATTTCAATGCAGAT+TGG | + | chr4.3:3887531-3887550 | None:intergenic | 35.0% | |
| CACATGCCAATTATTAGAGA+TGG | + | chr4.3:3888563-3888582 | None:intergenic | 35.0% | |
| CATATACAGACATAGAAGAG+GGG | - | chr4.3:3884448-3884467 | MS.gene55854:intron | 35.0% | |
| CTCATATACAGACATAGAAG+AGG | - | chr4.3:3884446-3884465 | MS.gene55854:intron | 35.0% | |
| GATAGAATCTTCATCTCGTT+TGG | + | chr4.3:3887474-3887493 | None:intergenic | 35.0% | |
| GATGACTATCTCTTTCACTT+TGG | + | chr4.3:3883548-3883567 | None:intergenic | 35.0% | |
| GCATAATGAACCCTAGATTA+GGG | + | chr4.3:3885263-3885282 | None:intergenic | 35.0% | |
| GCTTATCATCAGAATAGAGA+GGG | - | chr4.3:3886668-3886687 | MS.gene55854:CDS | 35.0% | |
| GGGCAACAAAAAAGAGATAA+AGG | + | chr4.3:3886249-3886268 | None:intergenic | 35.0% | |
| GTAGACAAAACAGAATCCAT+AGG | + | chr4.3:3886486-3886505 | None:intergenic | 35.0% | |
| GTCCAAGTAAACACTGAATA+GGG | - | chr4.3:3886698-3886717 | MS.gene55854:CDS | 35.0% | |
| TAAAAGTAGTATCAGCACCA+AGG | + | chr4.3:3886045-3886064 | None:intergenic | 35.0% | |
| TAAACGACTAAACTCAGTGA+AGG | + | chr4.3:3886081-3886100 | None:intergenic | 35.0% | |
| TAGAAATGCTAGAAAAGGAC+TGG | - | chr4.3:3887314-3887333 | MS.gene55854:intron | 35.0% | |
| TAGTCCAATCTGCATTGAAA+TGG | - | chr4.3:3887524-3887543 | MS.gene55854:intron | 35.0% | |
| TCAATGCAGATTGGACTAAA+TGG | + | chr4.3:3887522-3887541 | None:intergenic | 35.0% | |
| TCCAAGTAAACACTGAATAG+GGG | - | chr4.3:3886699-3886718 | MS.gene55854:CDS | 35.0% | |
| TCTGTTAATATCGAAGTCCA+TGG | + | chr4.3:3887614-3887633 | None:intergenic | 35.0% | |
| TGCATAATGAACCCTAGATT+AGG | + | chr4.3:3885264-3885283 | None:intergenic | 35.0% | |
| TGCTTATCATCAGAATAGAG+AGG | - | chr4.3:3886667-3886686 | MS.gene55854:CDS | 35.0% | |
| TGGTTATGCAGAATTTGAAC+GGG | - | chr4.3:3888786-3888805 | MS.gene55854:CDS | 35.0% | |
| TGTCCAAGTAAACACTGAAT+AGG | - | chr4.3:3886697-3886716 | MS.gene55854:CDS | 35.0% | |
| TTACTGTCATTCTGTTTCAG+TGG | - | chr4.3:3886105-3886124 | MS.gene55854:CDS | 35.0% | |
| TTGCTAAAAGACACCTTCAT+GGG | - | chr4.3:3884838-3884857 | MS.gene55854:intron | 35.0% | |
| ! | AATGATGATGATGATGAGGA+TGG | + | chr4.3:3883903-3883922 | None:intergenic | 35.0% |
| ! | AGCATCCATAAGCTTTAACA+AGG | + | chr4.3:3888707-3888726 | None:intergenic | 35.0% |
| ! | ATGATGATGATGATGAGGAT+GGG | + | chr4.3:3883902-3883921 | None:intergenic | 35.0% |
| ! | CTTCCAATTTTTGCAAAAGC+CGG | + | chr4.3:3885740-3885759 | None:intergenic | 35.0% |
| ! | GCATAATTTGCATGTTTGGT+TGG | + | chr4.3:3887584-3887603 | None:intergenic | 35.0% |
| ! | TAGATCTCACCGTTTTATGT+GGG | + | chr4.3:3888215-3888234 | None:intergenic | 35.0% |
| ! | TCTTGAAGCTTTTGTATCAC+GGG | + | chr4.3:3885790-3885809 | None:intergenic | 35.0% |
| ! | TGATGCCTTGTTAAAGCTTA+TGG | - | chr4.3:3888699-3888718 | MS.gene55854:CDS | 35.0% |
| ! | TTTTAGCAATCCACACCTTA+AGG | + | chr4.3:3884827-3884846 | None:intergenic | 35.0% |
| !! | GCTGATACTACTTTTAAGAG+GGG | - | chr4.3:3886049-3886068 | MS.gene55854:intron | 35.0% |
| !! | GTGCTGATACTACTTTTAAG+AGG | - | chr4.3:3886047-3886066 | MS.gene55854:intron | 35.0% |
| !! | TTTATGTTTTGCTGTGCTTG+TGG | - | chr4.3:3886314-3886333 | MS.gene55854:intron | 35.0% |
| !!! | TTCTGGAGTTCCAGAAATTT+TGG | - | chr4.3:3883921-3883940 | MS.gene55854:intron | 35.0% |
| AAAAATGGAGGGCTCCATAA+TGG | + | chr4.3:3886875-3886894 | None:intergenic | 40.0% | |
| AATGAACCCTAGATTAGGGA+CGG | + | chr4.3:3885259-3885278 | None:intergenic | 40.0% | |
| ACGGCGTTGTAATTATTCGA+TGG | - | chr4.3:3883518-3883537 | MS.gene55854:CDS | 40.0% | |
| AGAACAGGTCCCACATAAAA+CGG | - | chr4.3:3888203-3888222 | MS.gene55854:intron | 40.0% | |
| AGGAAAATGGAGAAGAAACG+AGG | - | chr4.3:3887985-3888004 | MS.gene55854:CDS | 40.0% | |
| AGTAAACACTGAATAGGGGA+AGG | - | chr4.3:3886703-3886722 | MS.gene55854:CDS | 40.0% | |
| ATAAAGGTAACGCCTCCATT+TGG | + | chr4.3:3885562-3885581 | None:intergenic | 40.0% | |
| ATATGTGTTCAGCGTAAGGA+AGG | - | chr4.3:3885710-3885729 | MS.gene55854:intron | 40.0% | |
| ATTTCACCTGTGACATTGCT+AGG | - | chr4.3:3887965-3887984 | MS.gene55854:intron | 40.0% | |
| CCTCATCATCATCATCATTC+TGG | - | chr4.3:3883904-3883923 | MS.gene55854:intron | 40.0% | |
| CGGTGAGTGGGAAAATATAA+AGG | + | chr4.3:3885578-3885597 | None:intergenic | 40.0% | |
| CTAGACAGCAAAACGGAAAA+AGG | - | chr4.3:3887146-3887165 | MS.gene55854:intron | 40.0% | |
| CTGTGACATTGCTAGGAAAA+TGG | - | chr4.3:3887972-3887991 | MS.gene55854:intron | 40.0% | |
| GCAAAAACCTTCGGAGAATA+TGG | + | chr4.3:3888089-3888108 | None:intergenic | 40.0% | |
| GCATAACCCTCCATTACAAA+TGG | + | chr4.3:3888470-3888489 | None:intergenic | 40.0% | |
| GGAAAATGGAGAAGAAACGA+GGG | - | chr4.3:3887986-3888005 | MS.gene55854:CDS | 40.0% | |
| GGAGAATATGGTTTCCTCTA+AGG | + | chr4.3:3888077-3888096 | None:intergenic | 40.0% | |
| GTCTGTGCATTCTTCAGAAA+AGG | + | chr4.3:3886926-3886945 | None:intergenic | 40.0% | |
| GTTCATTATGCACAGACACT+TGG | - | chr4.3:3885272-3885291 | MS.gene55854:intron | 40.0% | |
| GTTGTTGTGTCTGAACAAGA+AGG | + | chr4.3:3883472-3883491 | None:intergenic | 40.0% | |
| TACGCCAGAAACTTTAGTGA+TGG | + | chr4.3:3886787-3886806 | None:intergenic | 40.0% | |
| TAGCAATGTCACAGGTGAAA+TGG | + | chr4.3:3887966-3887985 | None:intergenic | 40.0% | |
| TATGACTAACCAACTGACAG+AGG | - | chr4.3:3885183-3885202 | MS.gene55854:intron | 40.0% | |
| TCAGCACCAAGGAAATATGA+AGG | + | chr4.3:3886034-3886053 | None:intergenic | 40.0% | |
| TCCCCTATTCAGTGTTTACT+TGG | + | chr4.3:3886703-3886722 | None:intergenic | 40.0% | |
| TGAACAAAACACTCTGTTGG+TGG | + | chr4.3:3886132-3886151 | None:intergenic | 40.0% | |
| TGACAGGTGTTTCGTATTAC+TGG | - | chr4.3:3886832-3886851 | MS.gene55854:intron | 40.0% | |
| TGCTCCATCACTAAAGTTTC+TGG | - | chr4.3:3886780-3886799 | MS.gene55854:intron | 40.0% | |
| TGGTGAACAAAACACTCTGT+TGG | + | chr4.3:3886135-3886154 | None:intergenic | 40.0% | |
| TTCCATCTAGCGTATTTGGA+GGG | + | chr4.3:3883594-3883613 | None:intergenic | 40.0% | |
| TTGTCCTTCTGAGTGACAAT+AGG | - | chr4.3:3887855-3887874 | MS.gene55854:intron | 40.0% | |
| TTGTGGAATGCAGAGACATA+TGG | + | chr4.3:3884401-3884420 | None:intergenic | 40.0% | |
| TTTATCCTTCATCACGGTCA+CGG | - | chr4.3:3883499-3883518 | MS.gene55854:CDS | 40.0% | |
| ! | CATTTTCCTAGCAATGTCAC+AGG | + | chr4.3:3887974-3887993 | None:intergenic | 40.0% |
| ! | CCAGAATGATGATGATGATG+AGG | + | chr4.3:3883907-3883926 | None:intergenic | 40.0% |
| ! | CGAGAAGACACCTTTTATGA+AGG | - | chr4.3:3884699-3884718 | MS.gene55854:intron | 40.0% |
| ! | CGGCTTTTGCAAAAATTGGA+AGG | - | chr4.3:3885738-3885757 | MS.gene55854:intron | 40.0% |
| ! | GTAGATCTCACCGTTTTATG+TGG | + | chr4.3:3888216-3888235 | None:intergenic | 40.0% |
| ! | TATATTTTCCCACTCACCGA+TGG | - | chr4.3:3885579-3885598 | MS.gene55854:intron | 40.0% |
| ! | TTTTACTTGAACACTGTCCG+TGG | - | chr4.3:3883755-3883774 | MS.gene55854:intron | 40.0% |
| !! | AAATCATTGACTCGTTGCCA+AGG | + | chr4.3:3883737-3883756 | None:intergenic | 40.0% |
| !! | AGCATTGTAGAAGTGTCACT+TGG | - | chr4.3:3884161-3884180 | MS.gene55854:intron | 40.0% |
| !! | GAACCGGCTTTTGCAAAAAT+TGG | - | chr4.3:3885734-3885753 | MS.gene55854:intron | 40.0% |
| !! | TGCTTGTTTTCATCCTAGCA+CGG | - | chr4.3:3887370-3887389 | MS.gene55854:intron | 40.0% |
| !! | TGTTTGGTTGGTAGGCTAAT+TGG | + | chr4.3:3887572-3887591 | None:intergenic | 40.0% |
| !! | TTATGATGGGTTTCTTGGAC+CGG | - | chr4.3:3887003-3887022 | MS.gene55854:intron | 40.0% |
| !! | TTCACATATTGACTCGACTG+AGG | - | chr4.3:3888602-3888621 | MS.gene55854:intron | 40.0% |
| !! | TTTTTGTTTGACAGCACTCG+AGG | - | chr4.3:3885995-3886014 | MS.gene55854:intron | 40.0% |
| !!! | GCCTCTTCTTTTTCAATCTC+AGG | - | chr4.3:3883790-3883809 | MS.gene55854:intron | 40.0% |
| !!! | TGCTAATCGCTTTTTACGCA+AGG | - | chr4.3:3888028-3888047 | MS.gene55854:CDS | 40.0% |
| AACACTGAATAGGGGAAGGA+AGG | - | chr4.3:3886707-3886726 | MS.gene55854:CDS | 45.0% | |
| AACCTTCCGTCCCTAATCTA+GGG | - | chr4.3:3885250-3885269 | MS.gene55854:intron | 45.0% | |
| AACTAGACATAGGCCATCAG+GGG | + | chr4.3:3888761-3888780 | None:intergenic | 45.0% | |
| AATACGCTAGATGGAACGCT+AGG | - | chr4.3:3883598-3883617 | MS.gene55854:CDS | 45.0% | |
| AATTCATGTACGCAAGGCCT+TGG | - | chr4.3:3883717-3883736 | MS.gene55854:intron | 45.0% | |
| ACAATTAGAGAAGCTGCAGC+CGG | - | chr4.3:3888667-3888686 | MS.gene55854:intron | 45.0% | |
| ACACTGAATAGGGGAAGGAA+GGG | - | chr4.3:3886708-3886727 | MS.gene55854:CDS | 45.0% | |
| ACAGACATAGAAGAGGGGTA+AGG | - | chr4.3:3884453-3884472 | MS.gene55854:intron | 45.0% | |
| ACAGCACTCGAGGAATAGAT+GGG | - | chr4.3:3886005-3886024 | MS.gene55854:intron | 45.0% | |
| ACTCAACTGCTCAAGGACAA+AGG | - | chr4.3:3884206-3884225 | MS.gene55854:intron | 45.0% | |
| AGACATAGAAGAGGGGTAAG+GGG | - | chr4.3:3884455-3884474 | MS.gene55854:intron | 45.0% | |
| AGCGTTCCATCTAGCGTATT+TGG | + | chr4.3:3883598-3883617 | None:intergenic | 45.0% | |
| AGCTTATGGATGCTACGTGT+AGG | - | chr4.3:3888713-3888732 | MS.gene55854:CDS | 45.0% | |
| ATCACGGGCAAACATCTTGT+AGG | + | chr4.3:3885775-3885794 | None:intergenic | 45.0% | |
| ATCCCTCCAAATACGCTAGA+TGG | - | chr4.3:3883589-3883608 | MS.gene55854:CDS | 45.0% | |
| ATCCGAACTTCTCTGCCAAA+TGG | - | chr4.3:3885544-3885563 | MS.gene55854:intron | 45.0% | |
| ATCTAGCGTATTTGGAGGGA+TGG | + | chr4.3:3883590-3883609 | None:intergenic | 45.0% | |
| ATGCACAGACACTTGGAAGA+AGG | - | chr4.3:3885279-3885298 | MS.gene55854:intron | 45.0% | |
| ATGCTTTAACTCAGACGCCT+TGG | - | chr4.3:3887897-3887916 | MS.gene55854:intron | 45.0% | |
| CAACTAGACATAGGCCATCA+GGG | + | chr4.3:3888762-3888781 | None:intergenic | 45.0% | |
| CAGACATAGAAGAGGGGTAA+GGG | - | chr4.3:3884454-3884473 | MS.gene55854:intron | 45.0% | |
| CCTGATTGTGCAAATGCCAT+GGG | - | chr4.3:3888517-3888536 | MS.gene55854:CDS | 45.0% | |
| CTCCATTTGGCAGAGAAGTT+CGG | + | chr4.3:3885549-3885568 | None:intergenic | 45.0% | |
| CTGTCTATACCTCTGTCAGT+TGG | + | chr4.3:3885195-3885214 | None:intergenic | 45.0% | |
| GAAGGAAGGGCAATTTCTGA+AGG | - | chr4.3:3886721-3886740 | MS.gene55854:CDS | 45.0% | |
| GAGGAAACCATATTCTCCGA+AGG | - | chr4.3:3888079-3888098 | MS.gene55854:CDS | 45.0% | |
| GAGGGCTGTATCTGTATATG+AGG | - | chr4.3:3885357-3885376 | MS.gene55854:intron | 45.0% | |
| GCACCAAGGAAATATGAAGG+TGG | + | chr4.3:3886031-3886050 | None:intergenic | 45.0% | |
| GCTCTCTACTCTAAGCTTCT+AGG | - | chr4.3:3886375-3886394 | MS.gene55854:intron | 45.0% | |
| GCTTCGAATTCATGTACGCA+AGG | - | chr4.3:3883711-3883730 | MS.gene55854:intron | 45.0% | |
| GGAAATCACACCTTAAGGTG+TGG | - | chr4.3:3884814-3884833 | MS.gene55854:intron | 45.0% | |
| GGACCTGTTCTCAAAATGGT+GGG | + | chr4.3:3888194-3888213 | None:intergenic | 45.0% | |
| GTGATTCTGACAGCAAGGAT+GGG | - | chr4.3:3885667-3885686 | MS.gene55854:intron | 45.0% | |
| GTGTATCCAAAGATCGCAGT+GGG | - | chr4.3:3883968-3883987 | MS.gene55854:intron | 45.0% | |
| GTTCCATCTAGCGTATTTGG+AGG | + | chr4.3:3883595-3883614 | None:intergenic | 45.0% | |
| GTTGCTGGTCGAACAGATAA+AGG | - | chr4.3:3884254-3884273 | MS.gene55854:CDS | 45.0% | |
| TAGCAACTCTATGGTCGTAG+AGG | - | chr4.3:3884904-3884923 | MS.gene55854:intron | 45.0% | |
| TCAACTAGACATAGGCCATC+AGG | + | chr4.3:3888763-3888782 | None:intergenic | 45.0% | |
| TCCTGATTGTGCAAATGCCA+TGG | - | chr4.3:3888516-3888535 | MS.gene55854:CDS | 45.0% | |
| TCTAGCGTATTTGGAGGGAT+GGG | + | chr4.3:3883589-3883608 | None:intergenic | 45.0% | |
| TGTGATTCTGACAGCAAGGA+TGG | - | chr4.3:3885666-3885685 | MS.gene55854:intron | 45.0% | |
| TGTGGGACCTGTTCTCAAAA+TGG | + | chr4.3:3888198-3888217 | None:intergenic | 45.0% | |
| TGTTAGGCCCAATTGTCGTT+GGG | - | chr4.3:3884533-3884552 | MS.gene55854:intron | 45.0% | |
| ! | ACTGACAGAGGTATAGACAG+TGG | - | chr4.3:3885195-3885214 | MS.gene55854:intron | 45.0% |
| ! | CATTGGTTGATCCAGAGACA+TGG | - | chr4.3:3886450-3886469 | MS.gene55854:intron | 45.0% |
| ! | CTGACAGAGGTATAGACAGT+GGG | - | chr4.3:3885196-3885215 | MS.gene55854:intron | 45.0% |
| ! | GATACAGCCCTCAATTTTCC+TGG | + | chr4.3:3885349-3885368 | None:intergenic | 45.0% |
| ! | GGCCTATGTCTAGTTGATGT+TGG | - | chr4.3:3888766-3888785 | MS.gene55854:CDS | 45.0% |
| ! | GGGCAATTTCTGAAGGAGTA+AGG | - | chr4.3:3886728-3886747 | MS.gene55854:CDS | 45.0% |
| ! | GGTTTTGCTAGAACCCATGA+AGG | + | chr4.3:3884854-3884873 | None:intergenic | 45.0% |
| ! | TATCACGGCGCTTCTTTTGA+TGG | - | chr4.3:3884027-3884046 | MS.gene55854:intron | 45.0% |
| ! | TCGTGGGTATTGTCGTAATC+TGG | - | chr4.3:3884597-3884616 | MS.gene55854:intron | 45.0% |
| ! | TTGGTGCTTATCCTGTCCAT+CGG | + | chr4.3:3885598-3885617 | None:intergenic | 45.0% |
| !! | ATCAAAAGAAGCGCCGTGAT+AGG | + | chr4.3:3884028-3884047 | None:intergenic | 45.0% |
| !! | CTTGTTTTCATCCTAGCACG+GGG | - | chr4.3:3887372-3887391 | MS.gene55854:intron | 45.0% |
| !! | GCTTGTTTTCATCCTAGCAC+GGG | - | chr4.3:3887371-3887390 | MS.gene55854:intron | 45.0% |
| !! | TGTCCCACCATTTTGAGAAC+AGG | - | chr4.3:3888188-3888207 | MS.gene55854:intron | 45.0% |
| !! | TAATAAATAAAAAAATATAC+TGG | + | chr4.3:3887822-3887841 | None:intergenic | 5.0% |
| AACCCTAGATTAGGGACGGA+AGG | + | chr4.3:3885255-3885274 | None:intergenic | 50.0% | |
| ACAGCAGCACAACCTTCGAT+AGG | + | chr4.3:3884236-3884255 | None:intergenic | 50.0% | |
| ACGCAGCACCAGGAAAATTG+AGG | - | chr4.3:3885338-3885357 | MS.gene55854:intron | 50.0% | |
| ACTAGACATAGGCCATCAGG+GGG | + | chr4.3:3888760-3888779 | None:intergenic | 50.0% | |
| AGGCTGCGACTAATGTCAAG+TGG | + | chr4.3:3887227-3887246 | None:intergenic | 50.0% | |
| CAAAGATCGCAGTGGGAAGT+GGG | - | chr4.3:3883975-3883994 | MS.gene55854:intron | 50.0% | |
| CAGAATCCATAGGCCAGTAG+TGG | + | chr4.3:3886476-3886495 | None:intergenic | 50.0% | |
| CAGGATAAGCACCAAAGTGG+CGG | - | chr4.3:3885603-3885622 | MS.gene55854:intron | 50.0% | |
| CCCATGGCATTTGCACAATC+AGG | + | chr4.3:3888520-3888539 | None:intergenic | 50.0% | |
| CGAACTTCTCTGCCAAATGG+AGG | - | chr4.3:3885547-3885566 | MS.gene55854:intron | 50.0% | |
| CGCAGCACCAGGAAAATTGA+GGG | - | chr4.3:3885339-3885358 | MS.gene55854:intron | 50.0% | |
| CGTATTTGGAGGGATGGGTA+TGG | + | chr4.3:3883584-3883603 | None:intergenic | 50.0% | |
| GAACCTTCCGTCCCTAATCT+AGG | - | chr4.3:3885249-3885268 | MS.gene55854:intron | 50.0% | |
| GACAAAGGTCTGCCTATCGA+AGG | - | chr4.3:3884221-3884240 | MS.gene55854:intron | 50.0% | |
| GACAGCACTCGAGGAATAGA+TGG | - | chr4.3:3886004-3886023 | MS.gene55854:intron | 50.0% | |
| GAGGCAAAGAGAAGTTGCCA+CGG | + | chr4.3:3883775-3883794 | None:intergenic | 50.0% | |
| GCAATAAATGACGCAGCACC+AGG | - | chr4.3:3885328-3885347 | MS.gene55854:intron | 50.0% | |
| GGACAGGATAAGCACCAAAG+TGG | - | chr4.3:3885600-3885619 | MS.gene55854:intron | 50.0% | |
| GGCAGAGAAGTTCGGATGAA+AGG | + | chr4.3:3885541-3885560 | None:intergenic | 50.0% | |
| GGCTGCAGCTTCTCTAATTG+TGG | + | chr4.3:3888668-3888687 | None:intergenic | 50.0% | |
| GGGACCTGTTCTCAAAATGG+TGG | + | chr4.3:3888195-3888214 | None:intergenic | 50.0% | |
| GGGCCACCTTCATATTTCCT+TGG | - | chr4.3:3886025-3886044 | MS.gene55854:intron | 50.0% | |
| GGTGTATCCAAAGATCGCAG+TGG | - | chr4.3:3883967-3883986 | MS.gene55854:intron | 50.0% | |
| GTGTTAGGCCCAATTGTCGT+TGG | - | chr4.3:3884532-3884551 | MS.gene55854:intron | 50.0% | |
| GTTAGGCCCAATTGTCGTTG+GGG | - | chr4.3:3884534-3884553 | MS.gene55854:intron | 50.0% | |
| TATCCTGTCCATCGGTGAGT+GGG | + | chr4.3:3885590-3885609 | None:intergenic | 50.0% | |
| TCAGCGTAAGGAAGGTGAAC+CGG | - | chr4.3:3885718-3885737 | MS.gene55854:intron | 50.0% | |
| TGTTCACCATGCTCGAGCTA+TGG | - | chr4.3:3886146-3886165 | MS.gene55854:CDS | 50.0% | |
| TTAGGCCCAATTGTCGTTGG+GGG | - | chr4.3:3884535-3884554 | MS.gene55854:intron | 50.0% | |
| TTATCCTGTCCATCGGTGAG+TGG | + | chr4.3:3885591-3885610 | None:intergenic | 50.0% | |
| ! | CAAGGCATCATCTTCAGCAC+CGG | + | chr4.3:3888689-3888708 | None:intergenic | 50.0% |
| ! | GCAGATGGTTAGAGTGCTTG+TGG | - | chr4.3:3888639-3888658 | MS.gene55854:intron | 50.0% |
| !! | TGGATGTGACTTGCTCCAAC+TGG | - | chr4.3:3886334-3886353 | MS.gene55854:intron | 50.0% |
| AAGCACCAAAGTGGCGGCAA+TGG | - | chr4.3:3885609-3885628 | MS.gene55854:intron | 55.0% | |
| AATTGTCGTTGGGGGAGACG+GGG | - | chr4.3:3884543-3884562 | MS.gene55854:intron | 55.0% | |
| AGCACCAAAGTGGCGGCAAT+GGG | - | chr4.3:3885610-3885629 | MS.gene55854:intron | 55.0% | |
| ATACCCACGAACCATGACCG+CGG | + | chr4.3:3884587-3884606 | None:intergenic | 55.0% | |
| CAATTGTCGTTGGGGGAGAC+GGG | - | chr4.3:3884542-3884561 | MS.gene55854:intron | 55.0% | |
| CATAGAAGAGGGGTAAGGGG+CGG | - | chr4.3:3884458-3884477 | MS.gene55854:intron | 55.0% | |
| CCAAAGATCGCAGTGGGAAG+TGG | - | chr4.3:3883974-3883993 | MS.gene55854:intron | 55.0% | |
| CCAATTGTCGTTGGGGGAGA+CGG | - | chr4.3:3884541-3884560 | MS.gene55854:intron | 55.0% | |
| CCACTTCCCACTGCGATCTT+TGG | + | chr4.3:3883977-3883996 | None:intergenic | 55.0% | |
| CGTCTCCCCCAACGACAATT+GGG | + | chr4.3:3884543-3884562 | None:intergenic | 55.0% | |
| TAGCTGAAGAACCCCGTGCT+AGG | + | chr4.3:3887386-3887405 | None:intergenic | 55.0% | |
| TCCAGAGACATGGCCACTAC+TGG | - | chr4.3:3886460-3886479 | MS.gene55854:intron | 55.0% | |
| TGGCTTCCATAGCTCGAGCA+TGG | + | chr4.3:3886155-3886174 | None:intergenic | 55.0% | |
| TGGGCCTAACACACGCGTTT+GGG | + | chr4.3:3884524-3884543 | None:intergenic | 55.0% | |
| TTGGCCCAAACGCGTGTGTT+AGG | - | chr4.3:3884517-3884536 | MS.gene55854:intron | 55.0% | |
| TTGGGCCTAACACACGCGTT+TGG | + | chr4.3:3884525-3884544 | None:intergenic | 55.0% | |
| TTTCCCACTCACCGATGGAC+AGG | - | chr4.3:3885584-3885603 | MS.gene55854:intron | 55.0% | |
| ! | ACATGGCCACTACTGGCCTA+TGG | - | chr4.3:3886467-3886486 | MS.gene55854:intron | 55.0% |
| ! | GAAGGTTGTGCTGCTGTTGC+TGG | - | chr4.3:3884239-3884258 | MS.gene55854:intron | 55.0% |
| !! | ACGGCGCTTCTTTTGATGGC+TGG | - | chr4.3:3884031-3884050 | MS.gene55854:intron | 55.0% |
| !! | TGATGGGTTTCTTGGACCGG+TGG | - | chr4.3:3887006-3887025 | MS.gene55854:intron | 55.0% |
| AATGCCATGGGCGTGCAGTC+TGG | - | chr4.3:3888529-3888548 | MS.gene55854:CDS | 60.0% | |
| ACGCGTTTGGGCCAAACCCA+AGG | + | chr4.3:3884512-3884531 | None:intergenic | 60.0% | |
| ACTCCCCATTGCCGCCACTT+TGG | + | chr4.3:3885617-3885636 | None:intergenic | 60.0% | |
| AGCGTGCACACTCTGCCAGT+TGG | + | chr4.3:3886352-3886371 | None:intergenic | 60.0% | |
| ATTGTCGTTGGGGGAGACGG+GGG | - | chr4.3:3884544-3884563 | MS.gene55854:intron | 60.0% | |
| CAACGCCGTGACCGTGATGA+AGG | + | chr4.3:3883507-3883526 | None:intergenic | 60.0% | |
| CCGTCTCCCCCAACGACAAT+TGG | + | chr4.3:3884544-3884563 | None:intergenic | 60.0% | |
| CGCGTTTGGGCCAAACCCAA+GGG | + | chr4.3:3884511-3884530 | None:intergenic | 60.0% | |
| GATGACCCAGCTCAAGCCAC+CGG | + | chr4.3:3887025-3887044 | None:intergenic | 60.0% | |
| GCACCAAAGTGGCGGCAATG+GGG | - | chr4.3:3885611-3885630 | MS.gene55854:intron | 60.0% | |
| GCCAGTAGTGGCCATGTCTC+TGG | + | chr4.3:3886464-3886483 | None:intergenic | 60.0% | |
| TGTACCAGACTGCACGCCCA+TGG | + | chr4.3:3888536-3888555 | None:intergenic | 60.0% | |
| TTGGACCGGTGGCTTGAGCT+GGG | - | chr4.3:3887017-3887036 | MS.gene55854:intron | 60.0% | |
| TTGGGCCAAACCCAAGGGCA+GGG | + | chr4.3:3884506-3884525 | None:intergenic | 60.0% | |
| TTTGGGCCAAACCCAAGGGC+AGG | + | chr4.3:3884507-3884526 | None:intergenic | 60.0% | |
| ! | GAACCATGACCGCGGTGCTA+TGG | + | chr4.3:3884579-3884598 | None:intergenic | 60.0% |
| AAACCCAAGGGCAGGGGTGG+AGG | + | chr4.3:3884499-3884518 | None:intergenic | 65.0% | |
| AACCCAAGGGCAGGGGTGGA+GGG | + | chr4.3:3884498-3884517 | None:intergenic | 65.0% | |
| AGCACCGCGGTCATGGTTCG+TGG | - | chr4.3:3884580-3884599 | MS.gene55854:intron | 65.0% | |
| CTTGGACCGGTGGCTTGAGC+TGG | - | chr4.3:3887016-3887035 | MS.gene55854:intron | 65.0% | |
| GCACCGCGGTCATGGTTCGT+GGG | - | chr4.3:3884581-3884600 | MS.gene55854:intron | 65.0% | |
| GGACCATAGCACCGCGGTCA+TGG | - | chr4.3:3884573-3884592 | MS.gene55854:intron | 65.0% | |
| TCCACCCCTGCCCTTGGGTT+TGG | - | chr4.3:3884498-3884517 | MS.gene55854:intron | 65.0% | |
| TGGGCCAAACCCAAGGGCAG+GGG | + | chr4.3:3884505-3884524 | None:intergenic | 65.0% | |
| ! | CATAGGCCATCAGGGGGTGC+TGG | + | chr4.3:3888754-3888773 | None:intergenic | 65.0% |
| CTCCCTCCACCCCTGCCCTT+GGG | - | chr4.3:3884493-3884512 | MS.gene55854:intron | 70.0% | |
| GCCAAACCCAAGGGCAGGGG+TGG | + | chr4.3:3884502-3884521 | None:intergenic | 70.0% | |
| GCTCCTCCAGCACCCCCTGA+TGG | - | chr4.3:3888745-3888764 | MS.gene55854:CDS | 70.0% | |
| TGCGGGGGACCATAGCACCG+CGG | - | chr4.3:3884567-3884586 | MS.gene55854:intron | 70.0% | |
| !! | AGGCCATCAGGGGGTGCTGG+AGG | + | chr4.3:3888751-3888770 | None:intergenic | 70.0% |
| !! | AGGGGGTGCTGGAGGAGCAG+TGG | + | chr4.3:3888743-3888762 | None:intergenic | 70.0% |
| CGTTGGGGGAGACGGGGGTG+CGG | - | chr4.3:3884549-3884568 | MS.gene55854:intron | 75.0% | |
| GCTCCCTCCACCCCTGCCCT+TGG | - | chr4.3:3884492-3884511 | MS.gene55854:intron | 75.0% | |
| ! | GTTGGGGGAGACGGGGGTGC+GGG | - | chr4.3:3884550-3884569 | MS.gene55854:intron | 75.0% |
| ! | TTGGGGGAGACGGGGGTGCG+GGG | - | chr4.3:3884551-3884570 | MS.gene55854:intron | 75.0% |
| !! | TGGGGGAGACGGGGGTGCGG+GGG | - | chr4.3:3884552-3884571 | MS.gene55854:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 3883456 | 3888834 | 3883456 | ID=MS.gene55854 |
| chr4.3 | mRNA | 3883456 | 3888834 | 3883456 | ID=MS.gene55854.t1;Parent=MS.gene55854 |
| chr4.3 | exon | 3888671 | 3888834 | 3888671 | ID=MS.gene55854.t1.exon1;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3888671 | 3888834 | 3888671 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| chr4.3 | exon | 3888479 | 3888584 | 3888479 | ID=MS.gene55854.t1.exon2;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3888479 | 3888584 | 3888479 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| chr4.3 | exon | 3888205 | 3888392 | 3888205 | ID=MS.gene55854.t1.exon3;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3888205 | 3888392 | 3888205 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| chr4.3 | exon | 3887982 | 3888127 | 3887982 | ID=MS.gene55854.t1.exon4;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3887982 | 3888127 | 3887982 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| chr4.3 | exon | 3886912 | 3887003 | 3886912 | ID=MS.gene55854.t1.exon5;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3886912 | 3887003 | 3886912 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| chr4.3 | exon | 3886476 | 3886762 | 3886476 | ID=MS.gene55854.t1.exon6;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3886476 | 3886762 | 3886476 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| chr4.3 | exon | 3886102 | 3886165 | 3886102 | ID=MS.gene55854.t1.exon7;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3886102 | 3886165 | 3886102 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| chr4.3 | exon | 3884241 | 3884303 | 3884241 | ID=MS.gene55854.t1.exon8;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3884241 | 3884303 | 3884241 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| chr4.3 | exon | 3883456 | 3883647 | 3883456 | ID=MS.gene55854.t1.exon9;Parent=MS.gene55854.t1 |
| chr4.3 | CDS | 3883456 | 3883647 | 3883456 | ID=cds.MS.gene55854.t1;Parent=MS.gene55854.t1 |
| Gene Sequence |
| Protein sequence |
