AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55943

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55943.t1 MTR_2g033170 96.024 327 13 0 1 327 1 327 0.0 525
MS.gene55943.t1 MTR_4g123040 65.957 329 86 8 1 324 1 308 1.11e-124 360
MS.gene55943.t1 MTR_1g086530 69.032 155 48 0 11 165 20 174 3.82e-82 250
MS.gene55943.t1 MTR_1g086510 68.047 169 47 2 18 186 15 176 6.76e-81 247
MS.gene55943.t1 MTR_1g110460 62.428 173 65 0 18 190 20 192 4.33e-78 241
MS.gene55943.t1 MTR_7g035075 82.301 113 20 0 18 130 8 120 2.76e-67 210
MS.gene55943.t1 MTR_6g006030 78.947 114 24 0 18 131 8 121 1.20e-65 206
MS.gene55943.t1 MTR_1g045610 70.476 105 31 0 25 129 22 126 1.17e-50 169
MS.gene55943.t1 MTR_1g073170 59.200 125 48 1 5 129 4 125 3.22e-49 165
MS.gene55943.t1 MTR_5g029840 56.693 127 53 1 20 146 8 132 9.81e-46 158
MS.gene55943.t1 MTR_8g027345 59.664 119 46 1 21 137 9 127 3.93e-44 153
MS.gene55943.t1 MTR_2g096380 57.273 110 47 0 23 132 5 114 5.79e-44 151
MS.gene55943.t1 MTR_2g089620 61.682 107 41 0 20 126 8 114 1.36e-43 152
MS.gene55943.t1 MTR_2g011660 58.559 111 46 0 24 134 13 123 1.52e-43 153
MS.gene55943.t1 MTR_4g063100 58.333 108 45 0 25 132 8 115 1.52e-43 150
MS.gene55943.t1 MTR_4g091490 58.559 111 46 0 24 134 13 123 3.57e-43 152
MS.gene55943.t1 MTR_4g125520 62.385 109 41 0 24 132 12 120 3.97e-43 151
MS.gene55943.t1 MTR_7g117730 63.303 109 40 0 21 129 9 117 4.00e-43 149
MS.gene55943.t1 MTR_3g052450 54.054 111 51 0 20 130 36 146 1.01e-42 155
MS.gene55943.t1 MTR_3g074520 55.000 120 54 0 20 139 8 127 1.03e-42 150
MS.gene55943.t1 MTR_5g007370 55.556 117 52 0 18 134 6 122 1.29e-42 149
MS.gene55943.t1 MTR_4g478180 56.522 115 50 0 20 134 9 123 1.55e-42 150
MS.gene55943.t1 MTR_3g083540 63.208 106 39 0 21 126 38 143 2.78e-42 149
MS.gene55943.t1 MTR_1g062940 58.879 107 44 0 23 129 5 111 4.20e-42 145
MS.gene55943.t1 MTR_1g076150 53.719 121 56 0 20 140 8 128 4.81e-42 147
MS.gene55943.t1 MTR_1g100653 58.879 107 44 0 24 130 12 118 8.84e-42 147
MS.gene55943.t1 MTR_3g052430 54.630 108 49 0 23 130 40 147 1.21e-41 152
MS.gene55943.t1 MTR_4g121460 39.791 191 92 2 20 210 8 175 1.55e-41 147
MS.gene55943.t1 MTR_6g012690 52.381 126 59 1 20 144 8 133 2.91e-41 147
MS.gene55943.t1 MTR_8g095390 62.376 101 38 0 26 126 14 114 3.51e-41 146
MS.gene55943.t1 MTR_8g042410 47.407 135 64 1 2 129 8 142 5.61e-41 150
MS.gene55943.t1 MTR_7g011170 53.043 115 54 0 20 134 8 122 5.68e-41 145
MS.gene55943.t1 MTR_1g017000 57.407 108 45 1 20 126 8 115 8.12e-41 143
MS.gene55943.t1 MTR_7g076740 56.034 116 50 1 20 134 8 123 9.70e-41 144
MS.gene55943.t1 MTR_1g085040 54.310 116 53 0 24 139 12 127 1.00e-40 146
MS.gene55943.t1 MTR_4g102380 53.913 115 53 0 20 134 8 122 1.16e-40 143
MS.gene55943.t1 MTR_4g073420 50.649 154 66 2 26 170 14 166 1.19e-40 144
MS.gene55943.t1 MTR_3g065440 50.794 126 61 1 20 144 8 133 1.23e-40 144
MS.gene55943.t1 MTR_2g097910 56.481 108 47 0 24 131 20 127 1.27e-40 144
MS.gene55943.t1 MTR_5g078140 53.043 115 54 0 20 134 8 122 1.35e-40 144
MS.gene55943.t1 MTR_3g097450 63.366 101 37 0 26 126 14 114 1.68e-40 144
MS.gene55943.t1 MTR_2g099740 56.311 103 45 0 24 126 12 114 2.01e-40 146
MS.gene55943.t1 MTR_1g043080 58.252 103 43 0 24 126 12 114 2.41e-40 142
MS.gene55943.t1 MTR_4g065017 56.481 108 47 0 24 131 17 124 2.60e-40 144
MS.gene55943.t1 MTR_7g115650 52.252 111 53 0 20 130 8 118 2.85e-40 140
MS.gene55943.t1 MTR_3g011610 54.717 106 48 0 24 129 37 142 5.19e-40 147
MS.gene55943.t1 MTR_4g082290 51.639 122 59 0 20 141 8 129 7.60e-40 144
MS.gene55943.t1 MTR_8g031360 56.881 109 46 1 19 126 8 116 8.09e-40 142
MS.gene55943.t1 MTR_4g485530 55.085 118 53 0 19 136 7 124 8.42e-40 139
MS.gene55943.t1 MTR_8g098860 57.009 107 46 0 24 130 12 118 1.16e-39 142
MS.gene55943.t1 MTR_7g110830 55.856 111 49 0 24 134 12 122 1.21e-39 143
MS.gene55943.t1 MTR_5g079670 49.587 121 61 0 20 140 7 127 1.24e-39 139
MS.gene55943.t1 MTR_7g096930 55.856 111 49 0 20 130 8 118 1.25e-39 141
MS.gene55943.t1 MTR_7g010210 35.039 254 146 7 20 257 8 258 1.38e-39 142
MS.gene55943.t1 MTR_4g082230 51.639 122 59 0 20 141 8 129 1.93e-39 144
MS.gene55943.t1 MTR_1g043050 57.282 103 44 0 24 126 12 114 2.63e-39 139
MS.gene55943.t1 MTR_2g067420 57.692 104 44 0 20 123 10 113 3.29e-39 141
MS.gene55943.t1 MTR_8g017440 56.311 103 45 0 24 126 12 114 3.39e-39 141
MS.gene55943.t1 MTR_0008s0390 55.455 110 49 0 19 128 8 117 4.16e-39 139
MS.gene55943.t1 MTR_1g021230 54.717 106 48 0 24 129 57 162 6.32e-39 143
MS.gene55943.t1 MTR_7g010210 40.000 180 97 4 20 189 8 186 8.40e-39 139
MS.gene55943.t1 MTR_0251s0050 54.464 112 51 0 19 130 8 119 8.80e-39 138
MS.gene55943.t1 MTR_1g100667 52.101 119 57 0 25 143 14 132 9.68e-39 138
MS.gene55943.t1 MTR_5g010020 61.856 97 37 0 24 120 12 108 1.10e-38 140
MS.gene55943.t1 MTR_2g034790 56.075 107 47 0 20 126 8 114 1.22e-38 140
MS.gene55943.t1 MTR_0008s0280 56.190 105 46 0 25 129 13 117 1.49e-38 137
MS.gene55943.t1 MTR_1g085640 54.054 111 51 0 24 134 12 122 2.17e-38 140
MS.gene55943.t1 MTR_0008s0470 56.190 105 46 0 24 128 13 117 2.58e-38 138
MS.gene55943.t1 MTR_2g064160 53.398 103 48 0 24 126 11 113 2.65e-38 138
MS.gene55943.t1 MTR_2g089420 52.893 121 56 1 24 143 11 131 4.01e-38 141
MS.gene55943.t1 MTR_8g017540 54.369 103 47 0 24 126 58 160 4.21e-38 140
MS.gene55943.t1 MTR_4g100720 56.881 109 47 0 24 132 13 121 5.21e-38 133
MS.gene55943.t1 MTR_3g028740 55.660 106 47 0 24 129 22 127 7.05e-38 138
MS.gene55943.t1 MTR_2g089450 56.075 107 47 0 20 126 8 114 7.16e-38 135
MS.gene55943.t1 MTR_7g111290 55.172 116 52 0 24 139 12 127 8.84e-38 139
MS.gene55943.t1 MTR_3g039990 49.107 112 57 0 20 131 9 120 1.45e-37 136
MS.gene55943.t1 MTR_8g020490 54.464 112 49 1 15 126 1 110 1.46e-37 135
MS.gene55943.t1 MTR_8g017500 53.398 103 48 0 24 126 12 114 1.69e-37 137
MS.gene55943.t1 MTR_6g009430 50.435 115 57 0 20 134 8 122 1.92e-37 137
MS.gene55943.t1 MTR_0140s0030 51.402 107 52 0 20 126 9 115 6.45e-37 135
MS.gene55943.t1 MTR_0489s0020 51.402 107 52 0 20 126 9 115 6.45e-37 135
MS.gene55943.t1 MTR_8g017340 54.808 104 46 1 24 126 12 115 7.15e-37 138
MS.gene55943.t1 MTR_7g087130 51.402 107 52 0 20 126 8 114 7.16e-37 135
MS.gene55943.t1 MTR_1g112760 55.340 103 46 0 24 126 13 115 7.23e-37 132
MS.gene55943.t1 MTR_0063s0090 47.656 128 60 1 20 147 8 128 1.27e-36 131
MS.gene55943.t1 MTR_3g077110 52.252 111 53 0 24 134 12 122 1.71e-36 134
MS.gene55943.t1 MTR_4g105130 54.369 103 47 0 24 126 12 114 3.25e-36 134
MS.gene55943.t1 MTR_6g012180 53.398 103 48 0 20 122 8 110 5.45e-36 132
MS.gene55943.t1 MTR_3g461490 49.593 123 61 1 23 144 11 133 5.64e-36 132
MS.gene55943.t1 MTR_4g057635 54.630 108 48 1 20 126 8 115 9.01e-36 132
MS.gene55943.t1 MTR_6g055910 54.902 102 46 0 25 126 15 116 1.18e-35 130
MS.gene55943.t1 MTR_5g042030 50.442 113 56 0 22 134 5 117 2.55e-35 130
MS.gene55943.t1 MTR_8g017350 52.885 104 48 1 24 126 12 115 3.16e-35 135
MS.gene55943.t1 MTR_8g017390 52.885 104 48 1 24 126 12 115 6.94e-35 132
MS.gene55943.t1 MTR_3g103570 54.630 108 48 1 20 126 8 115 1.05e-34 129
MS.gene55943.t1 MTR_2g088170 46.774 124 62 1 10 129 11 134 2.36e-34 130
MS.gene55943.t1 MTR_1g017140 53.704 108 49 1 20 126 8 115 2.65e-34 128
MS.gene55943.t1 MTR_2g095520 53.846 104 47 1 20 122 8 111 3.91e-34 127
MS.gene55943.t1 MTR_8g006470 44.068 118 65 1 15 131 1 118 4.65e-34 126
MS.gene55943.t1 MTR_1g083630 48.361 122 58 1 8 129 1 117 4.91e-34 132
MS.gene55943.t1 MTR_5g014990 51.724 116 53 2 20 132 8 123 5.45e-34 127
MS.gene55943.t1 MTR_0197s0010 36.316 190 111 3 29 215 6 188 1.48e-33 124
MS.gene55943.t1 MTR_7g109320 53.211 109 51 0 20 128 8 116 4.31e-33 125
MS.gene55943.t1 MTR_7g102110 50.000 108 53 1 20 126 8 115 5.06e-33 123
MS.gene55943.t1 MTR_4g063100 66.234 77 26 0 56 132 10 86 6.18e-33 122
MS.gene55943.t1 MTR_6g090405 52.778 108 50 1 20 126 8 115 8.02e-33 122
MS.gene55943.t1 MTR_4g097570 54.902 102 45 1 20 120 8 109 1.57e-32 122
MS.gene55943.t1 MTR_4g128670 53.846 104 47 1 20 122 8 111 1.54e-31 121
MS.gene55943.t1 MTR_2g096380 66.234 77 26 0 56 132 19 95 1.54e-31 118
MS.gene55943.t1 MTR_5g079120 42.537 134 77 0 6 139 43 176 2.39e-31 120
MS.gene55943.t1 MTR_4g097570 54.369 103 45 2 20 120 8 110 5.38e-31 118
MS.gene55943.t1 MTR_5g062790 44.643 112 61 1 16 126 1 112 6.46e-31 119
MS.gene55943.t1 MTR_5g088080 46.296 108 57 1 23 129 11 118 8.74e-31 117
MS.gene55943.t1 MTR_5g088150 46.296 108 57 1 23 129 11 118 8.74e-31 117
MS.gene55943.t1 MTR_5g488210 46.296 108 57 1 23 129 11 118 8.74e-31 117
MS.gene55943.t1 MTR_5g088640 46.296 108 57 1 23 129 11 118 9.22e-31 117
MS.gene55943.t1 MTR_5g078910 50.485 103 51 0 24 126 7 109 1.23e-30 117
MS.gene55943.t1 MTR_5g488170 46.296 108 57 1 23 129 11 118 1.59e-30 116
MS.gene55943.t1 MTR_8g060940 53.465 101 47 0 24 124 7 107 3.20e-30 115
MS.gene55943.t1 MTR_5g079290 50.485 103 51 0 24 126 17 119 3.30e-30 115
MS.gene55943.t1 MTR_0247s0040 51.961 102 49 0 24 125 7 108 4.19e-30 113
MS.gene55943.t1 MTR_5g078800 50.476 105 52 0 24 128 7 111 6.76e-30 115
MS.gene55943.t1 MTR_5g079220 50.485 103 51 0 24 126 21 123 1.60e-29 114
MS.gene55943.t1 MTR_5g078950 49.533 107 54 0 19 125 2 108 2.80e-29 113
MS.gene55943.t1 MTR_0001s0360 50.485 103 51 0 24 126 7 109 3.76e-29 112
MS.gene55943.t1 MTR_4g029540 42.056 107 61 1 24 129 10 116 4.34e-29 113
MS.gene55943.t1 MTR_5g088610 42.609 115 65 1 16 129 1 115 5.23e-29 114
MS.gene55943.t1 MTR_7g017260 46.087 115 60 1 16 128 17 131 6.52e-29 112
MS.gene55943.t1 MTR_5g078860 50.485 103 51 0 24 126 7 109 1.47e-28 112
MS.gene55943.t1 MTR_0193s0090 48.544 103 53 0 24 126 7 109 2.99e-28 108
MS.gene55943.t1 MTR_5g078930 45.528 123 63 1 25 143 10 132 6.05e-27 105
MS.gene55943.t1 MTR_5g016510 33.520 179 104 3 22 197 1 167 7.92e-27 108
MS.gene55943.t1 MTR_7g061330 44.231 104 57 1 23 126 110 212 3.63e-26 108
MS.gene55943.t1 MTR_7g461410 44.231 104 57 1 23 126 110 212 3.63e-26 108
MS.gene55943.t1 MTR_5g007300 55.844 77 34 0 24 100 64 140 5.96e-26 100
MS.gene55943.t1 MTR_7g061330 44.231 104 57 1 23 126 74 176 8.57e-26 107
MS.gene55943.t1 MTR_6g055910 61.429 70 27 0 57 126 18 87 9.47e-26 103
MS.gene55943.t1 MTR_3g045430 40.678 118 69 1 24 140 13 130 1.70e-25 103
MS.gene55943.t1 MTR_7g111290 58.333 84 35 0 56 139 2 85 1.75e-25 104
MS.gene55943.t1 MTR_3g110028 33.974 156 96 2 23 178 82 230 3.28e-25 106
MS.gene55943.t1 MTR_5g070020 30.601 183 124 2 9 189 103 284 9.73e-25 103
MS.gene55943.t1 MTR_4g128190 42.609 115 52 2 18 131 5 106 1.01e-24 100
MS.gene55943.t1 MTR_5g049190 41.509 106 60 2 26 130 19 123 3.18e-24 99.4
MS.gene55943.t1 MTR_6g015455 42.478 113 64 1 22 134 1 112 3.25e-24 103
MS.gene55943.t1 MTR_1g085880 44.348 115 62 2 18 130 5 119 3.95e-24 97.8
MS.gene55943.t1 MTR_4g019370 43.689 103 57 1 26 128 38 139 5.28e-24 100
MS.gene55943.t1 MTR_3g101290 41.284 109 63 1 20 128 31 138 5.40e-24 98.2
MS.gene55943.t1 MTR_6g027340 38.739 111 67 1 29 139 19 128 7.43e-24 97.4
MS.gene55943.t1 MTR_1g026870 40.385 104 61 1 23 126 82 184 1.55e-23 102
MS.gene55943.t1 MTR_1g085770 44.348 115 62 2 18 130 5 119 2.31e-23 98.2
MS.gene55943.t1 MTR_7g037260 37.008 127 79 1 21 147 140 265 2.96e-23 99.0
MS.gene55943.t1 MTR_4g088015 36.000 125 79 1 23 147 218 341 5.34e-23 99.4
MS.gene55943.t1 MTR_6g027360 37.069 116 72 1 24 139 76 190 1.27e-22 96.3
MS.gene55943.t1 MTR_3g077650 37.838 111 67 2 21 130 176 285 1.41e-22 98.2
MS.gene55943.t1 MTR_4g094982 40.187 107 63 1 22 128 1 106 1.62e-22 95.5
MS.gene55943.t1 MTR_3g463400 41.414 99 57 1 22 120 129 226 2.30e-22 97.4
MS.gene55943.t1 MTR_4g105660 33.083 133 88 1 1 133 155 286 4.85e-22 96.3
MS.gene55943.t1 MTR_7g450950 42.308 104 57 2 26 127 157 259 4.89e-21 92.4
MS.gene55943.t1 MTR_7g035350 44.565 92 50 1 29 120 228 318 6.07e-21 93.2
MS.gene55943.t1 MTR_5g010650 43.878 98 54 1 23 120 107 203 9.13e-21 92.8
MS.gene55943.t1 MTR_1g057980 42.000 100 57 1 21 120 75 173 1.05e-20 90.9
MS.gene55943.t1 MTR_7g086960 30.387 181 110 4 26 206 89 253 1.10e-20 91.7
MS.gene55943.t1 MTR_6g074860 44.211 95 52 1 26 120 4 97 1.67e-20 89.0
MS.gene55943.t1 MTR_7g451170 43.750 96 51 2 26 120 191 284 2.29e-20 91.3
MS.gene55943.t1 MTR_5g041570 40.000 105 62 1 26 130 134 237 4.34e-20 90.9
MS.gene55943.t1 MTR_6g027370 36.842 114 71 1 26 139 99 211 6.13e-20 89.4
MS.gene55943.t1 MTR_4g082040 39.048 105 63 1 26 130 105 208 9.80e-20 89.7
MS.gene55943.t1 MTR_5g082910 41.071 112 61 2 9 120 6 112 1.38e-19 87.4
MS.gene55943.t1 MTR_7g061550 36.283 113 70 1 26 136 7 119 1.55e-19 88.6
MS.gene55943.t1 MTR_3g089045 34.646 127 82 1 18 144 8 133 1.62e-18 84.7
MS.gene55943.t1 MTR_7g037130 30.719 153 103 2 12 164 133 282 5.42e-18 84.0
MS.gene55943.t1 MTR_8g468380 37.143 140 73 4 29 159 25 158 1.14e-17 83.6
MS.gene55943.t1 MTR_5g038910 40.594 101 59 1 29 129 29 128 2.38e-17 82.8
MS.gene55943.t1 MTR_5g038910 40.594 101 59 1 29 129 29 128 4.13e-17 81.6
MS.gene55943.t1 MTR_4g063100 64.706 51 18 0 82 132 1 51 5.35e-17 78.2
MS.gene55943.t1 MTR_2g096380 64.706 51 18 0 82 132 1 51 1.71e-16 76.6
MS.gene55943.t1 MTR_0023s0210 40.244 82 49 0 19 100 2 83 9.34e-14 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55943.t1 AT5G49620 54.154 325 83 11 19 324 21 298 1.33e-88 268
MS.gene55943.t1 AT1G48000 74.675 154 35 1 22 175 30 179 5.71e-85 256
MS.gene55943.t1 AT3G06490 50.148 337 111 11 1 316 1 301 6.35e-85 259
MS.gene55943.t1 AT5G49620 51.917 339 83 12 19 324 21 312 1.11e-84 258
MS.gene55943.t1 AT2G47190 74.648 142 36 0 19 160 15 156 1.46e-78 241
MS.gene55943.t1 AT1G68320 71.329 143 41 0 23 165 18 160 1.35e-74 231
MS.gene55943.t1 AT1G25340 63.576 151 55 0 25 175 19 169 9.88e-70 219
MS.gene55943.t1 AT3G27810 80.000 110 22 0 21 130 17 126 3.02e-65 205
MS.gene55943.t1 AT1G25340 60.927 151 54 1 25 175 19 164 3.15e-64 204
MS.gene55943.t1 AT1G25340 60.927 151 54 1 25 175 19 164 8.15e-64 204
MS.gene55943.t1 AT5G40350 80.952 105 20 0 23 127 16 120 1.31e-62 198
MS.gene55943.t1 AT3G01530 71.681 113 32 0 17 129 18 130 1.04e-60 193
MS.gene55943.t1 AT3G24310 67.890 109 35 0 21 129 15 123 4.68e-50 168
MS.gene55943.t1 AT4G13480 68.571 105 33 0 25 129 7 111 2.54e-49 166
MS.gene55943.t1 AT3G30210 66.667 105 35 0 25 129 28 132 3.85e-49 166
MS.gene55943.t1 AT3G02940 60.000 115 46 0 20 134 8 122 1.91e-45 157
MS.gene55943.t1 AT5G59780 59.091 110 45 0 23 132 7 116 3.37e-45 154
MS.gene55943.t1 AT3G46130 58.929 112 46 0 25 136 10 121 3.86e-45 155
MS.gene55943.t1 AT3G02940 60.000 115 46 0 20 134 8 122 3.91e-45 156
MS.gene55943.t1 AT3G02940 60.000 115 46 0 20 134 8 122 3.91e-45 156
MS.gene55943.t1 AT5G16770 53.676 136 61 2 20 153 8 143 6.62e-44 153
MS.gene55943.t1 AT5G16770 53.676 136 61 2 20 153 8 143 6.62e-44 153
MS.gene55943.t1 AT5G16770 53.676 136 61 2 20 153 8 143 1.23e-43 153
MS.gene55943.t1 AT5G16770 53.676 136 61 2 20 153 8 143 1.23e-43 153
MS.gene55943.t1 AT5G54230 56.757 111 48 0 24 134 12 122 1.62e-43 152
MS.gene55943.t1 AT3G27810 85.135 74 11 0 57 130 4 77 1.91e-43 147
MS.gene55943.t1 AT3G13540 55.285 123 55 0 21 143 20 142 3.58e-43 149
MS.gene55943.t1 AT4G05100 58.559 111 46 0 24 134 13 123 5.95e-43 151
MS.gene55943.t1 AT5G65230 54.918 122 55 0 18 139 6 127 6.42e-43 150
MS.gene55943.t1 AT4G34990 67.327 101 33 0 26 126 14 114 6.81e-43 149
MS.gene55943.t1 AT4G21440 56.757 111 48 0 24 134 12 122 7.41e-43 151
MS.gene55943.t1 AT3G23250 40.462 173 99 1 20 192 8 176 1.20e-42 149
MS.gene55943.t1 AT4G28110 58.879 107 44 0 20 126 8 114 1.63e-42 149
MS.gene55943.t1 AT5G15310 55.652 115 51 0 20 134 8 122 1.81e-42 150
MS.gene55943.t1 AT5G15310 55.652 115 51 0 20 134 8 122 1.93e-42 147
MS.gene55943.t1 AT5G15310 55.652 115 51 0 20 134 8 122 2.04e-42 149
MS.gene55943.t1 AT1G22640 57.265 117 50 0 24 140 12 128 2.74e-42 147
MS.gene55943.t1 AT1G16490 58.879 107 44 0 20 126 10 116 5.69e-42 147
MS.gene55943.t1 AT3G01140 52.033 123 59 0 20 142 8 130 6.43e-42 149
MS.gene55943.t1 AT5G10280 55.652 115 51 0 20 134 8 122 8.31e-42 148
MS.gene55943.t1 AT1G34670 50.746 134 65 1 20 153 8 140 1.05e-41 149
MS.gene55943.t1 AT3G01140 52.033 123 59 0 20 142 51 173 1.72e-41 149
MS.gene55943.t1 AT5G14340 56.522 115 50 0 20 134 20 134 1.89e-41 145
MS.gene55943.t1 AT1G35515 61.165 103 40 0 24 126 12 114 2.20e-41 144
MS.gene55943.t1 AT1G09540 55.172 116 52 0 24 139 12 127 3.18e-41 147
MS.gene55943.t1 AT4G09460 62.376 101 38 0 26 126 14 114 3.32e-41 144
MS.gene55943.t1 AT4G22680 52.500 120 57 0 20 139 8 127 3.40e-41 145
MS.gene55943.t1 AT1G18570 60.377 106 42 0 21 126 10 115 3.51e-41 147
MS.gene55943.t1 AT5G07690 58.252 103 43 0 24 126 12 114 6.22e-41 146
MS.gene55943.t1 AT4G12350 52.500 120 57 0 20 139 8 127 7.67e-41 144
MS.gene55943.t1 AT2G16720 61.165 103 40 0 24 126 12 114 8.75e-41 144
MS.gene55943.t1 AT3G53200 60.377 106 42 0 21 126 6 111 1.01e-40 142
MS.gene55943.t1 AT5G40350 84.507 71 11 0 57 127 5 75 1.13e-40 140
MS.gene55943.t1 AT1G57560 60.194 103 41 0 24 126 12 114 1.31e-40 144
MS.gene55943.t1 AT4G38620 62.376 101 38 0 26 126 14 114 1.35e-40 144
MS.gene55943.t1 AT1G57560 60.194 103 41 0 24 126 12 114 1.54e-40 143
MS.gene55943.t1 AT2G47460 59.813 107 43 0 20 126 8 114 1.59e-40 145
MS.gene55943.t1 AT3G13890 56.311 103 45 0 24 126 12 114 1.60e-40 145
MS.gene55943.t1 AT5G40330 53.509 114 53 0 13 126 1 114 1.86e-40 141
MS.gene55943.t1 AT5G14750 56.731 104 45 0 23 126 15 118 2.11e-40 140
MS.gene55943.t1 AT1G79180 54.955 111 50 0 20 130 10 120 2.25e-40 143
MS.gene55943.t1 AT5G07700 57.282 103 44 0 24 126 12 114 2.30e-40 144
MS.gene55943.t1 AT5G07700 57.282 103 44 0 24 126 12 114 2.30e-40 144
MS.gene55943.t1 AT5G61420 57.282 103 44 0 24 126 12 114 3.96e-40 144
MS.gene55943.t1 AT1G06180 52.893 121 57 0 20 140 8 128 4.60e-40 141
MS.gene55943.t1 AT1G66230 52.174 115 55 0 20 134 8 122 5.82e-40 142
MS.gene55943.t1 AT3G47600 51.282 117 55 1 20 134 8 124 6.80e-40 143
MS.gene55943.t1 AT3G11440 54.369 103 47 0 24 126 41 143 6.81e-40 146
MS.gene55943.t1 AT1G56160 57.009 107 46 0 20 126 10 116 7.61e-40 142
MS.gene55943.t1 AT3G61250 50.833 120 59 0 20 139 8 127 8.17e-40 142
MS.gene55943.t1 AT2G31180 57.944 107 45 0 20 126 8 114 8.64e-40 140
MS.gene55943.t1 AT5G26660 54.955 111 50 0 24 134 12 122 8.69e-40 143
MS.gene55943.t1 AT5G16600 52.174 115 55 0 20 134 8 122 1.09e-39 142
MS.gene55943.t1 AT5G60890 55.652 115 51 0 21 135 9 123 1.14e-39 141
MS.gene55943.t1 AT3G27920 56.731 104 45 0 23 126 13 116 1.76e-39 139
MS.gene55943.t1 AT4G26930 55.140 107 48 0 24 130 19 125 2.04e-39 143
MS.gene55943.t1 AT3G11440 54.369 103 47 0 24 126 41 143 4.15e-39 145
MS.gene55943.t1 AT3G11440 54.369 103 47 0 24 126 41 143 4.15e-39 145
MS.gene55943.t1 AT3G11440 54.369 103 47 0 24 126 41 143 4.15e-39 145
MS.gene55943.t1 AT5G49330 57.944 107 45 0 20 126 8 114 4.53e-39 141
MS.gene55943.t1 AT5G35550 61.538 104 40 0 23 126 13 116 5.02e-39 139
MS.gene55943.t1 AT5G06100 53.774 106 49 0 24 129 32 137 5.72e-39 143
MS.gene55943.t1 AT1G63910 56.075 107 47 0 24 130 12 118 7.51e-39 141
MS.gene55943.t1 AT3G62610 57.009 107 46 0 20 126 8 114 8.94e-39 140
MS.gene55943.t1 AT3G08500 58.491 106 44 0 24 129 30 135 1.36e-38 140
MS.gene55943.t1 AT4G17785 53.448 116 54 0 19 134 8 123 1.66e-38 140
MS.gene55943.t1 AT4G17785 53.448 116 54 0 19 134 8 123 1.76e-38 140
MS.gene55943.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.08e-38 143
MS.gene55943.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.08e-38 143
MS.gene55943.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.08e-38 143
MS.gene55943.t1 AT5G06100 53.774 106 49 0 24 129 32 137 2.08e-38 143
MS.gene55943.t1 AT2G32460 51.887 106 51 0 24 129 18 123 2.12e-38 142
MS.gene55943.t1 AT2G32460 51.887 106 51 0 24 129 6 111 2.16e-38 142
MS.gene55943.t1 AT5G62320 48.872 133 61 1 20 145 9 141 3.60e-38 136
MS.gene55943.t1 AT5G55020 51.327 113 55 0 18 130 20 132 5.14e-38 142
MS.gene55943.t1 AT5G52600 56.311 103 45 0 24 126 12 114 1.10e-37 134
MS.gene55943.t1 AT1G74080 57.282 103 44 0 24 126 12 114 1.12e-37 137
MS.gene55943.t1 AT5G62470 50.000 112 56 0 20 131 8 119 1.15e-37 137
MS.gene55943.t1 AT5G12870 51.852 108 52 0 24 131 18 125 1.37e-37 135
MS.gene55943.t1 AT3G13890 51.786 112 45 1 24 126 12 123 1.51e-37 137
MS.gene55943.t1 AT1G08810 46.032 126 68 0 20 145 8 133 1.78e-37 135
MS.gene55943.t1 AT1G74650 49.558 113 57 0 20 132 8 120 1.86e-37 137
MS.gene55943.t1 AT3G12720 51.456 103 50 0 24 126 22 124 2.74e-37 135
MS.gene55943.t1 AT4G01680 56.311 103 45 0 24 126 12 114 3.94e-37 133
MS.gene55943.t1 AT4G01680 54.717 106 48 0 24 129 12 117 6.97e-37 135
MS.gene55943.t1 AT2G26960 50.442 113 52 1 18 126 10 122 3.07e-36 135
MS.gene55943.t1 AT3G28910 49.565 115 58 0 20 134 8 122 7.42e-36 132
MS.gene55943.t1 AT4G37780 53.704 108 49 1 20 126 8 115 8.21e-36 132
MS.gene55943.t1 AT5G62470 50.000 112 55 1 20 131 8 118 9.83e-36 132
MS.gene55943.t1 AT1G74430 53.398 103 48 0 24 126 12 114 4.23e-35 129
MS.gene55943.t1 AT5G56110 49.593 123 61 1 23 144 11 133 4.23e-35 130
MS.gene55943.t1 AT4G25560 53.922 102 47 0 25 126 11 112 5.21e-35 129
MS.gene55943.t1 AT3G49690 53.704 108 49 1 20 126 8 115 1.26e-34 129
MS.gene55943.t1 AT3G12820 53.271 107 50 0 20 126 10 116 1.45e-34 126
MS.gene55943.t1 AT3G48920 50.980 102 50 0 25 126 19 120 1.94e-34 127
MS.gene55943.t1 AT5G57620 52.778 108 50 1 20 126 8 115 2.55e-34 128
MS.gene55943.t1 AT3G28470 50.485 103 51 0 20 122 8 110 2.73e-34 128
MS.gene55943.t1 AT5G52260 55.882 102 45 0 25 126 13 114 3.14e-34 126
MS.gene55943.t1 AT5G23000 51.852 108 51 1 20 126 8 115 3.80e-34 128
MS.gene55943.t1 AT1G79180 42.361 144 50 1 20 130 10 153 7.38e-34 127
MS.gene55943.t1 AT2G36890 53.704 108 49 1 20 126 8 115 9.74e-34 126
MS.gene55943.t1 AT5G65790 48.000 125 60 2 20 143 8 128 1.18e-33 127
MS.gene55943.t1 AT4G01680 49.153 118 48 1 24 129 12 129 1.77e-33 126
MS.gene55943.t1 AT2G36890 53.704 108 49 1 20 126 49 156 1.91e-33 126
MS.gene55943.t1 AT3G46130 64.634 82 29 0 55 136 8 89 3.62e-33 122
MS.gene55943.t1 AT5G59780 68.421 76 24 0 57 132 20 95 7.70e-33 121
MS.gene55943.t1 AT3G46130 66.250 80 27 0 57 136 20 99 1.10e-32 121
MS.gene55943.t1 AT1G66370 50.000 110 55 0 24 133 8 117 2.84e-32 120
MS.gene55943.t1 AT3G60460 44.545 110 60 1 23 131 10 119 8.99e-32 120
MS.gene55943.t1 AT1G18710 49.515 103 52 0 24 126 12 114 6.71e-31 117
MS.gene55943.t1 AT3G53200 67.143 70 23 0 57 126 9 78 3.54e-29 111
MS.gene55943.t1 AT1G66380 53.398 103 48 0 24 126 8 110 3.67e-28 107
MS.gene55943.t1 AT1G56650 40.116 172 101 2 24 195 8 177 4.56e-28 109
MS.gene55943.t1 AT5G26660 58.974 78 32 0 57 134 14 91 2.80e-27 109
MS.gene55943.t1 AT1G66390 53.398 103 48 0 24 126 8 110 5.58e-27 107
MS.gene55943.t1 AT5G35550 63.158 76 28 0 51 126 44 119 1.47e-26 106
MS.gene55943.t1 AT3G47600 57.500 80 32 1 57 134 39 118 8.40e-26 105
MS.gene55943.t1 AT5G11050 38.519 135 75 3 26 154 105 237 1.03e-25 106
MS.gene55943.t1 AT2G26950 39.640 111 63 1 17 123 5 115 2.10e-25 105
MS.gene55943.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.99e-25 107
MS.gene55943.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.99e-25 107
MS.gene55943.t1 AT5G11510 43.269 104 58 1 23 126 78 180 2.99e-25 107
MS.gene55943.t1 AT5G11510 43.269 104 58 1 23 126 78 180 3.28e-25 106
MS.gene55943.t1 AT5G11510 43.269 104 58 1 23 126 78 180 3.42e-25 106
MS.gene55943.t1 AT3G09370 41.121 107 62 1 23 129 132 237 7.16e-25 105
MS.gene55943.t1 AT3G09370 41.121 107 62 1 23 129 127 232 7.68e-25 105
MS.gene55943.t1 AT3G09370 41.121 107 62 1 23 129 140 245 1.10e-24 104
MS.gene55943.t1 AT5G14750 62.687 67 25 0 60 126 18 84 1.34e-24 98.2
MS.gene55943.t1 AT3G12820 64.179 67 24 0 60 126 2 68 1.50e-24 99.0
MS.gene55943.t1 AT5G58850 38.525 122 68 2 23 138 102 222 2.11e-24 103
MS.gene55943.t1 AT3G27785 41.667 108 61 2 26 132 189 295 2.52e-24 102
MS.gene55943.t1 AT5G02320 41.346 104 60 1 23 126 124 226 2.77e-24 103
MS.gene55943.t1 AT5G02320 41.346 104 60 1 23 126 124 226 2.77e-24 103
MS.gene55943.t1 AT5G02320 41.346 104 60 1 23 126 64 166 5.45e-24 102
MS.gene55943.t1 AT4G18770 40.000 110 65 1 24 133 215 323 6.65e-24 101
MS.gene55943.t1 AT2G23290 42.593 108 61 1 21 128 8 114 1.26e-23 99.4
MS.gene55943.t1 AT4G32730 38.462 104 63 1 23 126 84 186 9.52e-23 99.8
MS.gene55943.t1 AT4G32730 38.462 104 63 1 23 126 84 186 9.52e-23 99.8
MS.gene55943.t1 AT4G32730 38.462 104 63 1 23 126 84 186 9.52e-23 99.8
MS.gene55943.t1 AT4G32730 38.462 104 63 1 23 126 84 186 9.52e-23 99.8
MS.gene55943.t1 AT4G32730 38.462 104 63 1 23 126 84 186 1.20e-22 99.4
MS.gene55943.t1 AT4G37260 39.823 113 62 2 26 138 13 119 4.95e-22 95.1
MS.gene55943.t1 AT5G67300 33.974 156 94 3 23 178 3 149 8.26e-22 94.0
MS.gene55943.t1 AT2G39880 38.971 136 79 3 26 160 50 182 1.06e-21 94.7
MS.gene55943.t1 AT3G55730 40.566 106 62 1 26 131 56 160 2.47e-21 94.0
MS.gene55943.t1 AT3G09230 43.269 104 58 1 23 126 52 154 5.96e-21 92.8
MS.gene55943.t1 AT1G69560 40.000 105 62 1 26 130 107 210 6.12e-21 92.0
MS.gene55943.t1 AT1G69560 40.000 105 62 1 26 130 123 226 6.46e-21 92.4
MS.gene55943.t1 AT1G17950 41.905 105 60 1 26 130 5 108 6.58e-21 90.5
MS.gene55943.t1 AT3G29020 40.000 105 62 1 26 130 65 168 9.36e-21 89.7
MS.gene55943.t1 AT3G29020 40.000 105 62 1 26 130 67 170 1.19e-20 90.9
MS.gene55943.t1 AT1G26780 39.252 107 64 1 24 130 96 201 1.24e-20 91.7
MS.gene55943.t1 AT1G26780 42.424 99 56 1 24 122 96 193 1.87e-20 89.7
MS.gene55943.t1 AT5G17800 40.541 111 59 2 26 130 93 202 2.14e-20 90.5
MS.gene55943.t1 AT5G40360 36.364 110 68 2 24 132 156 264 5.79e-20 89.7
MS.gene55943.t1 AT3G50060 37.736 106 65 1 23 128 3 107 8.84e-20 88.2
MS.gene55943.t1 AT1G22640 56.338 71 31 0 70 140 1 71 9.05e-20 86.3
MS.gene55943.t1 AT1G73410 42.857 105 59 1 26 130 6 109 1.21e-19 87.0
MS.gene55943.t1 AT1G73410 42.857 105 59 1 26 130 6 109 2.35e-19 85.1
MS.gene55943.t1 AT2G25230 40.566 106 59 2 23 125 23 127 2.38e-19 85.9
MS.gene55943.t1 AT3G23250 34.959 123 76 1 70 192 1 119 2.49e-19 85.5
MS.gene55943.t1 AT1G66380 58.571 70 29 0 57 126 8 77 1.38e-18 80.1
MS.gene55943.t1 AT4G33450 38.679 106 64 1 25 130 18 122 1.87e-18 83.6
MS.gene55943.t1 AT5G39700 38.889 108 65 1 15 122 45 151 3.76e-18 81.6
MS.gene55943.t1 AT5G59780 66.667 51 17 0 82 132 1 51 4.52e-18 80.9
MS.gene55943.t1 AT3G46130 63.636 55 20 0 82 136 1 55 5.31e-18 81.3
MS.gene55943.t1 AT1G71030 39.000 100 60 1 48 147 5 103 2.19e-17 79.7
MS.gene55943.t1 AT1G14350 40.594 101 59 1 29 129 28 127 3.11e-17 82.4
MS.gene55943.t1 AT1G14350 40.594 101 59 1 29 129 28 127 3.11e-17 82.4
MS.gene55943.t1 AT2G37630 35.780 109 68 1 26 132 4 112 3.41e-17 82.0
MS.gene55943.t1 AT5G14750 57.895 57 24 0 70 126 1 57 3.54e-17 77.4
MS.gene55943.t1 AT5G14750 57.895 57 24 0 70 126 1 57 3.54e-17 77.4
MS.gene55943.t1 AT1G71030 42.353 85 49 0 63 147 5 89 3.99e-17 78.6
MS.gene55943.t1 AT1G66380 50.794 63 31 0 24 86 8 70 7.95e-17 75.5
MS.gene55943.t1 AT2G02820 33.333 162 93 4 15 166 17 173 1.10e-16 80.9
MS.gene55943.t1 AT2G02820 33.333 162 93 4 15 166 17 173 1.17e-16 80.9
MS.gene55943.t1 AT4G00540 36.036 111 67 2 24 131 101 210 1.30e-16 80.5
MS.gene55943.t1 AT4G00540 36.036 111 67 2 24 131 99 208 2.51e-16 79.7
MS.gene55943.t1 AT2G02820 33.333 162 93 4 15 166 17 173 3.08e-16 78.6
MS.gene55943.t1 AT1G18960 32.110 109 71 2 26 134 10 115 3.62e-16 78.2
MS.gene55943.t1 AT5G40430 36.792 106 62 3 23 125 51 154 4.09e-15 74.3
MS.gene55943.t1 AT4G25560 60.000 45 18 0 82 126 2 46 9.93e-13 67.0
MS.gene55943.t1 AT1G14350 44.444 63 35 0 68 130 23 85 6.53e-11 63.2
MS.gene55943.t1 AT1G14350 44.444 63 35 0 68 130 23 85 6.53e-11 63.2

Find 87 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTAAGTATTGTGCAATTT+TGG 0.168994 2.3:+57300381 None:intergenic
TGTTGGTAATAATCAGAATT+AGG 0.176139 2.3:+57299890 None:intergenic
TACCAACAAGCTCAGCAATT+TGG 0.199585 2.3:-57299875 MS.gene55943:CDS
GGGACACATCTGACAATTTC+TGG 0.217259 2.3:-57299766 MS.gene55943:CDS
ATCTCGTTGTCTGTTCTTCC+CGG 0.266163 2.3:+57300361 None:intergenic
ACAACGAGATCAAGAATTAT+TGG 0.314777 2.3:-57300348 MS.gene55943:CDS
CCTTGAATCCAAGGAGTGTT+TGG 0.318256 2.3:+57299788 None:intergenic
ACCAACAAGCTCAGCAATTT+GGG 0.318446 2.3:-57299874 MS.gene55943:CDS
GCTGCATCATCGGATTCATT+TGG 0.322005 2.3:-57299989 MS.gene55943:CDS
GGTGGCTCGGGTGGCGGAGG+TGG 0.323196 2.3:+57300204 None:intergenic
TGGCGCCGCGGCTGCATCAT+CGG 0.345089 2.3:-57299999 MS.gene55943:CDS
GTTGGTAATAATCAGAATTA+GGG 0.353037 2.3:+57299891 None:intergenic
ATCTGGATTGTTCCCTCAAA+TGG 0.353663 2.3:-57299828 MS.gene55943:CDS
CCTTTGGATGCCAAGGTTAG+TGG 0.355811 2.3:-57300248 MS.gene55943:CDS
TACGTCACATTTGAGTTGTT+TGG 0.355884 2.3:+57300303 None:intergenic
TTCATAGTCGTTGGGGAAAC+CGG 0.357053 2.3:-57300682 MS.gene55943:intron
CGAGCCACCGCCACTAATAA+TGG 0.357709 2.3:-57300190 MS.gene55943:CDS
CAAAATTGCACAATACTTAC+CGG 0.367480 2.3:-57300380 MS.gene55943:CDS
ATGTTACCACGACGAACATC+TGG 0.367650 2.3:+57300737 None:intergenic
GATTGCATCACTAGCCCATC+TGG 0.373109 2.3:-57299845 MS.gene55943:CDS
CTGCATCATCGGATTCATTT+GGG 0.373323 2.3:-57299988 MS.gene55943:CDS
GGCGGTGGCTCGGGTGGCGG+AGG 0.377228 2.3:+57300201 None:intergenic
AAGATGCCATGCGCTACCTT+TGG 0.397038 2.3:-57300264 MS.gene55943:CDS
CATTATTAGTGGCGGTGGCT+CGG 0.400688 2.3:+57300191 None:intergenic
ACCCAAATTGCTGAGCTTGT+TGG 0.406996 2.3:+57299873 None:intergenic
TGTTGGTGTTCATAATTGTT+GGG 0.412586 2.3:+57300074 None:intergenic
CCAAGGAGTGTTTGGTTCCA+TGG 0.416961 2.3:+57299796 None:intergenic
CCAAACACTCCTTGGATTCA+AGG 0.418970 2.3:-57299788 MS.gene55943:CDS
TTCTTGAACTTCATAGTCGT+TGG 0.421499 2.3:-57300691 MS.gene55943:CDS
TCTTGAACTTCATAGTCGTT+GGG 0.421944 2.3:-57300690 MS.gene55943:CDS
ATCAATTACATTGCAAATCA+TGG 0.428806 2.3:-57301445 MS.gene55943:CDS
TCGGGTGGCGGAGGTGGATG+CGG 0.434916 2.3:+57300210 None:intergenic
AGTGGCGGTGGCTCGGGTGG+CGG 0.441443 2.3:+57300198 None:intergenic
ATTATTAGTGGCGGTGGCTC+GGG 0.451809 2.3:+57300192 None:intergenic
ATTTCAATATTTCATGGAAG+TGG 0.456263 2.3:-57301569 None:intergenic
TATTGTTGTTACTACCAACT+TGG 0.458463 2.3:+57299918 None:intergenic
CCATGGAACCAAACACTCCT+TGG 0.463876 2.3:-57299796 MS.gene55943:CDS
TCTTGAGTCAATTCCGAGAC+AGG 0.470088 2.3:+57299953 None:intergenic
ATGAACACCAACAATTTATG+TGG 0.470396 2.3:-57300064 MS.gene55943:CDS
GTTATAGGACTCAAACGAAC+GGG 0.473603 2.3:-57300797 MS.gene55943:intron
CGGAGGTGGATGCGGCAGCT+TGG 0.476078 2.3:+57300218 None:intergenic
TATGTTATATGTCGTATTGT+TGG 0.476207 2.3:+57300138 None:intergenic
TCAAATGGATTTCAGTTCCA+TGG 0.479194 2.3:-57299813 MS.gene55943:CDS
ACTTGGTGAACCATTATTAG+TGG 0.482800 2.3:+57300180 None:intergenic
AACACTCTTGCTCGTTCAGC+TGG 0.485635 2.3:-57301409 MS.gene55943:intron
GACACAAGTTTCGCCTGTCT+CGG 0.486609 2.3:-57299966 MS.gene55943:CDS
GCGCCATTGCTACTATTCTC+TGG 0.490228 2.3:+57300016 None:intergenic
TTGTTGGTGTTCATAATTGT+TGG 0.495169 2.3:+57300073 None:intergenic
ATGGAACTGAAATCCATTTG+AGG 0.515326 2.3:+57299815 None:intergenic
GTTATATGTCGTATTGTTGG+TGG 0.520096 2.3:+57300141 None:intergenic
TGAACCATTATTAGTGGCGG+TGG 0.522243 2.3:+57300186 None:intergenic
CAAATCATGGTGAAGGTCGA+TGG 0.524948 2.3:-57301432 MS.gene55943:CDS
GATCCAACTCATCATCACTT+TGG 0.528166 2.3:+57301509 None:intergenic
CTCATCATCACTTTGGAGCA+TGG 0.530302 2.3:+57301516 None:intergenic
TGGAACTGAAATCCATTTGA+GGG 0.531486 2.3:+57299816 None:intergenic
TGCGCTACCTTTGGATGCCA+AGG 0.532069 2.3:-57300255 MS.gene55943:CDS
CAAACACTCCTTGGATTCAA+GGG 0.533991 2.3:-57299787 MS.gene55943:CDS
AGATCTTCATCGACGGTCCA+TGG 0.536902 2.3:+57301475 None:intergenic
ATTAGTGGCGGTGGCTCGGG+TGG 0.538647 2.3:+57300195 None:intergenic
ATGTGAACCACATAAATTGT+TGG 0.544638 2.3:+57300057 None:intergenic
GATTATTACAATGTCCAAGT+TGG 0.548318 2.3:-57299932 MS.gene55943:CDS
CTTGAACTTCATAGTCGTTG+GGG 0.553574 2.3:-57300689 MS.gene55943:CDS
TACATTGCAAATCATGGTGA+AGG 0.554565 2.3:-57301439 MS.gene55943:CDS
GATGTGTCCCCTTGAATCCA+AGG 0.564896 2.3:+57299779 None:intergenic
CAATATTTCATGGAAGTGGA+AGG 0.568241 2.3:-57301565 None:intergenic
CCACTAACCTTGGCATCCAA+AGG 0.583224 2.3:+57300248 None:intergenic
GCTCCAAAGTGATGATGAGT+TGG 0.588477 2.3:-57301512 MS.gene55943:CDS
GTTGGTGTTCATAATTGTTG+GGG 0.592982 2.3:+57300075 None:intergenic
TGGATGCGCTCCACTAACCT+TGG 0.601618 2.3:+57300238 None:intergenic
ACTAATAATGGTTCACCAAG+TGG 0.601663 2.3:-57300178 MS.gene55943:CDS
ACTCCAGAGAATAGTAGCAA+TGG 0.604297 2.3:-57300019 MS.gene55943:CDS
ATTTGAGGGAACAATCCAGA+TGG 0.604631 2.3:+57299830 None:intergenic
TGAATCCGATGATGCAGCCG+CGG 0.612957 2.3:+57299994 None:intergenic
TGTTATAGGACTCAAACGAA+CGG 0.615232 2.3:-57300798 MS.gene55943:intron
GCAAGAGCTGTAGATTGAGA+TGG 0.621101 2.3:-57300775 MS.gene55943:CDS
TGGCATCCAAAGGTAGCGCA+TGG 0.621698 2.3:+57300258 None:intergenic
GTGACCGCTGTTGTACCACT+TGG 0.627383 2.3:+57300163 None:intergenic
AAAATTGCACAATACTTACC+GGG 0.631573 2.3:-57300379 MS.gene55943:CDS
TGGATCTTCGAAGAGGACCA+TGG 0.638658 2.3:-57301492 MS.gene55943:CDS
TTTGAGGGAACAATCCAGAT+GGG 0.640469 2.3:+57299831 None:intergenic
TGGTGAACCATTATTAGTGG+CGG 0.649612 2.3:+57300183 None:intergenic
GAGAGCAAGATCTTCATCGA+CGG 0.650210 2.3:+57301468 None:intergenic
AAACACTCCTTGGATTCAAG+GGG 0.650871 2.3:-57299786 MS.gene55943:CDS
GAATAGTAGCAATGGCGCCG+CGG 0.659766 2.3:-57300011 MS.gene55943:CDS
CTTCGTCCAGATGTTCGTCG+TGG 0.664020 2.3:-57300743 MS.gene55943:CDS
GATGAGTTGGATCTTCGAAG+AGG 0.682976 2.3:-57301499 MS.gene55943:CDS
TTCACCAAGTGGTACAACAG+CGG 0.730136 2.3:-57300167 MS.gene55943:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAACTATATATTTATATTA+TGG - chr2.3:57299949-57299968 MS.gene55943:CDS 10.0%
!!! TTTTTTACTTTATTTAATAC+GGG + chr2.3:57300383-57300402 None:intergenic 10.0%
!! AAAAACAAAATTTCTTCAAT+TGG + chr2.3:57300460-57300479 None:intergenic 15.0%
!!! AGAAATTTTGTTTTTGTTAT+AGG - chr2.3:57300465-57300484 MS.gene55943:intron 15.0%
!!! GTATATTTTTCTAGTTTTTA+TGG - chr2.3:57299916-57299935 MS.gene55943:CDS 15.0%
!!! TCTTTCTAATTTTAAAATGT+TGG - chr2.3:57300826-57300845 MS.gene55943:intron 15.0%
!!! TTTCTGTCTTTAATTTATTT+TGG - chr2.3:57300795-57300814 MS.gene55943:intron 15.0%
!! ATGAAATACCATATAACTAT+AGG - chr2.3:57300262-57300281 MS.gene55943:CDS 20.0%
!! CAATTAGAATACTTAAGTTA+TGG - chr2.3:57300673-57300692 MS.gene55943:intron 20.0%
!! CTAGTTAATTTCTATAATTG+TGG - chr2.3:57300058-57300077 MS.gene55943:CDS 20.0%
!! GGGCATAAATAAATTAATTA+TGG - chr2.3:57300237-57300256 MS.gene55943:CDS 20.0%
!! TATTTGATTGATCAATTAGA+TGG - chr2.3:57300872-57300891 MS.gene55943:intron 20.0%
! AAATACCATATAACTATAGG+TGG - chr2.3:57300265-57300284 MS.gene55943:CDS 25.0%
! ATCAATTACATTGCAAATCA+TGG - chr2.3:57299832-57299851 MS.gene55943:CDS 25.0%
! CTAACATAATCACTATCATA+TGG + chr2.3:57300177-57300196 None:intergenic 25.0%
! CTAATATTTAACGACGAATT+TGG + chr2.3:57300744-57300763 None:intergenic 25.0%
! TATGTTATATGTCGTATTGT+TGG + chr2.3:57301142-57301161 None:intergenic 25.0%
!!! GCTTTTTCCAAAAAATTGAT+TGG + chr2.3:57300122-57300141 None:intergenic 25.0%
!!! GTTGGTAATAATCAGAATTA+GGG + chr2.3:57301389-57301408 None:intergenic 25.0%
!!! TGTTGGTAATAATCAGAATT+AGG + chr2.3:57301390-57301409 None:intergenic 25.0%
AAAATTGCACAATACTTACC+GGG - chr2.3:57300898-57300917 MS.gene55943:intron 30.0%
AAGAAAAAAACCGCAAACTT+TGG + chr2.3:57300144-57300163 None:intergenic 30.0%
ACAACGAGATCAAGAATTAT+TGG - chr2.3:57300929-57300948 MS.gene55943:intron 30.0%
ATGAACACCAACAATTTATG+TGG - chr2.3:57301213-57301232 MS.gene55943:intron 30.0%
ATGTGAACCACATAAATTGT+TGG + chr2.3:57301223-57301242 None:intergenic 30.0%
CAAAATTGCACAATACTTAC+CGG - chr2.3:57300897-57300916 MS.gene55943:intron 30.0%
GATTATTACAATGTCCAAGT+TGG - chr2.3:57301345-57301364 MS.gene55943:intron 30.0%
TATGCCTTATATTAAAGTCC+TGG + chr2.3:57300200-57300219 None:intergenic 30.0%
TTAGCCAGGACTTTAATATA+AGG - chr2.3:57300193-57300212 MS.gene55943:CDS 30.0%
TTCATGATTGCAATTGTTGA+TGG - chr2.3:57299986-57300005 MS.gene55943:CDS 30.0%
! TATTGTTGTTACTACCAACT+TGG + chr2.3:57301362-57301381 None:intergenic 30.0%
! TGTTGGTGTTCATAATTGTT+GGG + chr2.3:57301206-57301225 None:intergenic 30.0%
! TTGTTGGTGTTCATAATTGT+TGG + chr2.3:57301207-57301226 None:intergenic 30.0%
!!! CATCACACCAATCAATTTTT+TGG - chr2.3:57300112-57300131 MS.gene55943:CDS 30.0%
ACTAATAATGGTTCACCAAG+TGG - chr2.3:57301099-57301118 MS.gene55943:intron 35.0%
ATGGAACTGAAATCCATTTG+AGG + chr2.3:57301465-57301484 None:intergenic 35.0%
CAATCATGAAACAGCTATAG+TGG + chr2.3:57299976-57299995 None:intergenic 35.0%
GCAGCCAAGCAATTATATAT+GGG + chr2.3:57300291-57300310 None:intergenic 35.0%
GTTATATGTCGTATTGTTGG+TGG + chr2.3:57301139-57301158 None:intergenic 35.0%
TACATTGCAAATCATGGTGA+AGG - chr2.3:57299838-57299857 MS.gene55943:CDS 35.0%
TCTTGAACTTCATAGTCGTT+GGG - chr2.3:57300587-57300606 MS.gene55943:intron 35.0%
TGCAGCCAAGCAATTATATA+TGG + chr2.3:57300292-57300311 None:intergenic 35.0%
TGCATGTATCTATTGCTTAC+CGG + chr2.3:57300617-57300636 None:intergenic 35.0%
TGGAACTGAAATCCATTTGA+GGG + chr2.3:57301464-57301483 None:intergenic 35.0%
TGTTATAGGACTCAAACGAA+CGG - chr2.3:57300479-57300498 MS.gene55943:intron 35.0%
TTCTTGAACTTCATAGTCGT+TGG - chr2.3:57300586-57300605 MS.gene55943:intron 35.0%
TTGGAAAAAGCCAAAGTTTG+CGG - chr2.3:57300131-57300150 MS.gene55943:CDS 35.0%
! ACTTGGTGAACCATTATTAG+TGG + chr2.3:57301100-57301119 None:intergenic 35.0%
! CATAGCGTTGAAGAAAATAG+TGG + chr2.3:57300026-57300045 None:intergenic 35.0%
! GTTGGTGTTCATAATTGTTG+GGG + chr2.3:57301205-57301224 None:intergenic 35.0%
! TCAAATGGATTTCAGTTCCA+TGG - chr2.3:57301464-57301483 MS.gene55943:CDS 35.0%
! TGAGTTGTTTGGCATGTTTT+TGG + chr2.3:57300966-57300985 None:intergenic 35.0%
! TGATAGTGATTATGTTAGCC+AGG - chr2.3:57300179-57300198 MS.gene55943:CDS 35.0%
!! CGGTAAGTATTGTGCAATTT+TGG + chr2.3:57300899-57300918 None:intergenic 35.0%
!! TACGTCACATTTGAGTTGTT+TGG + chr2.3:57300977-57300996 None:intergenic 35.0%
AAACACTCCTTGGATTCAAG+GGG - chr2.3:57301491-57301510 MS.gene55943:CDS 40.0%
AAGGCATATACTTCTGTGTG+TGG - chr2.3:57300212-57300231 MS.gene55943:CDS 40.0%
ACCAACAAGCTCAGCAATTT+GGG - chr2.3:57301403-57301422 MS.gene55943:intron 40.0%
ACTCCAGAGAATAGTAGCAA+TGG - chr2.3:57301258-57301277 MS.gene55943:intron 40.0%
ATATACTTCTGTGTGTGGTG+GGG - chr2.3:57300217-57300236 MS.gene55943:CDS 40.0%
ATCTGGATTGTTCCCTCAAA+TGG - chr2.3:57301449-57301468 MS.gene55943:CDS 40.0%
ATGGGCCACCTATAGTTATA+TGG + chr2.3:57300273-57300292 None:intergenic 40.0%
ATTTGAGGGAACAATCCAGA+TGG + chr2.3:57301450-57301469 None:intergenic 40.0%
CAAACACTCCTTGGATTCAA+GGG - chr2.3:57301490-57301509 MS.gene55943:CDS 40.0%
CATATACTTCTGTGTGTGGT+GGG - chr2.3:57300216-57300235 MS.gene55943:CDS 40.0%
CTGCATCATCGGATTCATTT+GGG - chr2.3:57301289-57301308 MS.gene55943:intron 40.0%
CTTGAACTTCATAGTCGTTG+GGG - chr2.3:57300588-57300607 MS.gene55943:intron 40.0%
GATCCAACTCATCATCACTT+TGG + chr2.3:57299771-57299790 None:intergenic 40.0%
GTGGCCCATATATAATTGCT+TGG - chr2.3:57300284-57300303 MS.gene55943:CDS 40.0%
GTTATAGGACTCAAACGAAC+GGG - chr2.3:57300480-57300499 MS.gene55943:intron 40.0%
TACCAACAAGCTCAGCAATT+TGG - chr2.3:57301402-57301421 MS.gene55943:intron 40.0%
TGAAACAAGACGAGAAGTGA+AGG + chr2.3:57300094-57300113 None:intergenic 40.0%
TGGTGAACCATTATTAGTGG+CGG + chr2.3:57301097-57301116 None:intergenic 40.0%
TTTGAGGGAACAATCCAGAT+GGG + chr2.3:57301449-57301468 None:intergenic 40.0%
!!! GTTTGGCATGTTTTTGGACA+CGG + chr2.3:57300960-57300979 None:intergenic 40.0%
!!! TTTGGCATGTTTTTGGACAC+GGG + chr2.3:57300959-57300978 None:intergenic 40.0%
ACCCAAATTGCTGAGCTTGT+TGG + chr2.3:57301407-57301426 None:intergenic 45.0%
ATCTCGTTGTCTGTTCTTCC+CGG + chr2.3:57300919-57300938 None:intergenic 45.0%
ATGTTACCACGACGAACATC+TGG + chr2.3:57300543-57300562 None:intergenic 45.0%
CAAATCATGGTGAAGGTCGA+TGG - chr2.3:57299845-57299864 MS.gene55943:CDS 45.0%
CCAAACACTCCTTGGATTCA+AGG - chr2.3:57301489-57301508 MS.gene55943:CDS 45.0%
GAGAGCAAGATCTTCATCGA+CGG + chr2.3:57299812-57299831 None:intergenic 45.0%
GCAAGAGCTGTAGATTGAGA+TGG - chr2.3:57300502-57300521 MS.gene55943:intron 45.0%
GCATATACTTCTGTGTGTGG+TGG - chr2.3:57300215-57300234 MS.gene55943:CDS 45.0%
GCTGCATCATCGGATTCATT+TGG - chr2.3:57301288-57301307 MS.gene55943:intron 45.0%
GGGACACATCTGACAATTTC+TGG - chr2.3:57301511-57301530 MS.gene55943:CDS 45.0%
TCTTGAGTCAATTCCGAGAC+AGG + chr2.3:57301327-57301346 None:intergenic 45.0%
TGAACCATTATTAGTGGCGG+TGG + chr2.3:57301094-57301113 None:intergenic 45.0%
TTCACCAAGTGGTACAACAG+CGG - chr2.3:57301110-57301129 MS.gene55943:intron 45.0%
TTCATAGTCGTTGGGGAAAC+CGG - chr2.3:57300595-57300614 MS.gene55943:intron 45.0%
! GATGAGTTGGATCTTCGAAG+AGG - chr2.3:57299778-57299797 MS.gene55943:CDS 45.0%
! GCTCCAAAGTGATGATGAGT+TGG - chr2.3:57299765-57299784 MS.gene55943:CDS 45.0%
!! CCTTGAATCCAAGGAGTGTT+TGG + chr2.3:57301492-57301511 None:intergenic 45.0%
!! CTCATCATCACTTTGGAGCA+TGG + chr2.3:57299764-57299783 None:intergenic 45.0%
!!! TTTTTTTACTTTATTTAATA+CGG + chr2.3:57300384-57300403 None:intergenic 5.0%
AACACTCTTGCTCGTTCAGC+TGG - chr2.3:57299868-57299887 MS.gene55943:CDS 50.0%
AAGATGCCATGCGCTACCTT+TGG - chr2.3:57301013-57301032 MS.gene55943:intron 50.0%
AGATCTTCATCGACGGTCCA+TGG + chr2.3:57299805-57299824 None:intergenic 50.0%
ATTATTAGTGGCGGTGGCTC+GGG + chr2.3:57301088-57301107 None:intergenic 50.0%
CATTATTAGTGGCGGTGGCT+CGG + chr2.3:57301089-57301108 None:intergenic 50.0%
CCACTAACCTTGGCATCCAA+AGG + chr2.3:57301032-57301051 None:intergenic 50.0%
CCATGGAACCAAACACTCCT+TGG - chr2.3:57301481-57301500 MS.gene55943:CDS 50.0%
CCTTTGGATGCCAAGGTTAG+TGG - chr2.3:57301029-57301048 MS.gene55943:intron 50.0%
GACACAAGTTTCGCCTGTCT+CGG - chr2.3:57301311-57301330 MS.gene55943:intron 50.0%
GATGTGTCCCCTTGAATCCA+AGG + chr2.3:57301501-57301520 None:intergenic 50.0%
GATTGCATCACTAGCCCATC+TGG - chr2.3:57301432-57301451 MS.gene55943:CDS 50.0%
GCGCCATTGCTACTATTCTC+TGG + chr2.3:57301264-57301283 None:intergenic 50.0%
TGGATCTTCGAAGAGGACCA+TGG - chr2.3:57299785-57299804 MS.gene55943:CDS 50.0%
!! CCAAGGAGTGTTTGGTTCCA+TGG + chr2.3:57301484-57301503 None:intergenic 50.0%
CGAGCCACCGCCACTAATAA+TGG - chr2.3:57301087-57301106 MS.gene55943:intron 55.0%
CTTCGTCCAGATGTTCGTCG+TGG - chr2.3:57300534-57300553 MS.gene55943:intron 55.0%
GAATAGTAGCAATGGCGCCG+CGG - chr2.3:57301266-57301285 MS.gene55943:intron 55.0%
GTGACCGCTGTTGTACCACT+TGG + chr2.3:57301117-57301136 None:intergenic 55.0%
TGAATCCGATGATGCAGCCG+CGG + chr2.3:57301286-57301305 None:intergenic 55.0%
TGCGCTACCTTTGGATGCCA+AGG - chr2.3:57301022-57301041 MS.gene55943:intron 55.0%
TGGATGCGCTCCACTAACCT+TGG + chr2.3:57301042-57301061 None:intergenic 55.0%
TGGCATCCAAAGGTAGCGCA+TGG + chr2.3:57301022-57301041 None:intergenic 55.0%
! ATTAGTGGCGGTGGCTCGGG+TGG + chr2.3:57301085-57301104 None:intergenic 65.0%
CGGAGGTGGATGCGGCAGCT+TGG + chr2.3:57301062-57301081 None:intergenic 70.0%
TGGCGCCGCGGCTGCATCAT+CGG - chr2.3:57301278-57301297 MS.gene55943:intron 70.0%
!! TCGGGTGGCGGAGGTGGATG+CGG + chr2.3:57301070-57301089 None:intergenic 70.0%
! AGTGGCGGTGGCTCGGGTGG+CGG + chr2.3:57301082-57301101 None:intergenic 75.0%
!!! GGTGGCTCGGGTGGCGGAGG+TGG + chr2.3:57301076-57301095 None:intergenic 80.0%
!! GGCGGTGGCTCGGGTGGCGG+AGG + chr2.3:57301079-57301098 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 57299721 57301578 57299721 ID=MS.gene55943
chr2.3 mRNA 57299721 57301578 57299721 ID=MS.gene55943.t1;Parent=MS.gene55943
chr2.3 exon 57301410 57301578 57301410 ID=MS.gene55943.t1.exon1;Parent=MS.gene55943.t1
chr2.3 CDS 57301410 57301578 57301410 ID=cds.MS.gene55943.t1;Parent=MS.gene55943.t1
chr2.3 exon 57300683 57300812 57300683 ID=MS.gene55943.t1.exon2;Parent=MS.gene55943.t1
chr2.3 CDS 57300683 57300812 57300683 ID=cds.MS.gene55943.t1;Parent=MS.gene55943.t1
chr2.3 exon 57299721 57300408 57299721 ID=MS.gene55943.t1.exon3;Parent=MS.gene55943.t1
chr2.3 CDS 57299721 57300408 57299721 ID=cds.MS.gene55943.t1;Parent=MS.gene55943.t1
Gene Sequence

>MS.gene55943

ATGGAAGTGGAAGGAAGTGTAATAAGCAACTCGAACATCACCATGCTCCAAAGTGATGATGAGTTGGATCTTCGAAGAGGACCATGGACCGTCGATGAAGATCTTGCTCTCATCAATTACATTGCAAATCATGGTGAAGGTCGATGGAACACTCTTGCTCGTTCAGCTGGTAATTCATAACTTTTTTTCTTTCATGTATATTTTTCTAGTTTTTATGGAAGAATAATAAGAACTATATATTTATATTATGGACCACTATAGCTGTTTCATGATTGCAATTGTTGATGGAAAATCATATACTTCCACTATTTTCTTCAACGCTATGCTTGATTTCTAGCTAGTTAATTTCTATAATTGTGGTGTGAAAGCTCCTTCACTTCTCGTCTTGTTTCATCACACCAATCAATTTTTTGGAAAAAGCCAAAGTTTGCGGTTTTTTTCTTATGAAGAGCACCATATGATAGTGATTATGTTAGCCAGGACTTTAATATAAGGCATATACTTCTGTGTGTGGTGGGGCATAAATAAATTAATTATGGAAATGAAATACCATATAACTATAGGTGGCCCATATATAATTGCTTGGCTGCATCACGTTTATGAAAATAGAAAAGAATAATGAATTTGAATTTGATACTACAACGCAATATCATATATTTCCCGTATTAAATAAAGTAAAAAAAATTTGCTCTTTATTTTACTTGATTTGTTTTTGCTTGCATTCTTGAAAACTTTACCAATTGAAGAAATTTTGTTTTTGTTATAGGACTCAAACGAACGGGCAAGAGCTGTAGATTGAGATGGTTGAATTATCTTCGTCCAGATGTTCGTCGTGGTAACATCACACTTGAAGAACAACTTCTTATTCTTGAACTTCATAGTCGTTGGGGAAACCGGTAAGCAATAGATACATGCATACAAACATACACATCAAAGTTATATTATTTTGTTGCAATTAGAATACTTAAGTTATGGACTAAAATTTATTATTACAGAAAAAGAAGAAAAAAAAAAATCTTTCCAAATTCGTCGTTAAATATTAGAGACGCGAAATTAGAAATAAATTTCATTTTTTTTCTGTCTTTAATTTATTTTGGTAATTTAATCTTTCTAATTTTAAAATGTTGGTCAAATTATTGTGTCTAATTAATTATTTGATTGATCAATTAGATGGTCCAAAATTGCACAATACTTACCGGGAAGAACAGACAACGAGATCAAGAATTATTGGAGAACCCGTGTCCAAAAACATGCCAAACAACTCAAATGTGACGTAAACAGTAAGCAATTCAAAGATGCCATGCGCTACCTTTGGATGCCAAGGTTAGTGGAGCGCATCCAAGCTGCCGCATCCACCTCCGCCACCCGAGCCACCGCCACTAATAATGGTTCACCAAGTGGTACAACAGCGGTCACCACCAACAATACGACATATAACATAAACAACAATTTTGATGTTCATAGTAGCGCGAACATGTTAACCCCAACAATTATGAACACCAACAATTTATGTGGTTCACATGTTACACAACGTTATACTCCAGAGAATAGTAGCAATGGCGCCGCGGCTGCATCATCGGATTCATTTGGGACACAAGTTTCGCCTGTCTCGGAATTGACTCAAGATTATTACAATGTCCAAGTTGGTAGTAACAACAATAATAACCCTAATTCTGATTATTACCAACAAGCTCAGCAATTTGGGTTTTTTGATTGCATCACTAGCCCATCTGGATTGTTCCCTCAAATGGATTTCAGTTCCATGGAACCAAACACTCCTTGGATTCAAGGGGACACATCTGACAATTTCTGGAATGTTGAAAACATGTTACTCTTTCAACATCTCAATGACATGTGA
Protein sequence

>MS.gene55943.t1

MEVEGSVISNSNITMLQSDDELDLRRGPWTVDEDLALINYIANHGEGRWNTLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAASTSATRATATNNGSPSGTTAVTTNNTTYNINNNFDVHSSANMLTPTIMNTNNLCGSHVTQRYTPENSSNGAAAASSDSFGTQVSPVSELTQDYYNVQVGSNNNNNPNSDYYQQAQQFGFFDCITSPSGLFPQMDFSSMEPNTPWIQGDTSDNFWNVENMLLFQHLNDM